View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12551_low_31 (Length: 264)
Name: NF12551_low_31
Description: NF12551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12551_low_31 |
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Alignment Details
Target: chr5 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 31902682 - 31902929
Alignment:
| Q |
1 |
tgcctatgaactaaggttgcaaggaccaatctctccattaattatgtgtttcctacgcaattaaatcgatcaactcgaacgagaataccatacaccaaat |
100 |
Q |
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| T |
31902682 |
tgcctatgaactaaggttgcaaggaccaatctctccattaattatgtgtttcctacgtaattaaatcgatcaactcgaccgagaatatcatacaccaaat |
31902781 |
T |
|
| Q |
101 |
aaaaaagccaatcataggtaaatggtaagcagcacaaaacgtcattctaatcaagccaacacatgctacctatagccatcaatttaagcttgatgtttga |
200 |
Q |
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||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
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| T |
31902782 |
aaaaaagccaatcataggtaaatggtaagcaacacaaaatgtcattctaatcaagccaacacatgctaactatagccatcaatttatgcttgatgtttga |
31902881 |
T |
|
| Q |
201 |
ggacttaggatcatgatcatccaagtctaccagagttgattgaactgttctctg |
254 |
Q |
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|||||||| ||||||||||||||||||| | |||| ||||||||||||| |
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| T |
31902882 |
ggacttag------gatcatccaagtctaccaggggtgatggaactgttctctg |
31902929 |
T |
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