View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12551_low_16 (Length: 364)
Name: NF12551_low_16
Description: NF12551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12551_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 6 - 320
Target Start/End: Original strand, 2470375 - 2470686
Alignment:
| Q |
6 |
actttaaagataagttttattagcacacaaggaaaataatgttttcaaattcatgataat-agagtggcattatcgtacatttgttttcaaattcatgat |
104 |
Q |
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| T |
2470375 |
actttaaagataagttttattagcacacaag-aaaataatgttctta--tt--tgttaattagagtggcattatcgtacatttgttttcaaattgatgat |
2470469 |
T |
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| Q |
105 |
aatacttatattacatctaaagttatgattaatgaaatgaattaattgttttt-ctgttnnnnnnngaggggtgggaagagttatcaattaaagatacat |
203 |
Q |
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| T |
2470470 |
aatacttatattatatctaaagttatgattaatgaaatgaattaattgttttttctgttaaaaaaagaggggtgggaagagttatcaattaaagatacat |
2470569 |
T |
|
| Q |
204 |
cattttacatcttttttcgaagatattttgaattatgtcacttgaatttacaaaatcaaagtcttaccaataagttgactaatcaaactcaagtacaccc |
303 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
2470570 |
cattttacatcttttttcgaagatattttgaattatgtcacttgaatttacaaaattaaagtcttaccaataagttgactaatcaagctcaagtacaccc |
2470669 |
T |
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| Q |
304 |
agctacaacaaaactca |
320 |
Q |
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| || ||||||||||| |
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| T |
2470670 |
acttataacaaaactca |
2470686 |
T |
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