View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12559_high_9 (Length: 349)

Name: NF12559_high_9
Description: NF12559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12559_high_9
NF12559_high_9
[»] chr7 (35 HSPs)
chr7 (83-338)||(5817040-5817297)
chr7 (83-340)||(23402784-23403042)
chr7 (71-340)||(20284157-20284427)
chr7 (82-320)||(3047344-3047582)
chr7 (83-277)||(2580523-2580715)
chr7 (104-280)||(9184965-9185141)
chr7 (83-320)||(2647468-2647704)
chr7 (84-320)||(29159892-29160133)
chr7 (83-280)||(9189777-9189974)
chr7 (102-320)||(33332239-33332458)
chr7 (83-320)||(46516076-46516318)
chr7 (102-248)||(4796458-4796603)
chr7 (137-320)||(9235406-9235591)
chr7 (74-222)||(2479525-2479671)
chr7 (79-231)||(47263846-47263996)
chr7 (71-234)||(21989085-21989246)
chr7 (74-195)||(44847887-44848007)
chr7 (149-244)||(49091829-49091924)
chr7 (176-320)||(56036-56183)
chr7 (149-280)||(35960947-35961078)
chr7 (71-164)||(79634-79726)
chr7 (71-167)||(49091932-49092027)
chr7 (83-234)||(21639987-21640138)
chr7 (102-204)||(18408970-18409074)
chr7 (83-204)||(18413846-18413968)
chr7 (260-340)||(28617172-28617254)
chr7 (102-204)||(21646214-21646318)
chr7 (79-170)||(43864114-43864204)
chr7 (152-234)||(21983463-21983544)
chr7 (71-170)||(6570456-6570554)
chr7 (199-282)||(45685631-45685714)
chr7 (74-181)||(48491444-48491550)
chr7 (73-135)||(30024974-30025036)
chr7 (141-170)||(12098067-12098096)
chr7 (262-322)||(41649105-41649166)
[»] chr4 (46 HSPs)
chr4 (54-322)||(5112324-5112593)
chr4 (71-320)||(5268959-5269210)
chr4 (74-321)||(39774066-39774314)
chr4 (71-320)||(10047468-10047719)
chr4 (74-285)||(6743177-6743387)
chr4 (83-320)||(25861804-25862041)
chr4 (102-320)||(42599364-42599581)
chr4 (79-243)||(3777716-3777879)
chr4 (71-320)||(16623052-16623301)
chr4 (84-243)||(3793849-3794010)
chr4 (84-243)||(24333978-24334139)
chr4 (110-325)||(1983097-1983313)
chr4 (71-243)||(16628631-16628801)
chr4 (124-340)||(18377427-18377645)
chr4 (71-339)||(36314989-36315257)
chr4 (71-339)||(36329198-36329466)
chr4 (71-234)||(5396430-5396591)
chr4 (71-236)||(8689255-8689418)
chr4 (81-314)||(38152206-38152441)
chr4 (71-247)||(54867343-54867517)
chr4 (71-234)||(5143437-5143598)
chr4 (71-234)||(5147855-5148016)
chr4 (79-234)||(31985400-31985553)
chr4 (209-321)||(34670561-34670674)
chr4 (104-321)||(37781950-37782170)
chr4 (100-170)||(6542389-6542459)
chr4 (84-170)||(51336938-51337024)
chr4 (83-234)||(28468305-28468456)
chr4 (207-320)||(39593817-39593930)
chr4 (100-170)||(4587847-4587918)
chr4 (79-170)||(9927665-9927755)
chr4 (75-153)||(37755149-37755227)
chr4 (100-170)||(48893850-48893922)
chr4 (71-170)||(5429541-5429639)
chr4 (71-170)||(26175844-26175942)
chr4 (79-170)||(52082865-52082955)
chr4 (104-166)||(6677362-6677424)
chr4 (206-321)||(873411-873527)
chr4 (262-322)||(5871832-5871894)
chr4 (264-322)||(379394-379454)
chr4 (264-301)||(13009548-13009585)
chr4 (226-314)||(18912276-18912365)
chr4 (264-322)||(36994538-36994598)
chr4 (201-280)||(36175238-36175315)
chr4 (71-119)||(36994387-36994435)
chr4 (79-135)||(52093906-52093962)
[»] chr3 (58 HSPs)
chr3 (102-340)||(3323469-3323709)
chr3 (102-280)||(1417269-1417447)
chr3 (84-320)||(25795870-25796108)
chr3 (73-243)||(40592532-40592701)
chr3 (74-320)||(24694917-24695162)
chr3 (71-244)||(47923652-47923824)
chr3 (83-340)||(3328117-3328375)
chr3 (73-339)||(21711292-21711558)
chr3 (71-244)||(1736052-1736224)
chr3 (74-339)||(8370240-8370504)
chr3 (71-320)||(8126719-8126968)
chr3 (71-320)||(40844740-40844993)
chr3 (71-320)||(48438303-48438553)
chr3 (83-280)||(37466421-37466621)
chr3 (84-243)||(3715760-3715921)
chr3 (71-243)||(36029261-36029431)
chr3 (90-243)||(47649737-47649892)
chr3 (74-266)||(25929147-25929339)
chr3 (71-234)||(27974700-27974861)
chr3 (83-340)||(21353630-21353894)
chr3 (73-234)||(27986206-27986365)
chr3 (83-285)||(26299114-26299314)
chr3 (71-236)||(16264524-16264687)
chr3 (83-193)||(4386736-4386846)
chr3 (74-236)||(39032306-39032465)
chr3 (155-320)||(18552716-18552881)
chr3 (74-234)||(33386426-33386584)
chr3 (79-234)||(26928355-26928508)
chr3 (112-243)||(35925646-35925776)
chr3 (83-236)||(6794475-6794626)
chr3 (73-234)||(27453137-27453294)
chr3 (79-211)||(37725874-37726005)
chr3 (79-234)||(32143500-32143653)
chr3 (80-170)||(23392117-23392207)
chr3 (80-170)||(23410537-23410627)
chr3 (74-191)||(27026925-27027041)
chr3 (239-322)||(4386843-4386927)
chr3 (71-244)||(30709545-30709709)
chr3 (74-191)||(27038270-27038386)
chr3 (83-234)||(1306127-1306278)
chr3 (264-322)||(760861-760921)
chr3 (209-339)||(5366209-5366342)
chr3 (247-314)||(25517077-25517145)
chr3 (74-170)||(29812928-29813023)
chr3 (74-167)||(5373088-5373180)
chr3 (82-181)||(22835199-22835297)
chr3 (71-170)||(40734360-40734458)
chr3 (181-312)||(21156526-21156658)
chr3 (264-322)||(22835096-22835156)
chr3 (208-314)||(29100255-29100363)
chr3 (143-181)||(31314378-31314416)
chr3 (264-322)||(23392003-23392063)
chr3 (264-314)||(29682373-29682425)
chr3 (264-322)||(46860488-46860548)
chr3 (264-322)||(49199564-49199624)
chr3 (265-314)||(9581297-9581348)
chr3 (263-320)||(32744532-32744590)
chr3 (71-135)||(51398676-51398740)
[»] chr2 (46 HSPs)
chr2 (90-340)||(2869469-2869722)
chr2 (84-312)||(31056141-31056371)
chr2 (83-320)||(14698780-14699016)
chr2 (74-325)||(15903651-15903902)
chr2 (71-320)||(33528383-33528629)
chr2 (71-320)||(21630032-21630283)
chr2 (83-320)||(33118225-33118461)
chr2 (83-340)||(35397580-35397837)
chr2 (102-314)||(40015020-40015232)
chr2 (71-243)||(34389018-34389189)
chr2 (74-234)||(28258939-28259097)
chr2 (71-234)||(36757521-36757682)
chr2 (113-320)||(39483020-39483230)
chr2 (84-320)||(8040151-8040392)
chr2 (102-320)||(17865292-17865513)
chr2 (83-243)||(13569496-13569655)
chr2 (100-320)||(2837814-2838038)
chr2 (84-320)||(34682102-34682342)
chr2 (102-322)||(20522307-20522530)
chr2 (102-225)||(10445256-10445379)
chr2 (81-243)||(10707021-10707182)
chr2 (71-285)||(23078230-23078442)
chr2 (208-319)||(28770669-28770781)
chr2 (81-320)||(8389918-8390158)
chr2 (85-234)||(40739011-40739158)
chr2 (148-325)||(18674235-18674414)
chr2 (84-170)||(42269609-42269697)
chr2 (226-338)||(27149207-27149321)
chr2 (100-170)||(1344331-1344402)
chr2 (104-331)||(3278079-3278307)
chr2 (71-170)||(39284747-39284845)
chr2 (112-312)||(41586349-41586549)
chr2 (83-234)||(3491929-3492080)
chr2 (91-167)||(17490353-17490429)
chr2 (119-195)||(25409846-25409924)
chr2 (71-170)||(36988283-36988381)
chr2 (223-280)||(1345451-1345508)
chr2 (264-322)||(11690515-11690575)
chr2 (264-322)||(42362366-42362426)
chr2 (262-322)||(723838-723900)
chr2 (264-320)||(14202501-14202559)
chr2 (71-135)||(6595248-6595312)
chr2 (264-322)||(11151685-11151745)
chr2 (264-322)||(14633920-14633980)
chr2 (264-322)||(24885675-24885735)
chr2 (264-322)||(34139865-34139925)
[»] chr1 (52 HSPs)
chr1 (71-340)||(22819497-22819768)
chr1 (84-320)||(40816585-40816822)
chr1 (83-340)||(47098596-47098853)
chr1 (83-273)||(47102610-47102799)
chr1 (71-314)||(13598493-13598738)
chr1 (84-320)||(19073017-19073256)
chr1 (84-320)||(19120907-19121146)
chr1 (83-280)||(32889570-32889764)
chr1 (71-285)||(29651937-29652151)
chr1 (84-319)||(47703704-47703943)
chr1 (71-236)||(3281882-3282045)
chr1 (83-314)||(9476356-9476588)
chr1 (81-234)||(37069944-37070095)
chr1 (83-235)||(27104173-27104323)
chr1 (71-234)||(13604381-13604542)
chr1 (71-266)||(9022665-9022857)
chr1 (139-244)||(16124340-16124445)
chr1 (71-236)||(21536329-21536492)
chr1 (208-321)||(35109432-35109546)
chr1 (71-236)||(26644657-26644820)
chr1 (102-234)||(19361218-19361350)
chr1 (83-234)||(19358611-19358761)
chr1 (83-234)||(19366075-19366226)
chr1 (141-272)||(11031302-11031433)
chr1 (209-314)||(17345415-17345521)
chr1 (83-234)||(24202536-24202687)
chr1 (214-321)||(32736897-32737005)
chr1 (71-170)||(10925085-10925183)
chr1 (83-166)||(17345331-17345414)
chr1 (71-170)||(3189193-3189291)
chr1 (71-170)||(3198010-3198108)
chr1 (71-170)||(3206849-3206947)
chr1 (109-170)||(4552845-4552905)
chr1 (82-170)||(197116-197203)
chr1 (209-319)||(918375-918487)
chr1 (208-320)||(10997045-10997159)
chr1 (73-170)||(31659102-31659198)
chr1 (79-167)||(28223632-28223719)
chr1 (71-170)||(3156728-3156826)
chr1 (264-320)||(8550883-8550941)
chr1 (262-322)||(31659250-31659312)
chr1 (71-170)||(44455022-44455120)
chr1 (82-181)||(50169407-50169505)
chr1 (143-181)||(777176-777214)
chr1 (261-333)||(11032268-11032342)
chr1 (263-322)||(34603589-34603650)
chr1 (208-320)||(8281407-8281520)
chr1 (264-322)||(37168311-37168371)
chr1 (104-170)||(41360807-41360875)
chr1 (264-325)||(4552728-4552791)
chr1 (265-322)||(7482325-7482384)
chr1 (79-135)||(28220468-28220524)
[»] chr8 (44 HSPs)
chr8 (73-340)||(3051188-3051457)
chr8 (71-340)||(5990321-5990590)
chr8 (71-320)||(4696367-4696615)
chr8 (104-280)||(19752185-19752360)
chr8 (71-280)||(5702239-5702449)
chr8 (100-320)||(6127310-6127535)
chr8 (73-322)||(28307648-28307899)
chr8 (71-236)||(7412515-7412678)
chr8 (100-285)||(26403013-26403201)
chr8 (79-243)||(23799343-23799506)
chr8 (116-314)||(7492976-7493175)
chr8 (74-234)||(4456205-4456363)
chr8 (90-217)||(9054197-9054324)
chr8 (224-340)||(9054748-9054866)
chr8 (79-236)||(19175521-19175676)
chr8 (83-280)||(13204562-13204750)
chr8 (83-234)||(1261721-1261872)
chr8 (84-170)||(9765622-9765709)
chr8 (209-321)||(8863521-8863633)
chr8 (124-234)||(31071036-31071147)
chr8 (249-325)||(6813767-6813845)
chr8 (71-170)||(15212648-15212746)
chr8 (71-170)||(30143204-30143302)
chr8 (71-170)||(42498056-42498154)
chr8 (73-170)||(43036287-43036383)
chr8 (79-170)||(4731528-4731618)
chr8 (83-170)||(4733683-4733769)
chr8 (83-234)||(26288069-26288220)
chr8 (83-234)||(26301326-26301477)
chr8 (83-234)||(26313320-26313471)
chr8 (104-181)||(41266862-41266940)
chr8 (264-322)||(6598986-6599046)
chr8 (264-322)||(6674439-6674499)
chr8 (82-166)||(38863743-38863827)
chr8 (264-320)||(1292559-1292617)
chr8 (72-135)||(1292705-1292768)
chr8 (264-320)||(3303766-3303824)
chr8 (223-320)||(42093089-42093188)
chr8 (104-166)||(3318761-3318823)
chr8 (218-296)||(31513237-31513314)
chr8 (224-314)||(34477133-34477221)
chr8 (264-322)||(18655414-18655474)
chr8 (104-170)||(19491906-19491974)
chr8 (252-280)||(33503780-33503808)
[»] chr5 (35 HSPs)
chr5 (21-340)||(7160612-7160932)
chr5 (83-280)||(28832387-28832583)
chr5 (74-340)||(11181594-11181861)
chr5 (102-280)||(24553316-24553494)
chr5 (83-280)||(31300366-31300562)
chr5 (98-340)||(33030724-33030969)
chr5 (84-320)||(10281840-10282080)
chr5 (83-243)||(17003730-17003889)
chr5 (71-236)||(11916731-11916894)
chr5 (104-259)||(19588896-19589051)
chr5 (71-234)||(14520407-14520568)
chr5 (80-234)||(9353100-9353252)
chr5 (114-320)||(6741941-6742148)
chr5 (71-234)||(15464711-15464872)
chr5 (71-339)||(12083936-12084203)
chr5 (176-340)||(42127273-42127439)
chr5 (80-231)||(36932116-36932265)
chr5 (100-243)||(3880467-3880612)
chr5 (188-339)||(2630300-2630453)
chr5 (83-234)||(38219577-38219728)
chr5 (102-211)||(42127159-42127268)
chr5 (102-234)||(35387841-35387974)
chr5 (71-170)||(39468757-39468855)
chr5 (74-170)||(13239617-13239712)
chr5 (218-305)||(34842707-34842795)
chr5 (262-322)||(33831692-33831754)
chr5 (73-167)||(28750866-28750959)
chr5 (208-321)||(30899955-30900068)
chr5 (71-133)||(37439010-37439072)
chr5 (181-312)||(5611239-5611371)
chr5 (71-170)||(13488065-13488163)
chr5 (262-322)||(16452092-16452154)
chr5 (264-322)||(8566040-8566100)
chr5 (252-280)||(3651630-3651658)
chr5 (71-135)||(42426477-42426541)
[»] chr6 (31 HSPs)
chr6 (83-280)||(31936707-31936901)
chr6 (83-320)||(31979602-31979838)
chr6 (84-320)||(21801113-21801352)
chr6 (79-319)||(24435739-24435978)
chr6 (83-320)||(5572014-5572249)
chr6 (100-312)||(14521770-14521986)
chr6 (102-280)||(22963829-22964007)
chr6 (102-280)||(23824386-23824564)
chr6 (102-222)||(5017285-5017405)
chr6 (74-234)||(22709187-22709345)
chr6 (76-322)||(31076699-31076951)
chr6 (81-325)||(31086243-31086486)
chr6 (71-234)||(5757237-5757398)
chr6 (208-320)||(99245-99357)
chr6 (155-320)||(18232934-18233101)
chr6 (208-321)||(1114999-1115113)
chr6 (152-244)||(4630120-4630211)
chr6 (176-320)||(10077031-10077173)
chr6 (102-170)||(21272778-21272846)
chr6 (71-159)||(18234334-18234421)
chr6 (129-226)||(21356222-21356318)
chr6 (71-149)||(10076950-10077027)
chr6 (71-170)||(9183239-9183337)
chr6 (184-305)||(30518000-30518121)
chr6 (262-322)||(22424921-22424983)
chr6 (208-321)||(33721453-33721568)
chr6 (124-234)||(5385771-5385880)
chr6 (264-322)||(2973033-2973093)
chr6 (141-170)||(3039111-3039140)
chr6 (264-322)||(28137502-28137562)
chr6 (74-134)||(23896628-23896687)
[»] scaffold0006 (3 HSPs)
scaffold0006 (71-314)||(5778-6023)
scaffold0006 (71-280)||(2623-2831)
scaffold0006 (71-234)||(133038-133199)
[»] scaffold0036 (1 HSPs)
scaffold0036 (79-243)||(85850-86013)
[»] scaffold0087 (2 HSPs)
scaffold0087 (71-234)||(36591-36752)
scaffold0087 (71-234)||(43720-43881)
[»] scaffold0148 (1 HSPs)
scaffold0148 (84-243)||(10897-11059)
[»] scaffold0140 (1 HSPs)
scaffold0140 (71-234)||(8176-8337)
[»] scaffold0078 (1 HSPs)
scaffold0078 (82-280)||(23662-23860)
[»] scaffold0098 (1 HSPs)
scaffold0098 (74-234)||(45375-45534)
[»] scaffold0176 (1 HSPs)
scaffold0176 (109-320)||(17352-17552)
[»] scaffold0016 (1 HSPs)
scaffold0016 (201-321)||(102382-102503)
[»] scaffold0188 (2 HSPs)
scaffold0188 (83-234)||(17719-17870)
scaffold0188 (83-234)||(23812-23963)
[»] scaffold0002 (1 HSPs)
scaffold0002 (216-321)||(14770-14878)
[»] scaffold0477 (1 HSPs)
scaffold0477 (100-151)||(5743-5794)
[»] scaffold0466 (1 HSPs)
scaffold0466 (262-322)||(7339-7401)
[»] scaffold0060 (1 HSPs)
scaffold0060 (113-166)||(33368-33421)


Alignment Details
Target: chr7 (Bit Score: 138; Significance: 4e-72; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 83 - 338
Target Start/End: Original strand, 5817040 - 5817297
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||| |||||||| |||||||||||| | |||||||||||| |||||||||||| || |||||||||||||||||| ||| ||||| |    
T  5817040 agagagagaaacttgggaatacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctatttggttgggaaacattgtaaataccttgggga 5817139  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag 282  Q
     |||||||||||| ||| |||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||| |    
T  5817140 gtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttttcttaggattcattgagagtgtgagtgacttgaaaaatggatagaaattagg 5817239  T
Q  283 -tctgttcttcgtgagcttttaagctaatttctagtaacccc-ttatatcactttcat 338  Q
     | ||||||| ||||||| ||| || ||||||| |||||||| || ||||||||||||    
T  5817240 ttttgttctttgtgagctcttatgcaaatttcttgtaacccctttgtatcactttcat 5817297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 83 - 340
Target Start/End: Original strand, 23402784 - 23403042
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  |||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||  || |||||||    
T  23402784 agagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgggaaacattgtaaacaccttgggta 23402882  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag 282  Q
     |||||||||||| ||| || | ||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||| |    
T  23402883 gtgagatttcaccattggaatgatcaaaaagcttccttttgtgttttctcttaggattcattgagagtgtgagtgatgtgaaaaatgggtagaaattagg 23402982  T
Q  283 tc-tgttc-ttcgtgagcttttaagctaatttctagtaaccccttatatcactttcatct 340  Q
     | ||||| || || ||||| ||||||||||||| ||||| | || || |||||||||||    
T  23402983 acttgttcttttgtaagcttataagctaatttcttgtaactcattgtaacactttcatct 23403042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 71 - 340
Target Start/End: Complemental strand, 20284427 - 20284157
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||||||  |||||| ||||||||||  || ||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  20284427 aggagagttttgagagagagaaacttggat-tataaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgggaaacattgtaa 20284329  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgg 270  Q
      || ||||||| |||||||||||| ||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||  ||||||| ||    
T  20284328 acaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattgagagtgtgggtgatatgaaaaaagg 20284229  T
Q  271 gtagaaattaagtc-tgttc-ttcgtgagcttttaagctaatttctagtaaccccttatatcactttcatct 340  Q
    |||||||||| | | ||||| || || ||||| ||||||||||||| ||||| | || || |||||||||||    
T  20284228 gtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaacgcattgtaacactttcatct 20284157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 82 - 320
Target Start/End: Complemental strand, 3047582 - 3047344
Alignment:
Q  82 aagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggt 181  Q
    ||||||| ||||||||| | |||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| | |||| |  ||||||    
T  3047582 aagagagagaaacttgggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgggaaacactataatcatcttgggt 3047483  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaa 281  Q
    | |||||||||| | ||| |||| |||||||||||||||||||||||| |||||  |||||||||||||||| ||||||| ||||||||||||||||||     
T  3047482 agtgagatttcatcattggaaggatcaaaaagcttccttttgtgttttatcttaagattcattgagagtgtgggtgactt-aaaaatgggtagaaattag 3047384  T
Q  282 gtc-tgttcttcgtgagcttttaagctaatttctagtaac 320  Q
    ||| ||||||| ||||||||||||| | |||||| |||||    
T  3047383 gtcttgttctttgtgagcttttaagttgatttcttgtaac 3047344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 83 - 277
Target Start/End: Complemental strand, 2580715 - 2580523
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  | |||| |||||||||||||| |||||||||||| | |||||||||||||||||||| |||||||||||  || |||||||    
T  2580715 agagagagaaacttggat-tgcaaaggaggtaactttagggttgagtgtctttgt-gtgaggttctcttgggttggaaaacattgtaaacaccttgggta 2580618  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaa 277  Q
     |||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||  |||||||||||||||||    
T  2580617 gtgagatttcaccattgaaaggatcaaaaagcttccttttgtgttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaa 2580523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 104 - 280
Target Start/End: Original strand, 9184965 - 9185141
Alignment:
Q  104 caaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaag 203  Q
    |||| |||||||||||||| |||||| ||||| |||| |||||||||||||||||||||||||||||  || ||||||| |||||||||||| ||| |||    
T  9184965 caaaggaggtaactttagggttgagtatctttgtagtaaggttctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaag 9185064  T
Q  204 ggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta 280  Q
    | ||||||||||||||| ||||||||||||||| ||||||| |||||||| ||||  ||||||||||||||||||||    
T  9185065 gatcaaaaagcttccttgtgtgttttctcttaggattcattaagagtgtgggtgatatgaaaaatgggtagaaatta 9185141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 83 - 320
Target Start/End: Original strand, 2647468 - 2647704
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  |||||| ||| |||||||||| |||||||||||| |||||||| |||||||||||||||||||| ||||  || |||||||    
T  2647468 agagagagaaacttggac-tacaaaggagataactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacatggtaagcaccttgggta 2647566  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag 282  Q
     |||||||||||| ||| |||| ||||||| |||| |||||||||||||||||| |||||||||||||||| |||||    ||||||||||||||||| |    
T  2647567 gtgagatttcaccattggaaggatcaaaaaacttcattttgtgttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtagaaattagg 2647664  T
Q  283 tc-tgttctt-cgtgagcttttaagctaatttctagtaac 320  Q
    || |||||||  || ||||| ||||||||||||| |||||    
T  2647665 tcttgttcttgtgtaagcttataagctaatttcttgtaac 2647704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 84 - 320
Target Start/End: Complemental strand, 29160133 - 29159892
Alignment:
Q  84 gagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaattactttgggt 181  Q
    ||||| ||||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||||||  ||||||||||||||||||  || ||||||    
T  29160133 gagagagaaacttgggaatacaaaggaggtaacttttgggttgagtgtctttatagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 29160034  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattc--attgagagtgtgagtgacttgaaaaatgggtagaaatt 279  Q
    | |||||||||| | ||| |||| ||||||||||||||||||||||||||||||| ||||  |||| ||| ||| |||||   |||||||||||||||||    
T  29160033 agtgagatttcaacattggaaggatcaaaaagcttccttttgtgttttctcttaggattcatattgtgagagtgggtgac-acaaaaatgggtagaaatt 29159935  T
Q  280 aagtc-tgttctt-cgtgagcttttaagctaatttctagtaac 320  Q
    | ||| |||||||  || ||||| ||||||||||||| |||||    
T  29159934 aggtcttgttcttgtgtaagcttgtaagctaatttcttgtaac 29159892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 83 - 280
Target Start/End: Original strand, 9189777 - 9189974
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgt-ctttatagtgaggttctcttgggttgggaaacattgtaattactttgggt 181  Q
    |||||| ||||||||||  | |||| ||| |||||||||| |||||||| |||| |||| |||||||||||||||||||||||||||||  || ||||||    
T  9189777 agagagagaaacttggat-tgcaaaggagataactttagggttgagtgttctttgtagtaaggttctcttgggttgggaaacattgtaaacaccttgggt 9189875  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta 280  Q
    | |||||||||||| ||| |||| ||||||||||||||| ||||||||||||||| ||||||| |||||||| ||||  ||||||||||||||||||||    
T  9189876 agtgagatttcaccattggaaggatcaaaaagcttccttgtgtgttttctcttaggattcattaagagtgtgggtgatatgaaaaatgggtagaaatta 9189974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 102 - 320
Target Start/End: Original strand, 33332239 - 33332458
Alignment:
Q  102 tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaa 201  Q
    |||||| |||||||||||||| |||||||| ||| |||| |||||||||||||||| ||||||||||||  |  ||||||| |||||||||||| ||| |    
T  33332239 tacaaaggaggtaactttagggttgagtgtttttgtagtaaggttctcttgggttgagaaacattgtaaacatcttgggtagtgagatttcaccattgga 33332338  T
Q  202 agggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaagtc-tgttc-ttcgtgagct 299  Q
    ||| ||||||||||||| ||||||||||||||||| | |||||||||||||| |||| |  ||||||| |||||||||| ||| ||||| || || ||||    
T  33332339 aggatcaaaaagcttccctttgtgttttctcttaggaatcattgagagtgtgcgtga-tacaaaaatgagtagaaattaggtcttgttcttttgtaagct 33332437  T
Q  300 tttaagctaatttctagtaac 320  Q
    | ||||||||||||| |||||    
T  33332438 tataagctaatttcttgtaac 33332458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 83 - 320
Target Start/End: Original strand, 46516076 - 46516318
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| ||||||| |||||||||||||||||  || |||||||    
T  46516076 agagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgagttgggaaacattgtaaacaccttgggta 46516174  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattg--agagtgtgagtgacttga---aaaatgggtagaaa 277  Q
     |||||||||||| ||| |||| |||||||||||| |||||||||||||||||  ||||||||   ||||||| |||   |||   ||||||||||||||    
T  46516175 gtgagatttcaccattggaaggatcaaaaagcttcattttgtgttttctcttaagattcattggtggagtgtgtgtg-ggtgacacaaaatgggtagaaa 46516273  T
Q  278 ttaagtc-tgttctt-cgtgagcttttaagctaatttctagtaac 320  Q
    ||| ||| |||||||  || ||||||||||||||||||| |||||    
T  46516274 ttatgtcttgttcttgtgtaagcttttaagctaatttcttgtaac 46516318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 102 - 248
Target Start/End: Original strand, 4796458 - 4796603
Alignment:
Q  102 tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaa 201  Q
    |||||| |||||||||||||| |||||||||||| |||||||| ||||||||||||| |||||||||||  || ||||||| |||||||||||| ||| |    
T  4796458 tacaaaggaggtaactttagg-ttgagtgtctttgtagtgaggatctcttgggttggaaaacattgtaaacaccttgggtagtgagatttcaccattgga 4796556  T
Q  202 agggtcaaaaagcttccttttgtgttttctcttagaattcattgaga 248  Q
    ||| |||||||||||| |||||||||||||||||| |||||||||||    
T  4796557 aggatcaaaaagcttctttttgtgttttctcttaggattcattgaga 4796603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 137 - 320
Target Start/End: Original strand, 9235406 - 9235591
Alignment:
Q  137 tagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttag 236  Q
    ||||||| ||||||||||||||||||||||||||  || |||| || ||| |||||||| ||| |||| |||||||||||||||||||||||||||||||    
T  9235406 tagtgagattctcttgggttgggaaacattgtaaacaccttggatagtgatatttcaccattgcaaggatcaaaaagcttccttttgtgttttctcttag 9235505  T
Q  237 aattcattgagagtgtgagtgacttgaaaaatgggtagaaattaagtc-tgttc-ttcgtgagcttttaagctaatttctagtaac 320  Q
     |||| ||||||||| | ||||  |||||||||||||||||||| | | ||||| || || ||||| ||||||||||||| |||||    
T  9235506 gattcgttgagagtgcgggtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttcttgtaac 9235591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 74 - 222
Target Start/End: Complemental strand, 2479671 - 2479525
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatta 173  Q
    |||| |||||||||| ||||||||||  |||||| |||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||  |    
T  2479671 agagcttgaagagagagaaacttggat-tacaaaggagggaactttagggttgagtgtctttatagtgaggatctcttgggttgggaaacattgtaaaca 2479573  T
Q  174 ctttgggtaatgagatttcaccgttgaaagggtcaaaaagcttcctttt 222  Q
    | ||||||| |||||||||||| ||| |||| || ||||||||||||||    
T  2479572 ccttgggtagtgagatttcaccattggaaggatc-aaaagcttcctttt 2479525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 79 - 231
Target Start/End: Complemental strand, 47263996 - 47263846
Alignment:
Q  79 ttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttg 178  Q
    |||||||||| ||||||||||  || ||| |||||||||||||| |||||||||||| |||||||  |||||| |||||||||||||||||| ||| |||    
T  47263996 ttgaagagagagaaacttggat-tataaaggaggtaactttagggttgagtgtctttgtagtgagaatctcttcggttgggaaacattgtaaataccttg 47263898  T
Q  179 ggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttct 231  Q
    |||| |||||||||||| ||| |||| || |||||||||||||||||| ||||    
T  47263897 ggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttct 47263846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 71 - 234
Target Start/End: Complemental strand, 21989246 - 21989085
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||| ||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||    
T  21989246 aggagagcttgaagtgagagaaacttggat-tacaaaggaggtaactttaggtttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaa 21989148  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
      || ||||||| |||||||| ||| ||| |||| || | |||||||||||  |||||||||||    
T  21989147 acaccttgggtagtgagattttaccattggaaggatc-ataagcttcctttattgttttctctt 21989085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 74 - 195
Target Start/End: Original strand, 44847887 - 44848007
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatta 173  Q
    |||| |||||||||| ||||||||||  || ||| |||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||  |    
T  44847887 agagcttgaagagagagaaacttggat-tataaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaaca 44847985  T
Q  174 ctttgggtaatgagatttcacc 195  Q
    | |||| || ||||||||||||    
T  44847986 ccttggatagtgagatttcacc 44848007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 49091924 - 49091829
Alignment:
Q  149 cttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcatt 244  Q
    ||||||||||||||||||| ||  || ||||||| |||||||||||| ||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  49091924 cttgggttgggaaacattgaaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcatt 49091829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 320
Target Start/End: Complemental strand, 56183 - 56036
Alignment:
Q  176 ttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattc---attgagagtgtgagtgacttgaaaaatgggt 272  Q
    ||||||| |||||||||||| ||| |||| |||||||||||| |||||||||||||||||| ||||   |||||||||||| |||||    |||||||||    
T  56183 ttgggtagtgagatttcaccattggaaggatcaaaaagcttctttttgtgttttctcttaggattcattattgagagtgtgggtgac--acaaaatgggt 56086  T
Q  273 agaaattaagtc-tgttctt-cgtgagcttttaagctaatttctagtaac 320  Q
    |||||||| ||| |||||||  || ||||| ||||||||||||| |||||    
T  56085 agaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaac 56036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 280
Target Start/End: Complemental strand, 35961078 - 35960947
Alignment:
Q  149 cttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcat-tgag 247  Q
    ||||||||||||||||||||||  || || |||| |||||||||||| ||| |||| |||||||||||||||||| |||||||||||  |||||| |  |    
T  35961078 cttgggttgggaaacattgtaaacaccttaggtagtgagatttcaccattggaaggatcaaaaagcttccttttgcgttttctcttaagattcatctttg 35960979  T
Q  248 agtgtgagtgacttgaaaaatgggtagaaatta 280  Q
    |||||| ||||  || |||||||||||||||||    
T  35960978 agtgtgggtgatatg-aaaatgggtagaaatta 35960947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 164
Target Start/End: Complemental strand, 79726 - 79634
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaaca 164  Q
    ||||||| |||||||||| ||||||||||  |||||| |||||||||||| |||||||||||||| |||||||| ||| ||||||||| |||||    
T  79726 aggagagcttgaagagagagaaacttggat-tacaaaggaggtaactttaagattgagtgtctttgtagtgaggatcttttgggttggaaaaca 79634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 49092027 - 49091932
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattg 167  Q
    ||||||| |||||||||| ||||||||||  |||||| |||||||||||| | |||||||||||| || ||||| | ||||||||||||||||||||    
T  49092027 aggagagcttgaagagagagaaacttggat-tacaaaggaggtaactttaaggttgagtgtctttgtactgaggatatcttgggttgggaaacattg 49091932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 83 - 234
Target Start/End: Complemental strand, 21640138 - 21639987
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttggg--aaacattgtaattactttggg 180  Q
    |||||| ||||||||||  |||||| |||| |||| |||| |||||||||||| ||| |||| ||||||||||||||  |||||||||||  || |||||    
T  21640138 agagagagaaacttggat-tacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaacaccttggg 21640040  T
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    || |||||||||||| ||| |||| ||  |||||||||| | |||| |||||||    
T  21640039 tagtgagatttcaccattggaaggatc-taaagcttcctctagtgtcttctctt 21639987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 18409074 - 18408970
Alignment:
Q  102 tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttggg--aaacattgtaattactttgggtaatgagatttcaccgttg 199  Q
    |||||| |||| |||| |||| |||||||||||| |||||||| ||||||||||||||  |||||||||||  || ||||||| |||||||||||| ||     
T  18409074 tacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccatta 18408975  T
Q  200 aaagg 204  Q
    |||||    
T  18408974 aaagg 18408970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 18413968 - 18413846
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttggg--aaacattgtaattactttggg 180  Q
    |||||| ||||||||||  |||||| |||| |||| |||| |||||||||||| |||||||| ||||||||||||||  ||||| |||||  || |||||    
T  18413968 agagagagaaacttggat-tacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacaatgtaaacaccttggg 18413870  T
Q  181 taatgagatttcaccgttgaaagg 204  Q
    || |||||||||||| ||| ||||    
T  18413869 tagtgagatttcaccattggaagg 18413846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 340
Target Start/End: Original strand, 28617172 - 28617254
Alignment:
Q  260 ttgaaaaatgggtagaaattaagtct-gttcttcgtgagcttttaagctaatttctagtaacccc-ttatatcactttcatct 340  Q
    ||||||||| ||||||||||| || | |||||| |||||||||||||||||||||| |||||||| || ||||||||||||||    
T  28617172 ttgaaaaataggtagaaattaggttttgttctttgtgagcttttaagctaatttcttgtaaccccattgtatcactttcatct 28617254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 21646318 - 21646214
Alignment:
Q  102 tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttggg--aaacattgtaattactttgggtaatgagatttcaccgttg 199  Q
    |||||| |||| |||| |||| |||||||||||| ||| |||| ||||||||||||||  |||||||||||  || ||||||| |||||||||||| |||    
T  21646318 tacaaaggaggaaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattg 21646219  T
Q  200 aaagg 204  Q
     ||||    
T  21646218 gaagg 21646214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 43864114 - 43864204
Alignment:
Q  79 ttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    |||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | | | |||||||||||||||||||||||||||    
T  43864114 ttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-gattaaagttctcttgggttgggaaacattgtaa 43864204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 234
Target Start/End: Complemental strand, 21983544 - 21983463
Alignment:
Q  152 gggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    |||| ||||||||||||||  || ||||||| |||||||||||| ||| |||| || | ||||||||||||||||||||||||    
T  21983544 gggtggggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-ataagcttccttttgtgttttctctt 21983463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 6570456 - 6570554
Alignment:
Q  71 aggagagtttgaagagagggaaacttg-gaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgta 169  Q
    ||||||| || ||||| || ||||||| ||||| |||| |||||||||||||||||||||||||||  | |  |||||||||||| ||||||||||||||    
T  6570456 aggagagcttaaagaggggaaaacttgagaaat-caaaggaggtaactttaggattgagtgtcttt-gactagggttctcttggggtgggaaacattgta 6570553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 45685631 - 45685714
Alignment:
Q  199 gaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag 282  Q
    |||||| | ||||| ||| ||||  ||||||||||||| |||||||| || | |||||||||| |||||||| |||||||||||    
T  45685631 gaaaggataaaaaaactttctttcttgttttctcttaggattcattgcgactttgagtgacttaaaaaatggatagaaattaag 45685714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 181
Target Start/End: Original strand, 48491444 - 48491550
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatta 173  Q
    |||| |||||||||| ||||||||  ||  |||| |||||||||||||| ||||| ||||||     ||| ||||||||||||||||||||||||||  |    
T  48491444 agaggttgaagagagagaaacttgataaatcaaaggaggtaactttagggttgagggtctttgattagag-ttctcttgggttgggaaacattgtaaaca 48491542  T
Q  174 ctttgggt 181  Q
    ||||||||    
T  48491543 ctttgggt 48491550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 30025036 - 30024974
Alignment:
Q  73 gagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtcttt 135  Q
    ||||| |||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||    
T  30025036 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt 30024974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 170
Target Start/End: Complemental strand, 12098096 - 12098067
Alignment:
Q  141 gaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||||||||||||||||||||||||||    
T  12098096 gaggttctcttgggttgggaaacattgtaa 12098067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 41649166 - 41649105
Alignment:
Q  262 gaaaaatgggtagaaattaagtctgttcttcgtgagctt-ttaagctaatttctagtaaccc 322  Q
    ||||||| ||||||||||| || ||||||| |||||||| || ||||||||||| |||||||    
T  41649166 gaaaaattggtagaaattaggtttgttctttgtgagcttgtttagctaatttcttgtaaccc 41649105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 4e-72; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 54 - 322
Target Start/End: Complemental strand, 5112593 - 5112324
Alignment:
Q  54 cacaattaagttttattaggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgg 153  Q
    ||||||| |||||| ||||||||| |||||||||| ||||||||  | |||||| ||||||| |||||| |||||||||||| | |||||||||||||||    
T  5112593 cacaattcagtttttttaggagagcttgaagagagagaaacttgagattacaaaggaggtaattttaggtttgagtgtctttgttgtgaggttctcttgg 5112494  T
Q  154 gttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtg 253  Q
    |||||||||||||||||  || ||||||| |||||||||||| ||| |||| ||||||||||||||||| ||||||||||||| |||||||| |||||||    
T  5112493 gttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttatgttttctcttaggattcattgtgagtgtg 5112394  T
Q  254 agtgacttgaaaaatgggtagaaattaagtct-gttcttcgtgagcttttaagctaatttctagtaaccc 322  Q
    |||||||| |||||| |||| |||||| |||| ||| ||  |||| |||||||||||||||| |||||||    
T  5112393 agtgacttaaaaaataggtacaaattaggtctcgttttttatgagtttttaagctaatttcttgtaaccc 5112324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 71 - 320
Target Start/End: Original strand, 5268959 - 5269210
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||    
T  5268959 aggagagcttgaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaa 5269057  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattc---attgagagtgtgagtgacttgaaaaa 267  Q
      || |||| || |||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||   |||||||||||| |||||    | ||    
T  5269058 acaccttggatagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattattgagagtgtgggtgac--acacaa 5269155  T
Q  268 tgggtagaaattaagtc-tgttctt-cgtgagcttttaagctaatttctagtaac 320  Q
    ||||||||||||| ||| |||||||  || ||||| ||||||||||||| |||||    
T  5269156 tgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaac 5269210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 74 - 321
Target Start/End: Original strand, 39774066 - 39774314
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatta 173  Q
    ||||||| ||||||| |||||||||   |||||| |||||||||||||| |||||  | ||| ||  |||||||||||| |||||||||||||||||  |    
T  39774066 agagtttaaagagagagaaacttgggtttacaaaggaggtaactttagggttgagattatttgtaacgaggttctcttgagttgggaaacattgtaaaca 39774165  T
Q  174 ctttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggta 273  Q
    | ||||||| |||| ||||||| ||| || | ||||||||||||||||||| ||||||||| | |||||||||||||||||||||| || ||||| ||||    
T  39774166 ccttgggtagtgagttttcaccattggaatgatcaaaaagcttccttttgtattttctcttgggattcattgagagtgtgagtgacatg-aaaattggta 39774264  T
Q  274 gaaattaagtct--gttcttcgtgagcttttaagctaatttctagtaacc 321  Q
    ||||||| ||||   ||||| |||||||||||||||||||||| ||||||    
T  39774265 gaaattaggtcttgtttctttgtgagcttttaagctaatttcttgtaacc 39774314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 71 - 320
Target Start/End: Complemental strand, 10047719 - 10047468
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||||  |||||| |||||||||||||| |||||||||||| || ||||| |||||||||||||||||||||||||    
T  10047719 aggagagcttgaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtaatgaggatctcttgggttgggaaacattgtaa 10047621  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattc---attgagagtgtgagtgacttgaaaaa 267  Q
      || ||||||| |||||||||||| ||| |||| ||||||| |||||||||||||||| |||||| ||||   |||||||||||| |||||    ||||    
T  10047620 acaccttgggtagtgagatttcaccattggaaggatcaaaaaacttccttttgtgttttgtcttaggattcattattgagagtgtgggtgac--acaaaa 10047523  T
Q  268 tgggtagaaattaagtc-tgttctt-cgtgagcttttaagctaatttctagtaac 320  Q
    ||||||||||||| ||| |||||||  || ||||| ||||||||||||| |||||    
T  10047522 tgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaac 10047468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 74 - 285
Target Start/End: Original strand, 6743177 - 6743387
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatta 173  Q
    |||| |||||||||| ||||||||||  |||||| |||||||||| ||| |||||||||||| ||| |||| |||||||||||||||||||||||||  |    
T  6743177 agagcttgaagagagagaaacttggat-tacaaaggaggtaacttgaggtttgagtgtctttgtagcgaggatctcttgggttgggaaacattgtaaaca 6743275  T
Q  174 ctttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattc---attgagagtgtgagtgacttgaaaaatgg 270  Q
    | |||||||||||||||||||| ||| |||| ||||||| ||||||||||||||||||||||| ||||   |||||||||||| |||||    |||||||    
T  6743276 ccttgggtaatgagatttcaccattggaaggatcaaaaa-cttccttttgtgttttctcttaggattcattattgagagtgtgggtgac--acaaaatgg 6743372  T
Q  271 gtagaaattaagtct 285  Q
    |||||||||| ||||    
T  6743373 gtagaaattaggtct 6743387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 83 - 320
Target Start/End: Original strand, 25861804 - 25862041
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  ||||||  ||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||  || ||| |||    
T  25861804 agagagagaaacttggat-tacaaagaaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgagta 25861902  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtg-ttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaa 281  Q
     |||||||||||| ||| |||| ||||||| |||||||||||| ||||||||||| |||||||||||||||| |||||    ||||||||||| |||||     
T  25861903 gtgagatttcaccattggaaggatcaaaaaacttccttttgtgtttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtaggaattag 25862000  T
Q  282 gtc-tgttctt-cgtgagcttttaagctaatttctagtaac 320  Q
    ||| |||||||  || ||||| ||||||||||||| |||||    
T  25862001 gtcttgttcttgtgtaagcttataagctaatttcttgtaac 25862041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 102 - 320
Target Start/End: Original strand, 42599364 - 42599581
Alignment:
Q  102 tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaa 201  Q
    |||||| |||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||| |||  || ||||||| |||||||||||| ||| |    
T  42599364 tacaaaggaggtaactttagg-ttgagtgtctttgtagtgaggttctcttcggttgggaaacattctaaacaccttgggtagtgagatttcaccattgga 42599462  T
Q  202 agggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaagtc-tgttc-ttcgtgagct 299  Q
    ||| | ||||| ||||||||||||||||||||||| |||||||||||||| | |||||    ||||||||||||||||| ||| ||||| || || ||||    
T  42599463 aggataaaaaaacttccttttgtgttttctcttaggattcattgagagtgcgggtgac--acaaaatgggtagaaattaggtcttgttcttttgtaagct 42599560  T
Q  300 tttaagctaatttctagtaac 320  Q
    | ||||||||||||| |||||    
T  42599561 tataagctaatttcttgtaac 42599581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 79 - 243
Target Start/End: Complemental strand, 3777879 - 3777716
Alignment:
Q  79 ttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttg 178  Q
    |||||||||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||  || |||    
T  3777879 ttgaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttg 3777781  T
Q  179 ggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcat 243  Q
    |||| |||||||||||| ||| || | ||||||||||||||||||| ||||||||||| ||||||    
T  3777780 ggtagtgagatttcaccattggaatgatcaaaaagcttccttttgtattttctcttaggattcat 3777716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 71 - 320
Target Start/End: Original strand, 16623052 - 16623301
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| | |||||||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||    
T  16623052 aggagagctagaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaa 16623150  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattc--attgagagtgtgagtgacttgaaaaat 268  Q
      || ||||||| |||||||||||| ||| |||| || ||||||||||||||||||||||| |||| ||||  |||| ||| ||| |||||    |||||    
T  16623151 acaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgttttcttttaggattcatattgtgagagtgggtgac--acaaaat 16623247  T
Q  269 gggtagaaattaagtc-tgttcttc-gtgagcttttaagctaatttctagtaac 320  Q
    |||||||||||| ||| |||||||| || ||||| | ||||||||||| |||||    
T  16623248 gggtagaaattaggtcttgttcttctgtaagcttattagctaatttcttgtaac 16623301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 84 - 243
Target Start/End: Original strand, 3793849 - 3794010
Alignment:
Q  84 gagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaattactttgggt 181  Q
    ||||| ||||||||| |||| ||| |||||||||||||| |||||||||||||||||||||||||||||  |||||| |||||||||||  || ||||||    
T  3793849 gagagagaaacttgggaatataaaggaggtaactttagggttgagtgtctttatagtgaggttctcttgagggttggaaaacattgtaaacaccttgggt 3793948  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcat 243  Q
    | |||||||||||| | |||||| ||||||||||||||||||||||| ||||||| ||||||    
T  3793949 agtgagatttcaccatagaaaggatcaaaaagcttccttttgtgtttgctcttaggattcat 3794010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 84 - 243
Target Start/End: Complemental strand, 24334139 - 24333978
Alignment:
Q  84 gagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaattactttgggt 181  Q
    ||||| ||||||||| ||||||||  ||||||||||||| ||||| |||||| ||||||||||||||||  ||||||||||||||||||  || ||||||    
T  24334139 gagagagaaacttgggaatacaaagaaggtaactttagggttgagagtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 24334040  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcat 243  Q
    | |||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  24334039 agtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 24333978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 110 - 325
Target Start/End: Original strand, 1983097 - 1983313
Alignment:
Q  110 aggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgaga-tttcaccgttgaaagggtca 208  Q
    ||||||||||||| |||||||||||| |||||||||| |||||||||| | ||||||||||  ||  ||| || | ||| ||||||| ||| |||| | |    
T  1983097 aggtaactttagggttgagtgtctttgtagtgaggttatcttgggttgtgtaacattgtaaacaccctggttagtaagattttcaccattggaaggataa 1983196  T
Q  209 aaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag-tctgttcttcgtgagcttttaagct 307  Q
    ||||||||||||||| |||||||||||| |||||||||||||||  ||||||||||||| || ||||||||| | | ||||||| ||||||||  |||||    
T  1983197 aaaagcttccttttgggttttctcttaggattcattgagagtgtaggtgacttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagct 1983295  T
Q  308 aatttctagtaacccctt 325  Q
    ||||||| ||||||||||    
T  1983296 aatttcttgtaacccctt 1983313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 16628631 - 16628801
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| | |||||||| |||| |||||  | |||| |||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||    
T  16628631 aggagagctagaagagagagaaaattggat-tgcaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaa 16628729  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcat 243  Q
      || ||||||| |||||||||||| ||| |||| || ||||||||||||||||||||||| |||| ||||||    
T  16628730 acaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgttttcttttaggattcat 16628801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 124 - 340
Target Start/End: Complemental strand, 18377645 - 18377427
Alignment:
Q  124 ttgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttg 223  Q
    |||||||| ||| |||||||||||||||||| ||| |||||||||||   | |||||||||||||||| ||| ||| |||| |||||||||||| |||||    
T  18377645 ttgagtgtatttgtagtgaggttctcttgggatggaaaacattgtaaaccccttgggtaatgagattttaccattggaaggatcaaaaagcttcattttg 18377546  T
Q  224 tgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaagtct--gttcttcgtgagcttttaagctaatttctagtaacc 321  Q
    |||||| |||||| ||||||||  |||||| ||||| || ||||||||||||||||| | ||   ||||| ||||||||||||||| ||||||  |||||    
T  18377545 tgttttttcttaggattcattgtaagtgtgggtgacatg-aaaatgggtagaaattagggcttgtttctttgtgagcttttaagctgatttcttataacc 18377447  T
Q  322 c-cttatatcactttcatct 340  Q
    |  || ||||||||||||||    
T  18377446 catttgtatcactttcatct 18377427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 71 - 339
Target Start/End: Original strand, 36314989 - 36315257
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| ||||||||||  |||||||||  |||||| |||||||||||||| || ||||||||| ||| |||| |||||||||||||||||||||||||    
T  36314989 aggagagcttgaagagagataaacttggat-tacaaaggaggtaactttagggtttagtgtctttgtagagaggatctcttgggttgggaaacattgtaa 36315087  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcatt---gagagtgtgagtgacttgaaaaa 267  Q
      || ||||||| |||||||| ||| ||| |||| |||||| ||||||||||||||||| || ||| |||||||   ||||||||| || ||   | |||    
T  36315088 acacattgggtagtgagatttaaccattggaaggatcaaaa-gcttccttttgtgttttttcgtaggattcattattgagagtgtgggtaac---acaaa 36315183  T
Q  268 tgggtagaaattaagtct-gttcttc-gtgagcttttaagctaatttctagtaaccccttatatcactttcatc 339  Q
    ||||||||||||| |||| | ||||  || ||||| ||||||||||||| ||||| | || || ||||||||||    
T  36315184 tgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactctttgtaacactttcatc 36315257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 71 - 339
Target Start/End: Original strand, 36329198 - 36329466
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| ||||||||||  |||||||||  |||||| |||||||||||||| || ||||||||| ||| |||| |||||||||||||||||||||||||    
T  36329198 aggagagcttgaagagagataaacttggat-tacaaaggaggtaactttagggtttagtgtctttgtagagaggatctcttgggttgggaaacattgtaa 36329296  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcatt---gagagtgtgagtgacttgaaaaa 267  Q
      || ||||||| |||||||| ||| ||| |||| |||||| ||||||||||||||||| || ||| |||||||   ||||||||| || ||   | |||    
T  36329297 acacattgggtagtgagatttaaccattggaaggatcaaaa-gcttccttttgtgttttttcgtaggattcattattgagagtgtgggtaac---acaaa 36329392  T
Q  268 tgggtagaaattaagtct-gttcttc-gtgagcttttaagctaatttctagtaaccccttatatcactttcatc 339  Q
    ||||||||||||| |||| | ||||  || ||||| ||||||||||||| ||||| | || || ||||||||||    
T  36329393 tgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactctttgtaacactttcatc 36329466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 71 - 234
Target Start/End: Original strand, 5396430 - 5396591
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| | |||||||| ||||||||||  |||||| ||||| |||||||| |||||||||||| |||||||| |||||||||||||||||||||||||    
T  5396430 aggagagctggaagagagagaaacttggat-tacaaaggaggttactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaa 5396528  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
      || ||||||| |||||||||||| ||| |||  || |||||||| ||||||||| |||||||    
T  5396529 acaccttgggtagtgagatttcaccattggaagaatc-aaaagctttcttttgtgtcttctctt 5396591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 8689255 - 8689418
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||| ||| ||||||||||  |||||| |||||||||||||| || ||||||||| |||||||| ||||||||||||||||||||| |||    
T  8689255 aggagagcttgaagtgagagaaacttggat-tacaaaggaggtaactttagggtttagtgtctttgtagtgaggatctcttgggttgggaaacattttaa 8689353  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttag 236  Q
      || |||| || |||||||||||| ||| |||| || ||||| |||||||||||| |||||||||    
T  8689354 acaccttggatagtgagatttcaccattggaaggatc-aaaagtttccttttgtgtcttctcttag 8689418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 81 - 314
Target Start/End: Original strand, 38152206 - 38152441
Alignment:
Q  81 gaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttggg 180  Q
    |||||||| |||| || | | |||||| |||||||||||||| |||||||||||| |||||||| ||||||||| ||||||| |||||||  || |||||    
T  38152206 gaagagagagaaaatttggattacaaatgaggtaactttagggttgagtgtctttgtagtgaggatctcttgggatgggaaatattgtaaacaccttggg 38152305  T
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattc---attgagagtgtgagtgacttgaaaaatgggtagaaa 277  Q
    || ||| | |||||| ||| |||| || |||||||||| ||||||||||||||||| ||||   |||||||||||| |||||    ||||| ||||||||    
T  38152306 tagtgacaattcaccattggaaggatc-aaaagcttccatttgtgttttctcttaggattcattattgagagtgtgggtgac--acaaaattggtagaaa 38152402  T
Q  278 ttaagtc-tgttctt-cgtgagcttttaagctaatttct 314  Q
    ||| ||| |||||||  || ||||| |||||||||||||    
T  38152403 ttaggtcttgttcttgtgtaagcttataagctaatttct 38152441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 71 - 247
Target Start/End: Complemental strand, 54867517 - 54867343
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||  ||||||||||||| |    ||||||    
T  54867517 aggagagcttgaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgagaatctcttgggttggaag---ttgtaa 54867422  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttcc--ttttgtgttttctcttagaattcattgag 247  Q
      ||| |||||| |||||||||||| ||| |||| ||||||||||| |  |||||||||||||||||| ||||||||||    
T  54867421 acactatgggtagtgagatttcaccattggaaggatcaaaaagctttcttttttgtgttttctcttaggattcattgag 54867343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 71 - 234
Target Start/End: Complemental strand, 5143598 - 5143437
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| ||||||  || ||||||||||  |||| | |||||||||||||| |||||||||||| |||||||| |||||||| ||||||||| ||||||    
T  5143598 aggagagcttgaagtaagagaaacttggat-tacagaggaggtaactttagggttgagtgtctttgtagtgaggatctcttggattgggaaactttgtaa 5143500  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
      || || |||| |||||||||||| ||| |||| || | ||||||||||||||||||||||||    
T  5143499 acaccttaggtagtgagatttcaccattggaaggatc-ataagcttccttttgtgttttctctt 5143437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 71 - 234
Target Start/End: Complemental strand, 5148016 - 5147855
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||  ||| ||||||||||  |||| | |||||||||||||| || ||||||||| |||| ||| ||||||| |||||||||||||||||    
T  5148016 aggagagcttgaaatgagagaaacttggat-tacacaggaggtaactttagggtttagtgtctttgtagtaaggatctcttgagttgggaaacattgtaa 5147918  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
      || |||| ||||||||||||||| ||| |||| || | ||||||||||||||||||||||||    
T  5147917 acacattggataatgagatttcaccattggaaggatc-ataagcttccttttgtgttttctctt 5147855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 79 - 234
Target Start/End: Original strand, 31985400 - 31985553
Alignment:
Q  79 ttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttg 178  Q
    |||||||||| ||||||||||  |||||| |||| ||||||||| |||||||| ||| || ||||| |||||||||||||||||||||||||  || |||    
T  31985400 ttgaagagagagaaacttggat-tacaaaggagggaactttagggttgagtgtttttgtattgaggatctcttgggttgggaaacattgtaaacaccttg 31985498  T
Q  179 ggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    |||| ||| |||||||| | | |||| || |||||||||||||||||| |||||||    
T  31985499 ggtagtgaaatttcaccatgggaaggatc-aaaagcttccttttgtgtcttctctt 31985553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 209 - 321
Target Start/End: Original strand, 34670561 - 34670674
Alignment:
Q  209 aaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag-tctgttcttcgtgagcttttaagct 307  Q
    ||||| || |||| |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||| | | ||||||| ||||||| |||||||    
T  34670561 aaaagttttctttagtgttttctcttaggattcattgtgagtgtgagtgacttgaaaaatggatagaaattatgatttgttctttgtgagctattaagct 34670660  T
Q  308 aatttctagtaacc 321  Q
    ||||||| ||||||    
T  34670661 aatttcttgtaacc 34670674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 104 - 321
Target Start/End: Complemental strand, 37782170 - 37781950
Alignment:
Q  104 caaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacatt-gtaattactttgggtaatgagatttcaccgttgaaa 202  Q
    |||| |||||||||||||  |||| | |||||   | |||| ||||||||||||| ||||||| ||||  || ||||||| ||||||||||   ||| ||    
T  37782170 caaatgaggtaactttagagttgaatatctttggtgagaggctctcttgggttggaaaacatttgtaaacaccttgggtagtgagatttcattattggaa 37782071  T
Q  203 gggtcaaaaagcttccttttgtgttttctcttagaattcattga-gagtgtgagtgacttgaaaaatgggtagaaattaag-tctgttcttcgtgagctt 300  Q
    |  ||||||||  || ||| |||||||||||||  ||||||| | ||||||  |||||||||||||||||||||||||||| | ||||||| ||||| ||    
T  37782070 gaatcaaaaagtctcttttagtgttttctcttaagattcatttacgagtgtaggtgacttgaaaaatgggtagaaattaagatttgttctttgtgagttt 37781971  T
Q  301 ttaagctaatttctagtaacc 321  Q
    |||||||||||||| ||||||    
T  37781970 ttaagctaatttcttgtaacc 37781950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 6542459 - 6542389
Alignment:
Q  100 aatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    |||||||| |||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||    
T  6542459 aatacaaaggaggtaactttagggttgagtgtctttgtaatgaggttctcttgggttgggaaacattgtaa 6542389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 51336938 - 51337024
Alignment:
Q  84 gagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||| ||||||| | |||||||| || ||||||||||| |||| ||||||| |||||||||||||||||||||| |||||||||||    
T  51336938 gagagagaaacttaggaatacaaaggaagtaactttagggttgaatgtctttgtagtgaggttctcttgggttggaaaacattgtaa 51337024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 28468305 - 28468456
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttggg--aaacattgtaattactttggg 180  Q
    |||||| ||||||||||  |||||| |||| |||| |||| || ||||||||| |||||||| ||||||||||||||  ||| |||||||  || |||||    
T  28468305 agagagagaaacttggat-tacaaaggagggaactctagggttaagtgtctttgtagtgaggatctcttgggttgggaaaaatattgtaaacaccttggg 28468403  T
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    || |||||||||||| ||| |||| ||  |||||||||| |||||| |||||||    
T  28468404 tagtgagatttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 28468456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 207 - 320
Target Start/End: Complemental strand, 39593930 - 39593817
Alignment:
Q  207 caaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaagtctgttcttcgtgagcttttaagc 306  Q
    ||||||||||||||  ||| |||||||||| |||||||| | || |||||||||||| ||| |||||||||||| ||   ||||| ||||| || ||| |    
T  39593930 caaaaagcttccttgagtggtttctcttaggattcattgtgggtttgagtgacttgacaaaggggtagaaattaggttgattctttgtgagtttgtaaac 39593831  T
Q  307 taatttctagtaac 320  Q
    |||||||| |||||    
T  39593830 taatttcttgtaac 39593817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 4587847 - 4587918
Alignment:
Q  100 aatacaaaagaggtaactttaggattgagtgtcttta-tagtgaggttctcttgggttgggaaacattgtaa 170  Q
    |||||||| ||| |||||||||| || |||||||||  ||||||||||||| ||||||||||||||||||||    
T  4587847 aatacaaatgagataactttagggttaagtgtcttttgtagtgaggttctcatgggttgggaaacattgtaa 4587918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 9927755 - 9927665
Alignment:
Q  79 ttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    |||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | | | |||||||||||||||||||||||||||    
T  9927755 ttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-gattaaagttctcttgggttgggaaacattgtaa 9927665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 75 - 153
Target Start/End: Complemental strand, 37755227 - 37755149
Alignment:
Q  75 gagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgg 153  Q
    |||||| ||||||| ||||||||||||  |||| |||||||||||||||||||| ||||||   | |||||||||||||    
T  37755227 gagtttcaagagagagaaacttggaaaatcaaaggaggtaactttaggattgagagtctttggtgagaggttctcttgg 37755149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 48893922 - 48893850
Alignment:
Q  100 aatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctctt--gggttgggaaacattgtaa 170  Q
    |||||||| ||||||| || ||| |||||||||||| |||||||||||||||  ||||| |||||||||||||    
T  48893922 aatacaaaggaggtaatttgagggttgagtgtctttgtagtgaggttctctttagggtttggaaacattgtaa 48893850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 5429541 - 5429639
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||| ||  |||| || ||||||||||| ||||| ||||||  | |   |||||||||||||||||||||||||||    
T  5429541 aggagagcttgaagagagagaaacttgggaaatcaaaggaagtaactttagggttgagggtcttt-gattagagttctcttgggttgggaaacattgtaa 5429639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 170
Target Start/End: Complemental strand, 26175942 - 26175844
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||| ||  |||| |||||||||||||  ||||| ||||||  | | | ||||| |||||||||||||||||||||    
T  26175942 aggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagagttgagggtcttt-gattaaagttctgttgggttgggaaacattgtaa 26175844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 52082955 - 52082865
Alignment:
Q  79 ttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    |||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | |   |||||||||||||||||||||||||||    
T  52082955 ttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-gattagagttctcttgggttgggaaacattgtaa 52082865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 6677362 - 6677424
Alignment:
Q  104 caaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacatt 166  Q
    |||| |||||||||||||| |||||||||||| |   | ||||||||||||||||||||||||    
T  6677362 caaaggaggtaactttagggttgagtgtctttgttcaggggttctcttgggttgggaaacatt 6677424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 873411 - 873527
Alignment:
Q  206 tcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag-tctgttcttcgtgagcttttaa 304  Q
    |||||||||||| |||||||||||||||||  | | | || || |||| |||||| |||| ||| |||||||||| | | |||| || | ||||||||||    
T  873411 tcaaaaagcttcattttgtgttttctcttaagacttaatgtgactgtgggtgactcgaaatatgagtagaaattaggatttgttatttgcgagcttttaa 873510  T
Q  305 gctaatttctagtaacc 321  Q
    | |||||||| ||||||    
T  873511 gttaatttcttgtaacc 873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 5871832 - 5871894
Alignment:
Q  262 gaaaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    ||||||||||||||||||| || ||||||| |||||||  ||||||| ||||||| |||||||    
T  5871832 gaaaaatgggtagaaattaggtttgttctttgtgagcttgtttaagcaaatttcttgtaaccc 5871894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 379394 - 379454
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    ||||||||||||||||| || ||||||| |||||||  || |||||||||||| |||||||    
T  379394 aaaatgggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaaccc 379454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 301
Target Start/End: Complemental strand, 13009585 - 13009548
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagcttt 301  Q
    ||||||||||||||||| || |||||||||||||||||    
T  13009585 aaaatgggtagaaattaggtttgttcttcgtgagcttt 13009548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 314
Target Start/End: Original strand, 18912276 - 18912365
Alignment:
Q  226 ttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta-agtctgttcttcgtgagcttttaagctaatttct 314  Q
    ||||||||||| |||||||| | || ||||||||||||||||||| || || |||  || ||||||| ||||| || ||| |||||||||    
T  18912276 ttttctcttaggattcattgtgggtttgagtgacttgaaaaatggatataatttagggtttgttctttgtgagtttgtaaactaatttct 18912365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 36994538 - 36994598
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    |||||||||||||||||||  ||||||| |||||||  || |||||||||||| |||||||    
T  36994538 aaaatgggtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaaccc 36994598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 280
Target Start/End: Complemental strand, 36175315 - 36175238
Alignment:
Q  201 aagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta 280  Q
    |||| ||||| | ||||||||  ||||||||| ||| |||||||| |||||||  ||||||  |||||||||||||||||    
T  36175315 aaggatcaaacaacttcctttaatgttttctcataggattcattgtgagtgtg--tgacttagaaaatgggtagaaatta 36175238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 36994387 - 36994435
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaacttt 119  Q
    ||||||| |||||||||| ||||||||||||  |||| |||||||||||    
T  36994387 aggagaggttgaagagagagaaacttggaaaatcaaaggaggtaacttt 36994435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 52093962 - 52093906
Alignment:
Q  79 ttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtcttt 135  Q
    |||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||    
T  52093962 ttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt 52093906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 1e-66; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 102 - 340
Target Start/End: Original strand, 3323469 - 3323709
Alignment:
Q  102 tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaa 201  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  || ||||||| |||||||||||| ||| |    
T  3323469 tacaaaggaggtaactttagggttgagtgtctttatagtgaggttctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgga 3323568  T
Q  202 agggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaagtc-tgttc-ttcgtgagct 299  Q
    | | |||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||| ||||||||||||||| | | ||||| || || ||||    
T  3323569 atgatcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgggtgatatgaacaatgggtagaaattatgacttgttcttttgtaagct 3323668  T
Q  300 tttaagctaatttctagtaaccccttatatcactttcatct 340  Q
    | ||||||||||||| ||||| | || || |||||||||||    
T  3323669 tataagctaatttcttgtaactcattgtaacactttcatct 3323709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 102 - 280
Target Start/End: Original strand, 1417269 - 1417447
Alignment:
Q  102 tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaa 201  Q
    |||||| |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||  ||||| |||| |||||||||||| |||||    
T  1417269 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggttatcttgggttgggaaacattgtaaacactttaggtagtgagatttcaccattgaa 1417368  T
Q  202 agggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta 280  Q
    ||| |||||||| || ||||||||||||||||||| |||||||| ||||||| ||||  ||||||||||||||||||||    
T  1417369 aggatcaaaaagttttcttttgtgttttctcttaggattcattgggagtgtgggtgatatgaaaaatgggtagaaatta 1417447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 84 - 320
Target Start/End: Complemental strand, 25796108 - 25795870
Alignment:
Q  84 gagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaattactttgggt 181  Q
    ||||| ||||||||| |||||||| |||||||||| ||| |||||||||||| |||||||| |||||||  |||||||||||| |||||  || ||||||    
T  25796108 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggctctcttgagggttgggaaacaatgtaaacaccttgggt 25796009  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaa 281  Q
    | |||||||||||| ||| |||| ||||||||||||||||| ||||||||||||| |||||||||||||||| |||||    |||||||||||||||||     
T  25796008 agtgagatttcaccattggaaggatcaaaaagcttccttttatgttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtagaaattag 25795911  T
Q  282 gtc-tgttc-ttcgtgagcttttaagctaatttctagtaac 320  Q
    ||| ||||| || || ||||| ||||||||||||| |||||    
T  25795910 gtcttgttcttttgtaagcttataagctaatttcttgtaac 25795870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 73 - 243
Target Start/End: Original strand, 40592532 - 40592701
Alignment:
Q  73 gagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatt 172  Q
    ||||| |||||||||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||      
T  40592532 gagagcttgaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaac 40592630  T
Q  173 actttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcat 243  Q
    || ||||||| |||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  40592631 accttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 40592701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 74 - 320
Target Start/End: Original strand, 24694917 - 24695162
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatta 173  Q
    |||| |||||||||| |||| |||||  |||||| |||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||  |    
T  24694917 agagcttgaagagagagaaatttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaaca 24695015  T
Q  174 ctttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggta 273  Q
    | ||||||  |||||||||||| ||| || | |||||||||||||||||||||||||| |||| |||||||||||||||| |||||    ||||||||||    
T  24695016 ccttgggtggtgagatttcaccattggaatgatcaaaaagcttccttttgtgttttcttttaggattcattgagagtgtgggtgac--acaaaatgggta 24695113  T
Q  274 gaaattaagtc-tgttc-ttcgtgagcttttaagctaatttctagtaac 320  Q
    ||||||| ||| ||||| || || || || ||||||||||||| |||||    
T  24695114 gaaattaggtcttgttcttttgtaagtttataagctaatttcttgtaac 24695162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 71 - 244
Target Start/End: Original strand, 47923652 - 47923824
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||||  |||||| ||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||    
T  47923652 aggagagcttgaagagagagaaacttggat-tacaaaggaggtaactttaggattgagtgtctttgtagtgagaatctcttgggttgggaaacattgtaa 47923750  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcatt 244  Q
      || ||||||| |||||||||||| ||| |||| ||||||||||||||||||||||||||| ||| |||||||    
T  47923751 acaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcgtaggattcatt 47923824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 83 - 340
Target Start/End: Original strand, 3328117 - 3328375
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  || ||| ||| |||||||||| |||| ||||||| ||||||| |||||||||||||| |||||||||||  || |||||||    
T  3328117 agagagagaaacttggat-tagaaaggagataactttagggttgaatgtctttgtagtgagcttctcttgggttggaaaacattgtaaacaccttgggta 3328215  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag 282  Q
     |||||||||| | ||| |||| ||||||| ||||||||||||||||||||||| || ||||||||||||| ||||  |||||||||||||||||||| |    
T  3328216 gtgagatttcagcattggaaggatcaaaaaacttccttttgtgttttctcttaggatacattgagagtgtgggtgatatgaaaaatgggtagaaattagg 3328315  T
Q  283 tc-tgttc-ttcgtgagcttttaagctaatttctagtaaccccttatatcactttcatct 340  Q
     | ||||| || || ||||| ||||||||||||| ||||| | || || |||||||||||    
T  3328316 acttgttcttttgtaagcttataagctaatttcttgtaactcattgtaacactttcatct 3328375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 73 - 339
Target Start/End: Complemental strand, 21711558 - 21711292
Alignment:
Q  73 gagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatt 172  Q
    ||||| |||||||||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||      
T  21711558 gagagcttgaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaac 21711460  T
Q  173 actttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcatt---gagagtgtgagtgacttgaaaaatg 269  Q
    || ||| ||| |||||||||||| ||| |||| |||||| |||||||||||||||||||||||| |||||||   ||||||||| || ||   | |||||    
T  21711459 accttgagtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgttttctcttaggattcattattgagagtgtgggtaac---acaaatg 21711364  T
Q  270 ggtagaaattaagtct-gttcttc-gtgagcttttaagctaatttctagtaaccccttatatcactttcatc 339  Q
    ||||||||||| |||| | ||||  || ||||||||||||||||||| ||||| | || || ||||||||||    
T  21711363 ggtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactctttgtaacactttcatc 21711292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 71 - 244
Target Start/End: Original strand, 1736052 - 1736224
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||||||| |||||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| ||| |||||||||||||||||||||    
T  1736052 aggagagtttggagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctattgggttgggaaacattgtaa 1736150  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcatt 244  Q
      || ||||||| |||||||||||| ||| |||| |||||||||||| |||||||||||||||||| |||||||    
T  1736151 acaccttgggtagtgagatttcaccattggaaggatcaaaaagcttctttttgtgttttctcttaggattcatt 1736224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 74 - 339
Target Start/End: Original strand, 8370240 - 8370504
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatta 173  Q
    |||| |||||||||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||  |    
T  8370240 agagcttgaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaaca 8370338  T
Q  174 ctttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattc--attgagagtgtgagtgacttgaaaaatggg 271  Q
      ||||||| |||||||||||| ||| |||| || ||||| |||||||||||||||||||||| ||||  |||| ||| ||| |||||   | |||||||    
T  8370339 tcttgggtagtgagatttcaccattggaaggatc-aaaagtttccttttgtgttttctcttaggattcatattgtgagagtgggtgac---acaaatggg 8370434  T
Q  272 tagaaattaagtc-tgttctt-cgtgagcttttaagctaatttctagtaaccccttatatcactttcatc 339  Q
    ||||||||| ||| |||||||  || ||||||||||||||||||| ||||| | || || ||||||||||    
T  8370435 tagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaactctttgtaacactttcatc 8370504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 71 - 320
Target Start/End: Complemental strand, 8126968 - 8126719
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||||||  |||||| ||||||||||  ||||||  | |||||||||   |||||||||||| |||||||||| |||||||||||||||||||||||    
T  8126968 aggagagtttttagagagagaaacttggat-tacaaagaaagtaactttacagttgagtgtctttgtagtgaggttttcttgggttgggaaacattgtaa 8126870  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgg 270  Q
      || ||||||| |||||||||| | ||| |||| |||||||||||| |||||||||||||||||  |||||||||||||||| |||||   ||||||||    
T  8126869 acaccttgggtagtgagatttcatcattggaaggatcaaaaagcttctttttgtgttttctcttaagattcattgagagtgtgggtgac-acaaaaatgg 8126771  T
Q  271 gtagaaattaagt-ctgttc-ttcgtgagcttttaagctaatttctagtaac 320  Q
    |||||||||||||  ||||| || || ||||| ||||||||||||| |||||    
T  8126770 gtagaaattaagtattgttcttttgtaagcttataagctaatttcttgtaac 8126719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 71 - 320
Target Start/End: Complemental strand, 40844993 - 40844740
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    |||||||||| |||| || ||||||| ||  |||||| |||||||||||||| |||||||||||| |||||||| ||| |||||||| ||||||||||||    
T  40844993 aggagagttttaagatagagaaacttagat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctattgggttgagaaacattgtaa 40844895  T
Q  171 ttactttgggtaatgagatttcaccg-----ttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaa 265  Q
      || ||| |||||||||||| |||      ||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||    ||    
T  40844894 acaccttgagtaatgagatttgacctgaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattgagagtgtgggtgac--acaa 40844797  T
Q  266 aatgggtagaaattaagtc-tgttctt-cgtgagcttttaagctaatttctagtaac 320  Q
    ||||||||||||||| ||| |||||||  || ||||| ||||||||||||| |||||    
T  40844796 aatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaac 40844740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 71 - 320
Target Start/End: Complemental strand, 48438553 - 48438303
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| ||||| |||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||| ||| |||||||| ||||||||||||||||    
T  48438553 aggagagcttgaatagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtaaggatctcttgg-ttgggaaacattgtaa 48438456  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattc---attgagagtgtgagtgacttgaaaaa 267  Q
      || ||||||| |||||||||||| ||| || | ||||||||||||||||||||||||||||||| ||||   |||||||||||| |||||    ||||    
T  48438455 acaccttgggtagtgagatttcaccattggaatgatcaaaaagcttccttttgtgttttctcttaggattcattattgagagtgtgggtgac--acaaaa 48438358  T
Q  268 tgggtagaaattaagtc-tgttctt-cgtgagcttttaagctaatttctagtaac 320  Q
    ||||||||||||| ||| |||||||  || ||||| || |||||||||| |||||    
T  48438357 tgggtagaaattaggtcttgttcttgtgtaagcttatatgctaatttcttgtaac 48438303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 83 - 280
Target Start/End: Complemental strand, 37466621 - 37466421
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  |||||| |||||||||||||   ||||||||||| ||||||||||||||| ||||||||||||||||||  |||||||||     
T  37466621 agagagagaaacttggat-tacaaaggaggtaactttagagctgagtgtctttgtagtgaggttctcttaggttgggaaacattgtaaacactttgggtt 37466523  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagt----gtgagtgacttgaaaaatgggtagaaat 278  Q
     |||||||||||| ||| || | || ||||||||||||||||||||| | |||| |||||||||||||    ||||||||  ||||||||||||||||||    
T  37466522 gtgagatttcaccattggaaagatcgaaaagcttccttttgtgttttattttaggattcattgagagtgcgggtgagtgatatgaaaaatgggtagaaat 37466423  T
Q  279 ta 280  Q
    ||    
T  37466422 ta 37466421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 84 - 243
Target Start/End: Original strand, 3715760 - 3715921
Alignment:
Q  84 gagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaattactttgggt 181  Q
    ||||| ||||||||  |||||||| |||||||||||||| |||| ||||||| ||||||||||||||||  ||||||||||||||||||  || ||||||    
T  3715760 gagagagaaacttgagaatacaaaggaggtaactttagggttgaatgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 3715859  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcat 243  Q
    | |||||||||||| ||| |||| ||||||||||| ||||||||||||||||||| ||||||    
T  3715860 agtgagatttcaccattggaaggatcaaaaagctttcttttgtgttttctcttaggattcat 3715921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 36029431 - 36029261
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| ||||||  || ||||||||||  |||||| ||||||| |||||| |||||||||||| |||||||| |||||||||||||||||||||||||    
T  36029431 aggagagcttgaagtaagagaaacttggat-tacaaaggaggtaaatttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaa 36029333  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcat 243  Q
      || ||||||| |||||||||||| ||| |||| || |||||||||||||||||||||||||||| ||||||    
T  36029332 acaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgttttctcttaggattcat 36029261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 90 - 243
Target Start/End: Complemental strand, 47649892 - 47649737
Alignment:
Q  90 gaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaattactttgggtaatgag 187  Q
    ||||||||| |||||||| ||| |||||||||| |||||||||||| ||||||||||||||||  ||||||||||||||||||  || ||||||| | ||    
T  47649892 gaaacttgggaatacaaaggagataactttagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagttag 47649793  T
Q  188 atttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcat 243  Q
    |||||||| ||  |||| ||||||||||||||||||||||||||||||| ||||||    
T  47649792 atttcaccatttgaaggatcaaaaagcttccttttgtgttttctcttaggattcat 47649737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 74 - 266
Target Start/End: Original strand, 25929147 - 25929339
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatta 173  Q
    ||||||||||| ||| ||||||| ||  |||||| |||||||||||||| |||||||||||| |||||||||||||||| ||||| |||||||||||  |    
T  25929147 agagtttgaagtgagagaaacttagat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagttggaaaacattgtaaaca 25929245  T
Q  174 ctttgggtaatgagatttcaccgttgaaagggtcaaaaagcttc--cttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaa 266  Q
    | ||||||| |||||||||||| | | |||| ||||||||||||   |||||||||||||||||| |||||||| ||||||| ||||| ||||||    
T  25929246 c-ttgggtagtgagatttcaccatcggaaggatcaaaaagcttctttttttgtgttttctcttaggattcattgtgagtgtgggtgacatgaaaa 25929339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 71 - 234
Target Start/End: Original strand, 27974700 - 27974861
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| |||||||||| ||||||||||||||    
T  27974700 aggagagcttgaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggtcgggaaacattgtaa 27974798  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
      || ||||||| |||||||||||| ||| |||| || |||||||||||||||||| |||||||    
T  27974799 acaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 27974861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 340
Target Start/End: Complemental strand, 21353894 - 21353630
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggatt--gagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaattactttg 178  Q
    |||||| ||||| | | |||||||| |||||||||||||| ||  |||||||||| ||||||||||||||||  ||||||||||||| ||||  ||||||    
T  21353894 agagagagaaacctaggaatacaaaggaggtaactttagggttttgagtgtctttgtagtgaggttctcttgagggttgggaaacatcgtaaacactttg 21353795  T
Q  179 ggtaatgagatt-tcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaa 277  Q
    |||| ||||| | ||||| ||| |||| || ||||| ||||||| |||||||||||||  ||||||||  |||||||||| | |||||||||||||||||    
T  21353794 ggtagtgagaatgtcaccattggaaggatccaaaagtttcctttagtgttttctcttaagattcattgtaagtgtgagtggcatgaaaaatgggtagaaa 21353695  T
Q  278 ttaag-tctgttcttcgtgagcttttaagctaatttctagtaac-cccttatatcactttcatct 340  Q
    ||| | | ||||||| ||||||| ||  |||||||||| ||||| |  || ||||||||||||||    
T  21353694 ttaggttgtgttctttgtgagctcttgtgctaatttcttgtaactcatttgtatcactttcatct 21353630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 73 - 234
Target Start/End: Original strand, 27986206 - 27986365
Alignment:
Q  73 gagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatt 172  Q
    ||||||| |||||||| ||||||||||  |||||| |||| ||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||      
T  27986206 gagagttggaagagagagaaacttggat-tacaaaggagggaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaac 27986304  T
Q  173 actttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    || ||||||| |||||||||||| ||| |||| || |||||||||||||||||| |||||||    
T  27986305 accttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 27986365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 83 - 285
Target Start/End: Complemental strand, 26299314 - 26299114
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  || ||| |||||||||||||| |||| ||||||| |||||||| |||||||||||||||||||||||||  || |||||||    
T  26299314 agagagagaaacttggat-tataaaggaggtaactttagggttgaatgtctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggta 26299216  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttcc-ttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaa 281  Q
     |||||||||||| ||| ||   ||||||||||||| |||||||||||||||||| ||| ||||||| |||| |||||    |||||||||||||||||     
T  26299215 gtgagatttcaccattggaattatcaaaaagcttcctttttgtgttttctcttaggattaattgagattgtgggtgac--acaaaatgggtagaaattag 26299118  T
Q  282 gtct 285  Q
    ||||    
T  26299117 gtct 26299114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 16264687 - 16264524
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| ||||||  || ||||||||||  |||||| |||||||||||||| |||||||||||| || ||||| |||||||||||||||||||||||||    
T  16264687 aggagagcttgaagtaagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtaatgaggatctcttgggttgggaaacattgtaa 16264589  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttag 236  Q
      || ||||||| |||||||||||| ||| |||| || |||||||||||||||||| |||||||||    
T  16264588 acaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctcttag 16264524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 193
Target Start/End: Original strand, 4386736 - 4386846
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| |||||||| ||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| || ||| |||    
T  4386736 agagagagaaacttgaaaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgggaaacattgtaatcaccttgagta 4386835  T
Q  183 atgagatttca 193  Q
     ||||||||||    
T  4386836 gtgagatttca 4386846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 74 - 236
Target Start/End: Original strand, 39032306 - 39032465
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatta 173  Q
    |||| |||||||||| ||||||||||  |||||| |||||||||||||| |||||||||||| ||||||| | |||||||||||| |||||||||||  |    
T  39032306 agagcttgaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgagat-ctcttgggttggtaaacattgtaaaca 39032403  T
Q  174 ctttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttag 236  Q
    | ||||||| |||||||||||| ||| |||| || |||||||||||||||||| |||||||||    
T  39032404 ccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctcttag 39032465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 155 - 320
Target Start/End: Original strand, 18552716 - 18552881
Alignment:
Q  155 ttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtga 254  Q
    ||||||||||||||||  || ||||||| |||||||||||| ||| |||| ||||||| ||||||||||||||||||||||| ||||||||||||||||     
T  18552716 ttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaaacttccttttgtgttttctcttaggattcattgagagtgtgg 18552815  T
Q  255 gtgacttgaaaaatgggtagaaattaagtc-tgttctt-cgtgagcttttaagctaatttctagtaac 320  Q
    |||||    ||||||||||||||||| ||| |||||||  || ||||| ||||||||||||| |||||    
T  18552816 gtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaac 18552881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 33386426 - 33386584
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatta 173  Q
    |||| |||||||||| ||||||||||  |||||| |||  ||||||||| |||||||||||| |||||||| |||||||||||| ||||||||||||  |    
T  33386426 agagcttgaagagagagaaacttggat-tacaaaggagagaactttagggttgagtgtctttgtagtgaggatctcttgggttgagaaacattgtaaaca 33386524  T
Q  174 ctttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    | ||||||| |||||||||||| ||| |||| || |||||||||||||||||| |||||||    
T  33386525 ccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 33386584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 79 - 234
Target Start/End: Original strand, 26928355 - 26928508
Alignment:
Q  79 ttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttg 178  Q
    ||||||||||  |||||||||  |||||| |||| |||| |||| |||||||||||| |||||||| |||||||||||||||||||||||||  || |||    
T  26928355 ttgaagagagaaaaacttggat-tacaaacgagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttg 26928453  T
Q  179 ggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    ||||||||||||||||| ||| |||| || ||||||||||| |||||| |||||||    
T  26928454 ggtaatgagatttcaccattggaaggatc-aaaagcttcctcttgtgtcttctctt 26928508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 35925776 - 35925646
Alignment:
Q  112 gtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaagggtcaaaa 211  Q
    ||||||||||| |||| ||||||| |||||||| ||| |||||||||||||||||||||  || ||||||| |||||||||||| ||| |||| || |||    
T  35925776 gtaactttagggttgaatgtctttgtagtgaggatcttttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaa 35925678  T
Q  212 agcttccttttgtgttttctcttagaattcat 243  Q
    ||||||||||||||||||||||||| ||||||    
T  35925677 agcttccttttgtgttttctcttaggattcat 35925646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 83 - 236
Target Start/End: Original strand, 6794475 - 6794626
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  |||||| |||||||||||||| ||||||||| || |||||||||||||||| |||||||||||||||||  || |||||||    
T  6794475 agagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtcattgtagtgaggttctcttgagttgggaaacattgtaaacaccttgggta 6794573  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttag 236  Q
     |||||||||||| ||| || |  | |||||||||||||||| |||||||||||    
T  6794574 gtgagatttcaccattggaatgaac-aaaagcttccttttgtattttctcttag 6794626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 73 - 234
Target Start/End: Complemental strand, 27453294 - 27453137
Alignment:
Q  73 gagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatt 172  Q
    ||||| |||||||||| ||||||||||  |||||| |||| ||||||||| |||||||||| ||  |||||| ||||||||||||| |||||||||||      
T  27453294 gagagcttgaagagagagaaacttggat-tacaaaggagggaactttagggttgagtgtctgta--gtgaggatctcttgggttggcaaacattgtaaac 27453198  T
Q  173 actttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    || ||||||| |||||||||||| ||| |||| || |||||||||||||||||| |||||||    
T  27453197 accttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 27453137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 79 - 211
Target Start/End: Complemental strand, 37726005 - 37725874
Alignment:
Q  79 ttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttg 178  Q
    |||||||||| ||||||||||  |||||| |||| ||||||||| |||||||||||| |||||||| |||||||||| |||||||||| |||  || |||    
T  37726005 ttgaagagagagaaacttggat-tacaaaggaggaaactttagggttgagtgtctttgtagtgaggatctcttgggtggggaaacattataaacaccttg 37725907  T
Q  179 ggtaatgagatttcaccgttgaaagggtcaaaa 211  Q
    | || |||||||||||| |||||||| ||||||    
T  37725906 gatagtgagatttcaccattgaaaggatcaaaa 37725874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 79 - 234
Target Start/End: Complemental strand, 32143653 - 32143500
Alignment:
Q  79 ttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttg 178  Q
    |||||||||| |||| |||||  |||||| |||| |||| |||| |||||||||||| |||||| | ||||||||||||| |||||||||||  || |||    
T  32143653 ttgaagagagagaaatttggat-tacaaaggagggaactctagggttgagtgtctttgtagtgatgatctcttgggttggaaaacattgtaaacaccttg 32143555  T
Q  179 ggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    |||| |||||||||||| ||| |||| || ||||||||||| |||||| |||||||    
T  32143554 ggtagtgagatttcaccattggaaggatc-aaaagcttcctcttgtgtcttctctt 32143500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 23392207 - 23392117
Alignment:
Q  80 tgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||||| ||||||||| | | |||| |||  || |||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  23392207 tgaagagagagaaacttgggactgcaaaggagagaaatttagggttgagtgtctttgtagtgaggttctcttgggttgggaaacattgtaa 23392117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 23410627 - 23410537
Alignment:
Q  80 tgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||||| ||||||||| | | |||| |||  ||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||    
T  23410627 tgaagagagagaaacttgggattgcaaaggagagaactttagggttgagtgtctttgtagtgaggttctcttgggttggaaaacattgtaa 23410537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 191
Target Start/End: Complemental strand, 27027041 - 27026925
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatta 173  Q
    |||| ||||||||||  |||||||||  |||||| |||||||||||||| |||||||||||| || ||||| |||||||| | ||||||||||||||  |    
T  27027041 agagcttgaagagagaaaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtactgaggatctcttggatagggaaacattgtaaaca 27026943  T
Q  174 ctttgggtaatgagattt 191  Q
    | ||||||| ||||||||    
T  27026942 ccttgggtagtgagattt 27026925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 4386843 - 4386927
Alignment:
Q  239 ttcattgagagtgtgagtgacttgaaaaatgggtagaaattaag-tctgttcttcgtgagcttttaagctaatttctagtaaccc 322  Q
    ||||| ||||||||| ||||||||||||||| |||||||||| | | ||||||| |||||||||||||||||||||| |||||||    
T  4386843 ttcatcgagagtgtgggtgacttgaaaaatgagtagaaattaggttttgttctttgtgagcttttaagctaatttcttgtaaccc 4386927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 71 - 244
Target Start/End: Original strand, 30709545 - 30709709
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||  ||||||||||  |||||| |||||||||||||  |||||||||        || | ||| |||||||||||||||||||||    
T  30709545 aggagagcttgaagagacagaaacttggat-tacaaaggaggtaactttagagttgagtgtc--------gatgatcttttgggttgggaaacattgtaa 30709635  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcatt 244  Q
      || ||||| | |||||||||| | ||| || | ||||| ||||||||||||||||||||||||| |||||||    
T  30709636 acaccttggggagtgagatttcatcattggaatgatcaaatagcttccttttgtgttttctcttaggattcatt 30709709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 191
Target Start/End: Complemental strand, 27038386 - 27038270
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatta 173  Q
    |||| ||||||||||  |||||||||  |||||| ||| |||||||||| ||||||| |||| |||||||| |||||||||| ||||||||||||||  |    
T  27038386 agagcttgaagagagaaaaacttggat-tacaaaggagataactttagggttgagtgcctttgtagtgaggatctcttgggtagggaaacattgtaaaca 27038288  T
Q  174 ctttgggtaatgagattt 191  Q
    | ||||||  ||||||||    
T  27038287 ccttgggtggtgagattt 27038270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 234
Target Start/End: Complemental strand, 1306278 - 1306127
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttggg--aaacattgtaattactttggg 180  Q
    |||||| ||||||||||  || ||| |||| |||| |||  |||||||||||| |||||||| ||||||||||||||  |||||||||||  || |||||    
T  1306278 agagagagaaacttggat-tataaaggagggaactctagagttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttggg 1306180  T
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    || |||||||||||| ||| |||| ||   ||||||||| |||||| |||||||    
T  1306179 tagtgagatttcaccattggaaggatc-ttaagcttcctcttgtgtcttctctt 1306127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 760861 - 760921
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    ||||||||||||||||| |||||||||| |||||||  ||||||||||||||| |||||||    
T  760861 aaaatgggtagaaattaggtctgttctttgtgagcttgtttaagctaatttcttgtaaccc 760921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 5366209 - 5366342
Alignment:
Q  209 aaaagcttccttttgtgttttctcttagaattcattgag-agtgtgagtgacttgaaaaatgggtagaaattaag-tctgttcttcgtgagcttttaagc 306  Q
    ||||| ||||||| |||||||| ||||| ||||||| |  |||||| |||||| |||||| |||||||||||||| | | ||| | ||||| |||||||     
T  5366209 aaaagtttcctttagtgttttcgcttaggattcatttattagtgtgggtgactagaaaaaagggtagaaattaagattttttcattgtgagattttaaga 5366308  T
Q  307 taatttctagtaacc-ccttatatcactttcatc 339  Q
    |||||||| |||||| | || |||||||||||||    
T  5366309 taatttcttgtaacctctttgtatcactttcatc 5366342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 314
Target Start/End: Complemental strand, 25517145 - 25517077
Alignment:
Q  247 gagtgtgagtgacttgaaaaatgggtagaaattaag-tctgttcttcgtgagcttttaagctaatttct 314  Q
    ||||||| ||||||||||||||  |||||||||| | | ||||||| ||||||||||||||||||||||    
T  25517145 gagtgtgggtgacttgaaaaataagtagaaattagggtttgttctttgtgagcttttaagctaatttct 25517077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 29812928 - 29813023
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    |||| |||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | | | |||||||||||||||||| ||||||||    
T  29812928 agaggttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-gattaaagttctcttgggttgggaagcattgtaa 29813023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 167
Target Start/End: Original strand, 5373088 - 5373180
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtg-aggttctcttgggttgggaaacattg 167  Q
    ||||||| ||||||| |||||||| |||  |||| |||||||||||| | ||||| |||||  | ||| ||||||||||||||||||||||||||    
T  5373088 agagtttcaagagagagaaacttgaaaaatcaaaggaggtaactttaaggttgagagtctt--tggtgaaggttctcttgggttgggaaacattg 5373180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 181
Target Start/End: Complemental strand, 22835297 - 22835199
Alignment:
Q  82 aagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggt 181  Q
    |||||||| |||||||||||  |||| |||||||||||||| ||||| ||||||  | |   ||||||||| |||||||||||||||||| || ||||||    
T  22835297 aagagaggaaaacttggaaaatcaaaggaggtaactttagggttgagggtcttt-gattagagttctcttgtgttgggaaacattgtaatcaccttgggt 22835199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 40734360 - 40734458
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||  ||||||||||||  |||| ||| |||||||||| ||||| ||||||  | |   |||||||||||||||||||||||||||    
T  40734360 aggagagcttgaagagacagaaacttggaaaatcaaaggagataactttagggttgagggtcttt-gattagagttctcttgggttgggaaacattgtaa 40734458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 312
Target Start/End: Complemental strand, 21156658 - 21156526
Alignment:
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattga-gagtgtgagtgacttgaaaaatgggtagaaatt 279  Q
    |||||||||||||   |||||| | ||||||||||| |||| |||||||||||||| | ||||| | ||||||   |||||| |||||||| |||||||     
T  21156658 taatgagatttcattattgaaaagatcaaaaagcttgctttagtgttttctcttaggaatcatttatgagtgtttatgactt-aaaaatggatagaaata 21156560  T
Q  280 a-agtctgttcttcgtgagcttttaagctaattt 312  Q
    | | | ||||||| |||| |||||||||||||||    
T  21156559 agattttgttctttgtgaacttttaagctaattt 21156526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 22835156 - 22835096
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    ||||||||||||||||| || ||||||| |||||||  ||||||||||||||| |||||||    
T  22835156 aaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaaccc 22835096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 314
Target Start/End: Complemental strand, 29100363 - 29100255
Alignment:
Q  208 aaaaagcttccttttgtgttttctcttagaattcattga-gagtgtgagtgacttgaaaaatgggtagaaattaag-tctgttcttcgtgagcttttaag 305  Q
    |||||| ||||||| || || |||||||  ||||||| | ||||||  ||||||||||||| | |||||||||| | | ||||||| ||||| |||||||    
T  29100363 aaaaagtttcctttagtattatctcttatgattcatttatgagtgtaggtgacttgaaaaacgagtagaaattagggtttgttctttgtgagtttttaag 29100264  T
Q  306 ctaatttct 314  Q
    |||||||||    
T  29100263 ctaatttct 29100255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 181
Target Start/End: Original strand, 31314378 - 31314416
Alignment:
Q  143 ggttctcttgggttgggaaacattgtaattactttgggt 181  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  31314378 ggttctcttgggttgggaaacattgtaaacactttgggt 31314416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 23392063 - 23392003
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    |||||| ||||||||||||| ||||||| |||||||  |||||| |||||||| |||||||    
T  23392063 aaaatgagtagaaattaagtttgttctttgtgagcttgtttaagataatttcttgtaaccc 23392003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 314
Target Start/End: Original strand, 29682373 - 29682425
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttct 314  Q
    ||||||||||||||||| || ||||||| |||||||  |||||||||||||||    
T  29682373 aaaatgggtagaaattatgtttgttctttgtgagcttgtttaagctaatttct 29682425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 46860488 - 46860548
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    ||||||||||||||||| || ||||||| |||||||  || |||||||||||| |||||||    
T  46860488 aaaatgggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaaccc 46860548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 49199624 - 49199564
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    |||||||||||||||||||  ||||||| |||||||  || |||||||||||| |||||||    
T  49199624 aaaatgggtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaaccc 49199564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 9581297 - 9581348
Alignment:
Q  265 aaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttct 314  Q
    |||||||||||||||| || ||||||| |||||||  |||||||||||||||    
T  9581297 aaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttct 9581348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 320
Target Start/End: Complemental strand, 32744590 - 32744532
Alignment:
Q  263 aaaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaac 320  Q
    ||||||||||||||||| ||| ||||||| |||||||  ||||||||||||||| |||||    
T  32744590 aaaaatgggtagaaatt-agtttgttctttgtgagcttgtttaagctaatttcttgtaac 32744532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 51398676 - 51398740
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtcttt 135  Q
    ||||||| |||||||||  ||||||||| ||  |||| |||||||||||||| ||||| ||||||    
T  51398676 aggagaggttgaagagatagaaacttgggaaatcaaaggaggtaactttagggttgagagtcttt 51398740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 2e-65; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 90 - 340
Target Start/End: Original strand, 2869469 - 2869722
Alignment:
Q  90 gaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagat 189  Q
    |||||||| ||||||||| ||| |||||||| | |||||||||||| |||||||||||||||| ||||| |||||||||||  || ||||||| ||||||    
T  2869469 gaaacttgaaaatacaaaggagataactttacggttgagtgtctttgtagtgaggttctcttgagttggaaaacattgtaaacacattgggtagtgagat 2869568  T
Q  190 ttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag--tctgt 287  Q
    ||| || ||| |||  ||||||||||||| || |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |  | |||    
T  2869569 ttcgccattggaagaatcaaaaagcttccgttagtgttttctcttaggattcattgagagtgtgggtgacttgaaaaatgggtagaaattaggtttttgt 2869668  T
Q  288 tcttcgtgagcttttaagctaatttctagtaac-cccttatatcactttcatct 340  Q
    |||| |||||||||||||||||||||| ||||| || || ||||||||||||||    
T  2869669 tctttgtgagcttttaagctaatttcttgtaactcctttgtatcactttcatct 2869722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 84 - 312
Target Start/End: Complemental strand, 31056371 - 31056141
Alignment:
Q  84 gagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaattactttgggt 181  Q
    ||||| ||||||||| |||||||| |||||||||| ||| |||||||||||| ||||||||||||||||  ||||||||||||||||||  || ||||||    
T  31056371 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 31056272  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaa 281  Q
    | |||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||    |||||||||||||||||     
T  31056271 agtgagatttcaccattgaaaggatcaaaaagcttccttttgtgttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtagaaattag 31056174  T
Q  282 gtc-tgttc-ttcgtgagcttttaagctaattt 312  Q
    ||| ||||| || || ||||| |||||||||||    
T  31056173 gtcttgttcttttgtaagcttataagctaattt 31056141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 83 - 320
Target Start/End: Original strand, 14698780 - 14699016
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| ||||| |||||||||||||||||||  || |||||||    
T  14698780 agagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctctcgggttgggaaacattgtaaacaccttgggta 14698878  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag 282  Q
     |||||||||||  ||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||    ||||||||||||||||| |    
T  14698879 gtgagatttcactattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattgagagtgtgggtgac--acaaaatgggtagaaattagg 14698976  T
Q  283 tc-tgttctt-cgtgagcttttaagctaatttctagtaac 320  Q
    || |||||||  || ||||| ||||||||||||| |||||    
T  14698977 tcttgttcttgtgtaagcttataagctaatttcttgtaac 14699016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 74 - 325
Target Start/End: Original strand, 15903651 - 15903902
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatta 173  Q
    |||| |||||||||| |||| ||||   |||||| |||||||| || || |||| ||||||| |||||||||||||||||||| |||||||||||||  |    
T  15903651 agagcttgaagagagagaaatttgggtttacaaatgaggtaacctttgggttgaatgtctttgtagtgaggttctcttgggttaggaaacattgtaaaca 15903750  T
Q  174 ctttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggta 273  Q
    | |||| ||||||||||||||| ||| || | | |||||| || ||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||    
T  15903751 cattggataatgagatttcaccattggaatgataaaaaagatttcttttgtgttttctcataggattcattgagagtgtgggtgacttgaaaaatgggta 15903850  T
Q  274 gaaatta-agtctgttcttcgtgagcttttaagctaatttctagtaacccctt 325  Q
    ||||||| | | ||||||| |||||||| |||||| |||||| ||||||||||    
T  15903851 gaaattagaatttgttctttgtgagcttgtaagct-atttcttgtaacccctt 15903902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 71 - 320
Target Start/End: Original strand, 33528383 - 33528629
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||    
T  33528383 aggagagcttgaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaa 33528481  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattc---attgagagtgtgagtgacttgaaaaa 267  Q
      || ||||||| |||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||   ||||||||| || |||||    ||||    
T  33528482 acacattgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattattgagagtttgggtgac--acaaaa 33528579  T
Q  268 tgggtagaaattaagtc-tgttcttcgtgagcttttaagctaatttctagtaac 320  Q
    ||||||||||||| ||| |||||||    ||||| ||||||||||||| |||||    
T  33528580 tgggtagaaattaggtcttgttctt----agcttataagctaatttcttgtaac 33528629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 71 - 320
Target Start/End: Complemental strand, 21630283 - 21630032
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||| ||| ||||||||||  |||||| |||||||||||||  |||||||||||| |||||||| |||||||||||||||||||||||||    
T  21630283 aggagagcttgaagggagagaaacttggat-tacaaaggaggtaactttagtgttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaa 21630185  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattc---attgagagtgtgagtgacttgaaaaa 267  Q
      || ||||||| |||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||   |||||||||||| |||||    ||||    
T  21630184 acaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattattgagagtgtgggtgac--acaaaa 21630087  T
Q  268 tgggtagaaattaagtc-tgttctt-cgtgagcttttaagctaatttctagtaac 320  Q
    ||||||||||||||||| |||||||  || ||||| ||| ||||||||| |||||    
T  21630086 tgggtagaaattaagtcttgttcttgtgtaagcttataaactaatttcttgtaac 21630032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 83 - 320
Target Start/End: Complemental strand, 33118461 - 33118225
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||||  || |||||||    
T  33118461 agagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggggaacattgtaaacaccttgggta 33118363  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag 282  Q
     ||||||||| || ||| |||| ||||||||||||||||||||||||||||||  |||||||||||||| | |||||    |||||||||||||||||||    
T  33118362 gtgagatttcgccattggaaggatcaaaaagcttccttttgtgttttctcttaagattcattgagagtgagggtgac--acaaaatgggtagaaattaag 33118265  T
Q  283 tc-tgttctt-cgtgagcttttaagctaatttctagtaac 320  Q
    || |||||||  || ||||| ||||||||||||| |||||    
T  33118264 tcttgttcttgtgtaagcttataagctaatttcttgtaac 33118225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 83 - 340
Target Start/End: Complemental strand, 35397837 - 35397580
Alignment:
Q  83 agagagggaaacttggaaa-tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggt 181  Q
    |||||| |||||||| ||| |||||| ||||| |||||||| |||| ||||||| ||||||||||||  |||||||| ||||||||||||||| ||||||    
T  35397837 agagagagaaacttgaaaaatacaaaggaggtcactttagggttgattgtctttgtagtgaggttcttctgggttggaaaacattgtaattaccttgggt 35397738  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaa 281  Q
    | |||||||||||| ||| |||| |||| || ||||   |||| ||||||||||| ||||||||||| |||| |||||||||||||||| |||||||||     
T  35397737 agtgagatttcaccattggaaggatcaataa-cttcaaattgtattttctcttaggattcattgagattgtgggtgacttgaaaaatggatagaaattag 35397639  T
Q  282 gtctgttcttcgtgagcttttaagctaatttctagtaacc-ccttatatcactttcatct 340  Q
    || |||||||  ||| ||||||||||||||| | |||||| | |||||||||||||||||    
T  35397638 gtttgttctttatgaccttttaagctaattt-tcgtaacctctttatatcactttcatct 35397580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 102 - 314
Target Start/End: Complemental strand, 40015232 - 40015020
Alignment:
Q  102 tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaa 201  Q
    |||||| |||||||||||||| |||||||| ||| || |||||||||||||||||||||||||||||||  || |||| || |||||||||||| ||| |    
T  40015232 tacaaaggaggtaactttagggttgagtgt-tttgtattgaggttctcttgggttgggaaacattgtaaacacattggatagtgagatttcaccattgga 40015134  T
Q  202 agggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaagtc-tgttc-ttcgtgagct 299  Q
    ||| |||||||||||||||||||| ||| |||||| ||| |||||||||||| ||||| || |||||| |||||||||| ||| ||||| || ||||| |    
T  40015133 aggatcaaaaagcttccttttgtgatttttcttaggatttattgagagtgtgggtgacatg-aaaatgagtagaaattaggtcttgttcttttgtgagtt 40015035  T
Q  300 tttaagctaatttct 314  Q
    |||||||||||||||    
T  40015034 tttaagctaatttct 40015020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 34389189 - 34389018
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||| | ||| ||||||||||  |||||| |||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||||||||    
T  34389189 aggagagcttgatgtgagagaaacttggat-tacaaaggaggtaactttagggttgtgtgtctttgtagtgaggatctcttgggttgggaaacattgtaa 34389091  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcat 243  Q
      || ||||||| |||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  34389090 acaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 34389018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 28258939 - 28259097
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatta 173  Q
    |||| |||||||||| ||||||||||  |||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||  |    
T  28258939 agagcttgaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttatagtgaggatctcttgggttgggaaacattgtaaaca 28259037  T
Q  174 ctttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
      ||||||| |||||||||||| ||| |||| || |||||||||||||||||| |||||||    
T  28259038 tcttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 28259097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 71 - 234
Target Start/End: Original strand, 36757521 - 36757682
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||| ||| |||||||| || |||||| |||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||    
T  36757521 aggagagcttgaagtgagagaaacttg-aattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaa 36757619  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
      || ||||||| |||||||||||| ||| |||| || |||||||||||||||||| |||||||    
T  36757620 acaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 36757682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 113 - 320
Target Start/End: Complemental strand, 39483230 - 39483020
Alignment:
Q  113 taactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaagggtcaaaaa 212  Q
    |||||||||| |||||||||||| | |||||| ||||||||||||||||| |||||||  || ||||||| |||||||||||| ||| || | |||||||    
T  39483230 taactttagggttgagtgtctttgttgtgaggatctcttgggttgggaaatattgtaaacaccttgggtagtgagatttcaccattggaatgatcaaaaa 39483131  T
Q  213 gcttccttttgtgttttctcttagaattc---attgagagtgtgagtgacttgaaaaatgggtagaaattaagtc-tgttctt-cgtgagcttttaagct 307  Q
     ||||||||||||||||||||||| ||||   |||||||||||| ||||| |  ||||||||||||||||| ||| |||||||  || ||||| ||||||    
T  39483130 acttccttttgtgttttctcttaggattcattattgagagtgtgggtgacat--aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagct 39483033  T
Q  308 aatttctagtaac 320  Q
    ||||||| |||||    
T  39483032 aatttcttgtaac 39483020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 84 - 320
Target Start/End: Complemental strand, 8040392 - 8040151
Alignment:
Q  84 gagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaattactttgggt 181  Q
    ||||| ||||||||| |||||||| |||||||||||| | |||||||||||| |||||| |||||||||  ||||||||||||||||||  || ||||||    
T  8040392 gagagagaaacttggtaatacaaaggaggtaactttatggttgagtgtctttgtagtgaagttctcttgagggttgggaaacattgtaaacaccttgggt 8040293  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaagcttccttttgtg-ttttctcttagaattc--attgagagtgtgagtgacttgaaaaatgggtagaaat 278  Q
    | |||||||||||| ||| |||| ||||||||||||||||| || ||||||||||| ||||  |||| ||| ||| |||||    |||||||||||||||    
T  8040292 agtgagatttcaccattggaaggatcaaaaagcttccttttatgtttttctcttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaat 8040195  T
Q  279 taagtc-tgttctt-cgtgagcttttaagctaatttctagtaac 320  Q
    || ||| |||||||  || ||||| ||||||||||||| |||||    
T  8040194 taggtcttgttcttgtgtaagcttgtaagctaatttcttgtaac 8040151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 102 - 320
Target Start/End: Complemental strand, 17865513 - 17865292
Alignment:
Q  102 tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaa 201  Q
    |||||| |||||||||||||| |||||||||||| |||||| | |||||||||||||||||||||||||  || ||||||| |||||||||||   |  |    
T  17865513 tacaaaggaggtaactttagggttgagtgtctttgtagtgaagatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcacaaataga 17865414  T
Q  202 agggtcaaaaagcttccttttgtgttttctcttagaattc---attgagagtgtgagtgacttgaaaaatgggtagaaattaagtc-tgttctt-cgtga 296  Q
    ||| ||||||||||||||||||||||||||||||| ||||   ||||||||||||  |||| |  ||||| ||||||||||| ||| |||||||  || |    
T  17865413 aggatcaaaaagcttccttttgtgttttctcttaggattcattattgagagtgtggatgacat--aaaataggtagaaattatgtcttgttcttgtgtaa 17865316  T
Q  297 gcttttaagctaatttctagtaac 320  Q
    |||| ||||||||||||| |||||    
T  17865315 gcttataagctaatttcttgtaac 17865292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 83 - 243
Target Start/End: Complemental strand, 13569655 - 13569496
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  |||||| ||| |||||||||| || ||||||||| |||||||| ||||||||||||||||||||| |||  || |||| ||    
T  13569655 agagagagaaacttggat-tacaaatgagataactttagggttaagtgtctttgtagtgaggatctcttgggttgggaaacattataaacaccttggata 13569557  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcat 243  Q
     |||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  13569556 gtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 13569496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 100 - 320
Target Start/End: Original strand, 2837814 - 2838038
Alignment:
Q  100 aatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctctt--gggttgggaaacattgtaattactttgggtaatgag-atttcaccg 196  Q
    |||||||| |||||||||||||| |||||||||||| |||||||||||||||  |||||||||||||||||||  || |||| || |||| ||||||||     
T  2837814 aatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggatagtgagaatttcacca 2837913  T
Q  197 ttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag-tctgttcttcgtg 295  Q
    ||| |||| | |||||  ||||||| |||||||||||||| |||||||||||  ||| ||||| ||||||||||| | |||||| | | ||||||| |||    
T  2837914 ttggaaggataaaaaatattcctttagtgttttctcttaggattcattgagaaggtgggtgacatgaaaaatgggcaaaaattaggttgtgttctttgtg 2838013  T
Q  296 agcttttaagctaatttctagtaac 320  Q
    |||| ||   ||||||||| |||||    
T  2838014 agctcttgtactaatttcttgtaac 2838038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 84 - 320
Target Start/End: Original strand, 34682102 - 34682342
Alignment:
Q  84 gagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctctt--gggttgggaaacattgtaattactttgggt 181  Q
    ||||| ||||||||| |||||||| |||||||||||||| |||||||||||| |||||||||||||||  | ||||| |||||||||||  || ||||||    
T  34682102 gagagagaaacttgggaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagagttggaaaacattgtaaacaccttgggt 34682201  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattca--ttgagagtgtgagtgacttgaaaaatgggtagaaatt 279  Q
    | ||||||||||||  |  |||| |||||| | |||||||||||||||||||||| |||||  ||| ||| ||| |||||    ||||||||||||||||    
T  34682202 agtgagatttcaccacttgaaggatcaaaatgtttccttttgtgttttctcttaggattcaccttgtgagagtgggtgac--acaaaatgggtagaaatt 34682299  T
Q  280 aagtc-tgttctt-cgtgagcttttaagctaatttctagtaac 320  Q
    ||||| |||||||  || ||| | ||||||||||||| |||||    
T  34682300 aagtcttgttcttgtgtaagcctgtaagctaatttcttgtaac 34682342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 102 - 322
Target Start/End: Complemental strand, 20522530 - 20522307
Alignment:
Q  102 tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaa 201  Q
    |||||| |||||||||||||| |||||||||||| |||||||  |||||||||||||||| ||||||||  |  ||||||| |||||||||||| ||  |    
T  20522530 tacaaaggaggtaactttagggttgagtgtctttgtagtgagtatctcttgggttgggaagcattgtaaacaacttgggtagtgagatttcaccatttga 20522431  T
Q  202 agggtcaaaaagcttccttttgtgttttctcttagaattc---attgagagtgtgagtgacttgaaaaatgggtagaaattaagtc-tgttc-ttcgtga 296  Q
    | | |||||||||||||||||||||||| |||||| | ||   |||||||||||| |||||    ||||||||||||||||||||| ||||| || || |    
T  20522430 atgatcaaaaagcttccttttgtgttttttcttaggactcattattgagagtgtgggtgac--acaaaatgggtagaaattaagtcttgttcttttgtaa 20522333  T
Q  297 gcttttaagctaatttctagtaaccc 322  Q
    |||| ||| ||||||||| |||||||    
T  20522332 gcttataatctaatttcttgtaaccc 20522307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 10445256 - 10445379
Alignment:
Q  102 tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaa 201  Q
    |||||| |||||||||||||| |||| ||||||| |||||||||||||| |||||||||||||||||||  || ||||||| |||||||||||| ||| |    
T  10445256 tacaaaggaggtaactttagggttgaatgtctttgtagtgaggttctctcgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgga 10445355  T
Q  202 agggtcaaaaagcttccttttgtg 225  Q
    ||| ||||||||||||||||||||    
T  10445356 aggatcaaaaagcttccttttgtg 10445379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 81 - 243
Target Start/End: Original strand, 10707021 - 10707182
Alignment:
Q  81 gaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttggg 180  Q
    |||||||| ||||||| ||  |||||| |||||||||||||| || | | ||||| |||||||| |||||||||||| ||||||||||||  || |||||    
T  10707021 gaagagagagaaacttagat-tacaaaggaggtaactttagggtttattatctttgtagtgaggatctcttgggttgagaaacattgtaaacaccttggg 10707119  T
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcat 243  Q
    || | |||||||||| ||  |||| ||||||||||||||||||||||||||||||| ||||||    
T  10707120 tagttagatttcaccattagaaggatcaaaaagcttccttttgtgttttctcttaggattcat 10707182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 71 - 285
Target Start/End: Original strand, 23078230 - 23078442
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||| ||| ||||||||||  |||||| ||||||||||| || |||||||||||| |  ||||  |||||||||||||||||||||||||    
T  23078230 aggagagcttgaagtgagagaaacttggat-tacaaaggaggtaacttttgggttgagtgtctttgtgatgagaatctcttgggttgggaaacattgtaa 23078328  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaat---tcattgagagtgtgagtgacttgaaaaa 267  Q
      || ||||||| |||||||||| | ||| |||| || |||||||||||||||||| |||||||||  |   |||||||||||||| || ||   | |||    
T  23078329 acaccttgggtagtgagatttcatcattggaaggatc-aaaagcttccttttgtgtcttctcttagggttcatcattgagagtgtgggtaac---acaaa 23078424  T
Q  268 tgggtagaaattaagtct 285  Q
    ||||||||||||||||||    
T  23078425 tgggtagaaattaagtct 23078442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 208 - 319
Target Start/End: Original strand, 28770669 - 28770781
Alignment:
Q  208 aaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta-agtctgttcttcgtgagcttttaagc 306  Q
    |||||| ||||||| |||||||||||||| |||||||| |||||||  ||||||||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  28770669 aaaaagtttcctttagtgttttctcttaggattcattgcgagtgtgtatgacttgaaaaatgggtagaaattagagtttgttctttgtgagcttttaagc 28770768  T
Q  307 taatttctagtaa 319  Q
    |||||||| ||||    
T  28770769 taatttcttgtaa 28770781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 81 - 320
Target Start/End: Original strand, 8389918 - 8390158
Alignment:
Q  81 gaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttggg 180  Q
    |||||||| ||||||||||  |||||| ||| |||||||||| ||||| |||||| |||||| | ||||||||||| |||||||||||||  || ||||     
T  8389918 gaagagagagaaacttggat-tacaaaggagataactttagggttgagggtctttgtagtgatgatctcttgggttaggaaacattgtaaacaccttgga 8390016  T
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattc--attgagagtgtgagtgacttgaaaaatgggtagaaat 278  Q
    || |||||||| ||| ||| |||  |||||||||||||| |||||||||||||||| ||||  |||| ||| ||| |||||    |||||||||||||||    
T  8390017 tagtgagattttaccattggaagaatcaaaaagcttcctcttgtgttttctcttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaat 8390114  T
Q  279 taagtc-tgttcttcgtg--agcttttaagctaatttctagtaac 320  Q
    || ||| ||||||| |||  ||||| ||||||||||||| |||||    
T  8390115 taggtcttgttctt-gtgcaagcttgtaagctaatttcttgtaac 8390158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 85 - 234
Target Start/End: Complemental strand, 40739158 - 40739011
Alignment:
Q  85 agagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaat 184  Q
    |||| ||||||||||  |||||| |||| |||| |||| |||||||||||| |||||||| |||||||||||||||||||||||||  || |||||||||    
T  40739158 agagagaaacttggat-tacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtaat 40739060  T
Q  185 gagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    ||||||||||| ||| |||| || |||||||| || |||||| |||||||    
T  40739059 gagatttcaccattggaaggatc-aaaagcttactattgtgtcttctctt 40739011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 148 - 325
Target Start/End: Original strand, 18674235 - 18674414
Alignment:
Q  148 tcttgggttgggaaacatt-gtaattactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattga 246  Q
    ||||||||||||||||||| ||||  || ||| | | ||||||||||   ||||| || ||||||||||||||||  ||||||||||||  ||||||| |    
T  18674235 tcttgggttgggaaacattcgtaaacaccttgagcagtgagatttcattattgaa-ggatcaaaaagcttcctttaatgttttctcttatgattcattta 18674333  T
Q  247 -gagtgtgagtgacttgaaaaatgggtagaaattaag-tctgttcttcgtgagcttttaagctaatttctagtaacccctt 325  Q
     ||||||| |||||||||||||||| ||||||||| | | ||||||| |||||||||||| ||||||||| ||||||||||    
T  18674334 tgagtgtgggtgacttgaaaaatggatagaaattatggtttgttctttgtgagcttttaaactaatttcttgtaacccctt 18674414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 42269697 - 42269609
Alignment:
Q  84 gagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctctt--gggttgggaaacattgtaa 170  Q
    ||||| ||||||||| |||||||| |||||||||||| | |||||||||||| |||||||||||||||  |||||||||||||||||||    
T  42269697 gagagagaaacttgggaatacaaaggaggtaactttaaggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaa 42269609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 226 - 338
Target Start/End: Original strand, 27149207 - 27149321
Alignment:
Q  226 ttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaagtc-tgttcttcgtgagcttttaagctaatttctagtaacccc- 323  Q
    ||||||||||| |||||||| ||||||| ||||||| |||||  ||||||| ||||||| ||||||| ||||||||||||| |||||||| || |||||     
T  27149207 ttttctcttaggattcattgtgagtgtgggtgacttaaaaaacaggtagaagttaagtcttgttctttgtgagcttttaaggtaatttcttgttacccct 27149306  T
Q  324 ttatatcactttcat 338  Q
    || ||||||||||||    
T  27149307 ttgtatcactttcat 27149321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 1344331 - 1344402
Alignment:
Q  100 aatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttg-ggttgggaaacattgtaa 170  Q
    |||||||| ||||||| |||||| |||||||||||| |||||||||||||||| ||||||||||||||||||    
T  1344331 aatacaaatgaggtaattttagggttgagtgtctttgtagtgaggttctcttgaggttgggaaacattgtaa 1344402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 331
Target Start/End: Complemental strand, 3278307 - 3278079
Alignment:
Q  104 caaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacatt-gtaattactttgggtaatgagatttcaccgttgaaa 202  Q
    |||| |||||||||||||| |||||| || ||   | ||| |||||||||||||| ||||||| ||||  || |||| || ||||||||||   | | |     
T  3278307 caaatgaggtaactttagggttgagtatcgttgatgagagattctcttgggttggaaaacatttgtaaacaccttggatagtgagatttcattataggac 3278208  T
Q  203 gggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaat-taagtctgttcttcgtgagcttt 301  Q
    || ||||||| |||||||| | ||||||||||||  ||||||| |||||||||||| |||||||||| | ||||||   | | ||||||| ||||| |||    
T  3278207 ggatcaaaaaacttcctttagcgttttctcttagggttcattgtgagtgtgagtgaattgaaaaatgagaagaaatcggaatttgttctt-gtgaggttt 3278109  T
Q  302 taagctaatttctagtaaccccttatatca 331  Q
    |||||||||||||  ||||| ||| |||||    
T  3278108 taagctaatttcttataacctcttttatca 3278079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 39284747 - 39284845
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | |   |||||||||||||||||||||||||||    
T  39284747 aggagaggttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-gattagagttctcttgggttgggaaacattgtaa 39284845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 312
Target Start/End: Original strand, 41586349 - 41586549
Alignment:
Q  112 gtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaaca-ttgtaattactttgggtaatgagatttcaccgttgaaagggtcaaa 210  Q
    ||||||||||| ||||||||||||   | ||| |||||||||||||| ||||| ||||||  || ||||||| |||||||| ||       ||  |||||    
T  41586349 gtaactttagggttgagtgtctttggtgagagcttctcttgggttggaaaacagttgtaaacaccttgggtagtgagattttactaggaggagaatcaaa 41586448  T
Q  211 aagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatt-aagtctgttcttcgtgagcttttaagctaa 309  Q
    ||| || ||||  ||||||||||||| || ||||  |||||  ||||||||||||||| |||||||||| |||| ||||||| ||| |||||||| ||||    
T  41586449 aagttttctttaatgttttctcttaggatccattctgagtg--agtgacttgaaaaataggtagaaattaaagtttgttctttgtgtgcttttaaactaa 41586546  T
Q  310 ttt 312  Q
    |||    
T  41586547 ttt 41586549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 234
Target Start/End: Complemental strand, 3492080 - 3491929
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgg--gaaacattgtaattactttggg 180  Q
    |||||| ||||||||||  |||||| |||| || | |||| |||||||||||| |||||||| |||||||||||||   |||||||||||  || |||||    
T  3492080 agagagagaaacttggat-tacaaaggagggaaatctagggttgagtgtctttgtagtgaggatctcttgggttggaaaaaacattgtaaacaccttggg 3491982  T
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    || ||||||| |||| ||| |||| ||   ||||||||| |||||| |||||||    
T  3491981 tagtgagattccaccattggaaggatc-ttaagcttcctcttgtgtcttctctt 3491929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 91 - 167
Target Start/End: Complemental strand, 17490429 - 17490353
Alignment:
Q  91 aaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattg 167  Q
    ||||||| ||||||||| || ||||||||| | |||| ||| |||||||| ||||||||||| ||||| ||||||||    
T  17490429 aaacttgaaaatacaaaggaagtaactttaaggttgattgtatttatagtaaggttctcttgagttggaaaacattg 17490353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 25409924 - 25409846
Alignment:
Q  119 taggattgagtgtctttatagtgaggttctcttgggttggg--aaacattgtaattactttgggtaatgagatttcacc 195  Q
    |||| |||||||||||| ||| |||| ||||||||||||||  |||||||||||  || ||||||| ||||||||||||    
T  25409924 tagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaacaccttgggtagtgagatttcacc 25409846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 170
Target Start/End: Complemental strand, 36988381 - 36988283
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | |   |||||||||||||||||||||| ||||    
T  36988381 aggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-gattagagttctcttgggttgggaaacatagtaa 36988283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 1345451 - 1345508
Alignment:
Q  223 gtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta 280  Q
    ||||||||| |||  |||||||||||||| | ||||| ||||||||||||||||||||    
T  1345451 gtgttttcttttatgattcattgagagtgggggtgacatgaaaaatgggtagaaatta 1345508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 11690515 - 11690575
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    ||||||||||||||||| || ||||||| |||||||  ||||||||||||||| |||||||    
T  11690515 aaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaaccc 11690575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 42362366 - 42362426
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    ||||||||||||||||| || ||||||| |||||||  ||||||||||||||| |||||||    
T  42362366 aaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaaccc 42362426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 723900 - 723838
Alignment:
Q  262 gaaaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    ||||| ||||||||||||| || ||||||| |||||||  ||||||||||||||| |||||||    
T  723900 gaaaactgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaaccc 723838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 14202559 - 14202501
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaac 320  Q
    ||||||||||||||||| || ||||||| |||||||  ||||||||||||||| |||||    
T  14202559 aaaatgggtagaaattatgtttgttctttgtgagcttgtttaagctaatttcttgtaac 14202501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 6595312 - 6595248
Alignment:
Q  71 aggagagtttgaagagagggaaactt-ggaaatacaaaagaggtaactttaggattgagtgtcttt 135  Q
    ||||||| |||||||||| ||||||| |||||| |||| |||||||||||||| ||||| ||||||    
T  6595312 aggagagcttgaagagagagaaacttaggaaat-caaatgaggtaactttagggttgagggtcttt 6595248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 11151745 - 11151685
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    |||||||||||||||||  | ||||||| |||||||  ||||||||||||||| |||||||    
T  11151745 aaaatgggtagaaattagatttgttctttgtgagcttgtttaagctaatttcttgtaaccc 11151685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 14633980 - 14633920
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    ||||||||||||||||| |  ||||||| |||||||  ||||||||||||||| |||||||    
T  14633980 aaaatgggtagaaattaggattgttctttgtgagcttgtttaagctaatttcttgtaaccc 14633920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 24885675 - 24885735
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagctt--ttaagctaatttctagtaaccc 322  Q
    |||||| |||||||||| || ||||||| ||||||||  |||||||||||||| |||||||    
T  24885675 aaaatgagtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaaccc 24885735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 34139925 - 34139865
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    ||||||||||||||||| |  ||||||| |||||||  ||||||||||||||| |||||||    
T  34139925 aaaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaaccc 34139865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 1e-63; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 71 - 340
Target Start/End: Complemental strand, 22819768 - 22819497
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||||||||||||||  ||||||||   |||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  22819768 aggagagtttgaagagag--aaacttgggtttacaaaggaggtaactttaggatttagtgtctttgtagtgaggttctcttgggttgggaaacattgtaa 22819671  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtg--ttttctcttagaattcattgagagtgtgagtgacttgaaaaat 268  Q
      || ||||||| | | |||||||| ||| |||| ||||||||||||||||||||  ||||||||||| |||||||||||||||| ||||||||||||||    
T  22819670 acaccttgggtagttacatttcaccattggaaggatcaaaaagcttccttttgtgttttttctcttaggattcattgagagtgtgggtgacttgaaaaat 22819571  T
Q  269 gggtagaaattaagtc-tgttcttcgtgagcttttaagctaatttctagtaac-cccttatatcactttcatct 340  Q
    || ||||||||| ||| | ||||| |||||||   |||||||||||| ||||| |  || ||||||||||||||    
T  22819570 ggttagaaattatgtcttattctttgtgagctaaaaagctaatttcttgtaactcatttgtatcactttcatct 22819497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 84 - 320
Target Start/End: Original strand, 40816585 - 40816822
Alignment:
Q  84 gagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaattactttgggt 181  Q
    ||||| ||||||||| |||||||| |||||||||| ||| |||||||||||| ||||||||||||||||  ||||||||||||||||||  || ||||||    
T  40816585 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 40816684  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaa 281  Q
    | |||||||||||| ||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||   | ||||| ||||||||||     
T  40816685 agtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattgagagtgtgggtgac---acaaatgagtagaaattag 40816781  T
Q  282 gtc-tgttc-ttcgtgagcttttaagctaatttctagtaac 320  Q
    ||| ||||| || || ||||| ||||||||||||| |||||    
T  40816782 gtcttgttcttttgtaagcttataagctaatttcttgtaac 40816822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 83 - 340
Target Start/End: Original strand, 47098596 - 47098853
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  |||||| |||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||  || |||||||    
T  47098596 agagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagcgaggttctcttgggttgggaaacattgtaaacaccttgggta 47098694  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag 282  Q
     |||||||||||| ||| |||| |||||||||||||||||||||||| ||||||  ||||||||||||||| ||||  || ||||||||||||||||| |    
T  47098695 gtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttttcttaggtttcattgagagtgtgggtgatgtg-aaaatgggtagaaattagg 47098793  T
Q  283 tc-tgttc-ttcgtgagcttttaagctaatttctagtaaccccttatatcactttcatct 340  Q
     | ||||| || || ||||| ||||||||||||| ||||| | || || |||||||||||    
T  47098794 acttgttcttttgtaagcttataagctaatttcttgtaactcattgtaacactttcatct 47098853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 83 - 273
Target Start/End: Original strand, 47102610 - 47102799
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  |||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||  || |||||||    
T  47102610 agagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgggaaacattgtaaacaccttgggta 47102708  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggta 273  Q
     |||||||||| | ||| |||| ||||||||||| |||||||||||| |||||| |||||||||||||||||||||  |||||||||||||    
T  47102709 gtgagatttcatcattggaaggatcaaaaagctttcttttgtgttttttcttaggattcattgagagtgtgagtgatatgaaaaatgggta 47102799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 71 - 314
Target Start/End: Complemental strand, 13598738 - 13598493
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| |||| |||||  |||||| |||||||||||| | |||||||||||| |||||||| ||||||||||||| |||||||||||    
T  13598738 aggagagcttgaagagagagaaaattggat-tacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttggcaaacattgtaa 13598640  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaat---tcattgagagtgtgagtgacttgaaaaa 267  Q
      || ||||||| |||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||   |||||||||||||| |||||    ||||    
T  13598639 acaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcatcattgagagtgtgggtgac--acaaaa 13598542  T
Q  268 tgggtagaaattaagtc-tgttctt-cgtgagcttttaagctaatttct 314  Q
    || |||||||||||||| |||||||  || ||||| |||||||||||||    
T  13598541 tgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttct 13598493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 84 - 320
Target Start/End: Complemental strand, 19073256 - 19073017
Alignment:
Q  84 gagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaattactttgggt 181  Q
    ||||| ||||||||| |||||||| |||||||||| ||| |||||||||||| ||||||||||||||||  ||||||||||||||||||  || |||| |    
T  19073256 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggat 19073157  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattca-ttgagagtgtgagtgacttgaaaaatgggtagaaatta 280  Q
    | |||||||||||| ||| |||| |||||||||||||||||||||||||||||||  |||| |||||||||||||||||    |||||||||||||||||    
T  19073156 agtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttagggttcatttgagagtgtgagtgac--acaaaatgggtagaaatta 19073059  T
Q  281 agt-ctgttc-ttcgtgagcttttaagctaatttctagtaac 320  Q
     ||  ||||| || || ||||| ||||||||||||| |||||    
T  19073058 ggtattgttcttttgtaagcttataagctaatttcttgtaac 19073017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 84 - 320
Target Start/End: Complemental strand, 19121146 - 19120907
Alignment:
Q  84 gagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaattactttgggt 181  Q
    ||||| ||||||||| |||||||| |||||||||| ||| |||||||||||| ||||||||||||||||  ||||||||||||||||||  || |||| |    
T  19121146 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggat 19121047  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattca-ttgagagtgtgagtgacttgaaaaatgggtagaaatta 280  Q
    | |||||||||||| ||| |||| |||||||||||||||||||||||||||||||  |||| |||||||||||||||||    |||||||||||||||||    
T  19121046 agtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttagggttcatttgagagtgtgagtgac--acaaaatgggtagaaatta 19120949  T
Q  281 agt-ctgttc-ttcgtgagcttttaagctaatttctagtaac 320  Q
     ||  ||||| || || ||||| ||||||||||||| |||||    
T  19120948 ggtattgttcttttgtaagcttataagctaatttcttgtaac 19120907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 83 - 280
Target Start/End: Complemental strand, 32889764 - 32889570
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  | |||| |||||||||||||| |||||||||||| |||||||||| | |||||||||||||||||||||  || |||||||    
T  32889764 agagagagaaacttggat-tgcaaaggaggtaactttagggttgagtgtctttgtagtgaggtttttttgggttgggaaacattgtaaacaccttgggta 32889666  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta 280  Q
     |||||||||||| ||| |||| || |||||||| ||||||||||||||||||| |||||||||||||||| ||||  ||||||||||||||||||||    
T  32889665 gtgagatttcaccattggaaggttc-aaaagctt-cttttgtgttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaatta 32889570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 71 - 285
Target Start/End: Complemental strand, 29652151 - 29651937
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| ||||| |||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| ||| |||||||||||||||||||||    
T  29652151 aggagagcttgaaaagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatcttttgggttgggaaacattgtaa 29652053  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattc---attgagagtgtgagtgacttgaaaaa 267  Q
      || ||||||| |||||||||||| ||| |||| |||||||| |||||||||||||||||||||| ||||   |||||||||||| |||||    ||||    
T  29652052 acaccttgggtagtgagatttcaccattggaaggatcaaaaagtttccttttgtgttttctcttaggattcattattgagagtgtgggtgac--acaaaa 29651955  T
Q  268 tgggtagaaattaagtct 285  Q
    ||||||||||||| ||||    
T  29651954 tgggtagaaattaggtct 29651937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 84 - 319
Target Start/End: Original strand, 47703704 - 47703943
Alignment:
Q  84 gagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaattactttgggt 181  Q
    ||||| ||||||||  |||||||| |||||||||||||| |||||||||||| ||||||||||||||||  ||||||||||||||||||  || ||||||    
T  47703704 gagagagaaacttgagaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 47703803  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattc--attgagagtgtgagtgacttgaaaaatgggtagaaatt 279  Q
    | |||||||||||| ||| || | | ||||| ||||||||||||||||||||||| ||||  |||| ||| ||| |||||    ||||||||||||||||    
T  47703804 agtgagatttcaccattggaatgataaaaaaacttccttttgtgttttctcttaggattcatattgtgagagtgggtgac--acaaaatgggtagaaatt 47703901  T
Q  280 aagtc-tgttctt-cgtgagcttttaagctaatttctagtaa 319  Q
    | ||| |||||||  || ||||| ||||||||||||| ||||    
T  47703902 aggtcttgttcttgtgtaagcttgtaagctaatttcttgtaa 47703943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 3282045 - 3281882
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||| ||| ||||||||||  |||||| |||||||||||| | |||||||||||| |||||||| |||||||||||||||||||||||||    
T  3282045 aggagagcttgaagtgagagaaacttggat-tacaaatgaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaa 3281947  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttag 236  Q
      || ||||||| |||||||||||| ||| |||| || |||||||||||||||||| |||||||||    
T  3281946 acaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctcttag 3281882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 83 - 314
Target Start/End: Complemental strand, 9476588 - 9476356
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  |||||| ||||||||||| || |||| ||||||| ||||||||||||||| ||||||||||||||||||  |  |||||||    
T  9476588 agagagagaaacttggat-tacaaaggaggtaacttttgggttgaatgtctttgtagtgaggttctctttggttgggaaacattgtaaacatcttgggta 9476490  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaatt--cattgagagtgtgagtgacttgaaaaatgggtagaaatta 280  Q
     |||||||||||| ||  |||| ||||||||||||||||||||||||||||||  |||  ||||| ||| |||||||||    ||||||| |||||||||    
T  9476489 gtgagatttcaccatttgaaggatcaaaaagcttccttttgtgttttctcttaagattcacattgtgagagtgagtgac--acaaaatggatagaaatta 9476392  T
Q  281 agtc-tgttctt-cgtgagcttttaagctaatttct 314  Q
     ||| |||||||  || ||||| |||||||||||||    
T  9476391 ggtcttgttcttgtgtaagcttgtaagctaatttct 9476356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 81 - 234
Target Start/End: Complemental strand, 37070095 - 37069944
Alignment:
Q  81 gaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttggg 180  Q
    |||||||| ||||||||||  |||||| |||||||||||| | |||||||||||| |||||||| |||||||||||||||||||||||||  || ||||     
T  37070095 gaagagagagaaacttggat-tacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgga 37069997  T
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    ||||||||||||||| ||| |||| || |||||||||||||||||| |||||||    
T  37069996 taatgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 37069944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 83 - 235
Target Start/End: Original strand, 27104173 - 27104323
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  |||||| |||||||||||| | |||||||||||| ||||||||| |||||||||||||||||||| |||  || |||||||    
T  27104173 agagagagaaacttggat-tacaaaggaggtaactttaaggttgagtgtctttgtagtgaggt-ctcttgggttgggaaacattataagcaccttgggta 27104270  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctta 235  Q
     |||||||||||| ||| |||  ||||||||||||||||||||||||||||||    
T  27104271 gtgagatttcaccattggaagaatcaaaaagcttccttttgtgttttctctta 27104323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 71 - 234
Target Start/End: Original strand, 13604381 - 13604542
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| || ||||||| ||||||||||  |||||| |||| ||||||||| |||||| ||||| |||||||| |||||||||||||||||||||||||    
T  13604381 aggagagcttaaagagagagaaacttggat-tacaaaggagggaactttagggttgagtatctttgtagtgaggatctcttgggttgggaaacattgtaa 13604479  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
      || ||||||| |||||||||||| ||| |||| || |||||||||||||||||| |||||||    
T  13604480 acaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 13604542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 71 - 266
Target Start/End: Original strand, 9022665 - 9022857
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| |||||||||   |||||| |||||| |||| || |||| ||||||| ||||||||||||||||||||| ||||||||||||    
T  9022665 aggagagcttgaagagagagaaacttgggtttacaaaggaggtatcttttgg-ttgaatgtctttgtagtgaggttctcttgggttgagaaacattgtaa 9022763  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaa 266  Q
      || ||  ||| |||||||||||| ||| |||| | |||||||||||  ||| |||||||||||| |||||||| |||||||  |||||||||||    
T  9022764 acacctttcgtagtgagatttcaccattggaaggataaaaaagcttcc--ttgagttttctcttaggattcattgtgagtgtggttgacttgaaaa 9022857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 16124340 - 16124445
Alignment:
Q  139 gtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaa 238  Q
    |||||| |||||||||||||||||||||||||  || ||||||| |||||||||||| ||| |||| ||||||||||||||||||||||||||||||| |    
T  16124340 gtgaggatctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttagga 16124439  T
Q  239 ttcatt 244  Q
    ||||||    
T  16124440 ttcatt 16124445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 21536329 - 21536492
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||| ||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| |||||| |||||| |||||||||||    
T  21536329 aggagagcttgaagtgagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttaggttggaaaacattgtaa 21536427  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttag 236  Q
      || ||||||| | |||||||||| ||| |||| ||  ||||||||||||||||| |||||||||    
T  21536428 acaccttgggtagtaagatttcaccattggaaggatc-gaaagcttccttttgtgtcttctcttag 21536492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 208 - 321
Target Start/End: Original strand, 35109432 - 35109546
Alignment:
Q  208 aaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaa-gtctgttcttcgtgagcttttaagc 306  Q
    |||||||||||||| || ||||||| ||| |||||||| ||||||| |||||||||||| |||||||||||||| || ||||||| ||||||||||||||    
T  35109432 aaaaagcttcctttagtattttctcgtaggattcattgtgagtgtgtgtgacttgaaaattgggtagaaattaaggtttgttctttgtgagcttttaagc 35109531  T
Q  307 taatttctagtaacc 321  Q
    |||||||| ||||||    
T  35109532 taatttcttgtaacc 35109546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 26644657 - 26644820
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    |||||||  ||||||||| ||||||||||  |||||| ||| ||| |||||| |||||||||||| |||||| | ||| |||||||||||||||||||||    
T  26644657 aggagagcctgaagagagagaaacttggat-tacaaaggagataattttagggttgagtgtctttgtagtgaagatcttttgggttgggaaacattgtaa 26644755  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttag 236  Q
      || ||| ||| |||||||||||| ||| |||| || |||||||||||||||||| |||||||||    
T  26644756 acaccttgagtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctcttag 26644820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 19361218 - 19361350
Alignment:
Q  102 tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttggg-aaacattgtaattactttgggtaatgagatttcaccgttga 200  Q
    |||||| |||| |||| |||| |||||||||||| |||||||| |||||||||||||| |||||||||||  || ||||||| |||||||||||| |||     
T  19361218 tacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaacattgtaaacaccttgggtagtgagatttcaccattgg 19361317  T
Q  201 aagggtcaaaaagcttccttttgtgttttctctt 234  Q
    |||| ||  |||||||||| |||||| |||||||    
T  19361318 aaggatc-taaagcttcctcttgtgtcttctctt 19361350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 19358611 - 19358761
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttggg-aaacattgtaattactttgggt 181  Q
    |||||| ||||||||||  |||||| |||| |||| |||| |||||||||||| |||||||| ||| |||||||||| |||||||||||  || ||||||    
T  19358611 agagagagaaacttggat-tacaaaggagggaactctagggttgagtgtctttgtagtgaggatcttttgggttgggaaaacattgtaaacaccttgggt 19358709  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    | |||||||||||| ||| |||| ||  |||||||||| |||||| |||||||    
T  19358710 agtgagatttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 19358761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 19366075 - 19366226
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttggg--aaacattgtaattactttggg 180  Q
    |||||| ||||||||||  |||||| |||| |||| |||| |||||||||||| |||||||| ||||||||||||||  ||| |||||||  || |||||    
T  19366075 agagagagaaacttggat-tacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaatattgtaaacaccttggg 19366173  T
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    || |||||||||||| ||| |||| ||  |||||||||| |||||| |||||||    
T  19366174 tagtgagatttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 19366226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 141 - 272
Target Start/End: Original strand, 11031302 - 11031433
Alignment:
Q  141 gaggttctcttgggttgggaaacatt-gtaattactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgtttt-ctcttagaa 238  Q
    |||||||||||||||||||||||||| ||||  ||  |||||| ||||  ||||   ||| |||| |||||||||||||||| ||||||| ||||||| |    
T  11031302 gaggttctcttgggttgggaaacatttgtaaacaccgtgggtagtgag--ttcattattggaaggatcaaaaagcttcctttagtgtttttctcttagga 11031399  T
Q  239 ttcattgagagtgtgagtgacttgaaaaatgggt 272  Q
    | ||||| |||||||| |||||||||||||||||    
T  11031400 tacattgtgagtgtgaatgacttgaaaaatgggt 11031433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 209 - 314
Target Start/End: Original strand, 17345415 - 17345521
Alignment:
Q  209 aaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag-tctgttcttcgtgagcttttaagct 307  Q
    ||||| || ||||||||||||||||||  ||||||| |||||||| ||||||| |||||||||||||||||| | | ||||||| ||| ||| ||| |||    
T  17345415 aaaagttttcttttgtgttttctcttaagattcattaagagtgtgggtgacttaaaaaatgggtagaaattaggttttgttctttgtgggctcttatgct 17345514  T
Q  308 aatttct 314  Q
    |||||||    
T  17345515 aatttct 17345521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 24202536 - 24202687
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttggg--aaacattgtaattactttggg 180  Q
    |||||| ||||||||||  |||||| |||| ||||||||| |||||||||||| ||| |||  ||||||||||||||  |||||||||||| || |||||    
T  24202536 agagagagaaacttggat-tacaaaggagggaactttagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 24202634  T
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    || |||||| ||||| ||| |||| ||  |||||||||| | |||| |||||||    
T  24202635 tagtgagatctcaccattggaaggatc-taaagcttcctctagtgtcttctctt 24202687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 321
Target Start/End: Original strand, 32736897 - 32737005
Alignment:
Q  214 cttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta-agtctgttcttcgtgagcttttaagctaattt 312  Q
    |||||||| | |||||||||||| |||||||| ||||||   |||||||||||||||||||||||||  || |||||||  ||| |||||||||||||||    
T  32736897 cttcctttagggttttctcttaggattcattgtgagtgtcgatgacttgaaaaatgggtagaaattagggtttgttctttatgaacttttaagctaattt 32736996  T
Q  313 ctagtaacc 321  Q
     | ||||||    
T  32736997 tttgtaacc 32737005  T

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Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 10925085 - 10925183
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||||||  |||| |||||||||||||| ||||| ||||||  | |   |||||||||||||||||||||||||||    
T  10925085 aggagagcttgaagagagagaaacttggaaaatcaaaggaggtaactttagggttgagggtcttt-gattatagttctcttgggttgggaaacattgtaa 10925183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 166
Target Start/End: Original strand, 17345331 - 17345414
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacatt 166  Q
    |||||||||||| ||  |||||||| ||||||  |||||| |||||||||||| |||||||||||||||| |||| ||||||||    
T  17345331 agagagggaaacatgagaatacaaaggaggtacatttagggttgagtgtctttgtagtgaggttctcttgagttgagaaacatt 17345414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 3189193 - 3189291
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    |||||||  ||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | | | |||||||||||||||||||||||||||    
T  3189193 aggagagcatgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-gattaaagttctcttgggttgggaaacattgtaa 3189291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 3198010 - 3198108
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    |||||||  ||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | | | |||||||||||||||||||||||||||    
T  3198010 aggagagcatgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-gattaaagttctcttgggttgggaaacattgtaa 3198108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 3206849 - 3206947
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    |||||||  ||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | | | |||||||||||||||||||||||||||    
T  3206849 aggagagcatgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-gattaaagttctcttgggttgggaaacattgtaa 3206947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 4552905 - 4552845
Alignment:
Q  109 gaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    |||||||||||||| ||||| ||||||| | |||||||||||||||||| ||||||||||||    
T  4552905 gaggtaactttagggttgagggtcttta-attgaggttctcttgggttgagaaacattgtaa 4552845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 82 - 170
Target Start/End: Complemental strand, 197203 - 197116
Alignment:
Q  82 aagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    |||||||| |||||||||||  |||| |||||||||||||| ||||| ||||||  | |   |||||||||||||||||||||||||||    
T  197203 aagagaggaaaacttggaaaatcaaaggaggtaactttagggttgagggtcttt-gattagagttctcttgggttgggaaacattgtaa 197116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 319
Target Start/End: Original strand, 918375 - 918487
Alignment:
Q  209 aaaagcttccttttgtgttttctcttagaattcattgagagtgtgagt-gacttgaaaaatgggtagaaatta-agtctgttcttcgtgagcttttaagc 306  Q
    |||||||||| ||  ||||||||||||| |||||||| | || ||||| || |||||||||||||||||||||  || ||||||| ||||| || ||||     
T  918375 aaaagcttccattattgttttctcttaggattcattgtgggtttgagtggaattgaaaaatgggtagaaattatggtttgttctttgtgagtttgtaaga 918474  T
Q  307 taatttctagtaa 319  Q
    |||||||| ||||    
T  918475 taatttcttgtaa 918487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 320
Target Start/End: Complemental strand, 10997159 - 10997045
Alignment:
Q  208 aaaaagcttccttttgtgtttt-ctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta-agtctgttcttcgtgagcttttaag 305  Q
    |||||||||||||| ||||||| || |||| |||||  | ||||| | ||||||||||||||||||||||||||  || |||| || || | ||||||||    
T  10997159 aaaaagcttcctttagtgtttttcttttaggattcaacgtgagtgagggtgacttgaaaaatgggtagaaattagggtttgttatttgttatcttttaag 10997060  T
Q  306 ctaatttctagtaac 320  Q
     |||||||| |||||    
T  10997059 ttaatttcttgtaac 10997045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 73 - 170
Target Start/End: Original strand, 31659102 - 31659198
Alignment:
Q  73 gagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||| |||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | |   ||||||||||||| |||||||||||||    
T  31659102 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-gattagagttctcttgggttcggaaacattgtaa 31659198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 28223719 - 28223632
Alignment:
Q  79 ttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattg 167  Q
    |||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | |   ||||||||||||||||||||||||    
T  28223719 ttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-gattagagttctcttgggttgggaaacattg 28223632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 3156728 - 3156826
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| | |||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | |   ||||||||||||| |||||||||||||    
T  3156728 aggagagctggaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-gattagagttctcttgggtttggaaacattgtaa 3156826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 8550941 - 8550883
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaac 320  Q
    ||||||||||||||||| || ||||||| |||||||  ||||||||||||||| |||||    
T  8550941 aaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaac 8550883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 31659250 - 31659312
Alignment:
Q  262 gaaaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    ||||||||||||||||||| | |||||||| |||||||  || |||||||||||| |||||||    
T  31659250 gaaaaatgggtagaaattagggctgttctttgtgagcttgttgaagctaatttcttgtaaccc 31659312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 44455022 - 44455120
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| ||| |||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | |   ||| |||||||||||||||||||||||    
T  44455022 aggagaggttgtagagagagaaacttggtaaatcaaaggaggtaactttagggttgagggtcttt-gattagagttttcttgggttgggaaacattgtaa 44455120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 181
Target Start/End: Complemental strand, 50169505 - 50169407
Alignment:
Q  82 aagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggt 181  Q
    ||||||| |||||| || ||  |||| |||||||||||||| ||||| || ||| || |  |||| ||||||||||||||||||||||| ||| ||||||    
T  50169505 aagagagagaaactagggaaatcaaaggaggtaactttagggttgagggttttt-tattagggttatcttgggttgggaaacattgtaaataccttgggt 50169407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 181
Target Start/End: Original strand, 777176 - 777214
Alignment:
Q  143 ggttctcttgggttgggaaacattgtaattactttgggt 181  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  777176 ggttctcttgggttgggaaacattgtaaacactttgggt 777214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 333
Target Start/End: Original strand, 11032268 - 11032342
Alignment:
Q  261 tgaaaaatgggtagaaattaag-tctgttcttcgtgagcttttaagctaatttctagtaacc-ccttatatcact 333  Q
    |||||||||||||||||||| | | ||||||| ||||| |||||| ||||||||| |||||| | ||||||||||    
T  11032268 tgaaaaatgggtagaaattatgttttgttctttgtgagtttttaatctaatttcttgtaacctctttatatcact 11032342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 34603589 - 34603650
Alignment:
Q  263 aaaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    |||||||||||||||||| |  ||||||| |||||||  ||||||||||||||| |||||||    
T  34603589 aaaaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaaccc 34603650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 320
Target Start/End: Complemental strand, 8281520 - 8281407
Alignment:
Q  208 aaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta-agtctgttcttcgtgagcttttaagc 306  Q
    ||||| |||||||| |||||||||||| | |||||||| ||||| | ||||||| || ||| | ||||||||| | | ||||||| ||||||  ||| |     
T  8281520 aaaaaacttcctttagtgttttctctttggattcattgtgagtgcgggtgacttaaataattgatagaaattagaatttgttctttgtgagcgattatgt 8281421  T
Q  307 taatttctagtaac 320  Q
    |||||||| |||||    
T  8281420 taatttcttgtaac 8281407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 37168311 - 37168371
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    ||||||||||||||||| |  ||||||| |||||||  ||||||||||||||| |||||||    
T  37168311 aaaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaaccc 37168371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 41360807 - 41360875
Alignment:
Q  104 caaaagaggtaactttaggattgagtgtctttatagtgaggttctctt--gggttgggaaacattgtaa 170  Q
    |||| |||||||||||||| |||||||  | | |||||||||||||||  |||||||||||||| ||||    
T  41360807 caaaggaggtaactttagggttgagtgcatgtgtagtgaggttctcttgagggttgggaaacatcgtaa 41360875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 4552791 - 4552728
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaacccctt 325  Q
    ||||||||||||||||| || ||| ||| |||||||  || |||||||||||| ||||||||||    
T  4552791 aaaatgggtagaaattaggtttgtcctttgtgagcttgttgaagctaatttcttgtaacccctt 4552728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 7482384 - 7482325
Alignment:
Q  265 aaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    |||||||||||||||| |  ||||||| |||||||  ||||||||||||||| |||||||    
T  7482384 aaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaaccc 7482325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 28220524 - 28220468
Alignment:
Q  79 ttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtcttt 135  Q
    |||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||    
T  28220524 ttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt 28220468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 122; Significance: 2e-62; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 73 - 340
Target Start/End: Complemental strand, 3051457 - 3051188
Alignment:
Q  73 gagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatt 172  Q
    ||||| |||||||||| ||||||||| | || ||| |||  ||||||||| |||||||||||| ||||| |||||||||| |||||||||||||||||      
T  3051457 gagagcttgaagagagagaaacttgggactataaaggagagaactttagggttgagtgtctttgtagtggggttctcttgagttgggaaacattgtaaac 3051358  T
Q  173 actttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggt 272  Q
    |  ||||||| |||||||||||| ||| || | |||||||||||||||||||| |||||||||| ||||||||||||||| |||||| ||||||||||||    
T  3051357 atcttgggtagtgagatttcaccattggaaagatcaaaaagcttccttttgtgctttctcttaggattcattgagagtgtaagtgacatgaaaaatgggt 3051258  T
Q  273 agaaattaag-tctgttcttcgtgagcttttaagctaatttctagtaac-cccttatatcactttcatct 340  Q
    |||||||||| | ||||||| ||||||| ||| |||||||||| ||||| |  || ||||||||||||||    
T  3051257 agaaattaagttttgttctttgtgagctcttatgctaatttcttgtaactcatttgtatcactttcatct 3051188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 71 - 340
Target Start/End: Original strand, 5990321 - 5990590
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| | |||||||| ||||||||||||||||||   |||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  5990321 aggagagctagaagagagagaaacttggaaatacaaagacggtaactttagggttgagtgtcttta--gtgaggttctcttgggttgggaaacattgtaa 5990418  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgg 270  Q
    | |  |||| |  |||||||||||| ||  || ||||||||||||| |||| |||||||||||||| ||||||||| |||||| ||||||||||||||||    
T  5990419 tcatcttggtttgtgagatttcaccattcgaaaggtcaaaaagctttctttagtgttttctcttaggattcattgaaagtgtgggtgacttgaaaaatgg 5990518  T
Q  271 gtagaaattaagtc-tgttcttcgtgagcttttaagctaatttctagtaac-cccttatatcactttcatct 340  Q
    ||  |||| | ||| ||||||| |||||||||||||||||||||| |||||  | || ||||||||||||||    
T  5990519 gtgaaaatgaggtcgtgttctttgtgagcttttaagctaatttcttgtaacatctttgtatcactttcatct 5990590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 71 - 320
Target Start/End: Original strand, 4696367 - 4696615
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||||  |||||| ||| |||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||    
T  4696367 aggagagcttgaagagagagaaacttggat-tacaaaggagataactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaa 4696465  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgg 270  Q
      || ||||||| |||||||||||| ||| || | ||||||||||||||||||||||||||||||| ||||| |||||||||| |||||    |||||||    
T  4696466 acaccttgggtagtgagatttcaccattggaaagatcaaaaagcttccttttgtgttttctcttaggattcaatgagagtgtgggtgac--acaaaatgg 4696563  T
Q  271 gtagaaattaagtc-tgttctt-cgtgagcttttaagctaatttctagtaac 320  Q
    |||||||||| ||| ||||||| ||| ||||| ||||||||||||| |||||    
T  4696564 gtagaaattaggtcttgttcttgcgtaagcttataagctaatttcttgtaac 4696615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 104 - 280
Target Start/End: Original strand, 19752185 - 19752360
Alignment:
Q  104 caaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaag 203  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||  || ||||||| |||||||||| | ||| |||    
T  19752185 caaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgtgaaatattgtaaacaccttgggtagtgagatttcatcattggaag 19752284  T
Q  204 ggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta 280  Q
    | ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||  ||||||||||||||||||||    
T  19752285 gatcaaaaagcttcc-tttgtgttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaatta 19752360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 71 - 280
Target Start/End: Original strand, 5702239 - 5702449
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| ||||||||||||||||| |||||||    
T  5702239 aggagaggttgaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaatattgtaa 5702337  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtg-ttttctcttagaattc---attgagagtgtgagtgacttgaaaa 266  Q
      || ||||||| |||||||||||| ||| || | |||||||||||||||||||| ||||||||||| ||||   |||||||||||| ||||||   |||    
T  5702338 acaccttgggtagtgagatttcaccattggaatgatcaaaaagcttccttttgtgtttttctcttaggattcattattgagagtgtgggtgact--caaa 5702435  T
Q  267 atgggtagaaatta 280  Q
    ||||||||||||||    
T  5702436 atgggtagaaatta 5702449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 100 - 320
Target Start/End: Complemental strand, 6127535 - 6127310
Alignment:
Q  100 aatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaattactttgggtaatgagatttcaccgt 197  Q
    |||||||||||| |||||| ||| |||||||||||| ||||||||||||||||  ||||||||||||||||||  | |||||||| |||||||||||| |    
T  6127535 aatacaaaagagataacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacattttgggtagtgagatttcaccat 6127436  T
Q  198 tgaaagggtcaaaaagcttccttttgtgttttctcttagaattc---attgagagtgtgagtgacttgaaaaatgggtagaaattaagtc-tgttc-ttc 292  Q
    || |||| ||||||||||| ||||||||||||||||||| ||||   |||||||||||| |||||    ||||||||||||||||| ||| ||||| ||     
T  6127435 tggaaggatcaaaaagctttcttttgtgttttctcttaggattcattattgagagtgtgggtgac--acaaaatgggtagaaattaggtcttgttctttt 6127338  T
Q  293 gtgagcttttaagctaatttctagtaac 320  Q
    || ||||| ||||||||||||| |||||    
T  6127337 gtaagcttataagctaatttcttgtaac 6127310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 73 - 322
Target Start/End: Complemental strand, 28307899 - 28307648
Alignment:
Q  73 gagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatt 172  Q
    ||||| |||||||||| ||||||| | | |||||| |||||||||||||  |||||||||||| |||   ||||||||| |||||||||||||||| |      
T  28307899 gagagcttgaagagagagaaacttaggattacaaaggaggtaactttagagttgagtgtctttgtagcacggttctcttaggttgggaaacattgttaac 28307800  T
Q  173 actttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggt 272  Q
    || ||||||| |||||||||||  ||| |||| | ||||||||| |||||||||||||| |||| ||||| |||||||||| ||||||||| ||||| ||    
T  28307799 accttgggtagtgagatttcacaattggaaggataaaaaagctttcttttgtgttttcttttaggattcagtgagagtgtgggtgacttgagaaatgtgt 28307700  T
Q  273 agaaattaagtc-tgttcttcgtgagctttt-aagctaatttctagtaaccc 322  Q
    ||||| || ||| |||||||  ||||||||| || ||||||||| |||||||    
T  28307699 agaaagtaggtcttgttctttatgagcttttaaaactaatttcttgtaaccc 28307648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 71 - 236
Target Start/End: Complemental strand, 7412678 - 7412515
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||||  |||||| |||||||||||||| |||||||||||| ||| |||| |||||||||||||||||||||||||    
T  7412678 aggagagcttgaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagagaggatctcttgggttgggaaacattgtaa 7412580  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttag 236  Q
      || ||||||| |||||||||||| |||||||| || |||||||||||||| ||| |||||||||    
T  7412579 acaccttgggtagtgagatttcaccattgaaaggatc-aaaagcttccttttatgtcttctcttag 7412515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 100 - 285
Target Start/End: Original strand, 26403013 - 26403201
Alignment:
Q  100 aatacaaaagaggtaacttt-aggattgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaattactttgggtaatgagatttcaccg 196  Q
    |||||||| ||||||||||| ||| |||||||||||| ||||||||||||||||  ||||||||||||||||||  || ||||||| ||||||||||||     
T  26403013 aatacaaaggaggtaacttttagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcacca 26403112  T
Q  197 ttgaaagggtcaaaaagcttccttttgtgttttctcttagaattc--attgagagtgtgagtgacttgaaaaatgggtagaaattaagtct 285  Q
    ||| |||| ||||||||||||||||||||||||||||||  ||||  |||| ||| |||||||||    ||||||||||||||||| ||||    
T  26403113 ttggaaggatcaaaaagcttccttttgtgttttctcttatgattcatattgtgagagtgagtgac--acaaaatgggtagaaattaggtct 26403201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 79 - 243
Target Start/End: Original strand, 23799343 - 23799506
Alignment:
Q  79 ttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttg 178  Q
    |||||||||| ||||||||||  |||||| |||||||||||||| |||||||||||| ||| |||| |||||||||||||| ||||||||||  || |||    
T  23799343 ttgaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagagaggatctcttgggttggggaacattgtaaacaccttg 23799441  T
Q  179 ggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcat 243  Q
     |||  ||||||||||| ||| |||| ||||||||||||||||||||||||| ||||| ||||||    
T  23799442 agtagggagatttcaccattggaaggatcaaaaagcttccttttgtgttttcccttaggattcat 23799506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 116 - 314
Target Start/End: Original strand, 7492976 - 7493175
Alignment:
Q  116 ctttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaagggtcaaaaagct 215  Q
    ||||||| ||||| |  ||| ||||||||||||||||| ||||||||||||||||  || ||||||| |||||||||||  ||  |||| ||||||||||    
T  7492976 ctttagggttgagagcatttgtagtgaggttctcttggattgggaaacattgtaaacaccttgggtagtgagatttcacaattagaaggatcaaaaagct 7493075  T
Q  216 tccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag-tctgttcttcgtgagcttttaagctaatttct 314  Q
    |||||| ||||||| |||||| ||| |||||||||||| |||||||||||||  ||||||||||| | | ||||||  ||||||||||| | ||||||||    
T  7493076 tcctttagtgttttttcttaggatttattgagagtgtgggtgacttgaaaaacaggtagaaattaggttttgttctgtgtgagcttttatgttaatttct 7493175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 4456363 - 4456205
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatta 173  Q
    |||| |||||||||| ||||||||||  |||||| |||||||||||||| |||||||||| | |||||||| |||||||||||||||||||||||||  |    
T  4456363 agagcttgaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctctgtagtgaggatctcttgggttgggaaacattgtaaaca 4456265  T
Q  174 ctttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    | ||||||| |||||||||||| ||  |||| || |||||||||||||||||| |||||||    
T  4456264 ccttgggtagtgagatttcaccattagaaggatc-aaaagcttccttttgtgtcttctctt 4456205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 90 - 217
Target Start/End: Original strand, 9054197 - 9054324
Alignment:
Q  90 gaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagat 189  Q
    ||||||||||||||||||  |||||||||||||||||||||| ||| ||||||| |||||||||||||| ||||||| |||| || ||||||| ||||||    
T  9054197 gaaacttggaaatacaaataaggtaactttaggattgagtgtttttgtagtgagattctcttgggttggaaaacattataatcaccttgggtagtgagat 9054296  T
Q  190 ttcaccgttgaaagggtcaaaaagcttc 217  Q
    |||||| ||| |||| ||||||||||||    
T  9054297 ttcaccattggaaggatcaaaaagcttc 9054324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 224 - 340
Target Start/End: Original strand, 9054748 - 9054866
Alignment:
Q  224 tgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta-agtctgttcttcgtgagcttttaagctaatttctagtaacc- 321  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | | ||||||| ||| |||||||||||||||||| ||||||     
T  9054748 tgttttctcttaggattcattgagagtgtgagtgacttgaaaaatgggtagaaattagattttgttctttgtgcgcttttaagctaatttcttgtaacca 9054847  T
Q  322 ccttatatcactttcatct 340  Q
    | || ||||||||||||||    
T  9054848 ctttgtatcactttcatct 9054866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 79 - 236
Target Start/End: Original strand, 19175521 - 19175676
Alignment:
Q  79 ttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttg 178  Q
    |||||| ||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| |||||||| ||||||||||||||||  || |||    
T  19175521 ttgaagtgagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttggattgggaaacattgtaaacaccttg 19175619  T
Q  179 ggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttag 236  Q
    |||| |||||||||||  ||| |||| || ||||| |||||||||||| |||||||||    
T  19175620 ggtagtgagatttcactattggaaggatc-aaaagtttccttttgtgtcttctcttag 19175676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 280
Target Start/End: Original strand, 13204562 - 13204750
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| |||||||||||||||||| |||||||||||| | || | ||||||| || |||||||||||||||         |||||||  || |||||||    
T  13204562 agagagagaaacttggaaatacaaaggaggtaactttatgtttaaatgtctttgtaatgaggttctcttggg---------attgtaaacaccttgggta 13204652  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta 280  Q
     ||||||||||||||||  ||  |||||||||||  |||  | ||||||| ||| |||||||||||||||  |||| |||||||||||||| ||||||    
T  13204653 gtgagatttcaccgttgggagaatcaaaaagctttatttaatattttctcataggattcattgagagtgtaggtgaattgaaaaatgggtaaaaatta 13204750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 1261721 - 1261872
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttggg--aaacattgtaattactttggg 180  Q
    |||||| ||||||||||  |||||| |||| |||| |||| |||||||||||| ||| |||| ||||||||||||||  |||||||||||| || |||||    
T  1261721 agagagagaaacttggat-tacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttggg 1261819  T
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    || |||||||||||| ||| |||| ||  |||||||||| | |||| |||||||    
T  1261820 tagtgagatttcaccattggaaggatc-taaagcttcctctagtgtcttctctt 1261872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 9765622 - 9765709
Alignment:
Q  84 gagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctctt--gggttgggaaacattgtaa 170  Q
    ||||| ||||||||| |||||||| |||||||||| ||| ||||||||||||  ||||||||||||||  |||||||||||||||||||    
T  9765622 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtcttt-gagtgaggttctcttgagggttgggaaacattgtaa 9765709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 321
Target Start/End: Original strand, 8863521 - 8863633
Alignment:
Q  209 aaaagcttccttttgtgttttctcttagaattcattga-gagtgtgagtgacttgaaaaatgggtagaaattaa-gtctgttcttcgtgagcttttaagc 306  Q
    |||| ||||||||  |||||||||||   ||||||| | | ||||||||||||||||||||||||||||||||| || ||||||  |||||||||||||     
T  8863521 aaaatcttcctttaatgttttctctttagattcatttatgtgtgtgagtgacttgaaaaatgggtagaaattaaggtttgttct--gtgagcttttaagt 8863618  T
Q  307 taatttctagtaacc 321  Q
    |||||||| ||||||    
T  8863619 taatttcttgtaacc 8863633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 31071036 - 31071147
Alignment:
Q  124 ttgagtgtctttatagtgaggttctcttgggttggg--aaacattgtaattactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttt 221  Q
    |||||||||||| |||||||| ||||||||||||||  |||||||||||  || ||||||| |||||||||||| ||| |||| ||   ||||||||| |    
T  31071036 ttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-ttaagcttcctct 31071134  T
Q  222 tgtgttttctctt 234  Q
    ||||| |||||||    
T  31071135 tgtgtcttctctt 31071147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 6813845 - 6813767
Alignment:
Q  249 gtgtgagtgacttgaaaaatgggtagaaattaag--tctgttcttcgtgagcttttaagctaatttctagtaacccctt 325  Q
    ||||||||||||||||||||||||||||| | ||  | ||||||| ||||||||  |||||||||||| ||||||||||    
T  6813845 gtgtgagtgacttgaaaaatgggtagaaaattaggttttgttctttgtgagcttgcaagctaatttcttgtaacccctt 6813767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 15212648 - 15212746
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | |   |||||||||||||||||||||||||||    
T  15212648 aggagagcttgaagagagagaaacttgggaaatcaaatgaggtaactttagggttgagggtcttt-gattagagttctcttgggttgggaaacattgtaa 15212746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 30143204 - 30143302
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | |   |||||||||||||||||||||||||||    
T  30143204 aggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-gattagagttctcttgggttgggaaacattgtaa 30143302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 42498056 - 42498154
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | | | |||||||||||||||||||| ||||||    
T  42498056 aggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-gattaaagttctcttgggttgggaaacgttgtaa 42498154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 170
Target Start/End: Original strand, 43036287 - 43036383
Alignment:
Q  73 gagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||| |||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | |   |||||||||||||||||||||||||||    
T  43036287 gagaggttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-gattagagttctcttgggttgggaaacattgtaa 43036383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 4731528 - 4731618
Alignment:
Q  79 ttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    |||||||||| |||||||| |||  |||| |||||||||||||| ||||| ||||||  | |   |||||||||||||||||||||||||||    
T  4731528 ttgaagagagagaaacttgaaaaatcaaaggaggtaactttagggttgagggtcttt-gattagagttctcttgggttgggaaacattgtaa 4731618  T

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Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 170
Target Start/End: Original strand, 4733683 - 4733769
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    |||||| ||||||||| ||  ||||||||||||||||||| ||||| ||||||  | |   |||||||||||||||||||||||||||    
T  4733683 agagagagaaacttgggaaatcaaaagaggtaactttagggttgagggtcttt-gattagagttctcttgggttgggaaacattgtaa 4733769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 234
Target Start/End: Complemental strand, 26288220 - 26288069
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaa--cattgtaattactttggg 180  Q
    |||||| ||||||||||  |||||| | || |||| |||| |||| ||||||| ||| |||  ||||||| |||||||||  ||||||||  || |||||    
T  26288220 agagagagaaacttggat-tacaaaggggggaactctagggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaacaccttggg 26288122  T
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    || |||||||||||| ||| |||| ||  |||||||||| |||||| |||||||    
T  26288121 tagtgagatttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 26288069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 234
Target Start/End: Complemental strand, 26301477 - 26301326
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaa--cattgtaattactttggg 180  Q
    |||||| ||||||||||  |||||| | || |||| |||| |||| ||||||| ||| |||  ||||||| |||||||||  ||||||||  || |||||    
T  26301477 agagagagaaacttggat-tacaaaggggggaactctagggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaacaccttggg 26301379  T
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    || |||||||||||| ||| |||| ||  |||||||||| |||||| |||||||    
T  26301378 tagtgagatttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 26301326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 234
Target Start/End: Complemental strand, 26313471 - 26313320
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaa--cattgtaattactttggg 180  Q
    |||||| ||||||||||  |||||| | || |||| |||| |||| ||||||| ||| |||  ||||||| |||||||||  ||||||||  || |||||    
T  26313471 agagagagaaacttggat-tacaaaggggggaactctagggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaacaccttggg 26313373  T
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    || |||||||||||| ||| |||| ||  |||||||||| |||||| |||||||    
T  26313372 tagtgagatttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 26313320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 41266862 - 41266940
Alignment:
Q  104 caaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaaca-ttgtaattactttgggt 181  Q
    |||| |||||||||||||| |||| |||||||   | |||||||||||||||||||| ||| |||||| ||||||||||    
T  41266862 caaatgaggtaactttagggttgaatgtctttggtgagaggttctcttgggttgggagacagttgtaaatactttgggt 41266940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 6598986 - 6599046
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    |||||||||||||||||||| ||||||| | |||||  ||||||||||||||| |||||||    
T  6598986 aaaatgggtagaaattaagtttgttctttgcgagcttgtttaagctaatttcttgtaaccc 6599046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 6674439 - 6674499
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    |||||||||||||||||||| ||||||| | |||||  ||||||||||||||| |||||||    
T  6674439 aaaatgggtagaaattaagtttgttctttgcgagcttgtttaagctaatttcttgtaaccc 6674499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 38863743 - 38863827
Alignment:
Q  82 aagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacatt 166  Q
    ||||||| ||||||| ||||  |||| ||| |||||||| | |||||||||||||  | |  |||||||||||||||||||||||    
T  38863743 aagagagagaaactttgaaaatcaaatgagctaactttaaggttgagtgtctttagtgaggagttctcttgggttgggaaacatt 38863827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 1292617 - 1292559
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaac 320  Q
    |||||||||||||||||||| ||||||| |||||||  || |||||||||||| |||||    
T  1292617 aaaatgggtagaaattaagtttgttctttgtgagcttgttgaagctaatttcttgtaac 1292559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 135
Target Start/End: Complemental strand, 1292768 - 1292705
Alignment:
Q  72 ggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtcttt 135  Q
    |||||| || |||||||| |||||||||||  |||| |||||||||||||| ||||| ||||||    
T  1292768 ggagagcttcaagagaggaaaacttggaaaatcaaatgaggtaactttagggttgagggtcttt 1292705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 3303824 - 3303766
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaac 320  Q
    |||||||||||||||||||| ||||||| |||||||  ||||| ||||||||| |||||    
T  3303824 aaaatgggtagaaattaagtttgttctttgtgagcttgtttaacctaatttcttgtaac 3303766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 320
Target Start/End: Original strand, 42093089 - 42093188
Alignment:
Q  223 gtgttttctcttagaattcattgaga-gtgtgagtgacttgaaaaatgggtagaaattaag-tctgttcttcgtgagcttttaagctaatttctagtaac 320  Q
    |||||||||||||| | |||||| || || | ||| ||||||||||| ||||||||||| | | ||||||| ||||| || ||||||||||||| |||||    
T  42093089 gtgttttctcttaggaatcattgtgaagtctaagtaacttgaaaaataggtagaaattatgatatgttctttgtgagtttgtaagctaatttcttgtaac 42093188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 3318823 - 3318761
Alignment:
Q  104 caaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacatt 166  Q
    |||| |||||||||||||| ||||| ||||||   | |||||||||||||||| |||||||||    
T  3318823 caaatgaggtaactttagggttgagggtctttggtgggaggttctcttgggttaggaaacatt 3318761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 296
Target Start/End: Original strand, 31513237 - 31513314
Alignment:
Q  218 cttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaagtctgttcttcgtga 296  Q
    |||| |||||||||||||| |||||||| |||||||  ||||| | ||||| ||||||||||| || ||||||| ||||    
T  31513237 ctttagtgttttctcttaggattcattgtgagtgtggatgactcg-aaaataggtagaaattaggtttgttctttgtga 31513314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 314
Target Start/End: Original strand, 34477133 - 34477221
Alignment:
Q  224 tgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaagtctgttcttcgtgagcttttaagctaatttct 314  Q
    ||||||||||| | |||||||| |  | ||||||||||||||||||||| |||||| ||| ||||||| ||||| || |||| ||||||||    
T  34477133 tgttttctctttggattcattgtggatttgagtgacttgaaaaatgggtcgaaatt-agt-tgttctttgtgagtttgtaagttaatttct 34477221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 18655414 - 18655474
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    |||||||||||||||||||  ||||||| |||||||  || |||||||||||| |||||||    
T  18655414 aaaatgggtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaaccc 18655474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 19491974 - 19491906
Alignment:
Q  104 caaaagaggtaactttaggattgagtgtctttatagtgaggttctctt--gggttgggaaacattgtaa 170  Q
    |||| |||||||||||||| |||||||  | | |||||||||||||||  |||||||||||||| ||||    
T  19491974 caaaggaggtaactttagggttgagtgcatgtgtagtgaggttctcttgagggttgggaaacatcgtaa 19491906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 280
Target Start/End: Original strand, 33503780 - 33503808
Alignment:
Q  252 tgagtgacttgaaaaatgggtagaaatta 280  Q
    |||||||||||||||||||||||||||||    
T  33503780 tgagtgacttgaaaaatgggtagaaatta 33503808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 2e-62; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 21 - 340
Target Start/End: Original strand, 7160612 - 7160932
Alignment:
Q  21 gattgtgttagttgtagggaactatttaaatttcacaattaagttttattaggagagtttgaagagagggaaacttggaaatacaaaagaggtaacttta 120  Q
    ||||| || ||||| |||| |||||||||  |||||| || || ||| | || |||| |||||||  | |||| |||| | |||||| ||||||||||||    
T  7160612 gattgagtcagttgcagggcactatttaagcttcacagttcagctttttgagaagagcttgaagaatgagaaatttgggattacaaatgaggtaacttta 7160711  T
Q  121 ggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttcctt 220  Q
    || |||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||  | |||||||||| | ||| |||| |||||||||||| ||    
T  7160712 gggttgagtgtctttgtagtgaggttctcttggattgggaaacattgtaatcaccttggacagtgagatttcatcattggaaggatcaaaaagcttcatt 7160811  T
Q  221 ttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaagtc-tgttcttcgtgagcttttaagctaatttctagtaa 319  Q
    || ||||||||||||| ||||||||||||||| |||||||| ||||||  |||||||||||||| ||||||| ||||||||| || ||||||| | ||||    
T  7160812 ttatgttttctcttaggattcattgagagtgt-agtgacttaaaaaatatgtagaaattaagtcttgttctttgtgagctttaaatctaattttttgtaa 7160910  T
Q  320 cccc-ttatatcactttcatct 340  Q
    |||| || ||||||||||||||    
T  7160911 cccctttgtatcactttcatct 7160932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 83 - 280
Target Start/End: Complemental strand, 28832583 - 28832387
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  |||||| |||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||  || |||||||    
T  28832583 agagagagaaacttggat-tacaaaggaggtaactttagagttgagtgtctttgtagtgaggttctcttgggttgggaaacattgtaaacaccttgggta 28832485  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta 280  Q
     |||||||||||| ||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||  ||||||||||||||||||||    
T  28832484 gtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaatta 28832387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 74 - 340
Target Start/End: Original strand, 11181594 - 11181861
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatta 173  Q
    |||| |||||||||| |||||||||   |||||| |||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||  |    
T  11181594 agagcttgaagagagagaaacttggtt-tacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctcttgggttgggaaacattgtaaaca 11181692  T
Q  174 ctttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggta 273  Q
    | ||||||| ||| |||||||| ||| |||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| || ||||||||||    
T  11181693 ccttgggtagtgaaatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattgtgagtgtgggtgacatg-aaaatgggta 11181791  T
Q  274 gaaattaagtc-tgttc-ttcgtgagcttttaagctaatttctagtaac-cccttatatcactttcatct 340  Q
    ||||||| ||| ||||| || | ||||||||| |||||||||| ||||| |  || ||||||||||||||    
T  11181792 gaaattaggtcttgttcatttgagagcttttaggctaatttcttgtaactcatttgtatcactttcatct 11181861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 102 - 280
Target Start/End: Original strand, 24553316 - 24553494
Alignment:
Q  102 tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaa 201  Q
    |||||| |||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||  || ||||||| |||||||||||| ||  |    
T  24553316 tacaaaggaggtaacttaagggttgagtgtctttgtagtgaggttctcttgggttgggaaacattgtaaacaccttgggtagtgagatttcaccattaga 24553415  T
Q  202 agggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta 280  Q
    ||| ||||||||||||||||||||||||||||||||||||||| |||||||| || |  | ||||||||||||||||||    
T  24553416 aggatcaaaaagcttccttttgtgttttctcttagaattcattaagagtgtgggtcatataaaaaatgggtagaaatta 24553494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 83 - 280
Target Start/End: Original strand, 31300366 - 31300562
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  | |||| |||||||||||| | |||||||||||| ||||||||||||||||||||| ||||||||||||  || |||||||    
T  31300366 agagagagaaacttggat-tgcaaaggaggtaactttaaggttgagtgtctttgtagtgaggttctcttgggttgagaaacattgtaaacaccttgggta 31300464  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta 280  Q
     |||||||||||| ||| |||| |||||| |||||||||||||||||||||||| |||||||||||||||| ||||  ||| ||||||||||||||||    
T  31300465 gtgagatttcaccattggaaggatcaaaaggcttccttttgtgttttctcttaggattcattgagagtgtgggtgatatgagaaatgggtagaaatta 31300562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 98 - 340
Target Start/End: Original strand, 33030724 - 33030969
Alignment:
Q  98 gaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgt 197  Q
    ||||||||||||||||||||||||| |||||| | ||| ||  ||||||||||||||||| |||| |||||||| |  ||||||| |||||||||||| |    
T  33030724 gaaatacaaaagaggtaactttagggttgagtat-tttgtaacgaggttctcttgggttgagaaatattgtaatcatcttgggtagtgagatttcaccat 33030822  T
Q  198 tgaaagggtcaaaaagcttccttttgtgtttt-----ctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag-tctgttctt 291  Q
    ||| |    ||||||||||||||| |||||||     ||||||| ||||||||||||||||||||||||||||||||||||||||||| | | |||||||    
T  33030823 tgagaa---caaaaagcttcctttagtgttttaatttctcttaggattcattgagagtgtgagtgacttgaaaaatgggtagaaattatgttttgttctt 33030919  T
Q  292 cgtgagcttttaagctaatttctagtaacccc-ttatatcactttcatct 340  Q
     |||||||||||||||||||||| |||||||| ||  |||||||||||||    
T  33030920 tgtgagcttttaagctaatttcttgtaaccccattgcatcactttcatct 33030969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 84 - 320
Target Start/End: Complemental strand, 10282080 - 10281840
Alignment:
Q  84 gagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaattactttgggt 181  Q
    ||||| ||||||||  |||||||| |||||||||||||| |||||||||||| ||||||||||||||||  ||||| ||||||||||||  || ||||||    
T  10282080 gagagagaaacttgagaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttgtgaaacattgtaaacaccttgggt 10281981  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcat--tgagagtgtgagtgacttgaaaaatgggtagaaatt 279  Q
    | |||||||||||| ||| |||| ||||||||||| ||||||||||||||||||| ||||||  || ||||||| |||||    ||||||||||||||||    
T  10281980 agtgagatttcaccattggaaggatcaaaaagctttcttttgtgttttctcttaggattcatattgtgagtgtgggtgacac--aaaatgggtagaaatt 10281883  T
Q  280 aagtc-tgttctt-cgtgagcttttaagctaatttctagtaac 320  Q
    | ||| |||||||  || ||||| ||||||||||||| |||||    
T  10281882 aggtcttgttcttgtgtaagcttgtaagctaatttcttgtaac 10281840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 83 - 243
Target Start/End: Original strand, 17003730 - 17003889
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  |||||| ||| |||||||||| |||| ||||||| |||||||||||||||||||| |||||||||||||  || |||||||    
T  17003730 agagagagaaacttggat-tacaaaggagataactttagggttgaatgtctttgtagtgaggttctcttgggtttggaaacattgtaaacaccttgggta 17003828  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcat 243  Q
     |||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  17003829 gtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcat 17003889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 71 - 236
Target Start/End: Original strand, 11916731 - 11916894
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||| ||| ||||||||||  |||||| |||||||||||||| |||||| ||||| |||||||| |||||||||||||||||||||||||    
T  11916731 aggagagcttgaagtgagagaaacttggat-tacaaaggaggtaactttagggttgagtttctttgtagtgaggatctcttgggttgggaaacattgtaa 11916829  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttag 236  Q
      || ||||||| |||||||||||| ||| |||| ||||||| |||||||||||||||||||||||    
T  11916830 acaccttgggtagtgagatttcaccattggaaggatcaaaaa-cttccttttgtgttttctcttag 11916894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 104 - 259
Target Start/End: Complemental strand, 19589051 - 19588896
Alignment:
Q  104 caaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaag 203  Q
    |||| ||||||| |||||| |||||||||||| |||||||| |||||||||||||||||||||||||  |  ||||| | |||||||||||| ||| |||    
T  19589051 caaaggaggtaattttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaacatcttgggcagtgagatttcaccattggaag 19588952  T
Q  204 ggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgac 259  Q
    | ||||||| ||||||||||||||||||||||| ||||||||||| |||| |||||    
T  19588951 gatcaaaaatcttccttttgtgttttctcttaggattcattgagattgtgggtgac 19588896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 71 - 234
Target Start/End: Complemental strand, 14520568 - 14520407
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||| ||  |||||| |||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||    
T  14520568 aggagagcttgaagagagagaaacttagat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaa 14520470  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
      || |||| || |||||||||||| ||| |||| || |||||||||||||||||| |||||||    
T  14520469 acaccttggatagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 14520407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 80 - 234
Target Start/End: Original strand, 9353100 - 9353252
Alignment:
Q  80 tgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgg 179  Q
    ||||||||| ||||||||||  |||||| |||||||||||||| || ||||||||| |||||||| |||||||||||||||||||||||||  || ||||    
T  9353100 tgaagagagagaaacttggat-tacaaaggaggtaactttagggttaagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgg 9353198  T
Q  180 gtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    ||| |||||||||||| ||| |||| || |||||||||||||||||| |||||||    
T  9353199 gtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 9353252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 114 - 320
Target Start/End: Complemental strand, 6742148 - 6741941
Alignment:
Q  114 aactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta--atgagatttcaccgttgaaagggtcaaaa 211  Q
    ||||||||| ||||||||||||||| ||| ||||||||| |||| |||||||| || | | ||||| ||  ||||||||||||| |||||||  ||||||    
T  6742148 aactttagggttgagtgtctttatactgaagttctcttgagttgagaaacattatattcattttggatataatgagatttcaccattgaaagaatcaaaa 6742049  T
Q  212 agcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag-tctgttcttcgtgagcttttaagctaat 310  Q
    || |||  | |||||||| |||||| |||||||||||||||| ||||||||||||||| |||||||||| | | ||||||| ||||| ||  ||||||||    
T  6742048 agattc--tctgtgttttttcttaggattcattgagagtgtgggtgacttgaaaaatgagtagaaattaggttttgttctttgtgagtttgcaagctaat 6741951  T
Q  311 ttctagtaac 320  Q
    |||| |||||    
T  6741950 ttcttgtaac 6741941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 71 - 234
Target Start/End: Complemental strand, 15464872 - 15464711
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||||  ||||||  ||| ||||||||| |||||||||||| |||||||| |||||||||||||||||||| ||||    
T  15464872 aggagagcttgaagagagagaaacttggat-tacaaagaaggaaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacatcgtaa 15464774  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
      || ||||||| |||||||||||| ||| |||| || |||||||||||||||||| |||||||    
T  15464773 acaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 15464711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 71 - 339
Target Start/End: Original strand, 12083936 - 12084203
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| | |||| ||| ||||||||||  |||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||    
T  12083936 aggagagctagaagtgagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttatagtgaggatctcttgggttggtaaacattttaa 12084034  T
Q  171 ttactttgggtaatgagatttcacc-gttgaaagggtcaaaaagcttccttttgtgttttctcttagaattc--attgagagtgtgagtgacttgaaaaa 267  Q
      || ||||||| ||||| ||||||  ||| |||| |  ||||||||||||||||||||| |||||| ||||  |||| ||| ||| |||||   | |||    
T  12084035 acaccttgggtagtgagaattcaccatttggaaggat--aaaagcttccttttgtgttttttcttaggattcatattgtgagagtgggtgac---acaaa 12084129  T
Q  268 tgggtagaaattaagtc-tgttctt-cgtgagcttttaagctaatttctagtaaccccttatatcactttcatc 339  Q
    ||||||||||||| ||| |||||||  || |||||||||| |||||||| ||||| | || || ||||||||||    
T  12084130 tgggtagaaattaggtcttgttcttgtgtaagcttttaagttaatttcttgtaactctttgtaacactttcatc 12084203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 176 - 340
Target Start/End: Original strand, 42127273 - 42127439
Alignment:
Q  176 ttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtaga 275  Q
    ||||||| |||||||||||| ||| |||| ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||  |||||||||||||||    
T  42127273 ttgggtagtgagatttcaccattggaaggatcaaaaagctttcttttgtgttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtaga 42127372  T
Q  276 aattaagtc-tgttc-ttcgtgagcttttaagctaatttctagtaaccccttatatcactttcatct 340  Q
    || || | | ||||| || || ||||| ||||||||||||| ||||| | || || |||||||||||    
T  42127373 aagtaggacttgttcttttgtaagcttataagctaatttcttgtaactcattgtaacactttcatct 42127439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 36932116 - 36932265
Alignment:
Q  80 tgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgg 179  Q
    ||||||||| ||||||||||  | |||| |||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||  || ||||    
T  36932116 tgaagagagagaaacttggat-tgcaaaggagggaactttagggttgagtgtctttatagtgatgatctcttgggttgggaaacattgtaaacaccttgg 36932214  T
Q  180 gtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttct 231  Q
    ||| |||||||||||| ||| |||| || ||||||||||| |||||| ||||    
T  36932215 gtagtgagatttcaccattggaaggatc-aaaagcttcctcttgtgtcttct 36932265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 100 - 243
Target Start/End: Complemental strand, 3880612 - 3880467
Alignment:
Q  100 aatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaattactttgggtaatgagatttcaccgt 197  Q
    |||||||| |||||||||| ||  ||||||||| || ||||||||||||||||  ||||| ||||||||||||  || ||||||  |||||||||||| |    
T  3880612 aatacaaaggaggtaacttgagagttgagtgtccttgtagtgaggttctcttgagggttgagaaacattgtaaacacattgggttgtgagatttcaccat 3880513  T
Q  198 tgaaagggtcaaaaagcttccttttgtgttttctcttagaattcat 243  Q
    || |||| ||||||||||||||||||| ||||||| ||| ||||||    
T  3880512 tggaaggatcaaaaagcttccttttgttttttctcctaggattcat 3880467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 188 - 339
Target Start/End: Complemental strand, 2630453 - 2630300
Alignment:
Q  188 atttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag-tctg 286  Q
    |||||||| |||||||| |||||||||||||||| |||||||||||||| |||||||| ||||| | |||||||||||||||  || |||||| | | ||    
T  2630453 atttcaccattgaaaggatcaaaaagcttcctttagtgttttctcttaggattcattgtgagtgagggtgacttgaaaaatgtataaaaattaggttttg 2630354  T
Q  287 ttcttcgtgagcttttaagctaatttctagtaaccc-cttatatcactttcatc 339  Q
    ||||| ||| | |||||||||||||| | |||||||  || |||||||||||||    
T  2630353 ttctttgtgtgtttttaagctaatttattgtaacccttttgtatcactttcatc 2630300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 234
Target Start/End: Complemental strand, 38219728 - 38219577
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttggg--aaacattgtaattactttggg 180  Q
    |||||| ||||||||||  |||||| |||| |||| |||| |||||||||||| |||||||| ||||||||||||||  |||||||||||  || |||||    
T  38219728 agagagagaaacttggat-tacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttggg 38219630  T
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    || |||||||||||| ||| |||| ||  |||||||||| |||||| |||||||    
T  38219629 tagtgagatttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 38219577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 42127159 - 42127268
Alignment:
Q  102 tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaa 201  Q
    |||||| |||||||||||| | |||||| ||||| ||||||||||||||||||||| |||||||||||   || ||||||| |||||||||||| ||| |    
T  42127159 tacaaaggaggtaactttaaggttgagtatctttgtagtgaggttctcttgggttgagaaacattgtatacaccttgggtagtgagatttcaccattgga 42127258  T
Q  202 agggtcaaaa 211  Q
    ||| ||||||    
T  42127259 aggatcaaaa 42127268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 234
Target Start/End: Complemental strand, 35387974 - 35387841
Alignment:
Q  102 tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgg--gaaacattgtaattactttgggtaatgagatttcaccgttg 199  Q
    |||||| |||| |||| |||| |||||||||||| ||| |||| |||||||||||||   |||||||||||| || ||||||| |||||||||||| |||    
T  35387974 tacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttggaaaaaacattgtaatcaccttgggtagtgagatttcaccattg 35387875  T
Q  200 aaagggtcaaaaagcttccttttgtgttttctctt 234  Q
     |||| || |||| |||||| | |||| |||||||    
T  35387874 gaaggatctaaaa-cttcctctagtgtcttctctt 35387841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 170
Target Start/End: Complemental strand, 39468855 - 39468757
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | |   |||||||||||||||||||||||||||    
T  39468855 aggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-cattagagttctcttgggttgggaaacattgtaa 39468757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 13239617 - 13239712
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||||||||||| ||||||| ||||  |||| |||||||||||| | ||||| ||||||  | |   |||||||||||||||||||||||||||    
T  13239617 agagtttgaagagagagaaacttagaaaatcaaaggaggtaactttatggttgagggtcttt-gattagagttctcttgggttgggaaacattgtaa 13239712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 218 - 305
Target Start/End: Complemental strand, 34842795 - 34842707
Alignment:
Q  218 cttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag-tctgttcttcgtgagcttttaag 305  Q
    |||| |||| |||||||||||||||||| | || | |||||||||||||||| |||||||||| | | ||||||| |||||||| ||||    
T  34842795 ctttagtgtgttctcttagaattcattgtgggttttagtgacttgaaaaatgagtagaaattaggatatgttcttggtgagcttgtaag 34842707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 33831692 - 33831754
Alignment:
Q  262 gaaaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    ||||||||||||||||||| || ||||||| |||||||  ||||||||||||||| |||||||    
T  33831692 gaaaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaaccc 33831754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 28750959 - 28750866
Alignment:
Q  73 gagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattg 167  Q
    ||||| |||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | |   ||||||||||||||||||||||||    
T  28750959 gagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-gattagagttctcttgggttgggaaacattg 28750866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 321
Target Start/End: Complemental strand, 30900068 - 30899955
Alignment:
Q  208 aaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta-agtctgttcttcgtgagcttttaagc 306  Q
    ||||||||| |||| |||||||||| ||| |||| ||| | || |||||| ||||||||||  ||||||| || ||| ||||||| |||||||| || ||    
T  30900068 aaaaagctttctttagtgttttctc-taggattctttgtgggtttgagtggcttgaaaaatcagtagaaaatagagtttgttctttgtgagcttgtaggc 30899970  T
Q  307 taatttctagtaacc 321  Q
    |||||||| ||||||    
T  30899969 taatttcttgtaacc 30899955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 37439010 - 37439072
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtct 133  Q
    ||||||| |||||||||| ||||||||||||  |||| |||||||||||||| ||||| ||||    
T  37439010 aggagagcttgaagagagagaaacttggaaaatcaaatgaggtaactttagggttgagggtct 37439072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 312
Target Start/End: Complemental strand, 5611371 - 5611239
Alignment:
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattga-gagtgtgagtgacttgaaaaatgggtagaaatt 279  Q
    |||||||||||||   |||||| | ||||||||||| |||| |||||||||||||| | ||||| | ||||||   |||||| |||||||| |||||||     
T  5611371 taatgagatttcattattgaaaagatcaaaaagcttgctttagtgttttctcttaggaatcatttatgagtgtttatgactt-aaaaatggatagaaata 5611273  T
Q  280 a-agtctgttcttcgtgagcttttaagctaattt 312  Q
    | | | ||||||| |||| |||||||||||||||    
T  5611272 agattttgttctttgtgaacttttaagctaattt 5611239  T

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Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 13488065 - 13488163
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| | |||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | |   ||||||||||||||| |||||||||||    
T  13488065 aggagagctagaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-gattagagttctcttgggttggaaaacattgtaa 13488163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 16452092 - 16452154
Alignment:
Q  262 gaaaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    |||||||||||||||||||||| |||||||  ||||||  || |||||||||||| |||||||    
T  16452092 gaaaaatgggtagaaattaagtttgttctttctgagcttgttgaagctaatttcttgtaaccc 16452154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 8566100 - 8566040
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    ||||||||||||| ||| || ||||||| |||||||  ||||||||||||||| |||||||    
T  8566100 aaaatgggtagaacttaggtttgttctttgtgagcttgtttaagctaatttcttgtaaccc 8566040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 280
Target Start/End: Complemental strand, 3651658 - 3651630
Alignment:
Q  252 tgagtgacttgaaaaatgggtagaaatta 280  Q
    |||||||||||||||||||||||||||||    
T  3651658 tgagtgacttgaaaaatgggtagaaatta 3651630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 42426541 - 42426477
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtcttt 135  Q
    ||||||| ||||| |||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||    
T  42426541 aggagagcttgaaaagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt 42426477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 3e-51; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 83 - 280
Target Start/End: Complemental strand, 31936901 - 31936707
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  | |||| |||||||||||||| |||||||||||| |||||||| ||| |||||||||||||||||||||  || |||||||    
T  31936901 agagagagaaacttggat-tgcaaaggaggtaactttagggttgagtgtctttgtagtgaggatctattgggttgggaaacattgtaaacaccttgggta 31936803  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta 280  Q
     |||||||||||| ||| |||| ||||||||||||  ||||||||||||||||| |||||||||||||||| ||||  ||||||||||||||||||||    
T  31936802 gtgagatttcaccattggaaggatcaaaaagcttc--tttgtgttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaatta 31936707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 83 - 320
Target Start/End: Complemental strand, 31979838 - 31979602
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  | |||| |||||||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||  || |||||||    
T  31979838 agagagagaaacttggac-tgcaaaggaggtaactttagggttgagtgtctttgtagtgaggttcttttgggttgagaaacattgtaaacaccttgggta 31979740  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag 282  Q
     |||||||||||| ||| |||| || |||||||||||||||||||||||||||| |||||||||||||||| |||||   |||||||||||||||||| |    
T  31979739 gtgagatttcaccattggaaggatc-aaaagcttccttttgtgttttctcttaggattcattgagagtgtgggtgac-acaaaaatgggtagaaattagg 31979642  T
Q  283 tc-tgttc-ttcgtgagcttttaagctaatttctagtaac 320  Q
    || ||||| || || ||||| |||| |||||||| |||||    
T  31979641 tcttgttcttttgtaagcttataagttaatttcttgtaac 31979602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 84 - 320
Target Start/End: Original strand, 21801113 - 21801352
Alignment:
Q  84 gagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaattactttgggt 181  Q
    ||||| ||||||||  ||||||||  ||||||||| ||| |||||||||||| ||||||||||||||||  ||||||||||||||||||  || ||||||    
T  21801113 gagagagaaacttgagaatacaaagcaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 21801212  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattca-ttgagagtgtgagtgacttgaaaaatgggtagaaatta 280  Q
    | |||||||||| | ||| |||| |||||||||||||||||||||||||||||||  |||| ||||||||||| |||||    |||||||||||||||||    
T  21801213 agtgagatttcaacattggaaggatcaaaaagcttccttttgtgttttctcttagggttcatttgagagtgtgggtgac--acaaaatgggtagaaatta 21801310  T
Q  281 agtc-tgttc-ttcgtgagcttttaagctaatttctagtaac 320  Q
    |||| ||||| || || ||||| |||| |||||||| |||||    
T  21801311 agtcttgttcttttgtaagcttataagataatttcttgtaac 21801352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 79 - 319
Target Start/End: Original strand, 24435739 - 24435978
Alignment:
Q  79 ttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttg 178  Q
    |||||||||| |||||| |||  |||||| ||| |||||||||| |||||||||||| | |||||||||||||| |||||||||||||||||  || |||    
T  24435739 ttgaagagagagaaactaggat-tacaaaggagataactttagggttgagtgtctttgt-gtgaggttctcttgagttgggaaacattgtaaacaccttg 24435836  T
Q  179 ggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaat 278  Q
    |||| |||||||||||| ||| |||| ||||||||||||||||||||||||||||||| |||||||  || |||| |||| |  ||||||||||||||||    
T  24435837 ggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattatgaatgtgggtga-tataaaaatgggtagaaat 24435935  T
Q  279 taagtct--gttcttcgtgagcttttaagctaatttctagtaa 319  Q
    || ||||   || || || ||||| ||||||||||||| ||||    
T  24435936 taggtcttgtttttttgtaagcttataagctaatttcttgtaa 24435978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 83 - 320
Target Start/End: Original strand, 5572014 - 5572249
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggta 182  Q
    |||||| ||||||||||  |||||  |||||||||||||| ||| |||||||| ||||| || |||||||||||||||||||||||||  || |||||||    
T  5572014 agagagagaaacttggat-tacaatggaggtaactttagggttgggtgtctttgtagtggggatctcttgggttgggaaacattgtaaacaccttgggta 5572112  T
Q  183 atgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag 282  Q
     |||||||||||  ||| || | || |||||||||||||||||||||||||||| |||||||||||||||| |||||    |||||| |||||||||| |    
T  5572113 gtgagatttcactattggaatgatc-aaaagcttccttttgtgttttctcttaggattcattgagagtgtgggtgac--acaaaatgcgtagaaattagg 5572209  T
Q  283 tc-tgttctt-cgtgagcttttaagctaatttctagtaac 320  Q
    || |||||||  || ||||| ||||||||||||| |||||    
T  5572210 tcttgttcttgtgtaagcttataagctaatttcttgtaac 5572249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 100 - 312
Target Start/End: Complemental strand, 14521986 - 14521770
Alignment:
Q  100 aatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaattactttgggtaatgaga-tttcaccg 196  Q
    |||||||| |||||||||||||| || | ||||||| |||| |||||||||||  ||||||||||||||||||  || ||||||| ||||| |||||||     
T  14521986 aatacaaatgaggtaactttagggtttaatgtctttgtagttaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagaatttcacca 14521887  T
Q  197 ttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaag-tctgttcttcgtg 295  Q
    ||| |||| | ||||| ||||||||  ||||||||||||| ||| |||||||||||| ||||| ||||||||| |||||||||| | | ||||||| |||    
T  14521886 ttggaaggataaaaaatcttcctttaatgttttctcttaggatttattgagagtgtgggtgacatgaaaaatgtgtagaaattaggttgtgttctttgtg 14521787  T
Q  296 agcttttaagctaattt 312  Q
    |||| ||  ||||||||    
T  14521786 agctcttgtgctaattt 14521770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 102 - 280
Target Start/End: Complemental strand, 22964007 - 22963829
Alignment:
Q  102 tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaa 201  Q
    |||||||||| |||||||||| |||||||||||| |||||| | |||||||| ||||||||||||||||  || ||||||| |||||||||||| ||| |    
T  22964007 tacaaaagagctaactttagggttgagtgtctttgtagtgaagatctcttggattgggaaacattgtaaacaccttgggtagtgagatttcaccattgga 22963908  T
Q  202 agggtcaaaaagcttccttttgtgttttctcttagaattc---attgagagtgtgagtgacttgaaaaatgggtagaaatta 280  Q
    ||| |||||||  |||| |||||||||||| |||| ||||   ||||||||||||||||||   ||||||||||||||||||    
T  22963907 aggatcaaaaa-tttccctttgtgttttcttttaggattcattattgagagtgtgagtgac--aaaaaatgggtagaaatta 22963829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 102 - 280
Target Start/End: Original strand, 23824386 - 23824564
Alignment:
Q  102 tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaa 201  Q
    |||||||||| |||||||||| |||||||||||| |||||| | |||||||| ||||||||||||||||  || ||||||| |||||||||||| ||| |    
T  23824386 tacaaaagagctaactttagggttgagtgtctttgtagtgaagatctcttggattgggaaacattgtaaacaccttgggtagtgagatttcaccattgga 23824485  T
Q  202 agggtcaaaaagcttccttttgtgttttctcttagaattc---attgagagtgtgagtgacttgaaaaatgggtagaaatta 280  Q
    ||| |||||||  |||| |||||||||||| |||| ||||   ||||||||||||||||||   ||||||||||||||||||    
T  23824486 aggatcaaaaa-tttccctttgtgttttcttttaggattcattattgagagtgtgagtgac--aaaaaatgggtagaaatta 23824564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 102 - 222
Target Start/End: Original strand, 5017285 - 5017405
Alignment:
Q  102 tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaa 201  Q
    |||||| ||| |||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||  || |||||||||||||||||||| ||| |    
T  5017285 tacaaacgagataactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaacaccttgggtaatgagatttcaccattgga 5017384  T
Q  202 agggtcaaaaagcttcctttt 222  Q
    ||| || ||||||||||||||    
T  5017385 aggatcgaaaagcttcctttt 5017405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 22709345 - 22709187
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaatta 173  Q
    |||||||||||||||  |||||||||  |||||| |||| |||| |||| |||||||||||| |||||||| |||||||||||||||||||||||||  |    
T  22709345 agagtttgaagagagaaaaacttggat-tacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaaca 22709247  T
Q  174 ctttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    | |||| || |||||||||||| ||| |||| ||||||| |||||| |||||| |||||||    
T  22709246 ccttggatagtgagatttcaccattggaaggatcaaaaa-cttcctcttgtgtcttctctt 22709187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 76 - 322
Target Start/End: Original strand, 31076699 - 31076951
Alignment:
Q  76 agtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattact 175  Q
    ||||||||||||  ||||||||| |||||||| ||| ||||| |||| |||||||||||| |||||| |||  ||||||||| ||||| ||||||  ||     
T  31076699 agtttgaagagaaagaaacttgggaatacaaaggagataactatagggttgagtgtctttgtagtgacgttgccttgggttgagaaactttgtaaacacc 31076798  T
Q  176 ttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttg-----aaaaatgg 270  Q
    || |||| |||||||||||| ||| || | |||||||  || |||| |||||||||||||| |||||| | || |||| ||||||||     ||||||||    
T  31076799 ttaggtattgagatttcaccattggaatgatcaaaaaaatttctttagtgttttctcttaggattcatagtgattgtgggtgacttgaaattaaaaatgg 31076898  T
Q  271 gtagaaattaagtc-tgttcttcgtgagcttttaagctaatttctagtaaccc 322  Q
     || |||||| ||| ||||||| |||| || |||||||||||| | |||||||    
T  31076899 ataaaaattaggtcttgttctttgtgaactcttaagctaatttattgtaaccc 31076951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 81 - 325
Target Start/End: Original strand, 31086243 - 31086486
Alignment:
Q  81 gaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttggg 180  Q
    |||||||| ||||||||||  |||||| | |||||||||||| |||||||||||| |||||||| |||||| ||||| ||||||||||||  || |||||    
T  31086243 gaagagagagaaacttggat-tacaaagggggtaactttagggttgagtgtctttgtagtgaggatctcttaggttgagaaacattgtaaacaccttggg 31086341  T
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcatt-gagagtgtgagtgacttgaaaaatgggtagaaatt 279  Q
    |  |||||||||||| ||| |||| || ||||||||| |||| ||||||||||||| |||||||   ||||||| |||||    ||||||||||||||||    
T  31086342 ttgtgagatttcaccattggaaggatc-aaaagcttctttttatgttttctcttaggattcattattgagtgtgggtgac--acaaaatgggtagaaatt 31086438  T
Q  280 aagtc-tgttctt-cgtgagcttttaagctaatttctagtaacccctt 325  Q
    | ||| || ||||  || ||||| ||||||||||||| ||||| ||||    
T  31086439 aggtcttgctcttgtgtaagcttataagctaatttcttgtaactcctt 31086486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 71 - 234
Target Start/End: Original strand, 5757237 - 5757398
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| | |||||||| ||||||||||  |||||| |||||||||||||| |||||||||||| || | ||| |||||||||||||||||||||||||    
T  5757237 aggagagctggaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtatttaggatctcttgggttgggaaacattgtaa 5757335  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
      || ||||||| |||||||||||| ||| |||| || ||||||||||||  |||| |||||||    
T  5757336 acaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttccgtgtcttctctt 5757398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 208 - 320
Target Start/End: Complemental strand, 99357 - 99245
Alignment:
Q  208 aaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatt-aagtctgttcttcgtgagcttttaagc 306  Q
    |||||||||||||| || ||||||| ||| |||||||| |||||||||| |||| ||||||||||||||||| |||| ||||||  |||||||| |||||    
T  99357 aaaaagcttcctttggtattttctcataggattcattgtgagtgtgagtaactt-aaaaatgggtagaaattaaagtttgttctctgtgagcttctaagc 99259  T
Q  307 taatttctagtaac 320  Q
    |||||||| |||||    
T  99258 taatttcttgtaac 99245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 155 - 320
Target Start/End: Complemental strand, 18233101 - 18232934
Alignment:
Q  155 ttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattc---attgagagtg 251  Q
    ||||||||||||||||  || ||||||| |||||||||||| ||| |||| |||||| |||||||||||||||||||||||| ||||   ||||||||||    
T  18233101 ttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgttttctcttaggattcattattgagagtg 18233003  T
Q  252 tgagtgacttgaaaaatgggtagaaattaagtc-tgttctt-cgtgagcttttaagctaatttctagtaac 320  Q
    || |||||    ||||||||||||||||| ||| |||||||  || ||||| |||||| |||||| |||||    
T  18233002 tgggtgac--acaaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctgatttcttgtaac 18232934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 321
Target Start/End: Original strand, 1114999 - 1115113
Alignment:
Q  208 aaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta-agtctgttcttcgtgagcttttaagc 306  Q
    |||||| |||||||||||||||||||||  |||||||| ||||||| |||||||||||||||| |||||||||  || |||| ||  ||||||||||||     
T  1114999 aaaaagtttccttttgtgttttctcttaatattcattgtgagtgtgggtgacttgaaaaatggatagaaattagggtttgttatttttgagcttttaagt 1115098  T
Q  307 taatttctagtaacc 321  Q
    | |||||| ||||||    
T  1115099 tgatttcttgtaacc 1115113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 4630211 - 4630120
Alignment:
Q  152 gggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcatt 244  Q
    ||||||||||||||| |||  || ||||||| |||||||||||| ||| |||| |||||| |||||||||||||||||||||||| |||||||    
T  4630211 gggttgggaaacattttaaacacattgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgttttctcttaggattcatt 4630120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 176 - 320
Target Start/End: Original strand, 10077031 - 10077173
Alignment:
Q  176 ttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtaga 275  Q
    ||||||| |||||||| ||| ||| |||| |||||||||||||||||||||||| |||||| ||||||||||  |||| |||||    ||||||||||||    
T  10077031 ttgggtagtgagatttgaccattggaaggatcaaaaagcttccttttgtgttttatcttaggattcattgag--tgtgggtgacac--aaaatgggtaga 10077126  T
Q  276 aattaagtc-tgttc-ttcgtgagcttttaagctaatttctagtaac 320  Q
    ||||| ||| ||||| || || ||||| ||||||||||||| |||||    
T  10077127 aattaggtcttgttcttttgtaagcttataagctaatttcttgtaac 10077173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 21272778 - 21272846
Alignment:
Q  102 tacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    |||||| | |||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||    
T  21272778 tacaaagggggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgcgaaacattgtaa 21272846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 159
Target Start/End: Complemental strand, 18234421 - 18234334
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttggg 159  Q
    ||||||| |||||||||  ||||||||||  |||||| |||||| ||||||| |||||||||||| |||||||| ||||||||||||||    
T  18234421 aggagagcttgaagagaaagaaacttggat-tacaaaggaggtagctttagggttgagtgtctttgtagtgaggatctcttgggttggg 18234334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 21356318 - 21356222
Alignment:
Q  129 tgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgt 226  Q
    ||||||| |||||||| ||||||||||| |||||||||||||  || ||||||| |||||||||| | ||| |||  || ||||||||||||||||||    
T  21356318 tgtctttgtagtgaggatctcttgggttaggaaacattgtaaacaccttgggtagtgagatttcatcattggaagaatc-aaaagcttccttttgtgt 21356222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 10076950 - 10077027
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctc 149  Q
    ||||||| || ||||||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| ||||    
T  10076950 aggagagctttaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctc 10077027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 170
Target Start/End: Complemental strand, 9183337 - 9183239
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||| ||  |||| |||||||||||||| ||||| ||||||  | |   |||||| ||||||||||||||||||||    
T  9183337 aggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggtcttt-gattagagttctcctgggttgggaaacattgtaa 9183239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 305
Target Start/End: Original strand, 30518000 - 30518121
Alignment:
Q  184 tgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaattca-ttgagagtgtgagtgacttgaaaaatgggtagaaattaa- 281  Q
    ||||||||||   ||| |||| ||||||| |||||||| ||||||||||| || ||||| ||| ||||||| || ||||||||||| ||||||||||||     
T  30518000 tgagatttcattattggaaggatcaaaaa-cttcctttagtgttttctctaag-attcatttgtgagtgtgggtaacttgaaaaataggtagaaattaag 30518097  T
Q  282 gtctgttcttcgtgagcttttaag 305  Q
    || ||||||| |||| ||||||||    
T  30518098 gtttgttctttgtgaacttttaag 30518121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 22424983 - 22424921
Alignment:
Q  262 gaaaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    ||||||||||||||||||| |  ||||||| |||||||  ||||||||||||||| |||||||    
T  22424983 gaaaaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaaccc 22424921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 208 - 321
Target Start/End: Original strand, 33721453 - 33721568
Alignment:
Q  208 aaaaagcttccttttgtgttttctcttagaattcattga-gagtgtgagtgacttgaaaaatgggtagaaattaag-tctgttcttcgtgagcttttaag 305  Q
    |||||||| ||||| |||||||||||||| ||||||| | ||||||| ||||| | |||||||||   |||||| | | |||||||  |||| ||||||     
T  33721453 aaaaagctccctttagtgttttctcttaggattcatttaggagtgtgtgtgacctaaaaaatgggggaaaattaggttttgttctttatgagtttttaaa 33721552  T
Q  306 ctaatttctagtaacc 321  Q
    ||||||||| ||||||    
T  33721553 ctaatttcttgtaacc 33721568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 5385880 - 5385771
Alignment:
Q  124 ttgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttg 223  Q
    |||||||||||| |||||||||||  |||||||  ||||||||| ||| || ||  ||| |||||||||||| ||  |||| | ||||||||| |||| |    
T  5385880 ttgagtgtctttgtagtgaggttca-ttgggttaagaaacattgcaatcaccttaagtagtgagatttcaccattagaaggataaaaaagctttctttag 5385782  T
Q  224 tgttttctctt 234  Q
    ||||| |||||    
T  5385781 tgtttcctctt 5385771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 2973093 - 2973033
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    ||||||||||||||||| || ||||||| |||||||  || |||||||||||| |||||||    
T  2973093 aaaatgggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaaccc 2973033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 170
Target Start/End: Complemental strand, 3039140 - 3039111
Alignment:
Q  141 gaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||||||||||||||||||||||||||    
T  3039140 gaggttctcttgggttgggaaacattgtaa 3039111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 28137562 - 28137502
Alignment:
Q  264 aaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    ||||||||||||||||| |  ||||||| |||||||  ||||||||||||||| |||||||    
T  28137562 aaaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaaccc 28137502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 23896687 - 23896628
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctt 134  Q
    |||| |||||||||| ||||||||||  |||||| |||||||||||||  |||||||||||    
T  23896687 agagcttgaagagagagaaacttggat-tacaaaggaggtaactttagagttgagtgtctt 23896628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 100; Significance: 2e-49; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 71 - 314
Target Start/End: Complemental strand, 6023 - 5778
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| |||| |||||  |||||| |||||||||||| | |||||||||||| |||||||| ||||||||||||| |||||||||||    
T  6023 aggagagcttgaagagagagaaaattggat-tacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttggcaaacattgtaa 5925  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaat---tcattgagagtgtgagtgacttgaaaaa 267  Q
      || ||||||| |||||||||||| ||| |||| ||||||||||||||||||||||||||||||| ||   |||||||||||||| |||||    ||||    
T  5924 acaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcatcattgagagtgtgggtgac--acaaaa 5827  T
Q  268 tgggtagaaattaagtc-tgttctt-cgtgagcttttaagctaatttct 314  Q
    || |||||||||||||| |||||||  || ||||| |||||||||||||    
T  5826 tgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttct 5778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 71 - 280
Target Start/End: Complemental strand, 2831 - 2623
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| |||| |||||  ||||||| ||||||||||||| || ||| ||||| |||||||| |||||||||||||||||||||||||    
T  2831 aggagagcttgaagagagagaaa-ttggat-tacaaaaaaggtaactttagggttaagtttctttgtagtgaggatctcttgggttgggaaacattgtaa 2734  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctcttagaat---tcattgagagtgtgagtgacttgaaaaa 267  Q
      || ||| ||| |||||||||||| ||| |||| |||||||||||||||||||||||| |||||| ||   |||||||||||||| |||||    ||||    
T  2733 acaccttgcgtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttatcttaggattcatcattgagagtgtgggtgac--acaaaa 2636  T
Q  268 tgggtagaaatta 280  Q
    |||||||||||||    
T  2635 tgggtagaaatta 2623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 71 - 234
Target Start/End: Original strand, 133038 - 133199
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| || ||||||| ||||||||||  |||||| |||| ||||||||| |||||| ||||| |||||||| |||||||||||||||||||||||||    
T  133038 aggagagcttaaagagagagaaacttggat-tacaaaggagggaactttagggttgagtttctttgtagtgaggatctcttgggttgggaaacattgtaa 133136  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
      || ||||||| |||||||||||| ||| |||| || |||||||||||||||||| |||||||    
T  133137 acaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 133199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 79 - 243
Target Start/End: Complemental strand, 86013 - 85850
Alignment:
Q  79 ttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttg 178  Q
    |||||| ||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||  ||||||    
T  86013 ttgaagtgagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaaacactttg 85915  T
Q  179 ggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtg-ttttctcttagaattcat 243  Q
    |||| |||||||||||| ||| |||| ||||||| |||||||||||| ||||||||||||||||||    
T  85914 ggtagtgagatttcaccattggaaggatcaaaaa-cttccttttgtgtttttctcttagaattcat 85850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 84; Significance: 7e-40; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 71 - 234
Target Start/End: Original strand, 36591 - 36752
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| |||||||||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| ||||||||||||| |||||||||||    
T  36591 aggagagcttgaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggaaaacattgtaa 36689  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
      || ||||||| |||||||||||| ||| |||| || |||||||||||||||||| |||||||    
T  36690 acaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 36752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 71 - 234
Target Start/End: Original strand, 43720 - 43881
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| | |||||||| ||||||||||  |||||| |||||||||||||| |||||||||||| |||||||| ||| |||||||||||||||||||||    
T  43720 aggagagctggaagagagagaaacttggat-tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatcttttgggttgggaaacattgtaa 43818  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
      || ||||||| |||||||||||| ||| |||| || |||||||||||||||||| |||||||    
T  43819 acaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 43881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 84 - 243
Target Start/End: Complemental strand, 11059 - 10897
Alignment:
Q  84 gagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctctt--gggttgggaaacattgtaattactttgggt 181  Q
    ||||| ||||||| | |||||||| |||||||||||| | |||||||||||| |||||||||||||||  |||||||||||||||||||  || ||||||    
T  11059 gagagagaaactttggaatacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 10960  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaagcttc-cttttgtgttttctcttagaattcat 243  Q
    | |||||||||||| ||| |||| ||||||||||||  |||| ||||||||||||| ||||||    
T  10959 agtgagatttcaccattggaaggatcaaaaagcttcttttttctgttttctcttaggattcat 10897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 71 - 234
Target Start/End: Original strand, 8176 - 8337
Alignment:
Q  71 aggagagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaa 170  Q
    ||||||| | |||||||| ||||||||||  |||||| |||| ||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||    
T  8176 aggagagctggaagagagagaaacttggat-tacaaaggagggaactttagggttgagtgtctttgtagtgaggatctcttgggttgggaaacattgtaa 8274  T
Q  171 ttactttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
      || ||||||| |||||||||||| ||| |||| |  |||||||||||||||||| |||||||    
T  8275 acaccttgggtagtgagatttcaccattggaaggat-taaaagcttccttttgtgtcttctctt 8337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 280
Target Start/End: Complemental strand, 23860 - 23662
Alignment:
Q  82 aagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggt 181  Q
    ||||||| ||||||||  | |||||  |||||||||||| | ||||| ||||||||||||||||||| ||||||||| ||| |||||||| || ||||||    
T  23860 aagagagagaaacttgagattacaatggaggtaactttaaggttgagcgtctttatagtgaggttctattgggttggaaaaaattgtaatcaccttgggt 23761  T
Q  182 aatgagatttcaccgttgaaagggtcaaaaa-gcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta 280  Q
    | |||||| ||||| ||  |||| | ||||| || || |||||||||||||||||| |||||||| |||||||  |||| || |||||||||||||||||    
T  23760 agtgagatgtcaccattagaaggataaaaaaggcatcattttgtgttttctcttaggattcattgtgagtgtgtctgacatg-aaaatgggtagaaatta 23662  T

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Target: scaffold0098 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 45534 - 45375
Alignment:
Q  74 agagtttgaagagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtcttta-tagtgaggttctcttgggttgggaaacattgtaatt 172  Q
    |||| |||||||||| ||||||||||  |||||| |||||||||||||| |||| |||||||  |||||||| |||||||||||| ||||||||||||      
T  45534 agagcttgaagagagagaaacttggat-tacaaaggaggtaactttagggttgaatgtcttttgtagtgaggatctcttgggttgtgaaacattgtaaac 45436  T
Q  173 actttgggtaatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    || ||||||| |||||||||||| ||| |||| || |||||||||||||||||| |||||||    
T  45435 accttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgtcttctctt 45375  T

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Target: scaffold0176 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 109 - 320
Target Start/End: Complemental strand, 17552 - 17352
Alignment:
Q  109 gaggtaactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacattgtaattactttgggtaatgagatttcaccgttgaaagggtca 208  Q
    |||||||||||| | |||||||||||| |||||  | |||||||| ||||||||||||||||  || ||||||| ||||||||||||          |||    
T  17552 gaggtaactttacggttgagtgtctttgtagtggagatctcttggattgggaaacattgtaaacaccttgggtagtgagatttcacc----------tca 17463  T
Q  209 aaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaattaagtc-tgttctt-cgtgagcttttaagc 306  Q
    |||| ||||||||||||||||||||||| ||||||| ||||||||||||||    ||||| ||||||||||| ||| |||||||  || ||||| |||||    
T  17462 aaaa-cttccttttgtgttttctcttaggattcattaagagtgtgagtgac--acaaaataggtagaaattaggtcttgttcttgtgtaagcttataagc 17366  T
Q  307 taatttctagtaac 320  Q
    |||||||| |||||    
T  17365 taatttcttgtaac 17352  T

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Target: scaffold0016 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 321
Target Start/End: Original strand, 102382 - 102503
Alignment:
Q  201 aagggtcaaaaagcttccttttgtgttttctcttagaattcattgagagtgtgagtgacttgaaaaatgggtagaaatta-agtctgttcttcgtgagct 299  Q
    |||| ||||||||| |||||| |||||||||||| ||||| |||  ||||||| ||||||||||||||||||||||||||  || |||| || |||||||    
T  102382 aaggatcaaaaagcatcctttagtgttttctcttcgaatttattatgagtgtgtgtgacttgaaaaatgggtagaaattagggtttgttttttgtgagct 102481  T
Q  300 tttaagctaatttctagtaacc 321  Q
    |||||| |||||||| ||||||    
T  102482 tttaagataatttcttgtaacc 102503  T

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Target: scaffold0188 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 17719 - 17870
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttggg--aaacattgtaattactttggg 180  Q
    |||||| ||||||||||  |||||| |||| |||| |||| |||||||||||| ||| |||| ||||||||||||||  |||||||||||| || |||||    
T  17719 agagagagaaacttggat-tacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaatcaccttggg 17817  T
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    || |||||||||||| ||| |||| ||  |||||||||| |||||| |||||||    
T  17818 tagtgagatttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 17870  T

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Target: scaffold0188; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 234
Target Start/End: Original strand, 23812 - 23963
Alignment:
Q  83 agagagggaaacttggaaatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctcttgggttggg--aaacattgtaattactttggg 180  Q
    |||||| ||||||||||  |||||| |||| |||| |||| |||||||||||| ||| |||| ||||||||||||||  |||||||||||| || |||||    
T  23812 agagagagaaacttggat-tacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaatcaccttggg 23910  T
Q  181 taatgagatttcaccgttgaaagggtcaaaaagcttccttttgtgttttctctt 234  Q
    || |||||||||||| ||| |||| ||  |||||||||| |||||| |||||||    
T  23911 tagtgagatttcaccattggaaggatc-taaagcttcctcttgtgtcttctctt 23963  T

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Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 216 - 321
Target Start/End: Complemental strand, 14878 - 14770
Alignment:
Q  216 tccttttgtgttttctcttagaattca--ttgagagtgtgagtgacttgaaaaatgggtagaaatta-agtctgttcttcgtgagcttttaagctaattt 312  Q
    |||||| |||||||||||||| |||||  ||| ||||||| |||||||||||||| ||||| || ||  ||  |||||| ||||||||||||||||||||    
T  14878 tcctttagtgttttctcttaggattcactttgtgagtgtgggtgacttgaaaaataggtaggaactagggttagttctttgtgagcttttaagctaattt 14779  T
Q  313 ctagtaacc 321  Q
    || ||||||    
T  14778 ctcgtaacc 14770  T

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Target: scaffold0477 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 5743 - 5794
Alignment:
Q  100 aatacaaaagaggtaactttaggattgagtgtctttatagtgaggttctctt 151  Q
    |||||||| |||||||||| ||| |||||||||||| |||||||||||||||    
T  5743 aatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctctt 5794  T

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Target: scaffold0466 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 7339 - 7401
Alignment:
Q  262 gaaaaatgggtagaaattaagtctgttcttcgtgagct--tttaagctaatttctagtaaccc 322  Q
    |||||||||||||||||||||  ||||||| |||||||  || |||||||||||| |||||||    
T  7339 gaaaaatgggtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaaccc 7401  T

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Target: scaffold0060 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 33368 - 33421
Alignment:
Q  113 taactttaggattgagtgtctttatagtgaggttctcttgggttgggaaacatt 166  Q
    |||||||||| |||| ||||||| |||||| | ||||||||||||| |||||||    
T  33368 taactttagggttgaatgtctttgtagtgacgatctcttgggttggaaaacatt 33421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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