View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12559_high_27 (Length: 221)
Name: NF12559_high_27
Description: NF12559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12559_high_27 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 43800444 - 43800224
Alignment:
| Q |
1 |
aataatgttaaattggacaaagagttaaaacataatgcttaagttctgtgaatattactaaatactaactcctcttgttctctttctgcagtggttgttt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
43800444 |
aataatgttaaattggacaaagagttaaaacataatgcttaagttctgtgaatattactaaatactaactcctcttgctctctttctgcagtggttgttt |
43800345 |
T |
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| Q |
101 |
tatagctgcaagtgcatatgaagatcggctggctctgttttctatgtcaacatcaatgactgggagtgatatcattgatgaggtccaaaactactgtacc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
43800344 |
tatagctgcaagtgcatatgaagatcggctggctctgttttctatgtcaacgtcaatgactgggagtgatatcattgatgaggtccaaaactaatgtacc |
43800245 |
T |
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| Q |
201 |
atcctgtattttagaaaagcc |
221 |
Q |
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||||||||||||||||||||| |
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| T |
43800244 |
atcctgtattttagaaaagcc |
43800224 |
T |
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