View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1255_low_2 (Length: 511)
Name: NF1255_low_2
Description: NF1255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1255_low_2 |
 |  |
|
| [»] scaffold0170 (1 HSPs) |
 |  |  |
|
| [»] scaffold0016 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 344; Significance: 0; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 25 - 504
Target Start/End: Complemental strand, 7737323 - 7736845
Alignment:
| Q |
25 |
catcatcactacccaactaaccaatgtccaaattacgttcaccgtgttcaccatgtttgattatatttgtttgtgtctattgtgattgcactggctttct |
124 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7737323 |
catcttcactacccaactaaccaatgtccaaattacgttcaccgtgttcaccatgtttgattatatttgtttgtgtctattgtgattgcactggctttct |
7737224 |
T |
 |
| Q |
125 |
cttttgtactaatgttttaagcaatgaagtatgtgcatgccacttgctatagtagtaaatagtgtgctacgaattatttgtatctagctaccaactaaca |
224 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7737223 |
cttttgtattaatgttttaagcaatgaagtatgtgcatgccacttgctatagtagtaaatagtgtgctacgaattatttgtatctagctaccaactaaca |
7737124 |
T |
 |
| Q |
225 |
catttgagtaaatggaatgcatgaatgcgacgtcatgcccgtatggatgaggcattggtaagtgtgttgatcataaaaatataatatcccacttgaaatg |
324 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7737123 |
catttgagtaaatggaatgcatgaatgcgacgtcatgcccgtatggatgaggcattggtaagtgtgttgatcataaaaatataatatcccacttgaaatg |
7737024 |
T |
 |
| Q |
325 |
gttagaaaacccatacttccaatgattcaaattgnnnnnnnnnnncctttcgcacc-gtttccaaccaaccaacggtggatggctaatttggctcgtaag |
423 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||||| |||||||| ||||||||||| || ||||||| || || ||||| |
|
|
| T |
7737023 |
gttagaaaacccatacttccaatgattcaattt--ttttattttttctttcgcaccggtttccaatcaaccaacggtcgacggctaatctgacttgtaag |
7736926 |
T |
 |
| Q |
424 |
tagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgttcttagaataatct |
504 |
Q |
| |
|
|||| | ||| |||||| |||||||||||| ||||||||||||||| | |||||||||| ||||| |||||||| |||| |
|
|
| T |
7736925 |
tagagatatgtgcactgaccaaacgttgtttgtcctgagaatcgaactcgatattcctcgggtacgtccttagaatgatct |
7736845 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 392 - 490
Target Start/End: Complemental strand, 12081994 - 12081896
Alignment:
| Q |
392 |
accaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
||||| |||||| | |||||| ||||||| ||||| |||||||||||||||| |||||||| ||||||||||||| | ||||||| ||||||||| |
|
|
| T |
12081994 |
accaaaggtggacgactaattcggctcgtgcgtagatgcatgcgcactggccaagcgttgttccccctgagaatcgaacccagtattccccggatacgt |
12081896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 490
Target Start/End: Original strand, 5731919 - 5732039
Alignment:
| Q |
371 |
ctttcgcaccg-tttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaa |
469 |
Q |
| |
|
||||||||||| ||||| ||| || || |||| | | ||||| |||||| || ||||| |||||||||||||||| |||||||| ||||| |||||||| |
|
|
| T |
5731919 |
ctttcgcaccggtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa |
5732018 |
T |
 |
| Q |
470 |
tctggtattcctcggatacgt |
490 |
Q |
| |
|
| |||||||| ||| ||||| |
|
|
| T |
5732019 |
cccggtattccccgggtacgt |
5732039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 7768181 - 7768105
Alignment:
| Q |
37 |
ccaactaaccaatgtccaaattacgttcaccgtgttcaccatgtttgattatatttgtttgtgtctattgtgattgcact |
116 |
Q |
| |
|
||||||| | |||| |||||||||||||||| |||||||||||||| |||| ||||||| | ||||||||||||||||| |
|
|
| T |
7768181 |
ccaactaccaaatgaccaaattacgttcaccatgttcaccatgtttaatta-atttgtt--tttctattgtgattgcact |
7768105 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 21149782 - 21149730
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctc |
482 |
Q |
| |
|
|||||||||||| |||||||||||| ||||| ||||||| |||||||||||| |
|
|
| T |
21149782 |
catgcgcactggtcaaacgttgttccccctgaaaatcgaacctggtattcctc |
21149730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 490
Target Start/End: Complemental strand, 42086435 - 42086315
Alignment:
| Q |
371 |
ctttcgcaccg-tttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaa |
469 |
Q |
| |
|
||||||||||| ||||| ||| ||||| |||||| | ||||| ||||| | ||||| |||||||||||| ||| |||||||| |||| |||||||| |
|
|
| T |
42086435 |
ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaa |
42086336 |
T |
 |
| Q |
470 |
tctggtattcctcggatacgt |
490 |
Q |
| |
|
| |||||||||||| ||||| |
|
|
| T |
42086335 |
cccggtattcctcgggtacgt |
42086315 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 501
Target Start/End: Complemental strand, 24875409 - 24875322
Alignment:
| Q |
414 |
ggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgttcttagaataa |
501 |
Q |
| |
|
||||||| ||||| ||||||||||||| |||||||||||| ||| ||||||||| ||| ||||| | || ||||| ||| |||||| |
|
|
| T |
24875409 |
ggctcgtgcgtagagacatgcgcactggtcaaacgttgttctccctaagaatcgaacctgatattctttgggtacgtccttggaataa |
24875322 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 494
Target Start/End: Original strand, 41163512 - 41163582
Alignment:
| Q |
423 |
gtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgttctt |
494 |
Q |
| |
|
||||| ||||| |||||||||||||||||||| |||| |||||||| | |||||||| ||| ||||||||| |
|
|
| T |
41163512 |
gtagagacatgtgcactggccaaacgttgttc-ccctgggaatcgaacccggtattccccgggtacgttctt |
41163582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 479
Target Start/End: Complemental strand, 9805112 - 9805003
Alignment:
| Q |
371 |
ctttcgcacc-gtttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaa |
469 |
Q |
| |
|
|||||||||| |||||| ||| ||||| |||||| | ||||| ||||| | ||||| |||||||||||||||| |||||||| |||| |||||||| |
|
|
| T |
9805112 |
ctttcgcacctgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa |
9805013 |
T |
 |
| Q |
470 |
tctggtattc |
479 |
Q |
| |
|
| ||||||| |
|
|
| T |
9805012 |
cccggtattc |
9805003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 490
Target Start/End: Complemental strand, 23383702 - 23383645
Alignment:
| Q |
433 |
gcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
||||||||||||| |||||||| |||| |||||||| | |||||||||| ||||||| |
|
|
| T |
23383702 |
gcgcactggccaagcgttgttccccctgggaatcgaacccggtattcctctgatacgt |
23383645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 7866629 - 7866569
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
||||| |||||||||| |||||||| |||| |||||||| | |||||||||||| ||||| |
|
|
| T |
7866629 |
catgcacactggccaagcgttgttcctcctcggaatcgaacccggtattcctcgggtacgt |
7866569 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 373 - 498
Target Start/End: Original strand, 295534 - 295659
Alignment:
| Q |
373 |
ttcgcaccg-tttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatc |
471 |
Q |
| |
|
||||||||| |||| |||| |||||||||||| | ||||| ||| |||| ||||| ||||||||||||||||||||||||| | ||| |||||||||| |
|
|
| T |
295534 |
ttcgcaccggtttcaaacccaccaacggtggacgactaatctggttcgtgcgtagaggcatgcgcactggccaaacgttgttcct-ctgggaatcgaatc |
295632 |
T |
 |
| Q |
472 |
tggtattcctcggatacgttcttagaa |
498 |
Q |
| |
|
||||||||| ||||||||| ||||||| |
|
|
| T |
295633 |
tggtattccccggatacgtccttagaa |
295659 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 484
Target Start/End: Complemental strand, 4736708 - 4736595
Alignment:
| Q |
371 |
ctttcgcaccgtttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaat |
470 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||| | |||||| |||| ||| ||||| ||||| || ||||||||||||||| |||||||| ||| |
|
|
| T |
4736708 |
ctttcgcaccgtttccgacccaccaacggtgggcgactaattcggcttgtacgtagaggcatgcacattggccaaacgttgtttccactgagaattgaac |
4736609 |
T |
 |
| Q |
471 |
ctggtattcctcgg |
484 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
4736608 |
ccggtattcctcgg |
4736595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 398 - 471
Target Start/End: Complemental strand, 14859375 - 14859302
Alignment:
| Q |
398 |
ggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatc |
471 |
Q |
| |
|
|||||||| ||||| |||||||| ||||| ||||||||||||| ||||| |||||| |||||| ||||||||| |
|
|
| T |
14859375 |
ggtggatgactaatctggctcgtgcgtagagacatgcgcactggtcaaacattgttcctcctgaaaatcgaatc |
14859302 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 482
Target Start/End: Complemental strand, 14124128 - 14124016
Alignment:
| Q |
371 |
ctttcgcaccg-tttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaa |
469 |
Q |
| |
|
||||||||||| ||||||||| ||||| |||| | ||||| ||||||| ||||| ||||||||||||||||| ||||||| |||| |||||||| |
|
|
| T |
14124128 |
ctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgtgtagaggcatgcgcactggccaaatgttgttccccctgggaatcgaa |
14124029 |
T |
 |
| Q |
470 |
tctggtattcctc |
482 |
Q |
| |
|
|||||||||||| |
|
|
| T |
14124028 |
cctggtattcctc |
14124016 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 53599112 - 53599052
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||||| | |||||||| ||| ||||| |
|
|
| T |
53599112 |
catgcgcactggccaaacgttgttcctcctgggaatcgaacccggtattccccgggtacgt |
53599052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 490
Target Start/End: Original strand, 5472907 - 5472967
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||| || |||||||||| ||||||||| |
|
|
| T |
5472907 |
catgcgcactggccaagcgttgtttcccctgagaatcaaacctggtattccccggatacgt |
5472967 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 490
Target Start/End: Complemental strand, 21429411 - 21429293
Alignment:
| Q |
373 |
ttcgcaccg-tttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatc |
471 |
Q |
| |
|
||||||||| ||||| ||| ||||| |||||| | ||| | || ||||| ||||| ||||||||||||| ||||||||||| ||| | ||||||| | |
|
|
| T |
21429411 |
ttcgcaccggtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactggctaaacgttgttccccctaaaaatcgaacc |
21429312 |
T |
 |
| Q |
472 |
tggtattcctcggatacgt |
490 |
Q |
| |
|
| |||||||||||||||| |
|
|
| T |
21429311 |
cgatattcctcggatacgt |
21429293 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 490
Target Start/End: Complemental strand, 29895900 - 29895779
Alignment:
| Q |
370 |
cctttcgcaccg-tttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcga |
468 |
Q |
| |
|
|||||||||||| ||||| | | ||||| |||||| | ||||| ||||| | ||||| |||||||||||||||| ||||||| |||| ||||||| |
|
|
| T |
29895900 |
cctttcgcaccggtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcga |
29895801 |
T |
 |
| Q |
469 |
atctggtattcctcggatacgt |
490 |
Q |
| |
|
| | |||||||| ||||||||| |
|
|
| T |
29895800 |
acccggtattccccggatacgt |
29895779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 1446878 - 1446818
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
|||||||||||||||| ||||||| |||| |||||||| | |||||||| ||||||||| |
|
|
| T |
1446878 |
catgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgt |
1446818 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 20128361 - 20128301
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
|||||||||||||||| | |||||| ||||||||||||| | ||||||| ||||||||| |
|
|
| T |
20128361 |
catgcgcactggccaagcattgttccccctgagaatcgaacccagtattccccggatacgt |
20128301 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 490
Target Start/End: Complemental strand, 38166139 - 38166019
Alignment:
| Q |
371 |
ctttcgcaccg-tttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaa |
469 |
Q |
| |
|
||||||||||| ||||| ||| ||||| ||||| | ||||| ||||||| ||||| |||||||||||||||| |||||||| |||| ||||| || |
|
|
| T |
38166139 |
ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgttccccctgggaatccaa |
38166040 |
T |
 |
| Q |
470 |
tctggtattcctcggatacgt |
490 |
Q |
| |
|
| ||||||| ||||||||| |
|
|
| T |
38166039 |
cccagtattccccggatacgt |
38166019 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 430 - 494
Target Start/End: Complemental strand, 12606481 - 12606417
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgttctt |
494 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
12606481 |
catgcgcactggccaaacgttgttccccctggaaatcgaatctggtattccccggatacgttctt |
12606417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 490
Target Start/End: Complemental strand, 3601195 - 3601075
Alignment:
| Q |
371 |
ctttcgcaccg-tttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaa |
469 |
Q |
| |
|
||||||||||| ||||| ||| ||||| |||||| | ||||| ||||||| ||| | |||||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
3601195 |
ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcactggccaagcgttgttccccctgagaatcgaa |
3601096 |
T |
 |
| Q |
470 |
tctggtattcctcggatacgt |
490 |
Q |
| |
|
| |||||||| || |||||| |
|
|
| T |
3601095 |
accggtattccccgaatacgt |
3601075 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 21898699 - 21898639
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
|||||||||||||||| |||||||| ||||| |||||||| | |||||||| ||||||||| |
|
|
| T |
21898699 |
catgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacgt |
21898639 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 494
Target Start/End: Original strand, 10311521 - 10311592
Alignment:
| Q |
423 |
gtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgttctt |
494 |
Q |
| |
|
||||| ||||||||||||||||| |||||||| | |||| |||||| | |||||||| ||||||||||||| |
|
|
| T |
10311521 |
gtagagacatgcgcactggccaagcgttgttccccttgaggatcgaacccggtattccccggatacgttctt |
10311592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 430 - 483
Target Start/End: Original strand, 13584509 - 13584562
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcg |
483 |
Q |
| |
|
||||||||||||||||||||||||| || | |||||||| ||||||||||||| |
|
|
| T |
13584509 |
catgcgcactggccaaacgttgttcatcttaggaatcgaacctggtattcctcg |
13584562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 435 - 480
Target Start/End: Original strand, 34954683 - 34954728
Alignment:
| Q |
435 |
gcactggccaaacgttgttcgtcctgagaatcgaatctggtattcc |
480 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
34954683 |
gcactggccaaacgttgttccccctgagaatcgaacctggtattcc |
34954728 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 490
Target Start/End: Complemental strand, 19089609 - 19089489
Alignment:
| Q |
371 |
ctttcgcaccg-tttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaa |
469 |
Q |
| |
|
||||||||||| ||||| ||| ||||| ||| || | ||||| ||||||| ||||| ||||| |||||||||| ||||||| |||| ||||| || |
|
|
| T |
19089609 |
ctttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactggccaagtgttgttccccctgggaatcaaa |
19089510 |
T |
 |
| Q |
470 |
tctggtattcctcggatacgt |
490 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
19089509 |
cctggtattcctcggatacgt |
19089489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 483
Target Start/End: Complemental strand, 32048502 - 32048449
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcg |
483 |
Q |
| |
|
||||| ||||| ||||||||||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
32048502 |
catgcacactgaccaaacgttgttctccctgaaaatcgaatctgatattcctcg |
32048449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 490
Target Start/End: Original strand, 6606096 - 6606216
Alignment:
| Q |
371 |
ctttcgcaccg-tttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaa |
469 |
Q |
| |
|
||||||||||| ||||| ||| ||||| |||||| | ||||| ||||| | ||||| |||| |||||||||| ||||||| ||||||||||||| |
|
|
| T |
6606096 |
ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaagtgttgttccccctgagaatcgaa |
6606195 |
T |
 |
| Q |
470 |
tctggtattcctcggatacgt |
490 |
Q |
| |
|
| |||||||| ||||||||| |
|
|
| T |
6606196 |
cccggtattccccggatacgt |
6606216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 430 - 498
Target Start/End: Complemental strand, 23823999 - 23823931
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgttcttagaa |
498 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||| |||||| |||||||||||||||| ||||||| |
|
|
| T |
23823999 |
catgcgcactggccaaacgttgtttcccttgagaatcaaatctgatattcctcggatacgtccttagaa |
23823931 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 490
Target Start/End: Original strand, 42210272 - 42210381
Alignment:
| Q |
381 |
gtttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcc |
480 |
Q |
| |
|
|||||| ||| ||||||||||| || |||| ||||||| ||||| |||||||||||||||||||||||| ||| |||||||| | |||||||| |
|
|
| T |
42210272 |
gtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttttcactgggaatcgaagccggtattcc |
42210371 |
T |
 |
| Q |
481 |
tcggatacgt |
490 |
Q |
| |
|
|||||||||| |
|
|
| T |
42210372 |
tcggatacgt |
42210381 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 490
Target Start/End: Complemental strand, 1797526 - 1797450
Alignment:
| Q |
414 |
ggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| ||||||| |||| |||||||| | |||||||||||||||||| |
|
|
| T |
1797526 |
ggctcgtgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcgaacccggtattcctcggatacgt |
1797450 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 490
Target Start/End: Original strand, 17748392 - 17748501
Alignment:
| Q |
381 |
gtttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcc |
480 |
Q |
| |
|
|||||| ||| | ||| |||||| | ||||| |||||||| ||||| |||||||||||||||| |||||||| |||| |||||||| | |||||||| |
|
|
| T |
17748392 |
gtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattcc |
17748491 |
T |
 |
| Q |
481 |
tcggatacgt |
490 |
Q |
| |
|
|| |||||| |
|
|
| T |
17748492 |
ccgaatacgt |
17748501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 434 - 490
Target Start/End: Complemental strand, 16802169 - 16802113
Alignment:
| Q |
434 |
cgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
|||||||||||| |||||||| |||| ||||||||||| |||||||| ||| ||||| |
|
|
| T |
16802169 |
cgcactggccaatcgttgttcctcctaagaatcgaatccggtattccccgggtacgt |
16802113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 29151990 - 29151938
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctc |
482 |
Q |
| |
|
|||||||||||| |||||||||||| ||||| |||||||| | |||||||||| |
|
|
| T |
29151990 |
catgcgcactggtcaaacgttgttcttcctgggaatcgaacccggtattcctc |
29151938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 490
Target Start/End: Original strand, 43862031 - 43862091
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||||||| | |||||||| | ||||||| |
|
|
| T |
43862031 |
catgcgcactggccaaacgttgttccccctgggaatcgaacccggtattccccagatacgt |
43862091 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 430 - 490
Target Start/End: Original strand, 4228813 - 4228870
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
|||| |||||||||||||||||||| ||| ||||||| |||||||||||||||||||| |
|
|
| T |
4228813 |
catgtgcactggccaaacgttgttc---ctggaaatcgaacctggtattcctcggatacgt |
4228870 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 491
Target Start/End: Complemental strand, 365190 - 365129
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgtt |
491 |
Q |
| |
|
||||||||||| || |||||||| ||||| |||||||| | ||||||||||||||||||| |
|
|
| T |
365190 |
catgcgcactgattaagcgttgttcctcctgtgaatcgaacccggtattcctcggatacgtt |
365129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 495
Target Start/End: Complemental strand, 46414725 - 46414660
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgttctta |
495 |
Q |
| |
|
|||||||| ||||||| |||| ||| |||||||||||||| ||||||||| ||| ||||| |||| |
|
|
| T |
46414725 |
catgcgcattggccaagcgttattcatcctgagaatcgaacttggtattccacgggtacgtcctta |
46414660 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 490
Target Start/End: Original strand, 10047875 - 10047995
Alignment:
| Q |
371 |
ctttcgcaccg-tttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaa |
469 |
Q |
| |
|
||||||||||| ||||| ||| ||||| |||||| | |||||| |||| | ||||| | |||||||||||||| ||||||| |||| |||||||| |
|
|
| T |
10047875 |
ctttcgcaccggtttccgacccaccaatggtggacgactaattctgctcatgcgtagaggcctgcgcactggccaagtgttgttccccctgggaatcgaa |
10047974 |
T |
 |
| Q |
470 |
tctggtattcctcggatacgt |
490 |
Q |
| |
|
| |||||||| ||||||||| |
|
|
| T |
10047975 |
cccggtattccccggatacgt |
10047995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 480
Target Start/End: Complemental strand, 22974055 - 22973967
Alignment:
| Q |
392 |
accaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcc |
480 |
Q |
| |
|
||||| |||||| | ||||| |||||| | ||||| ||||| |||||||||| |||||||| ||||||||||||| | |||||||| |
|
|
| T |
22974055 |
accaaaggtggacgactaatctggctcatgcgtagacgcatgcacactggccaagcgttgttccccctgagaatcgaacccggtattcc |
22973967 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 490
Target Start/End: Complemental strand, 48804793 - 48804673
Alignment:
| Q |
371 |
ctttcgcaccg-tttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaa |
469 |
Q |
| |
|
||||||||||| ||||| ||| ||||| |||||| | ||||| ||||| | ||||| |||||||||||||||| ||||||| | || |||||||| |
|
|
| T |
48804793 |
ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccttgggaatcgaa |
48804694 |
T |
 |
| Q |
470 |
tctggtattcctcggatacgt |
490 |
Q |
| |
|
| |||||||| ||||||||| |
|
|
| T |
48804693 |
cccggtattccccggatacgt |
48804673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 18)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 381 - 499
Target Start/End: Complemental strand, 11069974 - 11069856
Alignment:
| Q |
381 |
gtttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcc |
480 |
Q |
| |
|
|||||| ||| |||||||||||| | |||||| |||||| ||||| |||||||||||||||||||||||| ||| |||||||| |||||||||| |
|
|
| T |
11069974 |
gtttccgacccaccaacggtggacgactaattcagctcgtgcgtagaggtatgcgcactggccaaacgttgttccccctcggaatcgaacctggtattcc |
11069875 |
T |
 |
| Q |
481 |
tcggatacgttcttagaat |
499 |
Q |
| |
|
||| ||||| ||| |||| |
|
|
| T |
11069874 |
ccgggtacgtccttggaat |
11069856 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 37560220 - 37560160
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
||||||||||| ||||||||||||| | ||||||||||| |||||||||||||| ||||| |
|
|
| T |
37560220 |
catgcgcactgaccaaacgttgttccccttgagaatcgaacctggtattcctcgggtacgt |
37560160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 38962810 - 38962750
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
|||||||||||||||| |||||||| |||||| ||||||| | |||||||| ||||||||| |
|
|
| T |
38962810 |
catgcgcactggccaagcgttgttcctcctgaaaatcgaacccggtattccccggatacgt |
38962750 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 434 - 488
Target Start/End: Original strand, 14853430 - 14853484
Alignment:
| Q |
434 |
cgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatac |
488 |
Q |
| |
|
||||||||||||| ||||||| ||||| |||||||||||||||||| ||||||| |
|
|
| T |
14853430 |
cgcactggccaaaagttgttccccctgaaaatcgaatctggtattccccggatac |
14853484 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 430 - 499
Target Start/End: Original strand, 6358210 - 6358279
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgttcttagaat |
499 |
Q |
| |
|
|||||||||||||||| ||||||| |||| |||||||||||||||||| ||||||||| ||| |||| |
|
|
| T |
6358210 |
catgcgcactggccaagtgttgttccccctggaaatcgaatctggtattccccggatacgtcctttgaat |
6358279 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 7747321 - 7747261
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
||||| ||||||||||||||||||| |||| |||||||| | |||||||| ||||||||| |
|
|
| T |
7747321 |
catgcacactggccaaacgttgttcctcctaggaatcgaacccggtattccccggatacgt |
7747261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 478
Target Start/End: Original strand, 10026675 - 10026723
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtatt |
478 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| | |||||| |
|
|
| T |
10026675 |
catgcgcactggccaaacgttgttccccctgagaatcgaacccggtatt |
10026723 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 41220682 - 41220622
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
|||||||||||||||| |||||||| ||||| |||||||| | |||||||| ||| ||||| |
|
|
| T |
41220682 |
catgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgggtacgt |
41220622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 490
Target Start/End: Original strand, 42770710 - 42770770
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||| ||| | |||||| ||||||||||| |
|
|
| T |
42770710 |
catgcgcactggccaagcgttgttccccctgagaattgaacccggtatttctcggatacgt |
42770770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 490
Target Start/End: Original strand, 19976859 - 19976926
Alignment:
| Q |
423 |
gtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
||||| |||||||||||| ||||||||| ||| ||||| ||||||| | |||||||| ||||||||| |
|
|
| T |
19976859 |
gtagagacatgcgcactgaccaaacgttattccccctgaaaatcgaacccggtattccccggatacgt |
19976926 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 430 - 480
Target Start/End: Original strand, 18649085 - 18649135
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcc |
480 |
Q |
| |
|
||||||||||| ||||| |||||| |||||||||||||||| |||||||| |
|
|
| T |
18649085 |
catgcgcactgcccaaatattgttcctcctgagaatcgaatccggtattcc |
18649135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 392 - 490
Target Start/End: Original strand, 39806906 - 39807004
Alignment:
| Q |
392 |
accaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
||||| |||||||| ||||| | ||||| ||||| |||||||||||||||||||||||| || || |||||||| | |||||||| ||| ||||| |
|
|
| T |
39806906 |
accaaaggtggatgactaatccgactcgtgtgtagaggcatgcgcactggccaaacgttgtttctcttgggaatcgaacccggtattccccgggtacgt |
39807004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 490
Target Start/End: Complemental strand, 331597 - 331488
Alignment:
| Q |
381 |
gtttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcc |
480 |
Q |
| |
|
|||||||||| ||||| ||||| | ||||| ||||| | |||||| |||||||||||||||| ||||||| |||| |||||||| | |||||||| |
|
|
| T |
331597 |
gtttccaacccaccaaaggtgggcgactaatccggctcatgcgtagaagcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattcc |
331498 |
T |
 |
| Q |
481 |
tcggatacgt |
490 |
Q |
| |
|
||| ||||| |
|
|
| T |
331497 |
ccgggtacgt |
331488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 499
Target Start/End: Original strand, 25540403 - 25540532
Alignment:
| Q |
371 |
ctttcgcaccg-tttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaa |
469 |
Q |
| |
|
||||||||||| ||||| ||| ||||| |||||| | ||||| ||||||| ||||| |||||||||||||||| |||||||| ||| |||||||| |
|
|
| T |
25540403 |
ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctaggaatcgaa |
25540502 |
T |
 |
| Q |
470 |
tctggtattcctcggatacgttcttagaat |
499 |
Q |
| |
|
| ||||||| | ||||||| ||| |||| |
|
|
| T |
25540503 |
cccagtattccccagatacgtccttggaat |
25540532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 483
Target Start/End: Original strand, 39201567 - 39201620
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcg |
483 |
Q |
| |
|
||||| |||||||||||| |||||| |||||||||||||| ||||||||||| |
|
|
| T |
39201567 |
catgcacactggccaaacattgttccccctgagaatcgaattcggtattcctcg |
39201620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 10823107 - 10823047
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
|||||||||||||||| |||||||| ||||| ||||| || | |||||||| ||| ||||| |
|
|
| T |
10823107 |
catgcgcactggccaagcgttgttcctcctgggaatcaaacccggtattccccgggtacgt |
10823047 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 16034984 - 16034924
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
||||| |||||| ||| |||||||| ||||| ||||||| | |||||||||||||||||| |
|
|
| T |
16034984 |
catgcacactggtcaagcgttgttccgcctgaaaatcgaacccggtattcctcggatacgt |
16034924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 41187896 - 41187836
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
|||||||||||| ||| ||||||| |||| ||||| |||| |||||||||||||||||| |
|
|
| T |
41187896 |
catgcgcactggtcaagcgttgtttttcctaagaattgaattcggtattcctcggatacgt |
41187836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 490
Target Start/End: Complemental strand, 29136009 - 29135900
Alignment:
| Q |
381 |
gtttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcc |
480 |
Q |
| |
|
|||||||||| ||||| |||||| | ||||| ||||| | ||||| |||||||||||||||| ||||||| |||| |||||||||| |||||||| |
|
|
| T |
29136009 |
gtttccaacccaccaatggtggaagactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaatccggtattcc |
29135910 |
T |
 |
| Q |
481 |
tcggatacgt |
490 |
Q |
| |
|
||||||||| |
|
|
| T |
29135909 |
ccggatacgt |
29135900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 434 - 498
Target Start/End: Complemental strand, 41219635 - 41219572
Alignment:
| Q |
434 |
cgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgttcttagaa |
498 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| ||||||||| || |||||| ||||||| |
|
|
| T |
41219635 |
cgcactggccaaacgttgttcctcctgagaatcgaacttggtattcc-cgtatacgtccttagaa |
41219572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 490
Target Start/End: Complemental strand, 3755624 - 3755557
Alignment:
| Q |
423 |
gtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
||||| ||||||||||||| |||||||||||| ||||| |||||||| |||||||| ||||||||| |
|
|
| T |
3755624 |
gtagagacatgcgcactggtcaaacgttgttcctcctgggaatcgaagtcggtattccccggatacgt |
3755557 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 480
Target Start/End: Complemental strand, 928685 - 928597
Alignment:
| Q |
392 |
accaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcc |
480 |
Q |
| |
|
||||| |||||||| ||||| ||||||| |||| |||||||||||| ||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
928685 |
accaaaggtggatgactaatccggctcgtgcgtagcggcatgcgcactggtcaagtgttgttccccctgagaatcgaatctggtattcc |
928597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 490
Target Start/End: Original strand, 51683014 - 51683074
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
|||||||||||| ||| |||||||| |||| |||||||| |||||||||| ||||||||| |
|
|
| T |
51683014 |
catgcgcactggtcaagcgttgttccccctgggaatcgaacctggtattccccggatacgt |
51683074 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 498
Target Start/End: Complemental strand, 10040652 - 10040536
Alignment:
| Q |
381 |
gtttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcc |
480 |
Q |
| |
|
|||||||||| ||||| |||||| | | | | ||||||| ||||| |||||||||||||||| |||||||| ||||||||||||| | | |||||| |
|
|
| T |
10040652 |
gtttccaacccaccaaaggtggacgaccattccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc-ccctgagaatcgaacccgatattcc |
10040554 |
T |
 |
| Q |
481 |
tcggatacgttcttagaa |
498 |
Q |
| |
|
||| ||||| ||||||| |
|
|
| T |
10040553 |
ccgggtacgtccttagaa |
10040536 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 479
Target Start/End: Original strand, 35923683 - 35923732
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattc |
479 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||| ||||||||| |
|
|
| T |
35923683 |
catgcgcactggccaaacgttgttccccctatgaatcgaacctggtattc |
35923732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 6462459 - 6462399
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
|||||||||||||||| |||||||| |||| |||||||| | |||||||| | ||||||| |
|
|
| T |
6462459 |
catgcgcactggccaagcgttgttctccctgtgaatcgaacccggtattccccagatacgt |
6462399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 498
Target Start/End: Complemental strand, 49082871 - 49082803
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgttcttagaa |
498 |
Q |
| |
|
||||||||||||| || |||||||| |||| |||||||| |||||||| ||||||||| ||||||| |
|
|
| T |
49082871 |
catgcgcactggctaagcgttgttctccctgggaatcgaactcggtattccccggatacgtccttagaa |
49082803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 6100523 - 6100463
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
|||||||||||||||| |||||||| ||||| |||||||| | |||||||| ||||||||| |
|
|
| T |
6100523 |
catgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacgt |
6100463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 487
Target Start/End: Complemental strand, 18374061 - 18374004
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggata |
487 |
Q |
| |
|
|||||||||||| ||| |||||||| ||||||||||||| |||||||| | |||||| |
|
|
| T |
18374061 |
catgcgcactggtcaagcgttgttctccctgagaatcgaacctggtatttcccggata |
18374004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 437 - 469
Target Start/End: Original strand, 68164 - 68196
Alignment:
| Q |
437 |
actggccaaacgttgttcgtcctgagaatcgaa |
469 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |
|
|
| T |
68164 |
actggccaaacgttgttcctcctgagaatcgaa |
68196 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 10927657 - 10927597
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
|||||||||||||||| |||||||| |||| |||||||| | |||||||| ||| ||||| |
|
|
| T |
10927657 |
catgcgcactggccaagcgttgttcctcctaggaatcgaacccggtattccccgggtacgt |
10927597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 36; Significance: 0.00000000005; HSPs: 15)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 490
Target Start/End: Original strand, 45726486 - 45726553
Alignment:
| Q |
423 |
gtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
||||| |||| ||||||||||||| ||| ||| |||||||||||||| | |||||||||||| ||||| |
|
|
| T |
45726486 |
gtagagacatacgcactggccaaatgttattcctcctgagaatcgaaccaggtattcctcgggtacgt |
45726553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 492
Target Start/End: Complemental strand, 44969712 - 44969651
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgttc |
492 |
Q |
| |
|
||||| |||||||||| |||||||| |||||||||||||| |||||||| ||||| ||||||| |
|
|
| T |
44969712 |
catgcacactggccaagcgttgttc-tcctgagaatcgaacctggtatttctcgggtacgttc |
44969651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 430 - 480
Target Start/End: Original strand, 45361942 - 45361992
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcc |
480 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||||| | |||||||| |
|
|
| T |
45361942 |
catgcgcactggccaagcgttgttcctcctgagaatcgaacccggtattcc |
45361992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 5855570 - 5855510
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
|||||||||||||||| |||||||| ||||| |||||||| | |||||||| || |||||| |
|
|
| T |
5855570 |
catgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgt |
5855510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 490
Target Start/End: Complemental strand, 16263593 - 16263533
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
|||||||||||||||| |||||||| ||||| ||||||| |||||||||| | ||||||| |
|
|
| T |
16263593 |
catgcgcactggccaagcgttgttcctcctggaaatcgaacctggtattccccagatacgt |
16263533 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 484
Target Start/End: Complemental strand, 31734358 - 31734283
Alignment:
| Q |
408 |
taatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcgg |
484 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||| ||||||| ||| ||||||||||| ||||||||||| |
|
|
| T |
31734358 |
taatttggctcgtacgtagaggcatgcgcactggccaatcgttgtttcccct-agaatcgaatccagtattcctcgg |
31734283 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 490
Target Start/End: Original strand, 12744576 - 12744643
Alignment:
| Q |
423 |
gtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
||||| ||||||||||| | ||| |||||||| ||||| ||||||||||| |||||||| ||||||| |
|
|
| T |
12744576 |
gtagagacatgcgcactagtcaagcgttgttccccctgaaaatcgaatctgatattcctcagatacgt |
12744643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 490
Target Start/End: Original strand, 12755566 - 12755633
Alignment:
| Q |
423 |
gtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
||||| ||||||||||| | ||| |||||||| ||||| ||||||||||| |||||||| ||||||| |
|
|
| T |
12755566 |
gtagagacatgcgcactagtcaagcgttgttccccctgaaaatcgaatctgatattcctcagatacgt |
12755633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 499
Target Start/End: Complemental strand, 13265986 - 13265917
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgttcttagaat |
499 |
Q |
| |
|
||||||||||||| | |||||||| ||| |||||||| | |||||||||||||||||| |||||||| |
|
|
| T |
13265986 |
catgcgcactggctagacgttgttttccctaggaatcgaaccaggtattcctcggatacgtccttagaat |
13265917 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 430 - 499
Target Start/End: Original strand, 34334355 - 34334424
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgttcttagaat |
499 |
Q |
| |
|
|||||||||||||||| ||||||| |||| |||||||| | |||||||| ||||||||| ||| |||| |
|
|
| T |
34334355 |
catgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaat |
34334424 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 453
Target Start/End: Complemental strand, 2567373 - 2567301
Alignment:
| Q |
381 |
gtttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgtt |
453 |
Q |
| |
|
|||||| ||| ||||| | |||| ||||||| || ||||| |||||| |||||||||||||||| ||||||| |
|
|
| T |
2567373 |
gtttccgacccaccaaagatggacggctaatctgactcgtgagtagaggcatgcgcactggccaagcgttgtt |
2567301 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 454
Target Start/End: Complemental strand, 8764099 - 8764015
Alignment:
| Q |
371 |
ctttcgcaccg-tttccaaccaaccaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttc |
454 |
Q |
| |
|
||||||||||| ||||| ||| |||||||||||| | ||||| ||||||| ||||| |||||||||||||||| ||||||| |
|
|
| T |
8764099 |
ctttcgcaccggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttc |
8764015 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 478
Target Start/End: Original strand, 33498899 - 33498947
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtatt |
478 |
Q |
| |
|
|||||||||||||||| ||||| || |||||||||||||| | |||||| |
|
|
| T |
33498899 |
catgcgcactggccaagcgttgctcctcctgagaatcgaacccggtatt |
33498947 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 498
Target Start/End: Original strand, 41663916 - 41663984
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgttcttagaa |
498 |
Q |
| |
|
||||||||||| |||| ||||||| |||| |||||||| | |||||||| ||||||||| ||||||| |
|
|
| T |
41663916 |
catgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttagaa |
41663984 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 498
Target Start/End: Complemental strand, 49078162 - 49078094
Alignment:
| Q |
430 |
catgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgttcttagaa |
498 |
Q |
| |
|
|||||||||||||||| |||||| |||| |||||||| | |||||||| ||||||||| ||||||| |
|
|
| T |
49078162 |
catgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtccttagaa |
49078094 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0170 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0170
Description:
Target: scaffold0170; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 488
Target Start/End: Complemental strand, 9933 - 9837
Alignment:
| Q |
392 |
accaacggtggatggctaatttggctcgtaagtagaaacatgcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatac |
488 |
Q |
| |
|
||||| |||||| | ||||| ||||||| ||||| |||||||||||||||| |||||||| |||| ||||||||| |||||||||| ||||| |
|
|
| T |
9933 |
accaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaatccggtattcctcagatac |
9837 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 490
Target Start/End: Original strand, 8763 - 8820
Alignment:
| Q |
433 |
gcgcactggccaaacgttgttcgtcctgagaatcgaatctggtattcctcggatacgt |
490 |
Q |
| |
|
||||||||||||| |||||||| |||| |||||||| | |||||||||| ||||||| |
|
|
| T |
8763 |
gcgcactggccaagcgttgttccccctgggaatcgaacccggtattcctctgatacgt |
8820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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