View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1254_low_77 (Length: 277)
Name: NF1254_low_77
Description: NF1254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1254_low_77 |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 22 - 248
Target Start/End: Complemental strand, 36150553 - 36150328
Alignment:
| Q |
22 |
catcatcatagtgtaagatttgtgagtgattaggaagtgttagaagctgtaaagtagtatatgaaaatgtactaaatgcatgcaatgcaactatttgatt |
121 |
Q |
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| T |
36150553 |
catcatcatagtgtaagatttgtgaatgattaggaagtgttagaagctgtaaagtagtatatgaaaatgtactaaatgcatgcaatgcaactatttgatt |
36150454 |
T |
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| Q |
122 |
tcacatcattgttacaacttacaatcagttggatgtacttttattttaatgatactaatatggttggaaaggggacgattcgtttgcatataggtttagt |
221 |
Q |
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| T |
36150453 |
tcacatcattgttacaacttacaatcagttggatgtacttttattttaatgatactaatatggttggaatggggacgattcgtttgcatataggtttagt |
36150354 |
T |
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| Q |
222 |
atttccatcaaacttggaggatgatat |
248 |
Q |
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| T |
36150353 |
atttccatc-aacttggaggatgatat |
36150328 |
T |
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