View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1255_low_33 (Length: 250)

Name: NF1255_low_33
Description: NF1255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1255_low_33
NF1255_low_33
[»] scaffold0352 (2 HSPs)
scaffold0352 (5-141)||(17626-17762)
scaffold0352 (138-167)||(17879-17908)
[»] chr7 (61 HSPs)
chr7 (5-141)||(9509556-9509692)
chr7 (5-140)||(12699200-12699335)
chr7 (6-141)||(38227848-38227982)
chr7 (5-137)||(3563982-3564114)
chr7 (5-141)||(39267264-39267399)
chr7 (5-141)||(9751168-9751303)
chr7 (5-121)||(16385876-16385992)
chr7 (5-118)||(2831924-2832037)
chr7 (20-141)||(17061593-17061714)
chr7 (5-141)||(18302546-18302681)
chr7 (5-121)||(27847462-27847578)
chr7 (5-121)||(40443764-40443880)
chr7 (5-119)||(28504919-28505033)
chr7 (5-121)||(15754505-15754621)
chr7 (5-121)||(26212372-26212488)
chr7 (28-122)||(12756358-12756452)
chr7 (5-119)||(34201172-34201286)
chr7 (5-137)||(15143654-15143787)
chr7 (28-141)||(44116872-44116984)
chr7 (18-137)||(44014545-44014664)
chr7 (5-97)||(11995676-11995768)
chr7 (18-137)||(810760-810879)
chr7 (18-121)||(68133-68236)
chr7 (18-97)||(18006052-18006131)
chr7 (19-121)||(16324393-16324495)
chr7 (19-97)||(47832219-47832297)
chr7 (5-72)||(19649103-19649170)
chr7 (19-121)||(16219348-16219450)
chr7 (4-118)||(44407988-44408102)
chr7 (41-118)||(22073306-22073383)
chr7 (29-121)||(9389337-9389429)
chr7 (5-121)||(21064780-21064896)
chr7 (5-77)||(24054897-24054969)
chr7 (28-91)||(2760542-2760605)
chr7 (28-91)||(3272202-3272265)
chr7 (58-121)||(12255462-12255525)
chr7 (4-118)||(14953560-14953674)
chr7 (4-118)||(14959526-14959640)
chr7 (4-118)||(26420340-26420454)
chr7 (58-119)||(2279789-2279850)
chr7 (19-72)||(18154469-18154522)
chr7 (29-69)||(12187450-12187490)
chr7 (29-69)||(17137706-17137746)
chr7 (41-92)||(2529631-2529682)
chr7 (29-72)||(10508725-10508768)
chr7 (4-118)||(14148932-14149046)
chr7 (35-69)||(15211865-15211899)
chr7 (35-117)||(20702651-20702733)
chr7 (35-117)||(32768038-32768120)
chr7 (138-167)||(9509389-9509418)
chr7 (61-118)||(11547953-11548010)
chr7 (61-118)||(11554549-11554606)
chr7 (29-90)||(11880668-11880729)
chr7 (28-69)||(14430315-14430356)
chr7 (41-106)||(14655082-14655147)
chr7 (28-65)||(42205530-42205567)
chr7 (29-65)||(8917842-8917878)
chr7 (29-69)||(9703703-9703743)
chr7 (29-65)||(13462177-13462213)
chr7 (29-65)||(15581108-15581144)
chr7 (29-65)||(15604926-15604962)
[»] chr8 (60 HSPs)
chr8 (5-141)||(18878855-18878991)
chr8 (5-142)||(20536574-20536711)
chr8 (5-141)||(18818028-18818164)
chr8 (5-141)||(23406748-23406884)
chr8 (5-137)||(22627106-22627238)
chr8 (6-139)||(28648663-28648795)
chr8 (28-141)||(7373116-7373229)
chr8 (5-121)||(31971631-31971747)
chr8 (5-141)||(41598551-41598687)
chr8 (6-141)||(6759624-6759759)
chr8 (5-119)||(5865895-5866009)
chr8 (5-118)||(16199276-16199389)
chr8 (6-119)||(23648942-23649055)
chr8 (5-121)||(45130649-45130765)
chr8 (5-118)||(21491382-21491495)
chr8 (5-121)||(21255606-21255722)
chr8 (5-121)||(21918628-21918744)
chr8 (5-141)||(21923546-21923681)
chr8 (5-119)||(16091959-16092073)
chr8 (5-119)||(17141302-17141416)
chr8 (5-121)||(21249768-21249884)
chr8 (5-121)||(19801045-19801161)
chr8 (29-121)||(25362793-25362885)
chr8 (5-141)||(22875432-22875568)
chr8 (18-137)||(21674076-21674195)
chr8 (18-137)||(26355329-26355448)
chr8 (5-72)||(21389071-21389138)
chr8 (19-97)||(38854883-38854961)
chr8 (45-121)||(39834219-39834295)
chr8 (19-97)||(6520779-6520857)
chr8 (38-119)||(20499049-20499130)
chr8 (28-121)||(23760481-23760574)
chr8 (4-118)||(20527812-20527926)
chr8 (28-69)||(15602659-15602700)
chr8 (28-69)||(15611111-15611152)
chr8 (28-69)||(16409897-16409938)
chr8 (28-69)||(16860979-16861020)
chr8 (20-69)||(20856059-20856108)
chr8 (35-72)||(21395631-21395668)
chr8 (35-116)||(21414875-21414956)
chr8 (35-72)||(21790124-21790161)
chr8 (29-69)||(377714-377754)
chr8 (29-69)||(20465682-20465722)
chr8 (35-106)||(19111601-19111672)
chr8 (35-106)||(19117892-19117963)
chr8 (41-91)||(13507663-13507713)
chr8 (41-91)||(13597195-13597245)
chr8 (28-118)||(16411911-16412001)
chr8 (35-69)||(17926356-17926390)
chr8 (59-117)||(18865695-18865753)
chr8 (29-91)||(22010322-22010384)
chr8 (35-117)||(29123449-29123531)
chr8 (138-167)||(7372970-7372999)
chr8 (138-167)||(18818301-18818330)
chr8 (29-90)||(19899510-19899571)
chr8 (138-167)||(20536408-20536437)
chr8 (138-167)||(22626935-22626964)
chr8 (29-65)||(18619894-18619930)
chr8 (29-65)||(22028973-22029009)
chr8 (29-69)||(30642934-30642974)
[»] chr6 (56 HSPs)
chr6 (5-141)||(22779845-22779981)
chr6 (5-141)||(17287414-17287550)
chr6 (5-141)||(19303159-19303294)
chr6 (8-121)||(20637915-20638028)
chr6 (5-141)||(29808501-29808638)
chr6 (5-121)||(1561690-1561806)
chr6 (5-141)||(18409445-18409580)
chr6 (5-141)||(28496091-28496226)
chr6 (5-121)||(21939770-21939886)
chr6 (26-137)||(29060911-29061022)
chr6 (20-121)||(18821463-18821564)
chr6 (5-134)||(20594147-20594276)
chr6 (6-121)||(16920263-16920378)
chr6 (17-121)||(20360601-20360705)
chr6 (11-139)||(25611347-25611474)
chr6 (20-122)||(18457100-18457202)
chr6 (6-138)||(15894049-15894180)
chr6 (5-121)||(22334500-22334616)
chr6 (18-137)||(19652566-19652685)
chr6 (5-139)||(25603003-25603136)
chr6 (5-137)||(4667831-4667963)
chr6 (5-137)||(4674678-4674810)
chr6 (5-121)||(22831878-22831994)
chr6 (5-137)||(4185441-4185573)
chr6 (5-137)||(4189327-4189459)
chr6 (19-137)||(27332916-27333034)
chr6 (19-137)||(27393656-27393774)
chr6 (5-126)||(31155016-31155137)
chr6 (5-121)||(11185878-11185994)
chr6 (41-121)||(23019794-23019874)
chr6 (15-134)||(25628983-25629102)
chr6 (5-77)||(22439230-22439302)
chr6 (5-65)||(27415572-27415632)
chr6 (2-118)||(31164473-31164589)
chr6 (5-72)||(19863413-19863480)
chr6 (41-97)||(22080391-22080447)
chr6 (5-77)||(22432680-22432752)
chr6 (4-118)||(22331803-22331917)
chr6 (20-69)||(18180925-18180974)
chr6 (29-69)||(21834533-21834573)
chr6 (5-77)||(25641802-25641874)
chr6 (59-117)||(1538628-1538686)
chr6 (59-117)||(1544727-1544785)
chr6 (19-121)||(25956253-25956355)
chr6 (60-117)||(16372223-16372280)
chr6 (28-69)||(16523045-16523086)
chr6 (41-118)||(20109605-20109682)
chr6 (41-106)||(27327722-27327787)
chr6 (41-106)||(27388462-27388527)
chr6 (29-65)||(1645121-1645157)
chr6 (42-106)||(14059283-14059347)
chr6 (4-104)||(14099004-14099104)
chr6 (29-69)||(21739665-21739705)
chr6 (29-69)||(22429684-22429724)
chr6 (19-119)||(25644711-25644811)
chr6 (37-65)||(27567271-27567299)
[»] chr1 (43 HSPs)
chr1 (5-141)||(22354190-22354326)
chr1 (5-137)||(22532640-22532772)
chr1 (5-137)||(34510151-34510283)
chr1 (5-121)||(22355803-22355919)
chr1 (5-121)||(22357489-22357605)
chr1 (5-121)||(27250358-27250474)
chr1 (5-141)||(50209832-50209966)
chr1 (6-141)||(433374-433509)
chr1 (5-119)||(20918990-20919104)
chr1 (5-121)||(20846848-20846964)
chr1 (5-121)||(38801020-38801136)
chr1 (5-139)||(20135557-20135690)
chr1 (5-121)||(21027056-21027172)
chr1 (6-94)||(21301157-21301245)
chr1 (18-137)||(33681380-33681499)
chr1 (18-137)||(52927612-52927731)
chr1 (5-119)||(20091092-20091206)
chr1 (5-119)||(21162117-21162231)
chr1 (28-137)||(20248648-20248757)
chr1 (29-137)||(21754406-21754514)
chr1 (19-117)||(22921499-22921597)
chr1 (28-137)||(22238000-22238109)
chr1 (19-121)||(43697747-43697849)
chr1 (5-72)||(22468315-22468382)
chr1 (29-91)||(18181764-18181826)
chr1 (4-118)||(21438157-21438271)
chr1 (4-118)||(23763574-23763688)
chr1 (45-119)||(28194106-28194180)
chr1 (58-120)||(35981357-35981419)
chr1 (19-72)||(21714983-21715036)
chr1 (28-69)||(22432425-22432466)
chr1 (5-69)||(8761252-8761316)
chr1 (28-68)||(21023075-21023115)
chr1 (28-67)||(3472568-3472607)
chr1 (59-118)||(20524899-20524958)
chr1 (59-117)||(19063884-19063942)
chr1 (59-117)||(19111774-19111832)
chr1 (20-65)||(17678232-17678277)
chr1 (138-167)||(22354464-22354493)
chr1 (29-69)||(22831021-22831061)
chr1 (29-65)||(23818953-23818989)
chr1 (29-69)||(42864854-42864894)
chr1 (29-65)||(45489397-45489433)
[»] scaffold0011 (2 HSPs)
scaffold0011 (5-141)||(52279-52415)
scaffold0011 (5-118)||(167608-167721)
[»] chr3 (78 HSPs)
chr3 (5-141)||(26687254-26687390)
chr3 (6-141)||(17499706-17499841)
chr3 (5-137)||(40213339-40213471)
chr3 (6-141)||(17488224-17488359)
chr3 (5-141)||(11424381-11424516)
chr3 (5-141)||(12340120-12340255)
chr3 (5-141)||(18438902-18439037)
chr3 (5-141)||(17247904-17248040)
chr3 (5-121)||(20698065-20698181)
chr3 (5-138)||(14179693-14179825)
chr3 (5-114)||(43842572-43842681)
chr3 (5-141)||(14665973-14666108)
chr3 (5-141)||(14669128-14669263)
chr3 (5-141)||(14735486-14735621)
chr3 (5-141)||(25476003-25476139)
chr3 (9-122)||(53070321-53070434)
chr3 (5-117)||(14973245-14973357)
chr3 (8-139)||(14572958-14573088)
chr3 (7-141)||(12851984-12852117)
chr3 (5-139)||(14576451-14576584)
chr3 (5-121)||(30030215-30030331)
chr3 (5-138)||(13209946-13210077)
chr3 (29-141)||(4588457-4588568)
chr3 (5-121)||(12399582-12399698)
chr3 (57-141)||(13442641-13442725)
chr3 (5-141)||(23082979-23083114)
chr3 (18-137)||(49389275-49389394)
chr3 (29-138)||(12933952-12934061)
chr3 (35-138)||(9513280-9513383)
chr3 (35-138)||(9521255-9521358)
chr3 (6-121)||(16809776-16809887)
chr3 (9-103)||(17247142-17247236)
chr3 (18-118)||(32308058-32308158)
chr3 (18-137)||(16097701-16097820)
chr3 (29-138)||(49667726-49667834)
chr3 (18-119)||(1644314-1644415)
chr3 (28-120)||(16104168-16104260)
chr3 (28-97)||(12171758-12171827)
chr3 (41-116)||(324627-324702)
chr3 (5-72)||(15877447-15877514)
chr3 (19-117)||(14234881-14234979)
chr3 (19-121)||(15471311-15471413)
chr3 (41-117)||(2050855-2050931)
chr3 (45-121)||(1465067-1465143)
chr3 (4-118)||(839609-839723)
chr3 (41-119)||(22109929-22110007)
chr3 (4-118)||(24188140-24188254)
chr3 (4-118)||(55149341-55149455)
chr3 (28-69)||(3402608-3402649)
chr3 (28-69)||(12496690-12496731)
chr3 (28-69)||(15060727-15060768)
chr3 (28-69)||(17674217-17674258)
chr3 (28-69)||(18383559-18383600)
chr3 (29-69)||(3389600-3389640)
chr3 (29-69)||(11298172-11298212)
chr3 (29-69)||(14878148-14878188)
chr3 (29-69)||(26190652-26190692)
chr3 (28-67)||(323026-323065)
chr3 (41-92)||(14501615-14501666)
chr3 (41-116)||(23275133-23275208)
chr3 (58-121)||(52523398-52523461)
chr3 (35-69)||(15051951-15051985)
chr3 (35-117)||(23704428-23704510)
chr3 (35-117)||(23722884-23722966)
chr3 (35-117)||(23741340-23741422)
chr3 (35-117)||(41201457-41201539)
chr3 (28-69)||(19725554-19725595)
chr3 (138-167)||(26687087-26687116)
chr3 (41-106)||(53380017-53380082)
chr3 (41-106)||(53386669-53386734)
chr3 (29-69)||(321657-321697)
chr3 (41-121)||(605945-606025)
chr3 (29-69)||(856571-856611)
chr3 (4-104)||(4291149-4291249)
chr3 (29-69)||(12173221-12173261)
chr3 (29-69)||(17524817-17524857)
chr3 (29-69)||(23077121-23077161)
chr3 (8-52)||(23408884-23408928)
[»] scaffold0016 (3 HSPs)
scaffold0016 (6-141)||(2218-2353)
scaffold0016 (29-141)||(207161-207272)
scaffold0016 (138-167)||(2051-2080)
[»] chr5 (50 HSPs)
chr5 (6-141)||(23390115-23390250)
chr5 (5-137)||(1096838-1096970)
chr5 (5-141)||(24529588-24529724)
chr5 (5-141)||(21985765-21985900)
chr5 (5-141)||(24493936-24494071)
chr5 (5-139)||(9078322-9078455)
chr5 (6-141)||(13095862-13095996)
chr5 (6-127)||(21871190-21871311)
chr5 (6-127)||(21875470-21875591)
chr5 (5-121)||(22075395-22075511)
chr5 (5-141)||(22119811-22119946)
chr5 (5-141)||(25421900-25422035)
chr5 (5-121)||(8286471-8286587)
chr5 (5-141)||(24766955-24767090)
chr5 (5-141)||(25431762-25431897)
chr5 (6-141)||(13025678-13025812)
chr5 (20-141)||(11580878-11580999)
chr5 (20-141)||(36154461-36154582)
chr5 (5-138)||(19660455-19660587)
chr5 (29-121)||(21292623-21292715)
chr5 (18-137)||(21565915-21566034)
chr5 (5-119)||(22107002-22107116)
chr5 (28-137)||(22959174-22959283)
chr5 (18-137)||(19669271-19669390)
chr5 (19-121)||(21329127-21329229)
chr5 (28-121)||(21498658-21498751)
chr5 (5-65)||(20910430-20910490)
chr5 (28-69)||(20805983-20806024)
chr5 (58-121)||(22144437-22144500)
chr5 (4-118)||(21294892-21295006)
chr5 (6-72)||(37724337-37724403)
chr5 (4-117)||(15441583-15441696)
chr5 (28-69)||(17918804-17918845)
chr5 (28-69)||(21366308-21366349)
chr5 (49-121)||(5888837-5888909)
chr5 (29-69)||(22032752-22032792)
chr5 (4-116)||(22588459-22588571)
chr5 (29-69)||(31342539-31342579)
chr5 (29-72)||(23201802-23201845)
chr5 (62-117)||(41294121-41294176)
chr5 (35-117)||(17284430-17284512)
chr5 (4-118)||(24554896-24555010)
chr5 (59-117)||(25406789-25406847)
chr5 (60-118)||(25535351-25535409)
chr5 (60-117)||(23336973-23337030)
chr5 (138-167)||(23390388-23390417)
chr5 (35-72)||(23500994-23501031)
chr5 (29-69)||(18769647-18769687)
chr5 (45-121)||(21741201-21741277)
chr5 (29-69)||(21887260-21887300)
[»] scaffold0627 (1 HSPs)
scaffold0627 (5-141)||(272-407)
[»] scaffold0305 (1 HSPs)
scaffold0305 (5-141)||(20770-20906)
[»] scaffold0266 (1 HSPs)
scaffold0266 (5-141)||(18576-18712)
[»] scaffold0026 (5 HSPs)
scaffold0026 (5-141)||(40223-40359)
scaffold0026 (5-136)||(39549-39680)
scaffold0026 (71-141)||(26592-26662)
scaffold0026 (63-119)||(59179-59235)
scaffold0026 (138-167)||(26095-26124)
[»] chr2 (33 HSPs)
chr2 (5-141)||(23660389-23660525)
chr2 (5-141)||(27753942-27754078)
chr2 (6-141)||(22730852-22730987)
chr2 (5-141)||(298433-298568)
chr2 (6-141)||(22737799-22737934)
chr2 (5-121)||(23654028-23654144)
chr2 (6-141)||(22337483-22337617)
chr2 (5-121)||(20309481-20309597)
chr2 (6-121)||(23286237-23286352)
chr2 (8-141)||(23076808-23076940)
chr2 (20-141)||(32451562-32451683)
chr2 (5-112)||(28291920-28292027)
chr2 (5-121)||(37745-37861)
chr2 (38-119)||(23071614-23071695)
chr2 (29-118)||(22133859-22133948)
chr2 (19-121)||(25176229-25176331)
chr2 (54-134)||(28406353-28406433)
chr2 (5-72)||(23100849-23100916)
chr2 (4-118)||(24503473-24503587)
chr2 (29-90)||(24658055-24658116)
chr2 (28-69)||(25963359-25963400)
chr2 (59-117)||(12829434-12829492)
chr2 (35-77)||(22740609-22740651)
chr2 (35-77)||(22758364-22758406)
chr2 (35-69)||(24654998-24655032)
chr2 (28-69)||(21917958-21917999)
chr2 (138-167)||(22731126-22731155)
chr2 (138-167)||(22738072-22738101)
chr2 (28-69)||(22811576-22811617)
chr2 (28-69)||(37525100-37525141)
chr2 (29-69)||(22798769-22798809)
chr2 (29-65)||(27263667-27263703)
chr2 (29-69)||(45677798-45677838)
[»] scaffold0121 (2 HSPs)
scaffold0121 (8-141)||(8154-8286)
scaffold0121 (138-167)||(8425-8454)
[»] scaffold0876 (1 HSPs)
scaffold0876 (5-128)||(2703-2826)
[»] scaffold0175 (2 HSPs)
scaffold0175 (6-141)||(13459-13594)
scaffold0175 (5-119)||(34509-34623)
[»] scaffold0292 (2 HSPs)
scaffold0292 (5-141)||(3837-3973)
scaffold0292 (17-141)||(709-833)
[»] chr4 (59 HSPs)
chr4 (5-141)||(44053196-44053332)
chr4 (6-141)||(14039016-14039151)
chr4 (20-141)||(6190800-6190921)
chr4 (5-141)||(7799064-7799200)
chr4 (5-121)||(15552200-15552316)
chr4 (5-141)||(22636801-22636937)
chr4 (6-141)||(44928542-44928677)
chr4 (5-121)||(3097019-3097135)
chr4 (5-121)||(12903133-12903248)
chr4 (5-141)||(13812427-13812562)
chr4 (5-141)||(22633831-22633966)
chr4 (5-141)||(24029109-24029244)
chr4 (8-121)||(7089253-7089366)
chr4 (5-141)||(16239610-16239746)
chr4 (5-137)||(16377140-16377272)
chr4 (5-121)||(20156908-20157024)
chr4 (5-141)||(15091264-15091400)
chr4 (5-138)||(16597016-16597148)
chr4 (5-121)||(14052932-14053047)
chr4 (20-141)||(44102577-44102697)
chr4 (18-137)||(8846746-8846865)
chr4 (18-121)||(12774385-12774488)
chr4 (29-116)||(17047726-17047813)
chr4 (20-122)||(21814936-21815038)
chr4 (20-122)||(21818358-21818460)
chr4 (20-122)||(21815265-21815367)
chr4 (19-121)||(39705920-39706022)
chr4 (59-106)||(17046718-17046765)
chr4 (45-121)||(15099737-15099813)
chr4 (41-121)||(43198242-43198322)
chr4 (41-120)||(15868289-15868368)
chr4 (19-97)||(13844950-13845028)
chr4 (4-118)||(14679325-14679439)
chr4 (6-118)||(14685534-14685646)
chr4 (62-121)||(52242868-52242927)
chr4 (4-118)||(23838796-23838910)
chr4 (58-119)||(15464600-15464661)
chr4 (28-69)||(16348334-16348375)
chr4 (45-121)||(15190704-15190780)
chr4 (29-69)||(16356596-16356636)
chr4 (41-120)||(13427-13506)
chr4 (6-57)||(17053482-17053533)
chr4 (35-118)||(40471837-40471920)
chr4 (59-117)||(386038-386096)
chr4 (5-50)||(3332275-3332321)
chr4 (59-117)||(7900855-7900913)
chr4 (59-117)||(15321778-15321836)
chr4 (41-91)||(32851868-32851918)
chr4 (35-117)||(40478511-40478593)
chr4 (59-117)||(51493502-51493560)
chr4 (29-90)||(44676047-44676108)
chr4 (29-65)||(3413212-3413248)
chr4 (29-69)||(13569948-13569988)
chr4 (29-69)||(15094209-15094249)
chr4 (29-69)||(15121446-15121486)
chr4 (4-104)||(16956279-16956379)
chr4 (29-65)||(18602399-18602435)
chr4 (29-65)||(18608993-18609029)
chr4 (29-69)||(23843915-23843955)
[»] scaffold0122 (2 HSPs)
scaffold0122 (6-137)||(25684-25815)
scaffold0122 (5-141)||(33112-33248)
[»] scaffold0042 (1 HSPs)
scaffold0042 (6-141)||(23921-24055)
[»] scaffold0021 (4 HSPs)
scaffold0021 (5-141)||(124952-125085)
scaffold0021 (30-137)||(62932-63039)
scaffold0021 (5-70)||(175202-175267)
scaffold0021 (138-167)||(124785-124814)
[»] scaffold0413 (1 HSPs)
scaffold0413 (5-141)||(15233-15369)
[»] scaffold0358 (2 HSPs)
scaffold0358 (5-121)||(312-428)
scaffold0358 (5-121)||(5088-5204)
[»] scaffold0193 (1 HSPs)
scaffold0193 (5-121)||(13587-13703)
[»] scaffold0100 (1 HSPs)
scaffold0100 (5-141)||(20480-20615)
[»] scaffold0056 (2 HSPs)
scaffold0056 (5-141)||(16833-16968)
scaffold0056 (5-122)||(78980-79097)
[»] scaffold0003 (2 HSPs)
scaffold0003 (5-137)||(339569-339701)
scaffold0003 (5-65)||(71729-71789)
[»] scaffold0075 (2 HSPs)
scaffold0075 (6-141)||(7913-8047)
scaffold0075 (41-120)||(53125-53204)
[»] scaffold0389 (1 HSPs)
scaffold0389 (5-119)||(13226-13340)
[»] scaffold1842 (1 HSPs)
scaffold1842 (5-118)||(678-791)
[»] scaffold0718 (1 HSPs)
scaffold0718 (5-121)||(4760-4876)
[»] scaffold0639 (1 HSPs)
scaffold0639 (5-141)||(8842-8978)
[»] scaffold0456 (1 HSPs)
scaffold0456 (5-121)||(10055-10171)
[»] scaffold0228 (4 HSPs)
scaffold0228 (6-141)||(4874-5010)
scaffold0228 (6-141)||(12456-12592)
scaffold0228 (6-141)||(22408-22544)
scaffold0228 (29-69)||(18286-18326)
[»] scaffold0221 (1 HSPs)
scaffold0221 (5-121)||(12427-12543)
[»] scaffold0120 (3 HSPs)
scaffold0120 (6-134)||(16461-16588)
scaffold0120 (5-137)||(32577-32709)
scaffold0120 (5-137)||(46296-46428)
[»] scaffold0080 (1 HSPs)
scaffold0080 (5-137)||(40283-40414)
[»] scaffold0037 (1 HSPs)
scaffold0037 (5-141)||(79950-80085)
[»] scaffold0647 (1 HSPs)
scaffold0647 (5-138)||(5739-5872)
[»] scaffold0142 (2 HSPs)
scaffold0142 (20-141)||(17147-17268)
scaffold0142 (87-141)||(7471-7524)
[»] scaffold0034 (2 HSPs)
scaffold0034 (20-141)||(51517-51638)
scaffold0034 (41-121)||(32923-33003)
[»] scaffold0839 (1 HSPs)
scaffold0839 (5-141)||(1696-1831)
[»] scaffold0598 (1 HSPs)
scaffold0598 (5-121)||(681-797)
[»] scaffold0427 (1 HSPs)
scaffold0427 (5-121)||(13871-13987)
[»] scaffold0217 (1 HSPs)
scaffold0217 (15-139)||(16227-16351)
[»] scaffold0166 (1 HSPs)
scaffold0166 (5-141)||(9452-9587)
[»] scaffold0145 (1 HSPs)
scaffold0145 (5-141)||(39127-39262)
[»] scaffold0403 (1 HSPs)
scaffold0403 (6-121)||(5224-5339)
[»] scaffold0395 (2 HSPs)
scaffold0395 (5-120)||(580-695)
scaffold0395 (5-121)||(8110-8226)
[»] scaffold0130 (1 HSPs)
scaffold0130 (5-120)||(28924-29039)
[»] scaffold0351 (1 HSPs)
scaffold0351 (5-119)||(16657-16771)
[»] scaffold0161 (1 HSPs)
scaffold0161 (6-119)||(2064-2177)
[»] scaffold0113 (1 HSPs)
scaffold0113 (8-121)||(32440-32553)
[»] scaffold0540 (1 HSPs)
scaffold0540 (5-137)||(631-763)
[»] scaffold0347 (1 HSPs)
scaffold0347 (5-121)||(415-530)
[»] scaffold0218 (1 HSPs)
scaffold0218 (6-118)||(28899-29011)
[»] scaffold0031 (2 HSPs)
scaffold0031 (5-122)||(20044-20161)
scaffold0031 (5-72)||(65412-65479)
[»] scaffold0490 (1 HSPs)
scaffold0490 (5-121)||(2328-2444)
[»] scaffold0309 (1 HSPs)
scaffold0309 (5-121)||(6986-7102)
[»] scaffold0114 (3 HSPs)
scaffold0114 (5-121)||(15094-15210)
scaffold0114 (5-79)||(32894-32968)
scaffold0114 (37-69)||(7726-7758)
[»] scaffold0064 (2 HSPs)
scaffold0064 (5-121)||(47362-47478)
scaffold0064 (29-69)||(64306-64346)
[»] scaffold0192 (1 HSPs)
scaffold0192 (6-121)||(10297-10412)
[»] scaffold0151 (1 HSPs)
scaffold0151 (5-112)||(10540-10647)
[»] scaffold0088 (1 HSPs)
scaffold0088 (6-121)||(21277-21392)
[»] scaffold0261 (2 HSPs)
scaffold0261 (5-119)||(16047-16161)
scaffold0261 (5-77)||(1768-1840)
[»] scaffold0235 (2 HSPs)
scaffold0235 (35-121)||(11172-11258)
scaffold0235 (41-92)||(14055-14106)
[»] scaffold0231 (1 HSPs)
scaffold0231 (28-134)||(23256-23362)
[»] scaffold0124 (1 HSPs)
scaffold0124 (5-141)||(24268-24404)
[»] scaffold0247 (1 HSPs)
scaffold0247 (8-116)||(6449-6557)
[»] scaffold0556 (2 HSPs)
scaffold0556 (18-137)||(7182-7301)
scaffold0556 (41-121)||(8403-8483)
[»] scaffold0484 (1 HSPs)
scaffold0484 (29-121)||(1290-1382)
[»] scaffold0070 (1 HSPs)
scaffold0070 (5-137)||(4894-5026)
[»] scaffold0028 (1 HSPs)
scaffold0028 (18-138)||(133023-133143)
[»] scaffold0150 (1 HSPs)
scaffold0150 (28-138)||(32453-32563)
[»] scaffold0001 (1 HSPs)
scaffold0001 (28-137)||(161056-161165)
[»] scaffold0475 (1 HSPs)
scaffold0475 (5-137)||(9447-9579)
[»] scaffold0165 (3 HSPs)
scaffold0165 (29-121)||(3857-3949)
scaffold0165 (29-121)||(7921-8013)
scaffold0165 (41-120)||(27296-27375)
[»] scaffold0503 (1 HSPs)
scaffold0503 (20-122)||(12314-12416)
[»] scaffold0211 (1 HSPs)
scaffold0211 (29-118)||(28451-28540)
[»] scaffold0102 (1 HSPs)
scaffold0102 (28-137)||(19637-19746)
[»] scaffold0628 (1 HSPs)
scaffold0628 (18-138)||(2434-2554)
[»] scaffold0032 (2 HSPs)
scaffold0032 (9-121)||(51955-52067)
scaffold0032 (35-106)||(108984-109055)
[»] scaffold0084 (1 HSPs)
scaffold0084 (5-138)||(10535-10661)
[»] scaffold0023 (2 HSPs)
scaffold0023 (18-137)||(101765-101884)
scaffold0023 (18-79)||(39640-39701)
[»] scaffold0207 (1 HSPs)
scaffold0207 (28-122)||(2285-2379)
[»] scaffold0810 (1 HSPs)
scaffold0810 (28-121)||(3319-3412)
[»] scaffold0423 (1 HSPs)
scaffold0423 (5-85)||(10890-10970)
[»] scaffold0555 (2 HSPs)
scaffold0555 (5-139)||(949-1082)
scaffold0555 (19-97)||(10200-10278)
[»] scaffold1984 (1 HSPs)
scaffold1984 (18-137)||(501-620)
[»] scaffold0138 (3 HSPs)
scaffold0138 (19-121)||(13327-13429)
scaffold0138 (4-118)||(29836-29950)
scaffold0138 (4-118)||(41832-41946)
[»] scaffold0125 (1 HSPs)
scaffold0125 (35-137)||(45437-45539)
[»] scaffold1137 (1 HSPs)
scaffold1137 (29-116)||(1943-2030)
[»] scaffold0278 (1 HSPs)
scaffold0278 (18-121)||(5980-6083)
[»] scaffold0116 (2 HSPs)
scaffold0116 (39-121)||(43436-43518)
scaffold0116 (39-121)||(47356-47438)
[»] scaffold0106 (3 HSPs)
scaffold0106 (5-121)||(1662-1778)
scaffold0106 (5-121)||(7639-7755)
scaffold0106 (5-72)||(16083-16150)
[»] scaffold0004 (2 HSPs)
scaffold0004 (5-77)||(70224-70296)
scaffold0004 (59-118)||(58102-58161)
[»] scaffold2044 (1 HSPs)
scaffold2044 (6-65)||(1075-1134)
[»] scaffold0621 (1 HSPs)
scaffold0621 (18-121)||(6924-7026)
[»] scaffold0010 (2 HSPs)
scaffold0010 (18-121)||(130294-130397)
scaffold0010 (4-118)||(242420-242534)
[»] scaffold0020 (2 HSPs)
scaffold0020 (35-121)||(15478-15564)
scaffold0020 (19-72)||(179085-179138)
[»] scaffold0530 (1 HSPs)
scaffold0530 (41-114)||(682-755)
[»] scaffold0078 (1 HSPs)
scaffold0078 (41-121)||(10915-10995)
[»] scaffold0346 (1 HSPs)
scaffold0346 (6-65)||(17343-17402)
[»] scaffold0107 (1 HSPs)
scaffold0107 (6-65)||(15049-15108)
[»] scaffold0333 (2 HSPs)
scaffold0333 (19-121)||(7000-7102)
scaffold0333 (19-121)||(14380-14482)
[»] scaffold0507 (1 HSPs)
scaffold0507 (41-118)||(7711-7788)
[»] scaffold0139 (1 HSPs)
scaffold0139 (5-70)||(20418-20483)
[»] scaffold0243 (1 HSPs)
scaffold0243 (41-117)||(5776-5852)
[»] scaffold0367 (1 HSPs)
scaffold0367 (28-79)||(1319-1370)
[»] scaffold0320 (1 HSPs)
scaffold0320 (58-121)||(12382-12445)
[»] scaffold0280 (1 HSPs)
scaffold0280 (26-69)||(18942-18985)
[»] scaffold0012 (1 HSPs)
scaffold0012 (58-121)||(227879-227942)
[»] scaffold0327 (1 HSPs)
scaffold0327 (29-91)||(680-742)
[»] scaffold0046 (1 HSPs)
scaffold0046 (5-71)||(14914-14980)
[»] scaffold0676 (1 HSPs)
scaffold0676 (28-69)||(4863-4904)
[»] scaffold0586 (1 HSPs)
scaffold0586 (35-116)||(2245-2326)
[»] scaffold0525 (1 HSPs)
scaffold0525 (4-117)||(3505-3618)
[»] scaffold0393 (1 HSPs)
scaffold0393 (28-69)||(1926-1967)
[»] scaffold0233 (1 HSPs)
scaffold0233 (4-117)||(14169-14282)
[»] scaffold0216 (2 HSPs)
scaffold0216 (4-117)||(8506-8619)
scaffold0216 (29-69)||(16764-16804)
[»] scaffold0198 (1 HSPs)
scaffold0198 (19-72)||(26834-26887)
[»] scaffold0167 (1 HSPs)
scaffold0167 (19-72)||(36024-36077)
[»] scaffold0131 (1 HSPs)
scaffold0131 (19-72)||(36891-36944)
[»] scaffold0079 (1 HSPs)
scaffold0079 (28-69)||(44486-44527)
[»] scaffold0008 (1 HSPs)
scaffold0008 (28-69)||(30387-30428)
[»] scaffold0761 (1 HSPs)
scaffold0761 (20-72)||(5943-5995)
[»] scaffold0476 (2 HSPs)
scaffold0476 (29-69)||(6018-6058)
scaffold0476 (29-69)||(7213-7253)
[»] scaffold0412 (1 HSPs)
scaffold0412 (29-69)||(6059-6099)
[»] scaffold0158 (2 HSPs)
scaffold0158 (29-69)||(3275-3315)
scaffold0158 (29-69)||(6941-6981)
[»] scaffold0035 (1 HSPs)
scaffold0035 (29-69)||(46370-46410)
[»] scaffold0029 (2 HSPs)
scaffold0029 (29-69)||(13194-13234)
scaffold0029 (59-117)||(125797-125855)
[»] scaffold1895 (1 HSPs)
scaffold1895 (29-72)||(891-934)
[»] scaffold0210 (2 HSPs)
scaffold0210 (29-72)||(21449-21492)
scaffold0210 (29-72)||(29341-29384)
[»] scaffold0109 (2 HSPs)
scaffold0109 (41-92)||(35524-35575)
scaffold0109 (59-117)||(27006-27064)
[»] scaffold0022 (1 HSPs)
scaffold0022 (45-120)||(80726-80801)
[»] scaffold0259 (1 HSPs)
scaffold0259 (59-117)||(10541-10599)
[»] scaffold0013 (1 HSPs)
scaffold0013 (59-117)||(9704-9762)
[»] scaffold1296 (1 HSPs)
scaffold1296 (28-65)||(830-867)
[»] scaffold0615 (1 HSPs)
scaffold0615 (28-69)||(1726-1767)
[»] scaffold0215 (1 HSPs)
scaffold0215 (35-72)||(27256-27293)
[»] scaffold0171 (1 HSPs)
scaffold0171 (28-65)||(35163-35200)
[»] scaffold0051 (1 HSPs)
scaffold0051 (4-117)||(37071-37184)
[»] scaffold0044 (1 HSPs)
scaffold0044 (36-117)||(8423-8504)
[»] scaffold0005 (1 HSPs)
scaffold0005 (36-117)||(307460-307541)
[»] scaffold1552 (1 HSPs)
scaffold1552 (29-65)||(769-805)
[»] scaffold1124 (1 HSPs)
scaffold1124 (37-69)||(2312-2344)
[»] scaffold0324 (1 HSPs)
scaffold0324 (29-69)||(15837-15877)
[»] scaffold0311 (1 HSPs)
scaffold0311 (29-69)||(6721-6761)
[»] scaffold0104 (2 HSPs)
scaffold0104 (35-91)||(2240-2296)
scaffold0104 (35-91)||(9922-9978)
[»] scaffold0076 (1 HSPs)
scaffold0076 (41-121)||(24174-24254)
[»] scaffold0043 (1 HSPs)
scaffold0043 (29-69)||(18676-18716)


Alignment Details
Target: scaffold0352 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 17626 - 17762
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17626 cagagagcatgcaagatttcatgattttgacttttgagttaaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 17725  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||||||||||||||||||||||||||||||||    
T  17726 atgagattgaacctggatagattgtagaatgaaactt 17762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 167
Target Start/End: Original strand, 17879 - 17908
Alignment:
Q  138 acttaatgaggatgttaattataatctgtg 167  Q
    ||||||||||||||||||||||||||||||    
T  17879 acttaatgaggatgttaattataatctgtg 17908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 9509692 - 9509556
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9509692 cagagagcatgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 9509593  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| |||||||||||||||||||    
T  9509592 atgagattgaacctggaaagattgtagaatgaaactt 9509556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 12699335 - 12699200
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12699335 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 12699236  T
Q  105 atgagattgaacctggatagattgtagaatgaaact 140  Q
    |||| |||||||||||| ||||||| ||||||||||    
T  12699235 atgaaattgaacctggaaagattgttgaatgaaact 12699200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 38227982 - 38227848
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  38227982 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaa 38227883  T
Q  106 tgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||||||||||| ||||| |||||||||||||    
T  38227882 tgagattgaacctggaaagatt-tagaatgaaactt 38227848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 3563982 - 3564114
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||| | |||||| ||||||||||||  |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3563982 cagagagcttgcaagatttcgttattttgacttttgagttgattcttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 3564081  T
Q  105 atgagattgaacctggatagattgtagaatgaa 137  Q
    ||||||||||||||||| |||||||||||||||    
T  3564082 atgagattgaacctggaaagattgtagaatgaa 3564114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 39267264 - 39267399
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  |||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  39267264 cagagagcatgcaagattttgtgattttgacttttgagttgaaccttatatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 39267363  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||| | |||||||||||||    
T  39267364 atgagattgaacctggaaagact-tagaatgaaactt 39267399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 9751168 - 9751303
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  9751168 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 9751267  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||| ||||||||||| ||| | |||||||||||||    
T  9751268 atgaggttgaacctggaaagact-tagaatgaaactt 9751303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 16385876 - 16385992
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  | |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16385876 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 16385975  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  16385976 atgagattgaacctgga 16385992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 2831924 - 2832037
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  2831924 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 2832023  T
Q  105 atgagattgaacct 118  Q
    ||||||||||||||    
T  2832024 atgagattgaacct 2832037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 17061593 - 17061714
Alignment:
Q  20 atttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    ||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||    
T  17061593 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 17061692  T
Q  120 gatagattgtagaatgaaactt 141  Q
    |||||||| |||||| ||||||    
T  17061693 gatagattttagaataaaactt 17061714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 18302681 - 18302546
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||| ||||  |||||||||||||||||||| ||| | ||||||||||||||||||    
T  18302681 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcccttgagtgcctgaacatgtctaatatttattaggaaagaatgtagg 18302582  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||| | |||||||||||||    
T  18302581 atgagattgaacctggaaagact-tagaatgaaactt 18302546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 27847462 - 27847578
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||| ||||    
T  27847462 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatttagg 27847561  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  27847562 atgagattgaacctgga 27847578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 40443880 - 40443764
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||| ||||||||||||||| |  ||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  40443880 cagaaagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagg 40443781  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  40443780 atgagattgaacctgga 40443764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 28504919 - 28505033
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  | |||||| |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||     
T  28504919 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 28505018  T
Q  105 atgagattgaacctg 119  Q
    |||||||||||||||    
T  28505019 atgagattgaacctg 28505033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 15754505 - 15754621
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||||    ||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||     
T  15754505 cagagagcatgcaagatttcgaatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtaga 15754604  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  15754605 atgagattgaacctgga 15754621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 26212488 - 26212372
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  | |||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||| | |||||| |||||||||||    
T  26212488 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatatttattaggtaagaatgtagg 26212389  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  26212388 atgagattgaacctgga 26212372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 12756358 - 12756452
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggat 122  Q
    |||||| |||||||||||| ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  12756358 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggat 12756452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 34201286 - 34201172
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| ||||||||||||| |||||||||||| |||||||| | |||||||| |||     
T  34201286 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgatcaagaaagaatttaga 34201187  T
Q  105 atgagattgaacctg 119  Q
    |||||||||||||||    
T  34201186 atgagattgaacctg 34201172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 15143654 - 15143787
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggctttt-gagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||| | ||| ||||||| |||||||| ||||| |||||| |||||| |||| ||||||||||||||||||||| ||||||||||||||||| | |||    
T  15143654 cagagaacttgcgagatttcgtgattttgactttttgagttgtaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagattttag 15143753  T
Q  104 gatgagattgaacctggatagattgtagaatgaa 137  Q
     ||||||||||||||||| ||||| |||||||||    
T  15143754 aatgagattgaacctggaaagattttagaatgaa 15143787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 44116984 - 44116872
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagatt 127  Q
    |||||| || ||||||||| |||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  44116984 attttgactcttgagttgatccttatatgcctttgagtccctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacccggaaagatt 44116885  T
Q  128 gtagaatgaaactt 141  Q
     |||||||||||||    
T  44116884 -tagaatgaaactt 44116872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 44014664 - 44014545
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| ||||||||||||  |||| ||| |||||||||||||||||||||| ||||||||||||||||| || || |||||||||||||    
T  44014664 agatttcgtaattttgacttttgagttgatacttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 44014565  T
Q  118 tggatagattgtagaatgaa 137  Q
    |||| ||||| |||||||||    
T  44014564 tggaaagattttagaatgaa 44014545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 11995676 - 11995768
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaaga 97  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  11995676 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 11995768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 810760 - 810879
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| |||||||||||| ||||| ||| |||||||||||||||||| ||| ||||||||||||||||| || || || ||||||||||    
T  810760 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatatctaataatgattaggaaagattggagaataagattgaacc 810859  T
Q  118 tggatagattgtagaatgaa 137  Q
    |||| ||| | |||||||||    
T  810860 tggaaagaatttagaatgaa 810879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 68236 - 68133
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| |||||||||||| ||||| ||| ||| ||||||||||| |||||| ||||||||||||||||| || ||  ||||||||||||    
T  68236 agatttcgtaattttgacttttgagttgatccttaaatgttttcgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacc 68137  T
Q  118 tgga 121  Q
    ||||    
T  68136 tgga 68133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 18006131 - 18006052
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaaga 97  Q
    ||||||| | |||||| |||||||||||| ||||| ||| |||||||||||||||||||||| |||||||||| ||||||    
T  18006131 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaaga 18006052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 16324495 - 16324393
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||| | |||||| | ||| |||||||||||  ||| |||||||||| ||||||||||| ||||||||||||||||| || ||  |||||||||||||    
T  16324495 gatttcgtaattttgacctttaagttgaaccttgaatgtttttgagtgcttgaacatgtctaataatgattaggaaagattggagtttgagattgaacct 16324396  T
Q  119 gga 121  Q
    |||    
T  16324395 gga 16324393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 47832297 - 47832219
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaaga 97  Q
    |||||| | |||||| | ||| |||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  47832297 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 47832219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 19649103 - 19649170
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| ||| |||||||||||||||    
T  19649103 cagagagcatgcaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 19649170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 16219348 - 16219450
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||||| |||||| | ||| |||||||||||| ||| ||||||||| || ||| ||| | ||||||||||||||||| | |||  |||||||||||||    
T  16219348 gatttcataattttgacctttaagttgaaccttagatgtttttgagtgtctaaacttgtataataatgattaggaaagattttagattgagattgaacct 16219447  T
Q  119 gga 121  Q
    |||    
T  16219448 gga 16219450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 44407988 - 44408102
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||    |||| | ||||| |||||||||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  44407988 gcagagagcatgtaagattttgaaatttcgactttttagttgaaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 44408087  T
Q  104 gatgagattgaacct 118  Q
    ||  |||||||||||    
T  44408088 gacaagattgaacct 44408102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 22073383 - 22073306
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    ||||| |||||| | | |||||||||||||||||||| | ||||||||||| ||||| | ||| ||||||||||||||    
T  22073383 agttggaccttagaggtttttgagtgcctgaacatgtgtaataatgattagaaaagattctagaatgagattgaacct 22073306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 9389337 - 9389429
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    ||||| ||||| |||||||||||  ||| ||||||||| ||| || ||| | || |||||||||||||| |||||  ||||||||||||||||    
T  9389337 ttttgacttttaagttgaaccttggatgtttttgagtgtctggacttgtataatgatgattaggaaagattgtagattgagattgaacctgga 9389429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 21064780 - 21064896
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||  ||||||||   | |||||| ||||||| ||| || |||| ||||||||||||   ||||||||||||||| | | |||     
T  21064780 cagagagcttgcaagattttgtgattttgagctgtgagtttaaccttagatgtttatgagggcctgaacatgtacaataatgattaggaaatattttaga 21064879  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||| ||||    
T  21064880 atgagattgaacttgga 21064896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 24054969 - 24054897
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgt 77  Q
    ||||| |||||||||||||  |  ||||| |||||||||||||||||| ||| ||||||||||||||| ||||    
T  24054969 cagagtgcatgcaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgt 24054897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 2760605 - 2760542
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattag 91  Q
    |||||| |||||||||||||||||| |||||||||||||||| || |||| | |||| ||||||    
T  2760605 attttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataaagattag 2760542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 3272265 - 3272202
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattag 91  Q
    |||||| |||||||||||||||||| |||||||||||||||| || |||| | |||| ||||||    
T  3272265 attttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataaagattag 3272202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 12255462 - 12255525
Alignment:
Q  58 ttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||||||| ||||||||| | ||||||||||||||||| | |||  ||||||||||||||||    
T  12255462 ttttgagtgcttgaacatgtataataatgattaggaaagattctagattgagattgaacctgga 12255525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 14953674 - 14953560
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||    |||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  14953674 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 14953575  T
Q  104 gatgagattgaacct 118  Q
    ||  |||||||||||    
T  14953574 gacaagattgaacct 14953560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 14959640 - 14959526
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||    |||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  14959640 gcagagagcatgtaagatttttcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 14959541  T
Q  104 gatgagattgaacct 118  Q
    ||  |||||||||||    
T  14959540 gacaagattgaacct 14959526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 26420454 - 26420340
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||    |||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  26420454 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 26420355  T
Q  104 gatgagattgaacct 118  Q
    ||  |||||||||||    
T  26420354 gacaagattgaacct 26420340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 2279789 - 2279850
Alignment:
Q  58 ttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    |||||||||||||||||||  | ||||||||||||||||| | |||  ||||||||||||||    
T  2279789 ttttgagtgcctgaacatgcataataatgattaggaaagattttagattgagattgaacctg 2279850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 18154469 - 18154522
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    |||||| | |||||| |||||||||||||||||| ||| |||||||||||||||    
T  18154469 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 18154522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 12187490 - 12187450
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  12187490 ttttgacttttgagttgaaccttagatgcttttgagtgcct 12187450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 17137706 - 17137746
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  17137706 ttttgacttttgagttgaaccttagatgcttttgagtgcct 17137746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 2529631 - 2529682
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattagg 92  Q
    |||||||||||| ||| ||||||||||||||| |||| | ||||||||||||    
T  2529631 agttgaaccttagatgattttgagtgcctgaatatgtataataatgattagg 2529682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 10508725 - 10508768
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||    
T  10508725 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 10508768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 14149046 - 14148932
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||    |||| | ||||| ||||| |||||   ||| ||| |||||||||||||  ||  ||||||||||||| ||||||||    
T  14149046 gcagagagcatgtaagatttttcaatttcgactttttagttggaccttgagtgcctttaagtgcctgaacatacctagtaatgattaggaatgaatgtag 14148947  T
Q  104 gatgagattgaacct 118  Q
    ||  |||||||||||    
T  14148946 gacaagattgaacct 14148932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 69
Target Start/End: Complemental strand, 15211899 - 15211865
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||||||||||||||| ||||||||||||||||    
T  15211899 cttttgagttgaaccttagatgcttttgagtgcct 15211865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 20702651 - 20702733
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||| ||||| |||||  |||| || ||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  20702651 ctttttagttggaccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 20702733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 32768120 - 32768038
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||| ||||| |||||  |||| || ||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  32768120 ctttttagttggaccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 32768038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 167
Target Start/End: Complemental strand, 9509418 - 9509389
Alignment:
Q  138 acttaatgaggatgttaattataatctgtg 167  Q
    ||||||||||||||||||||||||||||||    
T  9509418 acttaatgaggatgttaattataatctgtg 9509389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 11547953 - 11548010
Alignment:
Q  61 tgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||||||||||||  ||  ||||||||||||| ||||||||||  |||||||||||    
T  11547953 tgagtgcctgaacatacctagtaatgattaggaatgaatgtaggaaaagattgaacct 11548010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 11554549 - 11554606
Alignment:
Q  61 tgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||||||||||||  ||  ||||||||||||| ||||||||||  |||||||||||    
T  11554549 tgagtgcctgaacatacctagtaatgattaggaatgaatgtaggaaaagattgaacct 11554606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 11880729 - 11880668
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgatta 90  Q
    ||||| |||||||||||||||||| ||| |||||||||||| || |||| |  |||||||||    
T  11880729 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgatta 11880668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 14430356 - 14430315
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||| ||||||| ||||||||||||||||    
T  14430356 attttgacttttgagttaaaccttagatgcttttgagtgcct 14430315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 14655082 - 14655147
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggat 106  Q
    |||||||||||  |||| |||||||||||||||||  ||  || |||||||||| |||||||||||    
T  14655082 agttgaaccttgcatgcctttgagtgcctgaacatacctagtattgattaggaatgaatgtaggat 14655147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 42205567 - 42205530
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagt 65  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  42205567 attttgacttttgagttgaaccttagatgcttttgagt 42205530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 8917878 - 8917842
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagt 65  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  8917878 ttttgacttttgagttgaaccttagatgcttttgagt 8917842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 9703743 - 9703703
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  9703743 ttttgacttttgagttgaaccttagatgtttttgagtgcct 9703703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 13462213 - 13462177
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagt 65  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  13462213 ttttgacttttgagttgaaccttagatgcttttgagt 13462177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 15581144 - 15581108
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagt 65  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  15581144 ttttgacttttgagttgaaccttagatgcttttgagt 15581108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 15604926 - 15604962
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagt 65  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  15604926 ttttgacttttgagttgaaccttagatgcttttgagt 15604962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 18878855 - 18878991
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18878855 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 18878954  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| |||||||||||||||||||    
T  18878955 atgagattgaacctggaaagattgtagaatgaaactt 18878991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 20536711 - 20536574
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  |||||||| |||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20536711 cagagagcatgcaagattttgtgattttgactttcgagttgaaccttagatgcttttgagtgcctgaacatgtctgataatgattaggaaagaatgtagg 20536612  T
Q  105 atgagattgaacctggatagattgtagaatgaaactta 142  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  20536611 atgagattgaacctggaaagattgtagaatgaaactta 20536574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 18818028 - 18818164
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  18818028 cagagagcatgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagg 18818127  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  18818128 atgagattgaacctggaaagattgtaaaatgaaactt 18818164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 23406884 - 23406748
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23406884 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 23406785  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  23406784 atgagattggacctggaaagattgtagaatgaaactt 23406748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 22627238 - 22627106
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22627238 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22627139  T
Q  105 atgagattgaacctggatagattgtagaatgaa 137  Q
    |||||||||||||| || |||||||||||||||    
T  22627138 atgagattgaacctcgaaagattgtagaatgaa 22627106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 28648663 - 28648795
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  28648663 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtagga 28648762  T
Q  106 tgagattgaacctggatagattgtagaatgaaac 139  Q
    ||||||||||| |||| ||||| |||||||||||    
T  28648763 tgagattgaacatggaaagatt-tagaatgaaac 28648795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 7373229 - 7373116
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagatt 127  Q
    |||||| |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||    
T  7373229 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaaagatt 7373130  T
Q  128 gtagaatgaaactt 141  Q
    ||||||||||||||    
T  7373129 gtagaatgaaactt 7373116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 31971747 - 31971631
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| || ||||| |||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||| |||||||    
T  31971747 cagagagcatgcaagatttcgtgtttttgacttttgagttgaaccttagatgcttttgtgtgcctgaacatgtctaataatgattaggaaaggatgtagg 31971648  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  31971647 atgagattgaacctgga 31971631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 41598687 - 41598551
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| |||| |||| | |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||     
T  41598687 cagagagcttgcaggattccgtgattttgacttttgagttgacccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtaga 41598588  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  41598587 atgagattgaacctggaaagattttagaatgaaactt 41598551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 6759759 - 6759624
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||| ||||||||||| |||||||| |||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| |    
T  6759759 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagaa 6759660  T
Q  106 tgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||| |||| | ||| |||||||||||||    
T  6759659 tgagattgaacttggaaatattttagaatgaaactt 6759624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 5865895 - 5866009
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||     
T  5865895 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 5865994  T
Q  105 atgagattgaacctg 119  Q
    |||||||||||||||    
T  5865995 atgagattgaacctg 5866009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 16199276 - 16199389
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16199276 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttggatgcttttgagtgccttaacatgtcttataatgattaggaaagaatgtagg 16199375  T
Q  105 atgagattgaacct 118  Q
    ||||||||||||||    
T  16199376 atgagattgaacct 16199389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 23649055 - 23648942
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  23649055 agagagcatgcaagatttcatgtttttgacttttgagttgatccttagatgcttttgagtgactgaacatgtctaataatgattaggaaagaatgtagga 23648956  T
Q  106 tgagattgaacctg 119  Q
    |||||||| |||||    
T  23648955 tgagattggacctg 23648942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 45130649 - 45130765
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||| ||||||||||||| |  ||||| ||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45130649 cagagaccatgcaagatttcgtatttttgacttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 45130748  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  45130749 atgagattgaacctgga 45130765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 21491495 - 21491382
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  | |||||| ||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||     
T  21491495 cagagagcatgcaagattttgtaattttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 21491396  T
Q  105 atgagattgaacct 118  Q
    ||||||||||||||    
T  21491395 atgagattgaacct 21491382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 21255722 - 21255606
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||||    ||||| |||||||||||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  21255722 cagagagcatgcaagatttcgcatttttgacttttgagttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtagg 21255623  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  21255622 atgagattgaacctgga 21255606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 21918628 - 21918744
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||| ||||||||||||||| | |||||| |||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| ||||||||||||    
T  21918628 cagacagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgctttggagtgcctgaacatgtctaataatgattagaaaagaatgtagg 21918727  T
Q  105 atgagattgaacctgga 121  Q
    | |||||||||||||||    
T  21918728 aagagattgaacctgga 21918744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 21923546 - 21923681
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||  ||||||  |||||||| |||||||||||| ||||| ||||||||||||| |||||||||||| ||||||||||||| ||||||||||    
T  21923546 cagagagcatgtgagattttgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctaataatgattaggacagaatgtagg 21923645  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||| | ||||| |||||||||||||    
T  21923646 atgagattgaacctgaaaagatt-tagaatgaaactt 21923681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 16091959 - 16092073
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||| |||||||| |||||||||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||     
T  16091959 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtaga 16092058  T
Q  105 atgagattgaacctg 119  Q
    |||||||| ||||||    
T  16092059 atgagattaaacctg 16092073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 17141416 - 17141302
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  |  ||||  |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||     
T  17141416 cagagagcatgcaagattttgtattttttacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 17141317  T
Q  105 atgagattgaacctg 119  Q
    |||||||||||||||    
T  17141316 atgagattgaacctg 17141302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 21249884 - 21249768
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||||    ||||| |||||||||||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||    
T  21249884 cagagagcatgcaagatttcgcatttttgacttttgagttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtagg 21249785  T
Q  105 atgagattgaacctgga 121  Q
    |||||| ||||||||||    
T  21249784 atgagactgaacctgga 21249768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 19801045 - 19801161
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||| |||| | ||||||||||||||||||| ||||||||||||||||| |  ||     
T  19801045 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcatatgagtgcctgaacatgtctaataatgattaggaaagactagaga 19801144  T
Q  105 atgagattgaacctgga 121  Q
    || ||||||||||||||    
T  19801145 ataagattgaacctgga 19801161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 25362793 - 25362885
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    ||||| |||||||||||||||||| |||| |||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  25362793 ttttgacttttgagttgaaccttagatgcctttgagtgactgaacatgactaataatgattaggaaagaatgtaggatgagattgaacctgga 25362885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 22875568 - 22875432
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||| |||||||| | |||||||| | ||||| ||||||||||| | || ||||||| | ||||||||||||||||| |||||     
T  22875568 cagagagcttgcaagatttcgtgattttgacctttgagttaatccttagatgcttttgagcgtctaaacatgtttaataatgattaggaaagattgtaga 22875469  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    | ||| ||||||||||| ||||| |||||||||||||    
T  22875468 acgaggttgaacctggaaagattttagaatgaaactt 22875432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 21674195 - 21674076
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| |||||||||||| ||||  | | |||||||||||||||||||||| ||||||||||||||||| || || |||||||||||||    
T  21674195 agatttcgtaattttgacttttgagttgatccttggacgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 21674096  T
Q  118 tggatagattgtagaatgaa 137  Q
    |||| ||||| |||||||||    
T  21674095 tggaaagattttagaatgaa 21674076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 26355329 - 26355448
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||| ||| || ||  ||||||||||||    
T  26355329 agatttcgtaattttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggagagattgaagattgagattgaacc 26355428  T
Q  118 tggatagattgtagaatgaa 137  Q
    |||| ||| | |||||||||    
T  26355429 tggaaagactttagaatgaa 26355448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 21389071 - 21389138
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| |||||||||||||||||||    
T  21389071 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaa 21389138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 38854883 - 38854961
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaaga 97  Q
    |||||| | |||||| | ||| |||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  38854883 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 38854961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 39834295 - 39834219
Alignment:
Q  45 gaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||||| ||| |||||||||||| ||| ||| | ||||||||||||||||| |||||  ||||||||||||||||    
T  39834295 gaaccttagatgtttttgagtgcctaaacttgtatgataatgattaggaaagattgtagattgagattgaacctgga 39834219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 6520857 - 6520779
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaaga 97  Q
    |||||| | |||||| | ||| |||||||||||| ||| ||||||||| |||||||||||| ||||| |||||||||||    
T  6520857 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgtctgaacatgtctaataataattaggaaaga 6520779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 20499130 - 20499049
Alignment:
Q  38 ttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    ||||||||||| ||| ||| |||||||||||||||||||| | |||||||||||| |||  | |||  ||||||||||||||    
T  20499130 ttgagttgaactttagatgattttgagtgcctgaacatgtataataatgattaggtaagtttttagattgagattgaacctg 20499049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 121
Target Start/End: Original strand, 23760481 - 23760574
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||| |||||||||||| || |  ||| |||||||| ||||||||||||| ||||||||||||||| | || |   ||||||||||||||||    
T  23760481 attttgacttttgagttgatccctgaatgtttttgagttcctgaacatgtctaataatgattaggaaatattggatattgagattgaacctgga 23760574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 20527926 - 20527812
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||    |||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  20527926 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 20527827  T
Q  104 gatgagattgaacct 118  Q
    ||  |||||||||||    
T  20527826 gacaagattgaacct 20527812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 15602659 - 15602700
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  15602659 attttgacttttgagttgaaccttagatgcttttgagtgcct 15602700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 15611111 - 15611152
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  15611111 attttgacttttgagttgaaccttagatgcttttgagtgcct 15611152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 16409897 - 16409938
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  16409897 attttgacttttgagttgaaccttagatgcttttgagtgcct 16409938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 16860979 - 16861020
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  16860979 attttgacttttgagttgaaccttagatgcttttgagtgcct 16861020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 20856059 - 20856108
Alignment:
Q  20 atttcatgattttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| ||||||||  ||||||||||||||||| ||||||||||||||||    
T  20856059 atttcgtgattttgaattttgagttgaaccttagatgcttttgagtgcct 20856108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 72
Target Start/End: Original strand, 21395631 - 21395668
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    |||||||||||||||||| |||||||||||||||||||    
T  21395631 cttttgagttgaaccttagatgcttttgagtgcctgaa 21395668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 21414875 - 21414956
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaac 116  Q
    ||||| ||| |||||||| ||| ||||||||||||||| |||     |||||||||||||||| ||||| ||||||||||||    
T  21414875 ctttttagtggaaccttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 21414956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 72
Target Start/End: Original strand, 21790124 - 21790161
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    |||||||||||||||||| |||||||||||||||||||    
T  21790124 cttttgagttgaaccttagatgcttttgagtgcctgaa 21790161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 377754 - 377714
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  377754 ttttgacttttgagttgaaccttagatgcttttgagtgcct 377714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 20465682 - 20465722
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  20465682 ttttgacttttgagttgaaccttagatgcttttgagtgcct 20465722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 19111672 - 19111601
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggat 106  Q
    ||||| ||||||| ||| ||||| ||||||| |||||||||| ||  || |||||||||| |||||||||||    
T  19111672 ctttttagttgaatcttgtatgcctttgagtacctgaacatgcctagtattgattaggaatgaatgtaggat 19111601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 19117963 - 19117892
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggat 106  Q
    ||||| ||||||| ||| ||||| ||||||| |||||||||| ||  || |||||||||| |||||||||||    
T  19117963 ctttttagttgaatcttgtatgcctttgagtacctgaacatgcctagtattgattaggaatgaatgtaggat 19117892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 13507663 - 13507713
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattag 91  Q
    |||||||||||| ||| ||||||||||||||| |||| | |||||||||||    
T  13507663 agttgaaccttagatgattttgagtgcctgaatatgtataataatgattag 13507713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 13597195 - 13597245
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattag 91  Q
    |||||||||||| ||| ||||||||||||||| |||| | |||||||||||    
T  13597195 agttgaaccttagatgattttgagtgcctgaatatgtataataatgattag 13597245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 16411911 - 16412001
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||| |||||||||||||||||| ||| |||||||||||| || |||| |  ||| |||||    | |||||||||| |||||||||||    
T  16411911 attttgacttttgagttgaaccttaaatgtttttgagtgccttaagatgtgtattaaagattaaatgataatgtaggatcagattgaacct 16412001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 69
Target Start/End: Original strand, 17926356 - 17926390
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||||||||||||||| ||||||||||||||||    
T  17926356 cttttgagttgaaccttagatgcttttgagtgcct 17926390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 18865753 - 18865695
Alignment:
Q  59 tttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  18865753 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 18865695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 22010322 - 22010384
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattag 91  Q
    ||||| ||||| |||||||||||| |||||||||||||||| || |||| | |||| ||||||    
T  22010322 ttttgactttttagttgaaccttagatgcttttgagtgccttaagatgtttaataaagattag 22010384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 29123531 - 29123449
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||| ||||| |||||  ||||||| |||| |||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  29123531 ctttttagttggaccttggatgctttagagtacctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 29123449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 167
Target Start/End: Complemental strand, 7372999 - 7372970
Alignment:
Q  138 acttaatgaggatgttaattataatctgtg 167  Q
    ||||||||||||||||||||||||||||||    
T  7372999 acttaatgaggatgttaattataatctgtg 7372970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 167
Target Start/End: Original strand, 18818301 - 18818330
Alignment:
Q  138 acttaatgaggatgttaattataatctgtg 167  Q
    ||||||||||||||||||||||||||||||    
T  18818301 acttaatgaggatgttaattataatctgtg 18818330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 19899571 - 19899510
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgatta 90  Q
    ||||| |||||||||||||||||| ||| |||||||||||| || |||| |  |||||||||    
T  19899571 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgatta 19899510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 167
Target Start/End: Complemental strand, 20536437 - 20536408
Alignment:
Q  138 acttaatgaggatgttaattataatctgtg 167  Q
    ||||||||||||||||||||||||||||||    
T  20536437 acttaatgaggatgttaattataatctgtg 20536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 167
Target Start/End: Complemental strand, 22626964 - 22626935
Alignment:
Q  138 acttaatgaggatgttaattataatctgtg 167  Q
    ||||||||||||||||||||||||||||||    
T  22626964 acttaatgaggatgttaattataatctgtg 22626935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 18619930 - 18619894
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagt 65  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  18619930 ttttgacttttgagttgaaccttagatgcttttgagt 18619894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 22029009 - 22028973
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagt 65  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  22029009 ttttgacttttgagttgaaccttagatgcttttgagt 22028973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 30642934 - 30642974
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  30642934 ttttgacttttgagttgaaccttagatgtttttgagtgcct 30642974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 2e-57; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 22779845 - 22779981
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22779845 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22779944  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| |||||||||||||||||||    
T  22779945 atgagattgaacctggaaagattgtagaatgaaactt 22779981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 17287414 - 17287550
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17287414 cagagagcatgcaagatttcgtgattttgacttttgagttgacccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 17287513  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||| ||||| ||||||| |||||||||||||||||||    
T  17287514 atgtgattgtacctggaaagattgtagaatgaaactt 17287550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 19303159 - 19303294
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||     
T  19303159 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 19303258  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||| | ||||| |||||||||||||    
T  19303259 atgagattgaacctgaaaagatt-tagaatgaaactt 19303294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 20637915 - 20638028
Alignment:
Q  8 agagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatg 107  Q
    ||||||| ||||||||| | |||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20637915 agagcatccaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatg 20638014  T
Q  108 agattgaacctgga 121  Q
    ||||||||||||||    
T  20638015 agattgaacctgga 20638028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 29808501 - 29808638
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||| |||||||| |||||||  |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||     
T  29808501 cagagagcatgtaagatttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtaga 29808600  T
Q  105 atgagattgaacctggataga-ttgtagaatgaaactt 141  Q
    ||||||||||||||||| ||| || |||||||||||||    
T  29808601 atgagattgaacctggaaagatttttagaatgaaactt 29808638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 1561806 - 1561690
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||     
T  1561806 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtaga 1561707  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  1561706 atgagattgaacctgga 1561690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 18409445 - 18409580
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||| |||||| |||||||| | |||||||||| ||||| |||||||||||||||| |||||||||  ||||||||||||||||||||||     
T  18409445 cagagagcatgcaggatttcgtgattttgacctttgagttgatccttagatgcttttgagtgccttaacatgtctattaatgattaggaaagaatgtaga 18409544  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  18409545 atgagattgaacctggaaagatt-tagaatgaaactt 18409580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 28496091 - 28496226
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||| |||||||| |||||||  |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||     
T  28496091 cagagagcatgtaagatttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtaga 28496190  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||| | |||||||||||||    
T  28496191 atgagattgaacctggaaagact-tagaatgaaactt 28496226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 21939886 - 21939770
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| ||||  |||||||||||||||||| | ||| ||||||||||||||||||||    
T  21939886 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcccttgagtgcctgaacatgtgtaatattgattaggaaagaatgtagg 21939787  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||| ||||||    
T  21939786 atgagattgagcctgga 21939770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 29061022 - 29060911
Alignment:
Q  26 tgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggataga 125  Q
    |||||| | |||||||||||| ||||| |||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||| |||    
T  29061022 tgatttcgacttttgagttgatccttagatgcttttgagtgcctgaacatgtccaataatgattaggaaggaatgtaggatgagattgaacctggaaaga 29060923  T
Q  126 ttgtagaatgaa 137  Q
    ||||||||||||    
T  29060922 ttgtagaatgaa 29060911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 18821463 - 18821564
Alignment:
Q  20 atttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    ||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||    
T  18821463 atttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctg 18821562  T
Q  120 ga 121  Q
    ||    
T  18821563 ga 18821564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 20594276 - 20594147
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||| |||||||  |||||||||||| ||||| ||| |||||||||||| ||||||||| |  ||||||||| |||||||||||    
T  20594276 cagagagcttgcaagatttcgtgatttttacttttgagttgatccttagatgtttttgagtgcctaaacatgtctaaatatgattagggaagaatgtagg 20594177  T
Q  105 atgagattgaacctggatagattgtagaat 134  Q
    ||||||||||||||||| ||||||||||||    
T  20594176 atgagattgaacctggaaagattgtagaat 20594147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 16920263 - 16920378
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||||||||||| |  ||||| |||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| |||||||||||||    
T  16920263 agagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattagaaaagaatgtagga 16920362  T
Q  106 tgagattgaacctgga 121  Q
    | |||||| |||||||    
T  16920363 taagattgtacctgga 16920378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 20360601 - 20360705
Alignment:
Q  17 aagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaac 116  Q
    |||||||| || ||||| ||||| |||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20360601 aagatttcgtgtttttgacttttcagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 20360700  T
Q  117 ctgga 121  Q
    |||||    
T  20360701 ctgga 20360705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 25611347 - 25611474
Alignment:
Q  11 gcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgaga 110  Q
    |||||||||||||| |||||||| |||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||  ||||| || ||||||    
T  25611347 gcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcagcatgaga 25611446  T
Q  111 ttgaacctggatagattgtagaatgaaac 139  Q
    ||| ||||||| ||| | |||||||||||    
T  25611447 ttggacctggaaagact-tagaatgaaac 25611474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 18457202 - 18457100
Alignment:
Q  20 atttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    ||||| |||||||  |||||||||||| ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||    
T  18457202 atttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 18457103  T
Q  120 gat 122  Q
    |||    
T  18457102 gat 18457100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 15894049 - 15894180
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||||||||||| |  ||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||| |||||||||  ||||||| ||    
T  15894049 agagagcatgcaagatttcgtacttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaaga 15894148  T
Q  106 tgagattgaacctggatagattgtagaatgaaa 138  Q
    |||||||| ||||||| ||| | ||||||||||    
T  15894149 tgagattggacctggaaagact-tagaatgaaa 15894180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 22334500 - 22334616
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| | | |||| |||||||||||||||||| |||| ||||||||||||||||||||| ||| |||||||||  ||||||| |    
T  22334500 cagagagcatgcaagatttcgtaaatttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaag 22334599  T
Q  105 atgagattgaacctgga 121  Q
    ||||||||| |||||||    
T  22334600 atgagattggacctgga 22334616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 19652685 - 19652566
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||| || || |||||||||||||    
T  19652685 agatttcgtaattttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagaatgagattgaacc 19652586  T
Q  118 tggatagattgtagaatgaa 137  Q
    |||| ||| | |||||||||    
T  19652585 tggaaagactttagaatgaa 19652566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 25603003 - 25603136
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||  |||||||||||||||| | | || ||||||||||||||||||||| |||||||||||||  ||||| | |    
T  25603003 cagagagcatgcaagatttcgtgattttaacttttgagttgaacctgaaacgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcatg 25603102  T
Q  105 atgagattgaacctggatagattgtagaatgaaac 139  Q
    ||||||||| ||||||| ||| | |||||||||||    
T  25603103 atgagattggacctggaaagact-tagaatgaaac 25603136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 4667831 - 4667963
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||   || ||||| |||||||| ||| ||||| ||||||||||||||||||||| |||| |||| ||||||||||||||||||     
T  4667831 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 4667930  T
Q  105 atgagattgaacctggatagattgtagaatgaa 137  Q
     |||||||| ||||||| ||| | |||||||||    
T  4667931 gtgagattggacctggaaagagtttagaatgaa 4667963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 4674678 - 4674810
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||   || ||||| |||||||| ||| ||||| ||||||||||||||||||||| |||| |||| ||||||||||||||||||     
T  4674678 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 4674777  T
Q  105 atgagattgaacctggatagattgtagaatgaa 137  Q
     |||||||| ||||||| ||| | |||||||||    
T  4674778 gtgagattggacctggaaagagtttagaatgaa 4674810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 22831994 - 22831878
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| |||||||||||||  ||||||||||| ||| |||||||  |||||| ||||    
T  22831994 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgtttgaacatgtctaatattgattagtgaagaatatagg 22831895  T
Q  105 atgagattgaacctgga 121  Q
    | |||||||||||||||    
T  22831894 acgagattgaacctgga 22831878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 4185441 - 4185573
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||   || ||||| |||||||| ||| ||||| |||||||||||||| |||||| |||| |||| ||||| ||||||||||||     
T  4185441 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcatgaacaagtctaataacgattatgaaagaatgtaga 4185540  T
Q  105 atgagattgaacctggatagattgtagaatgaa 137  Q
     |||||||||||||||| ||| | |||||||||    
T  4185541 gtgagattgaacctggaaagagtttagaatgaa 4185573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 4189459 - 4189327
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||   || ||||  |||||||| ||| ||||| ||||||||||||||||||||| |||| |||| ||||||||||||||||||     
T  4189459 cagagagcatgcaagattctgtgttttttacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 4189360  T
Q  105 atgagattgaacctggatagattgtagaatgaa 137  Q
     |||||||| ||||||| ||| | |||||||||    
T  4189359 gtgagattggacctggaaagagtttagaatgaa 4189327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 27332916 - 27333034
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||||| |||||| | ||| |||||||||||| ||||||||||||| |||||||||| | || |||||||||||||| | ||| ||||| ||||||||    
T  27332916 gatttcataattttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacct 27333015  T
Q  119 ggatagattgtagaatgaa 137  Q
    ||| ||||| |||||||||    
T  27333016 ggaaagattttagaatgaa 27333034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 27393656 - 27393774
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||||| |||||| | ||| |||||||||||| ||||||||||||| |||||||||| | || |||||||||||||| | ||| ||||| ||||||||    
T  27393656 gatttcataattttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacct 27393755  T
Q  119 ggatagattgtagaatgaa 137  Q
    ||| ||||| |||||||||    
T  27393756 ggaaagattttagaatgaa 27393774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 31155016 - 31155137
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||   |  ||||| |||||||| ||| ||||| ||||||||||||||||||| | |||| |||| |||| |||||||||||||     
T  31155016 cagagagcatgcaagattctgtttttttgacttttgagatgacccttagatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtaga 31155115  T
Q  105 atgagattgaacctggatagat 126  Q
    ||||||||||||||||| ||||    
T  31155116 atgagattgaacctggaaagat 31155137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 11185994 - 11185878
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||| |||||||| |   ||||  ||||||||||||||||| |||| ||||||||||||||||||||  ||| |||||||  |||| ||||||    
T  11185994 cagagagcatgtaagatttcgtatatttgatttttgagttgaaccttagatgcctttgagtgcctgaacatgtcgaatattgattagtgaagagtgtagg 11185895  T
Q  105 atgagattgaacctgga 121  Q
    | |||||||||||||||    
T  11185894 acgagattgaacctgga 11185878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 23019874 - 23019794
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||||||||| |||||||||||||||||||||||| | ||||||||||||||||| | |||  ||||||||||||||||    
T  23019874 agttgaaccttagatgcttttgagtgcctgaacatgtgtgataatgattaggaaagattttagattgagattgaacctgga 23019794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 25628983 - 25629102
Alignment:
Q  15 gcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattga 114  Q
    ||||||||||||||||||| ||||| |||||||||||| ||| | || || |||| ||||| |||  |||||||||||||| | ||||| ||||||||||    
T  25628983 gcaagatttcatgattttgactttttagttgaaccttagatgttgttaagcgcctaaacatctctattaatgattaggaaatattgtagaatgagattga 25629082  T
Q  115 acctggatagattgtagaat 134  Q
    ||||||| | ||| ||||||    
T  25629083 acctggaaatattttagaat 25629102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 22439302 - 22439230
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgt 77  Q
    |||||||||||||||||||  | |||||| |||||||||||||||||| ||| ||||||||||||||| ||||    
T  22439302 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgt 22439230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 27415572 - 27415632
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagt 65  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| |||  |||||||    
T  27415572 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtctttgagt 27415632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 31164473 - 31164589
Alignment:
Q  2 gagcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgt 101  Q
    ||||||||||||||||||||||    |||||| | ||||||||||  |||  |||   ||||||||||||||||  ||  ||||||||||||| ||||||    
T  31164473 gagcagagagcatgcaagattttgcaattttgacatttgagttgatacttggatgtccttgagtgcctgaacatacctagtaatgattaggaatgaatgt 31164572  T
Q  102 aggatgagattgaacct 118  Q
    |||||||||||| ||||    
T  31164573 aggatgagattggacct 31164589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 19863480 - 19863413
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    ||||||||||| |||||||| |  ||||| |||||||||||||||||| ||| |||||||||||||||    
T  19863480 cagagagcatgtaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 19863413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 22080391 - 22080447
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaaga 97  Q
    |||||||||||| ||| ||||||||| |||||||||||| ||||||||||| |||||    
T  22080391 agttgaaccttagatgtttttgagtgactgaacatgtctaataatgattagaaaaga 22080447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 22432752 - 22432680
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgt 77  Q
    |||||||||||||||||||  |  ||||| |||||||||||||||||| ||| |||||||||| |||| ||||    
T  22432752 cagagagcatgcaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcatgaagatgt 22432680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 22331917 - 22331803
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||    |||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  22331917 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 22331818  T
Q  104 gatgagattgaacct 118  Q
    ||  |||||||||||    
T  22331817 gacaagattgaacct 22331803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 18180974 - 18180925
Alignment:
Q  20 atttcatgattttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||| |||||||||||||||||| ||| ||||||||||||    
T  18180974 atttcgtgattttgacttttgagttgaaccttagatgtttttgagtgcct 18180925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 21834533 - 21834573
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  21834533 ttttgacttttgagttgaaccttagatgcttttgagtgcct 21834573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 25641802 - 25641874
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgt 77  Q
    ||||||||||| |||||||  |  ||| | |||||||||||||||||| ||| ||||||||||||||| ||||    
T  25641802 cagagagcatgtaagattttgtagtttggacttttgagttgaaccttagatgtttttgagtgcctgaagatgt 25641874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 1538628 - 1538686
Alignment:
Q  59 tttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  1538628 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 1538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 1544727 - 1544785
Alignment:
Q  59 tttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  1544727 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 1544785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 25956253 - 25956355
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||| | |||||| ||||| ||||||| |||| ||  |||||||||||||||||||||| || | |||| | ||||| | |||  ||||||| |||||    
T  25956253 gatttcgtaattttgacttttaagttgaatcttagatatttttgagtgcctgaacatgtctaattacgattggaaaagattctagattgagatttaacct 25956352  T
Q  119 gga 121  Q
    |||    
T  25956353 gga 25956355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 16372280 - 16372223
Alignment:
Q  60 ttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||||||||||||||| |||  ||||||||||| | ||||||||||  ||||||||||    
T  16372280 ttgagtgcctgaacatatctagtaatgattagggatgaatgtaggacaagattgaacc 16372223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 16523045 - 16523086
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||||| ||||    
T  16523045 attttgacttttgagttgaaccttagatgcttttgagcgcct 16523086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 20109682 - 20109605
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||||| ||| ||| || ||||||||||||||||| | |||||||||||| |||  | |||  |||||||||||||    
T  20109682 agttgaactttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacct 20109605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 27327722 - 27327787
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggat 106  Q
    ||||| ||||| ||||| |||||||||||||||||  ||  || |||||||||| |||||||||||    
T  27327722 agttggaccttgtatgcctttgagtgcctgaacatacctagtattgattaggaatgaatgtaggat 27327787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 27388462 - 27388527
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggat 106  Q
    ||||| ||||| ||||| |||||||||||||||||  ||  || |||||||||| |||||||||||    
T  27388462 agttggaccttgtatgcctttgagtgcctgaacatacctagtattgattaggaatgaatgtaggat 27388527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 1645157 - 1645121
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagt 65  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  1645157 ttttgacttttgagttgaaccttatatgcctttgagt 1645121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 14059283 - 14059347
Alignment:
Q  42 gttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggat 106  Q
    |||||||||| ||| | |||||||||| ||||||| ||  || |||||||||| |||||||||||    
T  14059283 gttgaaccttgtatacctttgagtgcccgaacatgcctagtattgattaggaatgaatgtaggat 14059347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 14099104 - 14099004
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    ||||||||||||  ||||||  || ||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  14099104 gcagagagcatgttagattttgtgttttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 14099005  T
Q  104 g 104  Q
    |    
T  14099004 g 14099004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 21739665 - 21739705
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  21739665 ttttgacttttgagttgaaccttagatgtttttgagtgcct 21739705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 22429684 - 22429724
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| |||||| |||||||||    
T  22429684 ttttgacttttgagttgaaccttagatgcttctgagtgcct 22429724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 25644811 - 25644711
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||| | |||||| | ||| |||||||||||| ||| |||||||||||||  ||||| | |   ||||||||||||| | |||  |||||||||||||    
T  25644811 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgttcatgtataacgttgattaggaaagattttagattgagattgaacct 25644712  T
Q  119 g 119  Q
    |    
T  25644711 g 25644711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 65
Target Start/End: Original strand, 27567271 - 27567299
Alignment:
Q  37 tttgagttgaaccttatatgcttttgagt 65  Q
    |||||||||||||||||||||||||||||    
T  27567271 tttgagttgaaccttatatgcttttgagt 27567299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 2e-57; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 22354190 - 22354326
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||    
T  22354190 cagagagcatgcaagattttgtgattttgacttttgagttgaaccttatatgcttttgagtgcttgaacatgtcttataatgattaggaaataacgtagg 22354289  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||||||||||||||||||||||||||||||||    
T  22354290 atgagattgaacctggatagattgtagaatgaaactt 22354326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 22532772 - 22532640
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| ||||||| |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22532772 cagagagcatgcaagatttcgtgattttgacttttgatttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22532673  T
Q  105 atgagattgaacctggatagattgtagaatgaa 137  Q
    |||||||||||||||||  ||||||||||||||    
T  22532672 atgagattgaacctggaaggattgtagaatgaa 22532640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 34510283 - 34510151
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||| |||||||| ||||||||||||  |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34510283 cagagagcttgcaagatttcgtgattttgacttttgagttgattcttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 34510184  T
Q  105 atgagattgaacctggatagattgtagaatgaa 137  Q
    ||||||||||||||||| |||||||||||||||    
T  34510183 atgagattgaacctggaaagattgtagaatgaa 34510151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 22355803 - 22355919
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||| ||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22355803 cagagaacatgcaagatttcataattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22355902  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  22355903 atgagattgaacctgga 22355919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 22357489 - 22357605
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||| ||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22357489 cagagaacatgcaagatttcataattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22357588  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  22357589 atgagattgaacctgga 22357605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 27250358 - 27250474
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| | || ||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27250358 cagagagcatgcaagatttcgtaatattgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 27250457  T
Q  105 atgagattgaacctgga 121  Q
    ||| |||||||||||||    
T  27250458 atgggattgaacctgga 27250474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 50209832 - 50209966
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  |||||||| |||||||||||| | |||||||| ||||||||||||||||||||| |||||||||||||||||||||||     
T  50209832 cagagagcatgcaagattttgtgattttgacttttgagttgatc-ttatatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 50209930  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  50209931 atgagattgaacctggaaagatt-tagaatgaaactt 50209966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 433509 - 433374
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||| ||||||||| | |||||||| |||||||||||| ||||| ||||||||||||| ||||||||||||  |||||||||||||||||||||| |    
T  433509 agagagcttgcaagattccgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctattaatgattaggaaagaatgtagaa 433410  T
Q  106 tgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||||||||||| ||||| |||||||||||||    
T  433409 tgagattgaacctggaaagattttagaatgaaactt 433374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 20919104 - 20918990
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||| || |||||| | |||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||     
T  20919104 cagagagcatgcaagattttataattttgacctttgagttgatccttacatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 20919005  T
Q  105 atgagattgaacctg 119  Q
    |||||||||||||||    
T  20919004 atgagattgaacctg 20918990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 20846848 - 20846964
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  | |||||| | |||||||||| ||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  20846848 cagagagcatgcaagattttgtaattttgacctttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtagg 20846947  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  20846948 atgagattgaacctgga 20846964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 38801020 - 38801136
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||||||  ||||| |||||||||||||| ||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||    
T  38801020 cagagagcatgcaagatttcatatttttgacttttgagttgaactttagatgtctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 38801119  T
Q  105 atgagattgaacctgga 121  Q
    ||| |||||||||||||    
T  38801120 atgtgattgaacctgga 38801136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 20135690 - 20135557
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||| ||||  | |||||| |||||||||| | ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  20135690 cagagagcatgcaatattttgtaattttgacttttgagtttatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagg 20135591  T
Q  105 atgagattgaacctggatagattgtagaatgaaac 139  Q
    ||||||||| ||||||| ||| | |||||||||||    
T  20135590 atgagattggacctggaaagact-tagaatgaaac 20135557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 21027172 - 21027056
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||| ||  | |||||| | |||||||||| ||||| |||||||||||||| ||||||||||| |||||||||||| |||||||||||    
T  21027172 cagagagcatgcaagaatttgtaattttgacctttgagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggtaagaatgtagg 21027073  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  21027072 atgagattgaacctgga 21027056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 21301157 - 21301245
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaa 94  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  21301157 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 21301245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 33681499 - 33681380
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| |||||||||||| ||||| ||| |||||||| |||||| |||||| ||||||||||||||||| || || |||||||||||||    
T  33681499 agatttcgtaattttgacttttgagttgatccttagatgtttttgagttcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacc 33681400  T
Q  118 tggatagattgtagaatgaa 137  Q
    |||| ||||| |||||||||    
T  33681399 tggaaagattttagaatgaa 33681380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 52927612 - 52927731
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| |||||||||||| ||||| ||| |||||||||||||||||||||| |||||||||| |||||| || || |||||||||||||    
T  52927612 agatttcgtaattttgacttttgagttgacccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagattggagaatgagattgaacc 52927711  T
Q  118 tggatagattgtagaatgaa 137  Q
    |||| ||||| | |||||||    
T  52927712 tggaaagattttggaatgaa 52927731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 20091092 - 20091206
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| |||||||||| ||||||| |||| ||||| ||||||||||||||| ||| |||||||||  ||||||| |    
T  20091092 cagagagcatgcaagatttcttatttttgacttttgagttaaaccttagatgcctttgattgcctgaacatgtctaatattgattaggagtgaatgtaag 20091191  T
Q  105 atgagattgaacctg 119  Q
    ||||||||| |||||    
T  20091192 atgagattggacctg 20091206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 21162231 - 21162117
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||   || ||||| |||||||| ||| ||||| ||||||||||||||||||| | |||| |||| |||| |||||||||||||     
T  21162231 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttaaatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtaga 21162132  T
Q  105 atgagattgaacctg 119  Q
    |||||||||||||||    
T  21162131 atgagattgaacctg 21162117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 20248757 - 20248648
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagatt 127  Q
    |||||| |||||||||||| || || ||| |||||||||||||||||||||| |||||||||||||||||  | || ||||||||||||||||| ||| |    
T  20248757 attttgacttttgagttgatccatagatgtttttgagtgcctgaacatgtctaataatgattaggaaagatcggagaatgagattgaacctggagagact 20248658  T
Q  128 gtagaatgaa 137  Q
     |||||||||    
T  20248657 ttagaatgaa 20248648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 137
Target Start/End: Complemental strand, 21754514 - 21754406
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagattg 128  Q
    ||||| |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||| || || | ||||||||||||||  ||| |     
T  21754514 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaaagagattgaacctgggaagactt 21754415  T
Q  129 tagaatgaa 137  Q
    |||||||||    
T  21754414 tagaatgaa 21754406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 22921499 - 22921597
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||||| | |||||| | |||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| || ||  ||||||||||||    
T  22921499 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacc 22921597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 22238109 - 22238000
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagatt 127  Q
    |||||| |||||||||||| ||||| ||  |||||||||||||||||||||| |||||| |||||||||| || || |||||||| |||||||| |||||    
T  22238109 attttgacttttgagttgatccttagatatttttgagtgcctgaacatgtctaataatggttaggaaagattggagaatgagattaaacctggaaagatt 22238010  T
Q  128 gtagaatgaa 137  Q
     | |||||||    
T  22238009 ttggaatgaa 22238000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 43697849 - 43697747
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||| | |||||| ||||| |||||||||||| ||| ||||||||||||||||||||||  | |||||||| ||||| | |||  ||||||| |||||    
T  43697849 gatttcgtaattttgacttttaagttgaaccttagatgtttttgagtgcctgaacatgtctatttatgattagaaaagattctagattgagatttaacct 43697750  T
Q  119 gga 121  Q
    |||    
T  43697749 gga 43697747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 22468315 - 22468382
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    ||||||||||| |||||||| |  ||||| |||||||||||||||||| ||| |||||||||||||||    
T  22468315 cagagagcatgtaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 22468382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 18181764 - 18181826
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattag 91  Q
    ||||| |||||||||||||||||| |||||||||||||||| || |||| |  ||||||||||    
T  18181764 ttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaatgattag 18181826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 21438271 - 21438157
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| ||||||| |  | || | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  21438271 gcagagagcatgtaagattttacaaattagactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 21438172  T
Q  104 gatgagattgaacct 118  Q
    ||  |||||||||||    
T  21438171 gacaagattgaacct 21438157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 23763688 - 23763574
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||    |||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  23763688 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 23763589  T
Q  104 gatgagattgaacct 118  Q
    ||  |||||||||||    
T  23763588 gacaagattgaacct 23763574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 28194106 - 28194180
Alignment:
Q  45 gaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    |||||||  ||| |||||||||||||||| ||| | || |||||||||||||| |||||  ||||||||||||||    
T  28194106 gaaccttggatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctg 28194180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 120
Target Start/End: Original strand, 35981357 - 35981419
Alignment:
Q  58 ttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgg 120  Q
    |||||||||||||||| ||| | || |||||||||||||| |||||  |||||||||||||||    
T  35981357 ttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctgg 35981419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 21715036 - 21714983
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    |||||| | |||||| |||||||||||||||||| ||| |||||||||||||||    
T  21715036 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 21714983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 22432425 - 22432466
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  22432425 attttgacttttgagttgaaccttagatgcttttgagtgcct 22432466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 8761252 - 8761316
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||||||||   |||||| | |||| | |||||||||||||||||| ||||||||||||||||    
T  8761252 cagagagcatgttggatttcgtaatttggacttttgagttgaaccttagatgcttttgagtgcct 8761316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 21023115 - 21023075
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcc 68  Q
    |||||| |||||||||||||||||| |||||||||||||||    
T  21023115 attttgacttttgagttgaaccttaaatgcttttgagtgcc 21023075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 3472568 - 3472607
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgc 67  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  3472568 attttgacttttgagttgaaccttagatgcttttgagtgc 3472607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 20524899 - 20524958
Alignment:
Q  59 tttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||||||||||||||  ||  ||||||||||||| ||||||||||  |||||||||||    
T  20524899 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 20524958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 19063942 - 19063884
Alignment:
Q  59 tttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||||||||||||||||  ||  ||||||||||||| ||||||||||  ||||||||||    
T  19063942 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 19063884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 19111832 - 19111774
Alignment:
Q  59 tttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||||||||||||||||  ||  ||||||||||||| ||||||||||  ||||||||||    
T  19111832 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 19111774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 17678232 - 17678277
Alignment:
Q  20 atttcatgattttggcttttgagttgaaccttatatgcttttgagt 65  Q
    ||||||| |||| | |||||||||||||||||| ||||||||||||    
T  17678232 atttcataatttggacttttgagttgaaccttagatgcttttgagt 17678277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 167
Target Start/End: Original strand, 22354464 - 22354493
Alignment:
Q  138 acttaatgaggatgttaattataatctgtg 167  Q
    ||||||||||||||||||||||||||||||    
T  22354464 acttaatgaggatgttaattataatctgtg 22354493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 22831021 - 22831061
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  22831021 ttttgacttttgagttgaaccttagatgtttttgagtgcct 22831061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 23818953 - 23818989
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagt 65  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  23818953 ttttgacttttgagttgaaccttagatgcttttgagt 23818989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 42864854 - 42864894
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  42864854 ttttgacttttgagttgaaccttagatgtttttgagtgcct 42864894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 45489397 - 45489433
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagt 65  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  45489397 ttttgacttttgagttgaaccttagatgcttttgagt 45489433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 52415 - 52279
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52415 cagagagcatgcaagattttttgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 52316  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| |||||||||||||||||||    
T  52315 atgagattgaacctggaaagattgtagaatgaaactt 52279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 167608 - 167721
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  167608 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagg 167707  T
Q  105 atgagattgaacct 118  Q
    ||||||||||||||    
T  167708 atgagattgaacct 167721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 6e-55; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 26687390 - 26687254
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  26687390 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctaaacatgtctaataatgattaggaaagaatgtagg 26687291  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| |||||||||||||||||||    
T  26687290 atgagattgaacctggaaagattgtagaatgaaactt 26687254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 17499841 - 17499706
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    |||||| ||||||||||||||||||||| |||||||| ||| ||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  17499841 agagagaatgcaagatttcatgattttgacttttgagatgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 17499742  T
Q  106 tgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||||||||||| |||||||||||||||||||    
T  17499741 tgagattgaacctggaaagattgtagaatgaaactt 17499706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 40213339 - 40213471
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||| |||||||| |||||||||||| | ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40213339 cagagagcttgcaagatttcgtgattttgacttttgagttgatcattagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 40213438  T
Q  105 atgagattgaacctggatagattgtagaatgaa 137  Q
    ||||||||||||||||| |||||||||||||||    
T  40213439 atgagattgaacctggaaagattgtagaatgaa 40213471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 17488359 - 17488224
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||||||||||| ||| |||| |||||||| ||| ||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  17488359 agagagcatgcaagatttcgtgaatttgacttttgagatgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 17488260  T
Q  106 tgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||||||||||| |||||||||||||||||||    
T  17488259 tgagattgaacctggaaagattgtagaatgaaactt 17488224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 11424381 - 11424516
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||     
T  11424381 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaataatgtaga 11424480  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  11424481 atgagattgaacctggaaagatt-tagaatgaaactt 11424516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 12340255 - 12340120
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  12340255 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 12340156  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||| | |||||||||||||    
T  12340155 atgagattgaacctggaaagact-tagaatgaaactt 12340120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 18439037 - 18438902
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||      
T  18439037 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaaa 18438938  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  18438937 atgagattgaacctggaaagatt-tagaatgaaactt 18438902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 17247904 - 17248040
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||  ||||||||||| |||||||| |||||||||||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||     
T  17247904 cagagaggttgcaagatttcgtgattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 17248003  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  17248004 atgagattgaacctggaaagattttagaatgaaactt 17248040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 20698065 - 20698181
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  | |||||| |||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  20698065 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtagg 20698164  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  20698165 atgagattgaacctgga 20698181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 14179825 - 14179693
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||     
T  14179825 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 14179726  T
Q  105 atgagattgaacctggatagattgtagaatgaaa 138  Q
    |||||||||||| |||| ||| | ||||||||||    
T  14179725 atgagattgaacttggaaagact-tagaatgaaa 14179693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 43842681 - 43842572
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||||||||||||| ||||| |||||| ||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  43842681 cagagagcatgcaagatttcatgattttgactttttagttgatccttagatgcttttgagtgcctgagcatgtctaataatgattaggaaagaatgtagg 43842582  T
Q  105 atgagattga 114  Q
    ||||||||||    
T  43842581 atgagattga 43842572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 14666108 - 14665973
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||| |||   ||||||||||||||||| || ||| ||||||||||||||||||||    
T  14666108 cagagagcatgcaagattttatgattttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtagg 14666009  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||| | |||||||||||||    
T  14666008 atgagattgaacctggaaagact-tagaatgaaactt 14665973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 14669263 - 14669128
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| |||   |||||||||||||||||||| ||| ||| ||||||||||||||||    
T  14669263 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatgtctaatattgaataggaaagaatgtagg 14669164  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||| | |||||||||||||    
T  14669163 atgagattgaacctggaaagact-tagaatgaaactt 14669128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 14735621 - 14735486
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||| |||   ||||||||||||||||| || ||| ||||||||||||||||||||    
T  14735621 cagagagcatgcaagattttatgattttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtagg 14735522  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||| | |||||||||||||    
T  14735521 atgagattgaacctggaaagact-tagaatgaaactt 14735486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 25476003 - 25476139
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  |||||||| |||||||||||| ||||| ||| |||||||| ||||||||||||| |||||||||| ||||||||||||     
T  25476003 cagagagcatgcaagattttgtgattttgacttttgagttgatccttagatgtttttgagtacctgaacatgtctaataatgattatgaaagaatgtaga 25476102  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||| ||||||||| ||||| |||||||||||||    
T  25476103 atgagatcgaacctggaaagattttagaatgaaactt 25476139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 53070321 - 53070434
Alignment:
Q  9 gagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatga 108  Q
    |||| ||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||| ||||    
T  53070321 gagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatga 53070420  T
Q  109 gattgaacctggat 122  Q
    ||||||||||||||    
T  53070421 gattgaacctggat 53070434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 14973357 - 14973245
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||     
T  14973357 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 14973258  T
Q  105 atgagattgaacc 117  Q
    |||||||| ||||    
T  14973257 atgagattaaacc 14973245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 14573088 - 14572958
Alignment:
Q  8 agagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatg 107  Q
    ||||||||||||||||  || ||||| |||||||||||| ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  14573088 agagcatgcaagattttgtgtttttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatg 14572989  T
Q  108 agattgaacctggatagattgtagaatgaaac 139  Q
    |||||||||||||| ||| | |||||||||||    
T  14572988 agattgaacctggaaagact-tagaatgaaac 14572958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 12851984 - 12852117
Alignment:
Q  7 gagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggat 106  Q
    |||||||||||||||||| |||||||| |||||||||| ||| ||| ||||  |||||||||||||||||||| ||| ||||||||||||||||||||||    
T  12851984 gagagcatgcaagatttcgtgattttgacttttgagtttaactttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggat 12852083  T
Q  107 gagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||| ||||| ||| | |||||||||||||    
T  12852084 gagattgaatctggaaagact-tagaatgaaactt 12852117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 14576451 - 14576584
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||| |||| ||||||||||||||||||||| || |||||||| |||||||||||     
T  14576451 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaattatgattagaaaagaatgtaga 14576550  T
Q  105 atgagattgaacctggatagattgtagaatgaaac 139  Q
    |||| |||||||||||| ||| | |||||||||||    
T  14576551 atgacattgaacctggaaagact-tagaatgaaac 14576584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 30030331 - 30030215
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| | | |||| |||||||||||||||||| |||| |||||||| |||||||||||| |||||||||| |||||||||| ||    
T  30030331 cagagagcatgcaagatttcgtaaatttgacttttgagttgaaccttagatgcctttgagtgtctgaacatgtctaataatgattacgaaagaatgtggg 30030232  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  30030231 atgagattgaacctgga 30030215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 13209946 - 13210077
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| |||||||||||||||| ||||||||| || ||||||||||||||| ||||     
T  13209946 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaacatgtctaat-atgattaggaaagaaagtaga 13210044  T
Q  105 atgagattgaacctggatagattgtagaatgaaa 138  Q
    ||||||||||||||||| ||| | ||||||||||    
T  13210045 atgagattgaacctggaaagact-tagaatgaaa 13210077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 141
Target Start/End: Original strand, 4588457 - 4588568
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagattg 128  Q
    ||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| | ||| |     
T  4588457 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctgtaaagact- 4588555  T
Q  129 tagaatgaaactt 141  Q
    |||||||||||||    
T  4588556 tagaatgaaactt 4588568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 12399698 - 12399582
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||| ||||||  | |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  12399698 cagagagcatgctagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatatagg 12399599  T
Q  105 atgagattgaacctgga 121  Q
    ||| | |||||||||||    
T  12399598 atgggtttgaacctgga 12399582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 57 - 141
Target Start/End: Complemental strand, 13442725 - 13442641
Alignment:
Q  57 cttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  13442725 cttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtagaatgaaactt 13442641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 23082979 - 23083114
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||  ||||||  |||||||| |||||||||||| ||||| ||||||||||||||||| | |||||| ||| ||||||||| | ||||||||    
T  23082979 cagagagcatgtcagattttgtgattttgacttttgagttgatccttagatgcttttgagtgcctggatatgtctaatagtgattaggacaaaatgtagg 23083078  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||| ||||||| ||||| |||||||||||||    
T  23083079 atgagattggacctggaaagatt-tagaatgaaactt 23083114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 49389275 - 49389394
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||| || || |||||||||||||    
T  49389275 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 49389374  T
Q  118 tggatagattgtagaatgaa 137  Q
    |||| ||| | |||||||||    
T  49389375 tggagagactttagaatgaa 49389394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 12933952 - 12934061
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagattg 128  Q
    ||||| |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||| |  || ||||||||||||||||| |||||     
T  12933952 ttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattt 12934051  T
Q  129 tagaatgaaa 138  Q
    ||||||||||    
T  12934052 tagaatgaaa 12934061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 9513383 - 9513280
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagattgtagaat 134  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |  || ||||||||||||||| | ||||| ||||||    
T  9513383 cttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaat 9513284  T
Q  135 gaaa 138  Q
    ||||    
T  9513283 gaaa 9513280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 9521358 - 9521255
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagattgtagaat 134  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |  || ||||||||||||||| | ||||| ||||||    
T  9521358 cttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaat 9521259  T
Q  135 gaaa 138  Q
    ||||    
T  9521258 gaaa 9521255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 16809887 - 16809776
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||| ||||||| |  ||||| |||||||||||||||||| |||||||||||||| |||||||     |||||||||||||||||||||||||    
T  16809887 agagagcatgctagatttcgtatttttgacttttgagttgaaccttaaatgcttttgagtgcttgaacata----ataatgattaggaaagaatgtagga 16809792  T
Q  106 tgagattgaacctgga 121  Q
    ||||||||| ||||||    
T  16809791 tgagattgatcctgga 16809776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 17247142 - 17247236
Alignment:
Q  9 gagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||| ||||||||||| |||||||| |||||||||||| ||||| ||| ||||||||||| |||||||||| |||||||||||||||||||||||    
T  17247142 gagcttgcaagatttcgtgattttgacttttgagttgatccttagatgtttttgagtgccggaacatgtctaataatgattaggaaagaatgtag 17247236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 32308158 - 32308058
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| |||||||||||| ||||| |||||||||||||||||||||| ||| ||||||||||||||||| || || |||||||||||||    
T  32308158 agatttcgtaattttgacttttgagttgatccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagattggagaatgagattgaacc 32308059  T
Q  118 t 118  Q
    |    
T  32308058 t 32308058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 16097820 - 16097701
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| |||||||||||| ||||| ||| ||||||||| |||||||||||| ||||| ||||||||||| || || |||||||||||||    
T  16097820 agatttcgtaattttgacttttgagttgatccttaaatgtttttgagtgtctgaacatgtctaataattattaggaaagattggagaatgagattgaacc 16097721  T
Q  118 tggatagattgtagaatgaa 137  Q
    || | ||||| |||||||||    
T  16097720 tgaaaagattttagaatgaa 16097701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 49667726 - 49667834
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagattg 128  Q
    ||||| |||||||||||| ||||| ||| ||||||| |||||||||||||| ||||||||||||||||| |  || ||||||||||||||||| |||||     
T  49667726 ttttgacttttgagttgatccttagatg-ttttgagcgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaaagattt 49667824  T
Q  129 tagaatgaaa 138  Q
    ||||||||||    
T  49667825 tagaatgaaa 49667834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 1644314 - 1644415
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| |||||||||||| ||||  ||| |||||||||||||||||||||| ||||||||||||||||| |  || |||||||||||||    
T  1644314 agatttcgtaattttgacttttgagttgatccttggatgtttttgagtgcctgaacatgtctgataatgattaggaaagattagagaatgagattgaacc 1644413  T
Q  118 tg 119  Q
    ||    
T  1644414 tg 1644415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 16104260 - 16104168
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgg 120  Q
    |||||| |||||||||||| ||||| ||| || ||||||||||||||||||| ||||||||||||||||| || || ||||| ||||||||||    
T  16104260 attttgacttttgagttgatccttagatgtttctgagtgcctgaacatgtctaataatgattaggaaagattggagaatgaggttgaacctgg 16104168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 12171758 - 12171827
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaaga 97  Q
    |||||| ||||| |||||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  12171758 attttgactttttagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 12171827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 324702 - 324627
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaac 116  Q
    |||||||| ||| ||| ||||||||||||||| |||| | ||||||||||||||||| ||||| ||||||||||||    
T  324702 agttgaactttagatgattttgagtgcctgaatatgtataataatgattaggaaagattgtagaatgagattgaac 324627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 15877447 - 15877514
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| ||| |||||||||||||||    
T  15877447 cagagagcatgcaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 15877514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 14234979 - 14234881
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||||||| |||||| | ||| |||||||||||| ||  |||||||||||||||||||| | || |||||||||||||| | |||  ||||||||||||    
T  14234979 gatttcataattttgacctttaagttgaaccttagatttttttgagtgcctgaacatgtataatgatgattaggaaagattatagattgagattgaacc 14234881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 15471413 - 15471311
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||| | |||||| | |||||||||||||||| ||| |||||||| ||||||||||| | || |||||||||||||| || ||  | |||||||||||    
T  15471413 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtccctgaacatgtataatgatgattaggaaagattggagattaagattgaacct 15471314  T
Q  119 gga 121  Q
    |||    
T  15471313 gga 15471311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 2050855 - 2050931
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||||||||||| ||| |||||||||||| ||||||| | ||||||||||||||||| | |||  ||||||||||||    
T  2050855 agttgaaccttagatgtttttgagtgcctcaacatgtgtaataatgattaggaaagattctagattgagattgaacc 2050931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 1465067 - 1465143
Alignment:
Q  45 gaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||||| ||| |||||||||||||||| ||| | || ||||||| |||||| |||||  ||||||||||||||||    
T  1465067 gaaccttagatgtttttgagtgcctgaacttgtatgatgatgattatgaaagattgtagattgagattgaacctgga 1465143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 839723 - 839609
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||    |||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  839723 gcagagagcatgtaagattttgcaatttcgacttttaagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 839624  T
Q  104 gatgagattgaacct 118  Q
    ||  |||||||||||    
T  839623 gacaagattgaacct 839609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 22109929 - 22110007
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    |||||||| ||| ||| |||||||||||||||||||| | |||||||||||| |||  | |||  ||||||||||||||    
T  22109929 agttgaactttagatgtttttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctg 22110007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 24188254 - 24188140
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||    |||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  24188254 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 24188155  T
Q  104 gatgagattgaacct 118  Q
    ||  |||||||||||    
T  24188154 gacaagattgaacct 24188140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 55149455 - 55149341
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||    |||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  55149455 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 55149356  T
Q  104 gatgagattgaacct 118  Q
    ||  |||||||||||    
T  55149355 gacaagattgaacct 55149341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 3402608 - 3402649
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  3402608 attttgacttttgagttgaaccttagatgcttttgagtgcct 3402649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 12496731 - 12496690
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  12496731 attttgacttttgagttgaaccttagatgcttttgagtgcct 12496690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 15060768 - 15060727
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  15060768 attttgacttttgagttgaaccttagatgcttttgagtgcct 15060727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 17674217 - 17674258
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  17674217 attttgacttttgagttgaaccttagatgcttttgagtgcct 17674258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 18383559 - 18383600
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  18383559 attttgacttttgagttgaaccttagatgcttttgagtgcct 18383600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 3389600 - 3389640
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  3389600 ttttgacttttgagttgaaccttagatgcttttgagtgcct 3389640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 11298172 - 11298212
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  11298172 ttttgacttttgagttgaaccttagatgcttttgagtgcct 11298212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 14878148 - 14878188
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  14878148 ttttgacttttgagttgaaccttatatgtttttgagtgcct 14878188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 26190652 - 26190692
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  26190652 ttttgacttttgagttgaaccttagatgcttttgagtgcct 26190692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 323065 - 323026
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgc 67  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  323065 attttgacttttgagttgaaccttagatgcttttgagtgc 323026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 14501666 - 14501615
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattagg 92  Q
    |||||||||||| ||| ||||||||||||||| |||| | ||||||||||||    
T  14501666 agttgaaccttagatgattttgagtgcctgaatatgtataataatgattagg 14501615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 23275208 - 23275133
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaac 116  Q
    |||||||||||| ||| ||||||||||||||| |||| | |||||||||||| |||  | |||  |||||||||||    
T  23275208 agttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaac 23275133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 52523398 - 52523461
Alignment:
Q  58 ttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||||||||||||||||| | ||||| ||||||||||| | |||  ||| ||||||||||||    
T  52523398 ttttgagtgcctgaacatgtgtaataattattaggaaagattctagtttgatattgaacctgga 52523461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 69
Target Start/End: Complemental strand, 15051985 - 15051951
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||||||||||||||| ||||||||||||||||    
T  15051985 cttttgagttgaaccttagatgcttttgagtgcct 15051951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 23704428 - 23704510
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||| ||||| |||||  |||| || ||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  23704428 ctttttagttggaccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23704510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 23722884 - 23722966
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||| ||||| |||||  |||| || ||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  23722884 ctttttagttggaccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23722966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 23741340 - 23741422
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||| ||||| |||||  |||| || ||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  23741340 ctttttagttggaccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23741422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 41201457 - 41201539
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||| ||||| |||||  |||| || ||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  41201457 ctttttagttggaccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 41201539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 19725554 - 19725595
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||| ||||||    
T  19725554 attttgacttttgagttgaaccttaaatgcttttgtgtgcct 19725595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 167
Target Start/End: Complemental strand, 26687116 - 26687087
Alignment:
Q  138 acttaatgaggatgttaattataatctgtg 167  Q
    ||||||||||||||||||||||||||||||    
T  26687116 acttaatgaggatgttaattataatctgtg 26687087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 53380017 - 53380082
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggat 106  Q
    ||||||| ||| ||||| |||||||||||||||||  ||  || |||||||||| |||||||||||    
T  53380017 agttgaatcttgtatgcctttgagtgcctgaacatacctagtattgattaggaatgaatgtaggat 53380082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 53386669 - 53386734
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggat 106  Q
    ||||||| ||| ||||| |||||||||||||||||  ||  || |||||||||| |||||||||||    
T  53386669 agttgaatcttgtatgcctttgagtgcctgaacatacctagtattgattaggaatgaatgtaggat 53386734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 321657 - 321697
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  321657 ttttgacttttgagttgaaccttagatgtttttgagtgcct 321697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 605945 - 606025
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||||||||| ||| |||||||||||||||  ||| | |||||||||||| ||   | |||  ||||||||||||||||    
T  605945 agttgaaccttagatgattttgagtgcctgaatgtgtataataatgattaggcaattttctagattgagattgaacctgga 606025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 856611 - 856571
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| ||||| |||||||||||| ||||||||||||||||    
T  856611 ttttgactttttagttgaaccttagatgcttttgagtgcct 856571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 4291249 - 4291149
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    ||||||||||||  ||||||  || ||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  4291249 gcagagagcatgttagattttgtgttttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 4291150  T
Q  104 g 104  Q
    |    
T  4291149 g 4291149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 12173261 - 12173221
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  12173261 ttttgacttttgagttgaaccttagatgtttttgagtgcct 12173221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 17524817 - 17524857
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  17524817 ttttgacttttgagttgaaccttagatgtttttgagtgcct 17524857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 23077121 - 23077161
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||  ||||||||||||||||    
T  23077121 ttttgacttttgagttgaaccttggatgcttttgagtgcct 23077161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 23408928 - 23408884
Alignment:
Q  8 agagcatgcaagatttcatgattttggcttttgagttgaacctta 52  Q
    ||||||||||||| ||| | |||||| ||||||||||||||||||    
T  23408928 agagcatgcaagaattcgtaattttgacttttgagttgaacctta 23408884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 108; Significance: 2e-54; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 2353 - 2218
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||| ||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2353 agagagcatccaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 2254  T
Q  106 tgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||||||||||| |||||||||||||||||||    
T  2253 tgagattgaacctggaaagattgtagaatgaaactt 2218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 141
Target Start/End: Original strand, 207161 - 207272
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagattg 128  Q
    ||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||| ||| |     
T  207161 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagagaatgtaggatgagattgaacctggaaagact- 207259  T
Q  129 tagaatgaaactt 141  Q
    |||||||||||||    
T  207260 tagaatgaaactt 207272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 167
Target Start/End: Complemental strand, 2080 - 2051
Alignment:
Q  138 acttaatgaggatgttaattataatctgtg 167  Q
    ||||||||||||||||||||||||||||||    
T  2080 acttaatgaggatgttaattataatctgtg 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 2e-54; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 6 - 141
Target Start/End: Original strand, 23390115 - 23390250
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||| ||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23390115 agagagcatccaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 23390214  T
Q  106 tgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||||||||||| |||||||||||||||||||    
T  23390215 tgagattgaacctggaaagattgtagaatgaaactt 23390250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 1096970 - 1096838
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1096970 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 1096871  T
Q  105 atgagattgaacctggatagattgtagaatgaa 137  Q
    ||||||||||| ||||| |||||| ||||||||    
T  1096870 atgagattgaatctggaaagattgcagaatgaa 1096838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 24529724 - 24529588
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  24529724 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttcagtgcctgaacatgtctaataatgattaggaaagaatgtagg 24529625  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| || ||||||||||||||||    
T  24529624 atgagattgaacctggaaaggttgtagaatgaaactt 24529588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 21985765 - 21985900
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||     
T  21985765 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 21985864  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  21985865 atgagattgaacctggaaagatt-tagaatgaaactt 21985900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 24494071 - 24493936
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||| ||||||||||  |||||||||||||| ||||||||||||||||||||||||    
T  24494071 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttaaatgcttttgaacgcctgaacatgtctaataatgattaggaaagaatgtagg 24493972  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  24493971 atgagattgaacctggaaagatt-tagaatgaaactt 24493936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 9078455 - 9078322
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||| |||||||     
T  9078455 cagagagcatgcaagatttcgtgattttgacttttgagttgatctttatatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaga 9078356  T
Q  105 atgagattgaacctggatagattgtagaatgaaac 139  Q
    ||||||||||||||||| ||||| |||||||||||    
T  9078355 atgagattgaacctggaaagatt-tagaatgaaac 9078322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 13095996 - 13095862
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||||| ||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  13095996 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgaaagcctgaacatgtctaataatgattaggaaagaatgtagga 13095897  T
Q  106 tgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||| ||||||| ||||| |||||||||||||    
T  13095896 tgagattggacctggaaagatt-tagaatgaaactt 13095862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 21871190 - 21871311
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||| |  |||||||||||||||| |||||||    
T  21871190 agagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtagga 21871289  T
Q  106 tgagattgaacctggatagatt 127  Q
    |||||||||||||||| |||||    
T  21871290 tgagattgaacctggaaagatt 21871311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 6 - 127
Target Start/End: Original strand, 21875470 - 21875591
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||| |  |||||||||||||||| |||||||    
T  21875470 agagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtagga 21875569  T
Q  106 tgagattgaacctggatagatt 127  Q
    |||||||||||||||| |||||    
T  21875570 tgagattgaacctggaaagatt 21875591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 22075511 - 22075395
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  22075511 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtagg 22075412  T
Q  105 atgagattgaacctgga 121  Q
    |||| | ||||||||||    
T  22075411 atgaaaatgaacctgga 22075395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 22119811 - 22119946
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||| ||||  |||||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  22119811 cagagagcatgcaaaattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 22119910  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||| | |||||||||||||    
T  22119911 atgagattgaacctggaaagact-tagaatgaaactt 22119946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 25422035 - 25421900
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||  ||||    
T  25422035 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctattaatgattaggaaagaacttagg 25421936  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||| ||||||| ||||| |||||||||||||    
T  25421935 atgagattggacctggaaagatt-tagaatgaaactt 25421900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 8286471 - 8286587
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| || ||||| |||||||||||||||||| |||| |||||||||| |||||||||| |||||||||| |||||||||||||    
T  8286471 cagagagcatgcaagatttcgtgtttttgacttttgagttgaaccttagatgcatttgagtgccggaacatgtctaataatgattaagaaagaatgtagg 8286570  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  8286571 atgagattgaacctgga 8286587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 24766955 - 24767090
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||| |||||||||||||||||||||| | |||||||||||||||||| |||| ||||||||||||||||||||| ||| |||||| |||||||||||||    
T  24766955 cagatagcatgcaagatttcatgatttcgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtagg 24767054  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||| ||||| ||| | |||||||||||||    
T  24767055 atgagattgaatctggaaagact-tagaatgaaactt 24767090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 25431897 - 25431762
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||| |  |||||||||||||||||| ||||    
T  25431897 cagagagcgtgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagaatttagg 25431798  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||| ||||||| ||||| |||||||||||||    
T  25431797 atgagattggacctggaaagatt-tagaatgaaactt 25431762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 13025812 - 13025678
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||||||||||| ||||||||  ||||||||||| ||||| || |||||||  |||||||||||||| |||||||||||||||||||||||||    
T  13025812 agagagcatgcaagatttcgtgattttgaattttgagttgatccttagatacttttgaaagcctgaacatgtctaataatgattaggaaagaatgtagga 13025713  T
Q  106 tgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||| ||||||| ||||| |||||||||||||    
T  13025712 tgagattggacctggaaagatt-tagaatgaaactt 13025678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 11580878 - 11580999
Alignment:
Q  20 atttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    ||||| |||||||| |||||||||||| ||||| | |||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||    
T  11580878 atttcgtgattttgacttttgagttgatccttagaagcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 11580977  T
Q  120 gatagattgtagaatgaaactt 141  Q
    |||||||| |||||| ||||||    
T  11580978 gatagattttagaataaaactt 11580999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 36154461 - 36154582
Alignment:
Q  20 atttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    |||||||||||||| ||||| |||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||  ||||||||||||||    
T  36154461 atttcatgattttgacttttaagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagagtgagattgaacctg 36154560  T
Q  120 gatagattgtagaatgaaactt 141  Q
    |||||||| |||||| ||||||    
T  36154561 gatagattttagaataaaactt 36154582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 19660455 - 19660587
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  |  ||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |     
T  19660455 cagagagcatgcaagattttgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtgga 19660554  T
Q  105 atgagattgaacctggatagattgtagaatgaaa 138  Q
    |||||||| |||||||| ||| | ||||||||||    
T  19660555 atgagattaaacctggaaagact-tagaatgaaa 19660587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 21292623 - 21292715
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  21292623 ttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattgaacctgga 21292715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 21566034 - 21565915
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||| || || |||||||||||||    
T  21566034 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 21565935  T
Q  118 tggatagattgtagaatgaa 137  Q
    |||| ||||| |||||||||    
T  21565934 tggaaagattttagaatgaa 21565915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 22107002 - 22107116
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||| ||||| |  ||||| |||||||||||||| ||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  22107002 cagagagcatgcaaaatttcgtatttttgacttttgagttgaactttagatgcgtttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 22107101  T
Q  105 atgagattgaacctg 119  Q
    | |||||||||||||    
T  22107102 acgagattgaacctg 22107116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 22959174 - 22959283
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagatt 127  Q
    |||||| |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||| ||| |    
T  22959174 attttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagact 22959273  T
Q  128 gtagaatgaa 137  Q
     |||||||||    
T  22959274 ttagaatgaa 22959283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 19669390 - 19669271
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| |||||||||||| ||||| ||| ||||||||| |||||||||||| ||||||||||||||||| ||  | ||||||||||||     
T  19669390 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgtctgaacatgtctaataatgattaggaaagattggggaatgagattgaacg 19669291  T
Q  118 tggatagattgtagaatgaa 137  Q
    |||| ||| | |||||||||    
T  19669290 tggaaagactttagaatgaa 19669271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 21329127 - 21329229
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||| | |||||| | ||| |||||||||||| ||| ||||||||||||||||||||||  | |||||||| ||||| | |||  |||||||||||||    
T  21329127 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacct 21329226  T
Q  119 gga 121  Q
    |||    
T  21329227 gga 21329229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 121
Target Start/End: Original strand, 21498658 - 21498751
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||| | ||| |||||||||||  ||| |||||||||||||||||||| | ||||| ||||||| ||| |||||  ||||||||||||||||    
T  21498658 attttgacctttaagttgaaccttggatgtttttgagtgcctgaacatgtataataattattaggagagattgtagattgagattgaacctgga 21498751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 20910430 - 20910490
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagt 65  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| |||  |||||||    
T  20910430 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtctttgagt 20910490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 20806024 - 20805983
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  20806024 attttgacttttgagttgaaccttatatgcttttgagtgcct 20805983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 121
Target Start/End: Complemental strand, 22144500 - 22144437
Alignment:
Q  58 ttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||||||||||||||||| | | ||||||||||||||| | |||  ||||||||||||||||    
T  22144500 ttttgagtgcctgaacatgtgtaacaatgattaggaaagattctagattgagattgaacctgga 22144437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 21294892 - 21295006
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||    |||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  21294892 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 21294991  T
Q  104 gatgagattgaacct 118  Q
    ||  |||||||||||    
T  21294992 gacaagattgaacct 21295006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 37724403 - 37724337
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    |||||||||| ||||||   | |||||| |||||||||||||||||| ||| |||||||||||||||    
T  37724403 agagagcatgtaagattctgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 37724337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 15441583 - 15441696
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||    |||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  15441583 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 15441682  T
Q  104 gatgagattgaacc 117  Q
    ||  ||||||||||    
T  15441683 gacaagattgaacc 15441696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 17918804 - 17918845
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  17918804 attttgacttttgagttgaaccttagatgcttttgagtgcct 17918845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 21366308 - 21366349
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  21366308 attttgacttttgagttgaaccttagatgcttttgagtgcct 21366349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 5888837 - 5888909
Alignment:
Q  49 cttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||| ||| |||||||||||||||| ||| | || |||||||||||||| |||||  ||||||||||| ||||    
T  5888837 cttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacatgga 5888909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 22032792 - 22032752
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  22032792 ttttgacttttgagttgaaccttagatgcttttgagtgcct 22032752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 22588571 - 22588459
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    ||||||||||||  |||||| ||| ||| | ||||| ||||| |||||   ||  |||||||||||||||||  ||  || |||||||||| ||||||||    
T  22588571 gcagagagcatgttagattttatgttttcgactttttagttggaccttgagtgtctttgagtgcctgaacatacctagtattgattaggaatgaatgtag 22588472  T
Q  104 gatgagattgaac 116  Q
    ||| |||||||||    
T  22588471 gatcagattgaac 22588459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 31342579 - 31342539
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  31342579 ttttgacttttgagttgaaccttagatgcttttgagtgcct 31342539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 23201845 - 23201802
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||    
T  23201845 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 23201802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 41294121 - 41294176
Alignment:
Q  62 gagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||||||||||| ||  || |||||||||| ||||||||||| ||||||||||    
T  41294121 gagtgcctgaacatgcctagtattgattaggaatgaatgtaggatcagattgaacc 41294176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 17284512 - 17284430
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||| ||||| |||||  |||| || ||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  17284512 ctttttagttggaccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 17284430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 24555010 - 24554896
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||    |||| | ||||| ||||| |||||   ||| |||||||||||||| ||  ||  ||||||||||||| ||||||||    
T  24555010 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaatatacctagtaatgattaggaatgaatgtag 24554911  T
Q  104 gatgagattgaacct 118  Q
    ||  |||||||||||    
T  24554910 gacaagattgaacct 24554896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 25406847 - 25406789
Alignment:
Q  59 tttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  25406847 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 25406789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 25535409 - 25535351
Alignment:
Q  60 ttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    ||||||||||||||||  ||  ||||||||||||| ||||||||||  |||||||||||    
T  25535409 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 25535351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 23336973 - 23337030
Alignment:
Q  60 ttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||||||||||||  ||  ||||||||||||| ||||||||||  ||||||||||    
T  23336973 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 23337030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 167
Target Start/End: Original strand, 23390388 - 23390417
Alignment:
Q  138 acttaatgaggatgttaattataatctgtg 167  Q
    ||||||||||||||||||||||||||||||    
T  23390388 acttaatgaggatgttaattataatctgtg 23390417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 72
Target Start/End: Original strand, 23500994 - 23501031
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  23500994 cttttgagttgaaccttagatgtttttgagtgcctgaa 23501031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 18769647 - 18769687
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| ||||| |||||||||||| ||||||||||||||||    
T  18769647 ttttgacttttaagttgaaccttagatgcttttgagtgcct 18769687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 21741201 - 21741277
Alignment:
Q  45 gaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||||| ||  |||||||||||||||| ||| | || |||| ||||||||| | |||  ||||||||||||||||    
T  21741201 gaaccttagatatttttgagtgcctgaacttgtatgatgatgaataggaaagattatagattgagattgaacctgga 21741277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 21887300 - 21887260
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  21887300 ttttgacttttgagttgaaccttagatgtttttgagtgcct 21887260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 407 - 272
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  407 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttatatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 308  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  307 atgagattgaacctggaaagatt-tagaatgaaactt 272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 20906 - 20770
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||| |||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20906 cagagagcatgtaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 20807  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  20806 atgagattgaacctggaaagattatagaatgaaactt 20770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 18576 - 18712
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  |||||||| |||||||| ||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18576 cagagagcatgcaagattttgtgattttgacttttgagatgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 18675  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| |||||||||||||||||||    
T  18676 atgagattgaacctggaaagattgtagaatgaaactt 18712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 105; Significance: 1e-52; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 40359 - 40223
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| || || |||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  40359 cagagagcatgcaagatttcgtgattttgacttttgagttgatccgtagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatggagg 40260  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| |||||||||||||||||||    
T  40259 atgagattgaacctggaaagattgtagaatgaaactt 40223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 39549 - 39680
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||| |||||||||||||||| |||||||||||| ||||| |||||||||||| |||||||||||||  ||||||||||||||||||||||     
T  39549 cagagagcatgccagatttcatgattttgacttttgagttgatccttagatgcttttgagtacctgaacatgtctattaatgattaggaaagaatgtaga 39648  T
Q  105 atgagattgaacctggatagattgtagaatga 136  Q
    ||||||||||||||||| ||| ||||||||||    
T  39649 atgagattgaacctggaaagaatgtagaatga 39680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 26662 - 26592
Alignment:
Q  71 aacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  26662 aacatgtctaataatgattaggaaagaatgtaggatgagattaaacctggaaagattgtagaatgaaactt 26592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 59179 - 59235
Alignment:
Q  63 agtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    ||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  59179 agtgcctgaacatgtctaataatgattaggacagaatgtagaatgagattgaacctg 59235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 167
Target Start/End: Complemental strand, 26124 - 26095
Alignment:
Q  138 acttaatgaggatgttaattataatctgtg 167  Q
    ||||||||||||||||||||||||||||||    
T  26124 acttaatgaggatgttaattataatctgtg 26095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 1e-52; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 23660525 - 23660389
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||     
T  23660525 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 23660426  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  23660425 atgagattgaacctggaaagattttagaatgaaactt 23660389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 27754078 - 27753942
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||| ||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  27754078 cagatagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctcaacatgtctaataatgattaggaaagaatgtagg 27753979  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| |||||||||||||||||||    
T  27753978 atgagattgaacctggaaagattgtagaatgaaactt 27753942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 6 - 141
Target Start/End: Original strand, 22730852 - 22730987
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||||| ||||| |||||||  |||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22730852 agagagcatgcaatatttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 22730951  T
Q  106 tgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||||||||||| |||||||||||||||||||    
T  22730952 tgagattgaacctggaaagattgtagaatgaaactt 22730987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 298433 - 298568
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  298433 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatatagg 298532  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  298533 atgagattgaacctggaaagatt-tagaatgaaactt 298568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 141
Target Start/End: Original strand, 22737799 - 22737934
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||| ||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  22737799 agagatcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagaatgtagga 22737898  T
Q  106 tgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||| || |||||||||||||||||||    
T  22737899 tgagattgaacctagaaagattgtagaatgaaactt 22737934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 23654028 - 23654144
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  23654028 cagagagcatgcaagatttcataattttgacttttgagttgaaccttagatgcttttgactgcctgaacatgtctaataatgattaggaaagaatgtagg 23654127  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  23654128 atgagattgaacctgga 23654144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 22337617 - 22337483
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||||||||||| ||||| || |||||||||||| ||||| |||||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  22337617 agagagcatgcaagatttcgtgattctgacttttgagttgatccttagatgcttttgagtgtatgaacatgtctaataatgattaggaaagaatgtagga 22337518  T
Q  106 tgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||||||||||| ||||| |||||||||||||    
T  22337517 tgagattgaacctggaaagatt-tagaatgaaactt 22337483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 20309597 - 20309481
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||    
T  20309597 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttatatgcttttgagtgcctggatatgtctaataatgattaggaaagaatgtagg 20309498  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  20309497 atgagattgaacctgga 20309481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 23286352 - 23286237
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||||||||||| | |||||| |||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  23286352 agagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtagga 23286253  T
Q  106 tgagattgaacctgga 121  Q
    ||||||||||| ||||    
T  23286252 tgagattgaacatgga 23286237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 141
Target Start/End: Complemental strand, 23076940 - 23076808
Alignment:
Q  8 agagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatg 107  Q
    ||||||||||||||||| |||||||| || || |||||| ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  23076940 agagcatgcaagatttcgtgattttgactattaagttgatccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatg 23076841  T
Q  108 agattgaacctggatagattgtagaatgaaactt 141  Q
    |||||| ||||||| ||||| |||||||||||||    
T  23076840 agattggacctggaaagatt-tagaatgaaactt 23076808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 32451562 - 32451683
Alignment:
Q  20 atttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    ||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||| ||    
T  32451562 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacatg 32451661  T
Q  120 gatagattgtagaatgaaactt 141  Q
    || |||||||||||||||||||    
T  32451662 gaaagattgtagaatgaaactt 32451683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 28291920 - 28292027
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||     
T  28291920 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaagaatgattaggaaagaatgtaga 28292019  T
Q  105 atgagatt 112  Q
    ||||||||    
T  28292020 atgagatt 28292027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 37745 - 37861
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||| ||||||||| ||||| |  ||||| ||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||  |||||||    
T  37745 cagaaagcatgcaaaatttcgtatttttgacttttgagtggaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaagatgtagg 37844  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  37845 atgagattgaacctgga 37861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 23071614 - 23071695
Alignment:
Q  38 ttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  23071614 ttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 23071695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 22133859 - 22133948
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    ||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||    
T  22133859 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 22133948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 25176331 - 25176229
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||| | |||||| | |||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||  || ||  |||||||||||||    
T  25176331 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaaggttggagattgagattgaacct 25176232  T
Q  119 gga 121  Q
    |||    
T  25176231 gga 25176229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 28406433 - 28406353
Alignment:
Q  54 atgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagattgtagaat 134  Q
    |||||||||||||||||||||||||| ||||| ||||||||||| || || ||||||||||||||| | ||||| ||||||    
T  28406433 atgcttttgagtgcctgaacatgtctaataataattaggaaagattggagaatgagattgaacctgtaaagattttagaat 28406353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 23100849 - 23100916
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    |||||||||||||||||||| | |||||| |||||||||||||||| | ||| |||| ||||||||||    
T  23100849 cagagagcatgcaagatttcgtaattttgacttttgagttgaacctcagatgtttttaagtgcctgaa 23100916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 24503587 - 24503473
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||    |||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  24503587 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 24503488  T
Q  104 gatgagattgaacct 118  Q
    ||  |||||||||||    
T  24503487 gacaagattgaacct 24503473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 24658116 - 24658055
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgatta 90  Q
    ||||| |||||||||||||||||| |||||||||||||||| || |||| |  |||||||||    
T  24658116 ttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaatgatta 24658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 25963359 - 25963400
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  25963359 attttgacttttgagttgaaccttagatgcttttgagtgcct 25963400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 12829492 - 12829434
Alignment:
Q  59 tttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  12829492 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 12829434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 22740609 - 22740651
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgt 77  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||    
T  22740609 cttttgagttgaaccttagatgtttttgagtgcctgaagatgt 22740651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 22758364 - 22758406
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgt 77  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||    
T  22758364 cttttgagttgaaccttagatgtttttgagtgcctgaagatgt 22758406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 69
Target Start/End: Original strand, 24654998 - 24655032
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||||||||||||||| ||||||||||||||||    
T  24654998 cttttgagttgaaccttagatgcttttgagtgcct 24655032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 21917958 - 21917999
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||| ||||||| ||||||||||||||||    
T  21917958 attttgacttttgagtttaaccttagatgcttttgagtgcct 21917999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 167
Target Start/End: Original strand, 22731126 - 22731155
Alignment:
Q  138 acttaatgaggatgttaattataatctgtg 167  Q
    ||||||||||||||||||||||||||||||    
T  22731126 acttaatgaggatgttaattataatctgtg 22731155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 167
Target Start/End: Original strand, 22738072 - 22738101
Alignment:
Q  138 acttaatgaggatgttaattataatctgtg 167  Q
    ||||||||||||||||||||||||||||||    
T  22738072 acttaatgaggatgttaattataatctgtg 22738101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 22811576 - 22811617
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| ||||||||||||||||||  |||||||||||||||    
T  22811576 attttgacttttgagttgaaccttaggtgcttttgagtgcct 22811617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 37525141 - 37525100
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||| ||||||| ||||||||||||||||    
T  37525141 attttgacttttgagttaaaccttagatgcttttgagtgcct 37525100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 22798769 - 22798809
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  22798769 ttttgacttttgagttgaaccttagatgtttttgagtgcct 22798809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 27263703 - 27263667
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagt 65  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  27263703 ttttgacttttgagttgaaccttagatgcttttgagt 27263667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 45677798 - 45677838
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  45677798 ttttgacttttgagttgaaccttagatgtttttgagtgcct 45677838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 102; Significance: 9e-51; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 8154 - 8286
Alignment:
Q  8 agagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatg 107  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8154 agagcatgcaagatttcgtgattttgacttttgagttgatccttg-atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatg 8252  T
Q  108 agattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||||||||| |||||||||||||||||||    
T  8253 agattgaacctggaaagattgtagaatgaaactt 8286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 167
Target Start/End: Original strand, 8425 - 8454
Alignment:
Q  138 acttaatgaggatgttaattataatctgtg 167  Q
    ||||||||||||||||||||||||||||||    
T  8425 acttaatgaggatgttaattataatctgtg 8454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 2703 - 2826
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2703 cagagagcttgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 2802  T
Q  105 atgagattgaacctggatagattg 128  Q
    ||||||||||||||||| ||||||    
T  2803 atgagattgaacctggaaagattg 2826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 13594 - 13459
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  13594 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatgtagga 13495  T
Q  106 tgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||||| ||| | |||||||||||||||||||    
T  13494 tgagattgaatctgaaaagattgtagaatgaaactt 13459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 34623 - 34509
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||     
T  34623 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 34524  T
Q  105 atgagattgaacctg 119  Q
    |||||||||||||||    
T  34523 atgagattgaacctg 34509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 97; Significance: 9e-48; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 3973 - 3837
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| | ||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  3973 cagagagcatgcaagatttcgtgattttgacttttgagttgatctttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtagg 3874  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||||||||||||  ||||||||||| ||||||    
T  3873 atgagattgaacctggaatgattgtagaatcaaactt 3837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 833 - 709
Alignment:
Q  17 aagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaac 116  Q
    |||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  833 aagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaac 734  T
Q  117 ctggatagattgtagaatgaaactt 141  Q
    || || ||| | |||||||||||||    
T  733 ctagaaagaatttagaatgaaactt 709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 9e-48; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 44053332 - 44053196
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  44053332 cagagagcatgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctaataatgattgggaaagaatgtagg 44053233  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||| | ||||| ||| |||||||||    
T  44053232 atgagattgaacctgtaaagattataggatgaaactt 44053196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 14039151 - 14039016
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||| |    
T  14039151 agagagcttgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgatttggaaagaatgtagaa 14039052  T
Q  106 tgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||| || ||||| |||||||||||||    
T  14039051 tgagattgaacctagaaagattttagaatgaaactt 14039016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 6190921 - 6190800
Alignment:
Q  20 atttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    |||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||    
T  6190921 atttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctg 6190822  T
Q  120 gatagattgtagaatgaaactt 141  Q
    || |||||||||||||||||||    
T  6190821 gaaagattgtagaatgaaactt 6190800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 7799200 - 7799064
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| ||| |||||||| ||||| ||||||||||||||||||||||| || ||||||||||||| | ||||||||    
T  7799200 cagagagcatgcaagatttcgtgattttgacttctgagttgatccttagatgcttttgagtgcctgaacatgactaataatgattaggacataatgtagg 7799101  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| || ||||||||||||||||    
T  7799100 atgagattgaacctggaaagtttgtagaatgaaactt 7799064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 15552316 - 15552200
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15552316 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 15552217  T
Q  105 atgagattgaacctgga 121  Q
    ||||||||| |||||||    
T  15552216 atgagattggacctgga 15552200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 22636937 - 22636801
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  |||||||| ||| |||||||| ||||| ||||||||||||| ||||| |||||| ||||||||||||||||||||||||    
T  22636937 cagagagcatgcaagattttgtgattttgacttctgagttgatccttagatgcttttgagtgtctgaagatgtctaataatgattaggaaagaatgtagg 22636838  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| | |||||||||||||||||    
T  22636837 atgagattgaacctggaaaaattgtagaatgaaactt 22636801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 6 - 141
Target Start/End: Original strand, 44928542 - 44928677
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||| ||||||||| | |||||||| |||||||||||| ||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| |    
T  44928542 agagagcttgcaagattccgtgattttgacttttgagttgatccttatatgtttttgagtgcctgaacatatctaataatgattaggaaagaatgtagaa 44928641  T
Q  106 tgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||||||||||| ||||| |||||||||||||    
T  44928642 tgagattgaacctggaaagattttagaatgaaactt 44928677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 3097135 - 3097019
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||||| |||||| |||||||||| ||||||| ||| ||| |||||||||||||||||| ||||||||||||||||||||||||    
T  3097135 cagagagcatgcaagatttcataattttgacttttgagttaaaccttagatgttttcgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 3097036  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  3097035 atgagattgaacctgga 3097019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 12903248 - 12903133
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  12903248 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttt-gagtgcctgaacatgtctaataatgattaggaaagaatgtagg 12903150  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  12903149 atgagattgaacctgga 12903133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 13812427 - 13812562
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||| ||||||||    
T  13812427 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgtctgaacatgtctaatattgattaggaaataatgtagg 13812526  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||| | |||||||||||||    
T  13812527 atgagattgaacctggaaagact-tagaatgaaactt 13812562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 22633831 - 22633966
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||||| ||| ||||  |||||||||||||||||||| ||| ||||||||||||||||||||    
T  22633831 cagagagcatgcaagatttcgtgattttgacttttgagttgaactttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 22633930  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||| | |||||||||||||    
T  22633931 atgagattgaacctggaaagact-tagaatgaaactt 22633966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 24029244 - 24029109
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| |||  ||||||||||||||||||||| ||| |||||| |||||||||||||    
T  24029244 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtctttgagtgcctgaacatgtctaatattgattatgaaagaatgtagg 24029145  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||| | |||||||||||||    
T  24029144 atgagattgaacctggaaagact-tagaatgaaactt 24029109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 7089366 - 7089253
Alignment:
Q  8 agagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatg 107  Q
    ||||||||||||||||| | |||||| |||||||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||||||||||    
T  7089366 agagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcctatgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatg 7089267  T
Q  108 agattgaacctgga 121  Q
    ||||||||||||||    
T  7089266 agattgaacctgga 7089253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 16239610 - 16239746
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaag-aatgtag 103  Q
    |||||||||||||||||||| | |||||| |||||||||||  ||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  16239610 cagagagcatgcaagatttcgtaattttgacttttgagttgctccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaatgtag 16239709  T
Q  104 gatgagattgaacctggatagattgtagaatgaaactt 141  Q
     ||||||||||||||||| ||||| |||||||||||||    
T  16239710 aatgagattgaacctggaaagatt-tagaatgaaactt 16239746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 16377140 - 16377272
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||| ||| |||||||||||||||||||| |||||||||||| ||||| ||||||||||| | |||||||||||| ||||||||||||||| ||||||||    
T  16377140 cagatagcttgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagcgtctgaacatgtctaataatgattaggaaataatgtagg 16377239  T
Q  105 atgagattgaacctggatagattgtagaatgaa 137  Q
    |||||||||||||||||  ||| ||||||||||    
T  16377240 atgagattgaacctggaatgatcgtagaatgaa 16377272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 20156908 - 20157024
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||| | ||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  20156908 cagagagcatgcaagatttcgtgattttgacttttgagttaatccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 20157007  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  20157008 atgagattgaacctgga 20157024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 15091400 - 15091264
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||| |||||||| |||||||||||| | ||| ||||||||||||  |||||||||||| ||| |||||||||||||||||||     
T  15091400 cagagagcttgcaagatttcgtgattttgacttttgagttgatctttagatgcttttgagtttctgaacatgtctaatattgattaggaaagaatgtaga 15091301  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||||||||||||  |||| |||||||||||||    
T  15091300 atgagattgaacctggaaggattttagaatgaaactt 15091264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 16597148 - 16597016
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||   | ||||||  |||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||     
T  16597148 cagagagcatgcaagattctgtaattttgatttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 16597049  T
Q  105 atgagattgaacctggatagattgtagaatgaaa 138  Q
    ||||||||||||||||| ||| | ||||||||||    
T  16597048 atgagattgaacctggaaagact-tagaatgaaa 16597016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 14052932 - 14053047
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||| | |  ||||| |||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  14052932 cagagagcatgcaagatt-cgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagg 14053030  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||| ||||    
T  14053031 atgagattgaacttgga 14053047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 44102697 - 44102577
Alignment:
Q  20 atttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    ||||| |||||||| |||||||||||| ||||| |||||||||||||||||| ||||| | |||||||||| | ||||||||||||||||||||||||||    
T  44102697 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgagcatgtttaataatgattatg-aagaatgtaggatgagattgaacctg 44102599  T
Q  120 gatagattgtagaatgaaactt 141  Q
    |||||||| |||||| ||||||    
T  44102598 gatagattttagaataaaactt 44102577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 8846865 - 8846746
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| ||||||||||||  |||| ||| |||||||| ||||||||||||| ||||||||||||||||| || || |||||||||||||    
T  8846865 agatttcgtaattttgacttttgagttgattcttagatgtttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 8846766  T
Q  118 tggatagattgtagaatgaa 137  Q
    |||| ||||| |||||||||    
T  8846765 tggaaagattttagaatgaa 8846746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 12774488 - 12774385
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||| ||||| || || |||||||||||||    
T  12774488 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattagaaaagattggagaatgagattgaacc 12774389  T
Q  118 tgga 121  Q
    ||||    
T  12774388 tgga 12774385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 17047726 - 17047813
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaac 116  Q
    ||||| |||||||||||||||||| |||  |||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  17047726 ttttgacttttgagttgaaccttagatgtctttgagtgcctgaacatgactaataatgattaggaaaaaatgtaggatgagattgaac 17047813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 21814936 - 21815038
Alignment:
Q  20 atttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    ||||| |||||||| |||||||||||| ||||| ||||||||||||| |||||||||| | ||||||||||||||||||| ||| |||| | ||||||||    
T  21814936 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctg 21815035  T
Q  120 gat 122  Q
    |||    
T  21815036 gat 21815038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 21818358 - 21818460
Alignment:
Q  20 atttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    ||||| |||||||| |||||||||||| ||||| ||||||||||||| |||||||||| | ||||||||||||||||||| ||| |||| | ||||||||    
T  21818358 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctg 21818457  T
Q  120 gat 122  Q
    |||    
T  21818458 gat 21818460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 21815265 - 21815367
Alignment:
Q  20 atttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    ||||| |||||||| |||||||||||| ||||| ||||||||||||| |||||||||| | ||||||||||||||| ||| ||| |||| | ||||||||    
T  21815265 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaataatttagaatgataatgaacctg 21815364  T
Q  120 gat 122  Q
    |||    
T  21815365 gat 21815367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 39705920 - 39706022
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||| | |||||| | ||| |||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||| || ||  | |||||||||||    
T  39705920 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagattaagattgaacct 39706019  T
Q  119 gga 121  Q
    |||    
T  39706020 gga 39706022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 17046765 - 17046718
Alignment:
Q  59 tttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggat 106  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17046765 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 17046718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 15099813 - 15099737
Alignment:
Q  45 gaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||||| ||| |||||||||||||||| ||| | || |||||||||||||| |||||  ||||||||||||||||    
T  15099813 gaaccttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctgga 15099737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 43198242 - 43198322
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||| ||||||| ||| |||||||||||||||||||| | ||||||||||||||||| | |||  ||||||||||| ||||    
T  43198242 agttaaaccttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagattttagattgagattgaacatgga 43198322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 15868289 - 15868368
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgg 120  Q
    |||||||||||| ||| ||||||||||||||| |||| | ||||||||||||||||  | |||  |||||||||||||||    
T  15868289 agttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggaaagtttttagattgagattgaacctgg 15868368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 13845028 - 13844950
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaaga 97  Q
    |||||| | |||||| ||||| |||||||||||| ||| ||||||||| |||||||||||| || |||||||| |||||    
T  13845028 gatttcgtaattttgacttttaagttgaaccttagatgtttttgagtgtctgaacatgtctaattatgattagaaaaga 13844950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 14679439 - 14679325
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||    |||| | ||||| ||||| |||||  |||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  14679439 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgaatgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 14679340  T
Q  104 gatgagattgaacct 118  Q
    ||  |||||||||||    
T  14679339 gacaagattgaacct 14679325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 14685646 - 14685534
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    |||||||||| |||||||    |||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||||    
T  14685646 agagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtagga 14685547  T
Q  106 tgagattgaacct 118  Q
    | |||||||||||    
T  14685546 taagattgaacct 14685534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 121
Target Start/End: Original strand, 52242868 - 52242927
Alignment:
Q  62 gagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||||||||||||| | |||||||| |||||||| | ||| |||||||||||||||||    
T  52242868 gagtgcctgaacatgtataataatgatcaggaaagattctagaatgagattgaacctgga 52242927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 23838910 - 23838796
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||    |||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  23838910 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 23838811  T
Q  104 gatgagattgaacct 118  Q
    ||  |||||||||||    
T  23838810 gacaagattgaacct 23838796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 15464600 - 15464661
Alignment:
Q  58 ttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    ||||||||||||||| |||| | ||||||||||||||||| | |||  ||||||||||||||    
T  15464600 ttttgagtgcctgaatatgtataataatgattaggaaagattttagattgagattgaacctg 15464661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 16348334 - 16348375
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  16348334 attttgacttttgagttgaaccttagatgcttttgagtgcct 16348375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 15190780 - 15190704
Alignment:
Q  45 gaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||||| ||| |||||||||||||||||||||| || |||||||| ||||  | |||  ||||||| ||||||||    
T  15190780 gaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaaggttctagattgagatttaacctgga 15190704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 16356596 - 16356636
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  16356596 ttttgacttttgagttgaaccttagatgcttttgagtgcct 16356636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 13427 - 13506
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgg 120  Q
    |||||||| ||| ||| ||||||||||||||||| || | |||||||||||| |||  | |||  |||||||||||||||    
T  13427 agttgaactttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgg 13506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 17053533 - 17053482
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgc 57  Q
    ||||||||||||||||||| |  ||||| |||||||||||||||||| ||||    
T  17053533 agagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgc 17053482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 40471920 - 40471837
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    ||||| ||||| |||||  |||| || ||||||||||||||  ||  || |||||||||| ||||||||||| |||||||||||    
T  40471920 ctttttagttggaccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacct 40471837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 386038 - 386096
Alignment:
Q  59 tttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  386038 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 386096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 3332321 - 3332275
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgag-ttgaacct 50  Q
    |||||||||||||||||||| |||||||| |||||||| ||||||||    
T  3332321 cagagagcatgcaagatttcgtgattttgacttttgagattgaacct 3332275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 7900855 - 7900913
Alignment:
Q  59 tttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  7900855 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 7900913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 15321778 - 15321836
Alignment:
Q  59 tttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  15321778 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 15321836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 32851918 - 32851868
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattag 91  Q
    |||||||||||| ||| ||||||||||||||| |||| | |||||||||||    
T  32851918 agttgaaccttagatgattttgagtgcctgaatatgtataataatgattag 32851868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 117
Target Start/End: Complemental strand, 40478593 - 40478511
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||| ||||| |||||  |||| || ||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  40478593 ctttttagttggaccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 40478511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 51493502 - 51493560
Alignment:
Q  59 tttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  51493502 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 51493560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 44676108 - 44676047
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgatta 90  Q
    ||||| |||||||||||||||||| ||| |||||||||||| || |||| |  |||||||||    
T  44676108 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgatta 44676047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 3413248 - 3413212
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagt 65  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  3413248 ttttgacttttgagttgaaccttagatgcttttgagt 3413212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 13569988 - 13569948
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  13569988 ttttgacttttgagttgaaccttagatgtttttgagtgcct 13569948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 15094249 - 15094209
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  15094249 ttttgacttttgagttgaaccttagatgtttttgagtgcct 15094209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 15121446 - 15121486
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  15121446 ttttgacttttgagttgaaccttagatgtttttgagtgcct 15121486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 16956279 - 16956379
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    ||||||||||||  ||||||  || ||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  16956279 gcagagagcatgttagattttgtgttttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 16956378  T
Q  104 g 104  Q
    |    
T  16956379 g 16956379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 18602399 - 18602435
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagt 65  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  18602399 ttttgacttttgagttgaaccttagatgcttttgagt 18602435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 18608993 - 18609029
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagt 65  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  18608993 ttttgacttttgagttgaaccttagatgcttttgagt 18609029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 23843955 - 23843915
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  23843955 ttttgacttttgagttgaaccttagatgtttttgagtgcct 23843915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 25684 - 25815
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||| |||||||||||||| ||||| |||||||||||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  25684 agagagcttgcaagatttcatgtttttgacttttgagttgatccttagatggttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 25783  T
Q  106 tgagattgaacctggatagattgtagaatgaa 137  Q
    |||||||||||||| | |||||||||||||||    
T  25784 tgagattgaacctgaaaagattgtagaatgaa 25815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 33112 - 33248
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||| |||||||  |||||||||||| ||||| |||||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  33112 cagagagcttgcaagatttcgtgattttcacttttgagttgatccttagatgcttctgagtgcctggacatgtctaataatgattaggaaagaatgtagg 33211  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  33212 atgagattgaacctggaaagattttagaatgaaactt 33248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 141
Target Start/End: Original strand, 23921 - 24055
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||||| || ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  23921 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagattcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagga 24020  T
Q  106 tgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||||||||||| | |||||||||||||||||    
T  24021 tgagattgaacctgga-aaattgtagaatgaaactt 24055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 95; Significance: 1e-46; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 125085 - 124952
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  125085 cagagagcatgcaagatttggtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 124986  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||   ||||||||| |||||||||||||||||||    
T  124985 atgag---gaacctggaaagattgtagaatgaaactt 124952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 63039 - 62932
Alignment:
Q  30 tttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagattgt 129  Q
    |||| |||||||||||| ||||| ||| |||||||||| ||||||||||| ||||||||||||||||| || || ||||||||||||||||| | ||| |    
T  63039 tttgacttttgagttgatccttagatgtttttgagtgcatgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaatatttt 62940  T
Q  130 agaatgaa 137  Q
    ||||||||    
T  62939 agaatgaa 62932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 175267 - 175202
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctg 70  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||| ||| |||||||||||||    
T  175267 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctg 175202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 167
Target Start/End: Complemental strand, 124814 - 124785
Alignment:
Q  138 acttaatgaggatgttaattataatctgtg 167  Q
    ||||||||||||||||||||||||||||||    
T  124814 acttaatgaggatgttaattataatctgtg 124785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 15233 - 15369
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||| || |||||||| |||||||||||| ||||| ||||||||||||||||||| |||| | |||||||||||||||||||||||     
T  15233 cagagagcatgcaagatatcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaatatgtttaataatgattaggaaagaatgtaga 15332  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  15333 atgagattgaatctggatagattttagaatgaaactt 15369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 428 - 312
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  428 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 329  T
Q  105 atgagattgaacctgga 121  Q
    ||||||||||| |||||    
T  328 atgagattgaatctgga 312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 5204 - 5088
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5204 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 5105  T
Q  105 atgagattgaacctgga 121  Q
    ||||||||||| |||||    
T  5104 atgagattgaatctgga 5088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 13703 - 13587
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  13703 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttatatgcttttgagtgcctgaaaatgtctaataatgattaggaaagaatgtagg 13604  T
Q  105 atgagattgaacctgga 121  Q
    |||||| ||||||||||    
T  13603 atgagactgaacctgga 13587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 20615 - 20480
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| ||| |||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||     
T  20615 cagagagcatgcaagatttcgtgattttgacttctgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 20516  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    || |||||||||||||| ||||| |||||||||||||    
T  20515 ataagattgaacctggaaagatt-tagaatgaaactt 20480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 16833 - 16968
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| || ||||| |||| ||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||     
T  16833 cagagagcatgcaagatttcttgtttttgactttcgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 16932  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  16933 atgagattgaacctggaaagatt-tagaatgaaactt 16968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 78980 - 79097
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  | ||| || |||||||||||||||||| |||||||||||||| ||||||||| | |||||||||||||| ||||||||     
T  78980 cagagagcatgcaagattttgtaattctgacttttgagttgaaccttagatgcttttgagtgcatgaacatgtttaataatgattaggaaggaatgtaga 79079  T
Q  105 atgagattgaacctggat 122  Q
    ||||||||||||||||||    
T  79080 atgagattgaacctggat 79097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 339569 - 339701
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||  ||||| |||||||||||||| |||||||||    
T  339569 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttaaatgcttttgagtgcctgaatttgtctaataatgattaggaatgaatgtagg 339668  T
Q  105 atgagattgaacctggatagattgtagaatgaa 137  Q
    ||||||||||||||||| |||||||||||||||    
T  339669 atgagattgaacctggaaagattgtagaatgaa 339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 71789 - 71729
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagt 65  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| |||  |||||||    
T  71789 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtctttgagt 71729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 92; Significance: 8e-45; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 6 - 141
Target Start/End: Original strand, 7913 - 8047
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||||||||||  |||||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  7913 agagagcatgcaagattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagga 8012  T
Q  106 tgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||||||||||| ||| | |||||||||||||    
T  8013 tgagattgaacctggaaagact-tagaatgaaactt 8047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 53125 - 53204
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgg 120  Q
    |||||||| ||| ||| ||||||||||||||||| || | |||||||||||| |||  | |||  |||||||||||||||    
T  53125 agttgaactttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgg 53204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 13226 - 13340
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13226 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 13325  T
Q  105 atgagattgaacctg 119  Q
    |||||||||| ||||    
T  13326 atgagattgagcctg 13340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 678 - 791
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  678 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagg 777  T
Q  105 atgagattgaacct 118  Q
    ||||||||||||||    
T  778 atgagattgaacct 791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 4760 - 4876
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  4760 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 4859  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  4860 atgagattgaacctgga 4876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 8978 - 8842
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  |||||||| |||||||||||| ||||| ||||||||||||||||||| |||||| ||| ||||||||||||||||||||    
T  8978 cagagagcatgcaagattttgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaatatgtctaatagtgattaggaaagaatgtagg 8879  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    |||||||||||||| || |||||||| |||| |||||    
T  8878 atgagattgaacctagaaagattgtaaaatggaactt 8842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 10055 - 10171
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| ||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10055 cagagagcatgcaagatttcgtatttttgacttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 10154  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  10155 atgagattgaacctgga 10171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 89; Significance: 5e-43; HSPs: 4)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 5010 - 4874
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||| ||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| |    
T  5010 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaa 4911  T
Q  106 tgagattgaacctggataga-ttgtagaatgaaactt 141  Q
    |||||||||||||||| ||| || |||||||||||||    
T  4910 tgagattgaacctggaaagatttttagaatgaaactt 4874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 12592 - 12456
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||| ||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| |    
T  12592 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaa 12493  T
Q  106 tgagattgaacctggataga-ttgtagaatgaaactt 141  Q
    |||||||||||||||| ||| || |||||||||||||    
T  12492 tgagattgaacctggaaagatttttagaatgaaactt 12456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 141
Target Start/End: Complemental strand, 22544 - 22408
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||| ||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| |    
T  22544 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaa 22445  T
Q  106 tgagattgaacctggataga-ttgtagaatgaaactt 141  Q
    |||||||||||||||| ||| || |||||||||||||    
T  22444 tgagattgaacctggaaagatttttagaatgaaactt 22408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 18286 - 18326
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  18286 ttttgacttttgagttgaaccttagatgtttttgagtgcct 18326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 12427 - 12543
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||| ||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||||    
T  12427 cagagagcatgcaagatttcgtgattttgacttttgagatgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 12526  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  12527 atgagattgaacctgga 12543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 89; Significance: 5e-43; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 6 - 134
Target Start/End: Complemental strand, 16588 - 16461
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    |||||||||||||||||||| ||||||| |||||||||||| |||||   |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  16588 agagagcatgcaagatttcaagattttgacttttgagttgatccttagg-gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 16490  T
Q  106 tgagattgaacctggatagattgtagaat 134  Q
     ||||||||||||||| ||||||||||||    
T  16489 cgagattgaacctggaaagattgtagaat 16461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 32577 - 32709
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||| |||||||| ||||||||| |||||||| ||||||||||||| |||||||||||| |||||||||||||| || || ||     
T  32577 cagagagcttgcaagatttcgtgattttgacttttgagtcgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggaga 32676  T
Q  105 atgagattgaacctggatagattgtagaatgaa 137  Q
    ||||||||||||||| | ||||| |||||||||    
T  32677 atgagattgaacctgtaaagattttagaatgaa 32709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 46428 - 46296
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||| |||||||| ||||||||| |||||||| ||||||||||||| |||||||||||| |||||||||||||| || || ||     
T  46428 cagagagcttgcaagatttcgtgattttgacttttgagtcgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggaga 46329  T
Q  105 atgagattgaacctggatagattgtagaatgaa 137  Q
    ||||||||||||||| | ||||| |||||||||    
T  46328 atgagattgaacctgtaaagattttagaatgaa 46296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 40414 - 40283
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||| |  ||||||||||||| |||||||||    
T  40414 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaggaatgtagg 40315  T
Q  105 atgagattgaacctggatagattgtagaatgaa 137  Q
    |||||||||||||| || |||||||||||||||    
T  40314 atgagattgaacct-gacagattgtagaatgaa 40283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 79950 - 80085
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||||| ||| ||||  |||||||||||||||||||| ||| ||||||||||||||||||||    
T  79950 cagagagcatgcaagatttcgtgattttgacttttgagttgaacattaaatgccattgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 80049  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||| | |||||||||||||    
T  80050 atgagattgaacctggaaagact-tagaatgaaactt 80085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 5739 - 5872
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| || ||||  |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  5739 cagagagcatgcaagatttcgtgttttttacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtagg 5838  T
Q  105 atgagattgaacctggatagattgtagaatgaaa 138  Q
    ||||||||||||||||  ||||| | ||||||||    
T  5839 atgagattgaacctgggaagattattgaatgaaa 5872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 17268 - 17147
Alignment:
Q  20 atttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    ||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||    
T  17268 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 17169  T
Q  120 gatagattgtagaatgaaactt 141  Q
    |||||||| |||||| ||||||    
T  17168 gatagattttagaataaaactt 17147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 141
Target Start/End: Original strand, 7471 - 7524
Alignment:
Q  87 attaggaaagaatgtaggatgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||    
T  7471 attaggaaagaatgtaggatgagattgaacctggaaagact-tagaatgaaactt 7524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 51517 - 51638
Alignment:
Q  20 atttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    ||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||    
T  51517 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctg 51616  T
Q  120 gatagattgtagaatgaaactt 141  Q
    || ||||||| |||||||||||    
T  51617 gaaagattgtcgaatgaaactt 51638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 33003 - 32923
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||||| ||| ||| || ||||||||||||||||| | ||||||||||||||||| | |||  ||||||||||| ||||    
T  33003 agttgaactttagatgattctgagtgcctgaacatgtgtaataatgattaggaaagattctagattgagattgaacttgga 32923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 1696 - 1831
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| |||||||||   |||||||| |||||||||||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||     
T  1696 cagagagcttgcaagattctgtgattttgacttttgagttgatccttagatg-ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 1794  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  1795 atgagattgaacctggaaagattttagaatgaaactt 1831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 681 - 797
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||| ||||||||| |  ||||| |||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  681 cagagagcattcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagg 780  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  781 atgagattgaacctgga 797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 13987 - 13871
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||     
T  13987 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaggatgtagc 13888  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  13887 atgagattgaacctgga 13871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 16227 - 16351
Alignment:
Q  15 gcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattga 114  Q
    |||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||    
T  16227 gcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagaatgagattga 16326  T
Q  115 acctggatagattgtagaatgaaac 139  Q
    ||||||| ||||| | |||||||||    
T  16327 acctggaaagattttcgaatgaaac 16351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 9452 - 9587
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||| |||||||||||||||||||||| | |||||||||||||||||| |||| ||||||||||||||||||||| ||| |||||| |||||||||||||    
T  9452 cagatagcatgcaagatttcatgatttcgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtagg 9551  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||| ||||| ||| | |||||||||||||    
T  9552 atgagattgaatctggaaagact-tagaatgaaactt 9587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 141
Target Start/End: Complemental strand, 39262 - 39127
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| | |||||| ||||  |||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||     
T  39262 cagagagcatgcaagatttcgtaattttgactttgaagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 39163  T
Q  105 atgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||||| ||||| | |||||||||||    
T  39162 atgagattgaacctggaaagatt-ttgaatgaaactt 39127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 5339 - 5224
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||||||||||  | |||||| |||||||||||||||||| |||||||||||||| |||| |||||| |||||||||||||||||||||||||    
T  5339 agagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcatgaagatgtctaataatgattaggaaagaatgtagga 5240  T
Q  106 tgagattgaacctgga 121  Q
    ||||||||||||||||    
T  5239 tgagattgaacctgga 5224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 580 - 695
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||     
T  580 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtaga 679  T
Q  105 atgagattgaacctgg 120  Q
    | ||||||||||||||    
T  680 acgagattgaacctgg 695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 8110 - 8226
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||| ||||||||  || |||||| ||||||  ||| || |||| ||||||||||||   |||||||||||| |||  | |||     
T  8110 cagagagcttgcaagatttcgtgattttgagttgtgagtttaaccttggatgtttatgagggcctgaacatgtacaataatgattaggcaaggttttaga 8209  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||| ||||    
T  8210 atgagattgaacttgga 8226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 29039 - 28924
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| ||||||||| || ||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||     
T  29039 cagagagcatgcaagatttcgtgattttgacttttgagtagatccttagatgcttttgagttcctgaacatgtctaataatgattaggaaagaatgtaga 28940  T
Q  105 atgagattgaacctgg 120  Q
    ||||||||||||||||    
T  28939 atgagattgaacctgg 28924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 16771 - 16657
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| ||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16771 cagagagcatgcaagatttcgtacttttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 16672  T
Q  105 atgagattgaacctg 119  Q
    | |||||||||||||    
T  16671 acgagattgaacctg 16657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 2064 - 2177
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||||||||||  | |||||| || ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  2064 agagagcatgcaagattttgtaattttgactgttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaa 2163  T
Q  106 tgagattgaacctg 119  Q
    ||||||||||||||    
T  2164 tgagattgaacctg 2177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 32553 - 32440
Alignment:
Q  8 agagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatg 107  Q
    ||||||||||||||||| |  ||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  32553 agagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgactaggaaagaatgtgggatg 32454  T
Q  108 agattgaacctgga 121  Q
    ||||||||||||||    
T  32453 agattgaacctgga 32440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 631 - 763
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| || |||||||  |||||||| | || ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  631 cagagagcttgtaagattttgtgattttgaccttcgagttgatccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 730  T
Q  105 atgagattgaacctggatagattgtagaatgaa 137  Q
    ||||||||||| ||| | |||||||||||||||    
T  731 atgagattgaatctgaaaagattgtagaatgaa 763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 530 - 415
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||| |||| || |||||||||||||||||| ||| ||||||||||||||||||||    
T  530 cagagagcatgcaagatttcgtgattttgacttttgaattgaaccttagatgcctt-gagtgcctgaacatgtctaatattgattaggaaagaatgtagg 432  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  431 atgagattgaacctgga 415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 28899 - 29011
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||||||||||  | |||||| |||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  28899 agagagcatgcaagattttgtaattttgacttttgggttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaa 28998  T
Q  106 tgagattgaacct 118  Q
    |||||||||||||    
T  28999 tgagattgaacct 29011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 122
Target Start/End: Original strand, 20044 - 20161
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| ||| |||| |||||||||||| ||||| |||||||||||| ||||||||||| | ||||||| |||||||||||||||     
T  20044 cagagagcatgcaagatttcgtgaatttgacttttgagttgatccttagatgcttttgagttcctgaacatgtttaataatgagtaggaaagaatgtaga 20143  T
Q  105 atgagattgaacctggat 122  Q
    ||||||||||||||||||    
T  20144 atgagattgaacctggat 20161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 65412 - 65479
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    ||||||||||| |||||||  |  ||||| |||||||||||||||||| ||| |||||||||||||||    
T  65412 cagagagcatgtaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 65479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 2444 - 2328
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| |||| ||||||||||||||| ||||| ||||| |||||||| |||||||||    
T  2444 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacgtgtctaataataattaggaaggaatgtagg 2345  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  2344 atgagattgaacctgga 2328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 7102 - 6986
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||| ||||||||||||  ||||| |||||||||||||||||| |||| ||||||||||||||| ||||| ||||| |||||||| |||||||||    
T  7102 cagagagcacgcaagatttcatatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacgtgtctaataattattaggaaggaatgtagg 7003  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  7002 atgagattgaacctgga 6986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 77; Significance: 8e-36; HSPs: 3)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 121
Target Start/End: Original strand, 15094 - 15210
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| ||||| ||||||||| || |||||||||||||||| || |||||| ||||||||||||||||||||||||    
T  15094 cagagagcatgcaagatttcgtatttttgacttttaagttgaaccgtagatgcttttgagtgccttaatatgtctaataatgattaggaaagaatgtagg 15193  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  15194 atgagattgaacctgga 15210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 32894 - 32968
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtct 79  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| |||||||||| |||||||||||||||    
T  32894 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgaatgcctgaacatgtct 32968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 7758 - 7726
Alignment:
Q  37 tttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||||||||||||| ||||||||||||||||    
T  7758 tttgagttgaaccttagatgcttttgagtgcct 7726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 47478 - 47362
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  | ||| |||||||||||||||||| ||||||||||||| ||||| |||||| |||||||||||||| |||||||||    
T  47478 cagagagcatgcaagatttcgtattgttgacttttgagttgaaccttagatgcttttgagtgtctgaatatgtctaataatgattaggaatgaatgtagg 47379  T
Q  105 atgagattgaacctgga 121  Q
    |||||||||||||||||    
T  47378 atgagattgaacctgga 47362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 64306 - 64346
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  64306 ttttgacttttgagttgaaccttagatgcttttgagtgcct 64346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 10412 - 10297
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    |||||||||| |||||||  |||||||| |||||||||||||||||| |||| ||||||||||| |||||||||  || |||||||||||||||||||||    
T  10412 agagagcatgtaagattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctaaacatgtctattattgattaggaaagaatgtagga 10313  T
Q  106 tgagattgaacctgga 121  Q
    ||||||||||||||||    
T  10312 tgagattgaacctgga 10297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 10647 - 10540
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||| |||||||| | |||||||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  10647 cagagagcttgcaagatttcgtgattttgacctttgagttgatccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtagg 10548  T
Q  105 atgagatt 112  Q
    ||||||||    
T  10547 atgagatt 10540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 21392 - 21277
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagga 105  Q
    ||||||||||||||||||  | |||||| |||||||||||||||||| ||| |||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  21392 agagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgttttttagtgcctgaacatgtctaataatgattatgaaagaatgtagga 21293  T
Q  106 tgagattgaacctgga 121  Q
    |||||||| |||||||    
T  21292 tgagattgtacctgga 21277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 16161 - 16047
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||  | |||||| |||| ||||||| ||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||     
T  16161 cagagagcatgcaagattttgtaattttgactttagagttgatccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaga 16062  T
Q  105 atgagattgaacctg 119  Q
    |||||||||||||||    
T  16061 atgagattgaacctg 16047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 1840 - 1768
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgt 77  Q
    ||||||||||| |||||||| | |||||| |||||||||||||||||| ||| ||||||||||||||| ||||    
T  1840 cagagagcatgtaagatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgt 1768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 11172 - 11258
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11172 cttttgagttgaaccttagattcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgga 11258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 14106 - 14055
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattagg 92  Q
    |||||||||||| ||| ||||||||||||||| |||| | ||||||||||||    
T  14106 agttgaaccttagatgattttgagtgcctgaatatgtataataatgattagg 14055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 134
Target Start/End: Complemental strand, 23362 - 23256
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagatt 127  Q
    |||||| |||||||||||| ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||| |||||    
T  23362 attttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggatctggaaagatt 23263  T
Q  128 gtagaat 134  Q
    |||||||    
T  23262 gtagaat 23256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 24268 - 24404
Alignment:
Q  5 cagagagcatgcaagatttcatgattttgg-cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||||||||||| ||||||| | |||||||||| ||||||| ||||  |||||||||||||||||||| ||| ||||||||||||||| |||    
T  24268 cagagagcatgcaagatttcgtgatttttgacttttgagtttaaccttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatttag 24367  T
Q  104 gatgagattgaacctggatagattgtagaatgaaactt 141  Q
    ||||||||||||||| || ||| | |||||||||||||    
T  24368 gatgagattgaacctagaaagact-tagaatgaaactt 24404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 116
Target Start/End: Original strand, 6449 - 6557
Alignment:
Q  8 agagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatg 107  Q
    |||| ||||||||||||||||||||| |||||||| ||| ||||| |||| ||| ||||||||||||||||| ||||||||||||||||||||||| |||    
T  6449 agagaatgcaagatttcatgattttgacttttgagatgatccttagatgccttttagtgcctgaacatgtctaataatgattaggaaagaatgtagaatg 6548  T
Q  108 agattgaac 116  Q
    |||||||||    
T  6549 agattgaac 6557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 7301 - 7182
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||| || || |||||||||||||    
T  7301 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 7202  T
Q  118 tggatagattgtagaatgaa 137  Q
    |||| ||||| |||||||||    
T  7201 tggaaagattttagaatgaa 7182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 8483 - 8403
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||||||||| ||| ||||| ||| ||||| |||| | ||||||||||| ||||| | |||  ||||||||||||||||    
T  8483 agttgaaccttaaatgtttttgggtgtctgaatatgtgtaataatgattagaaaagattctagattgagattgaacctgga 8403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 1382 - 1290
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||    
T  1382 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacattactaataatgattaggaaagaatgtaggatgagattgaacctgga 1290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 5026 - 4894
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||| ||| |||  |||||||||||||||||| |||||||||||||||| |||||||||  |||||| |||| |||| |||||     
T  5026 cagagagcttgcaagatttcgtgactttaacttttgagttgaaccttagatgcttttgagtgcctaaacatgtctattaatgactagggaagattgtaga 4927  T
Q  105 atgagattgaacctggatagattgtagaatgaa 137  Q
    ||||||||||||||| | ||||| |||||||||    
T  4926 atgagattgaacctgaaaagattttagaatgaa 4894  T

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Target: scaffold0028 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 138
Target Start/End: Complemental strand, 133143 - 133023
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||| || || |||||||||||||    
T  133143 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 133044  T
Q  118 tggatagattgtagaatgaaa 138  Q
    |||| ||| | ||||||||||    
T  133043 tggaaagactttagaatgaaa 133023  T

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Target: scaffold0150 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 138
Target Start/End: Complemental strand, 32563 - 32453
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagatt 127  Q
    |||||| |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||| ||| |    
T  32563 attttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagact 32464  T
Q  128 gtagaatgaaa 138  Q
     ||||||||||    
T  32463 ttagaatgaaa 32453  T

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Target: scaffold0001 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 161165 - 161056
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagatt 127  Q
    |||||| |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||| ||| |    
T  161165 attttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggagagact 161066  T
Q  128 gtagaatgaa 137  Q
     |||||||||    
T  161065 ttagaatgaa 161056  T

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Target: scaffold0475 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 9579 - 9447
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    ||||||||||||||||||   || ||||| |||||||| ||| ||||| ||||||||||||||||||||| |||| |||| ||||||||||||||||||     
T  9579 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 9480  T
Q  105 atgagattgaacctggatagattgtagaatgaa 137  Q
     |||||||| ||||||| ||| | |||||||||    
T  9479 gtgagattggacctggaaagagtttagaatgaa 9447  T

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Target: scaffold0165 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 3949 - 3857
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    ||||| |||||||||||||||||| |||  |||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||    
T  3949 ttttgacttttgagttgaaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctgga 3857  T

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Target: scaffold0165; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 121
Target Start/End: Complemental strand, 8013 - 7921
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    ||||| |||||||||||||||||| |||  |||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||    
T  8013 ttttgacttttgagttgaaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctgga 7921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 27296 - 27375
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgg 120  Q
    |||||||| ||| ||| |||||||||||||||||||| | |||||||||||| |||  | |||  |||||||||||||||    
T  27296 agttgaactttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctgg 27375  T

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Target: scaffold0503 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 12416 - 12314
Alignment:
Q  20 atttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctg 119  Q
    ||||| |||||||| ||||||| |||| ||||| ||||||||||||| ||||| |||| | ||||||||||||||||||||||| |||||||||||||||    
T  12416 atttcgtgattttgacttttgaattgatccttagatgcttttgagtgtctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 12317  T
Q  120 gat 122  Q
    |||    
T  12316 gat 12314  T

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Target: scaffold0211 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 28451 - 28540
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    ||||| |||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||    
T  28451 ttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 28540  T

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Target: scaffold0102 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 19746 - 19637
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagatt 127  Q
    |||||| ||| |||||||| ||||| ||| |||||||||||||||||||||| |||||||||||||| || || || ||||||||||||||||| |||||    
T  19746 attttgacttctgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaggattggagaatgagattgaacctggaaagatt 19647  T
Q  128 gtagaatgaa 137  Q
     |||||||||    
T  19646 ttagaatgaa 19637  T

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Target: scaffold0628 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 2434 - 2554
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||||| |||||| |||||| | ||| ||||| |||||||||||| ||||||||||||| ||||||||||||||||| || || ||||| |||||||    
T  2434 agatttcataattttgacttttgggatgatccttagatgcttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagtttgaacc 2533  T
Q  118 tggatagattgtagaatgaaa 138  Q
    || | ||||| ||||||||||    
T  2534 tgtaaagattttagaatgaaa 2554  T

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Target: scaffold0032 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 52067 - 51955
Alignment:
Q  9 gagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatga 108  Q
    |||| ||||||||||| |  ||||  |||||||||| ||||||  |||| |||||||||||||||| |||| ||||||||||||||||||||||||| ||    
T  52067 gagcttgcaagatttcgtattttttacttttgagttaaacctttgatgcctttgagtgcctgaacaagtctaataatgattaggaaagaatgtaggacga 51968  T
Q  109 gattgaacctgga 121  Q
    |||||||||||||    
T  51967 gattgaacctgga 51955  T

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Target: scaffold0032; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 108984 - 109055
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggat 106  Q
    ||||| ||||||||||| ||| | |||||||||||||||||  ||  || |||||||||| |||||||||||    
T  108984 cttttaagttgaaccttgtatacctttgagtgcctgaacatacctagtattgattaggaatgaatgtaggat 109055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 138
Target Start/End: Complemental strand, 10661 - 10535
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||| ||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||| |||||| ||  || |||||||||||||           
T  10661 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgccttaacatgcctagtagtgattaggaaaga------- 10569  T
Q  105 atgagattgaacctggatagattgtagaatgaaa 138  Q
    ||||||||||||||||| ||||| ||||||||||    
T  10568 atgagattgaacctggaaagattttagaatgaaa 10535  T

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Target: scaffold0023 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 101884 - 101765
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||  |||||||||||| ||||| | | |||||||||||||||||||||| ||||||||||||||||| || || |||||||||||||    
T  101884 agatttcgtaatttttacttttgagttgatccttagaagtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 101785  T
Q  118 tggatagattgtagaatgaa 137  Q
    |||| ||| | |||||||||    
T  101784 tggagagactttagaatgaa 101765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 39640 - 39701
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtct 79  Q
    ||||||||| |||||| |||||||||||| ||||| ||| ||| ||||||||||||| ||||    
T  39640 agatttcataattttgacttttgagttgatccttagatgttttcgagtgcctgaacaggtct 39701  T

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Target: scaffold0207 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 2285 - 2379
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggat 122  Q
    |||||| |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||| || ||  |||||||||||||||||    
T  2285 attttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctggat 2379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 3412 - 3319
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||| |||||||||||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||| || ||  ||||||||||||||||    
T  3412 attttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctgga 3319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 10890 - 10970
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataat 85  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  10890 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataat 10970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 1082 - 949
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| |||||||||||||||||| |||  |||||||||  |||||||||| ||| |||||||||  ||||||| |    
T  1082 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgtctttgagtgctagaacatgtctaatattgattaggagtgaatgtaag 983  T
Q  105 atgagattgaacctggatagattgtagaatgaaac 139  Q
    ||||||| | ||||||| ||| | |||||||||||    
T  982 atgagataggacctggaaagact-tagaatgaaac 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 10200 - 10278
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaaga 97  Q
    |||||| | |||||| | |||||| ||||||||| ||| |||||||||||||||||||||| ||||||||||| |||||    
T  10200 gatttcgtaattttgacctttgagatgaaccttagatgtttttgagtgcctgaacatgtctaataatgattagtaaaga 10278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 620 - 501
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| ||||||| |||| ||||| |   |||||||||||| ||||||||| ||||||||||||||||| || || ||||||||||||     
T  620 agatttcgtaattttgacttttgaattgatccttagacttttttgagtgcctaaacatgtctaataatgattaggaaagattggagaatgagattgaact 521  T
Q  118 tggatagattgtagaatgaa 137  Q
    |||| ||||| |||||||||    
T  520 tggaaagattttagaatgaa 501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 13429 - 13327
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||| | |||||| | |||||||||||||||| ||| |||||||||||||||||||||| || |||||||||||||| || ||  | |||||||||||    
T  13429 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaagattggagattaagattgaacct 13330  T
Q  119 gga 121  Q
    |||    
T  13329 gga 13327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 29836 - 29950
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||  | |||||| ||||| ||||| |||||   |||  ||||||||||||||||  ||  ||||||||||||| ||||||||    
T  29836 gcagagagcatgtaagattttgtaattttgactttttagttggaccttgagtgccattgagtgcctgaacatacctagtaatgattaggaatgaatgtag 29935  T
Q  104 gatgagattgaacct 118  Q
    ||  |||||||||||    
T  29936 gacaagattgaacct 29950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 118
Target Start/End: Original strand, 41832 - 41946
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||  | |||||| ||||| ||||| |||||   |||  ||||||||||||||||  ||  ||||||||||||| ||||||||    
T  41832 gcagagagcatgtaagattttgtaattttgactttttagttggaccttgagtgccattgagtgcctgaacatacctagtaatgattaggaatgaatgtag 41931  T
Q  104 gatgagattgaacct 118  Q
    ||  |||||||||||    
T  41932 gacaagattgaacct 41946  T

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Target: scaffold0125 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 137
Target Start/End: Original strand, 45437 - 45539
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctggatagattgtagaat 134  Q
    |||||||||||| ||||| ||| ||||||||||||||| |||||| ||||||||||||||||| ||  | ||||||||||||||||  ||| | ||||||    
T  45437 cttttgagttgatccttagatgtttttgagtgcctgaatatgtctaataatgattaggaaagattggggaatgagattgaacctggtaagactttagaat 45536  T
Q  135 gaa 137  Q
    |||    
T  45537 gaa 45539  T

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Target: scaffold1137 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 1943 - 2030
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaac 116  Q
    ||||| |||||||||||| ||||| ||| ||||||||  |||||||||||| ||||||||||||||||| || || ||||||||||||    
T  1943 ttttgacttttgagttgatccttagatgtttttgagtcactgaacatgtctaataatgattaggaaagattggagaatgagattgaac 2030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 6083 - 5980
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| ||||| |||||| ||||| ||| ||||||||||||||||| |||| ||||||||||||||||| || ||  |||||||||||     
T  6083 agatttcgtaattttgactttttagttgatccttagatgtttttgagtgcctgaacaggtctaataatgattaggaaagattggagattgagattgaact 5984  T
Q  118 tgga 121  Q
    ||||    
T  5983 tgga 5980  T

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Target: scaffold0116 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 43436 - 43518
Alignment:
Q  39 tgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||||||||||| ||| |||||||||||||||||||||| || |||||||| ||||| | |||  ||||||||||||||||    
T  43436 tgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctgga 43518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 47356 - 47438
Alignment:
Q  39 tgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||||||||||| ||| |||||||||||||||||||||| || |||||||| ||||| | |||  ||||||||||||||||    
T  47356 tgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctgga 47438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 45; Significance: 9e-17; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 1778 - 1662
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| ||||| | |||||| ||| ||||||||| |||||||||||||||| ||| |||||||  || |  |||||    
T  1778 cagagagcatgcaagatttcgtatttttgacttttaaattgaacgttagatgcttttgcgtgcctgaacatgtctaatattgattagtgaatagggtagg 1679  T
Q  105 atgagattgaacctgga 121  Q
    | | |||||||||||||    
T  1678 acgtgattgaacctgga 1662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 7755 - 7639
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtagg 104  Q
    |||||||||||||||||||| |  ||||| ||||| | |||||| ||| ||||||||| |||||||||||||||| ||| |||||||  || |  |||||    
T  7755 cagagagcatgcaagatttcgtatttttgacttttaaattgaacgttagatgcttttgcgtgcctgaacatgtctaatattgattagtgaatagggtagg 7656  T
Q  105 atgagattgaacctgga 121  Q
    | | |||||||||||||    
T  7655 acgtgattgaacctgga 7639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 16150 - 16083
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    |||||||||| ||||||||| |  ||||| ||||||| ||||||| || |||||||||||||||||||    
T  16150 cagagagcatccaagatttcgtatttttgacttttgaattgaaccatagatgcttttgagtgcctgaa 16083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 70296 - 70224
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgt 77  Q
    ||||||||||||||||||| ||  ||||| |||||||||||||||||| ||| ||||||||||||||| ||||    
T  70296 cagagagcatgcaagattttatagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgt 70224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 118
Target Start/End: Original strand, 58102 - 58161
Alignment:
Q  59 tttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||||||||||||||  ||  ||||||||||||| ||||||||||  |||||||||||    
T  58102 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 58161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2044 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold2044
Description:

Target: scaffold2044; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 1075 - 1134
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagt 65  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||    
T  1075 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagt 1134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 7026 - 6924
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| |||||||||||| ||||  ||| ||||||||||||| |||||||| ||||| ||||||||||| || ||  ||||||||||||    
T  7026 agatttcgtaattttgacttttgagttgatcctttgatg-ttttgagtgcctggacatgtctaataataattaggaaagattggagattgagattgaacc 6928  T
Q  118 tgga 121  Q
    ||||    
T  6927 tgga 6924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 130397 - 130294
Alignment:
Q  18 agatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| | |||||| |||||||||||| ||||  ||| ||||||||||||||||||||||  | |||||||| ||||| | |||  ||||||||||||    
T  130397 agatttcgtaattttgacttttgagttgatcctttgatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacc 130298  T
Q  118 tgga 121  Q
    ||||    
T  130297 tgga 130294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 118
Target Start/End: Complemental strand, 242534 - 242420
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||    |||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  242534 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 242435  T
Q  104 gatgagattgaacct 118  Q
    |   |||||||||||    
T  242434 ggcaagattgaacct 242420  T

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Target: scaffold0020 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 15478 - 15564
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    ||||| |||||||||||| ||| |||||||||||| ||||||| | || |||||||||||||| | |||  ||||||||||||||||    
T  15478 cttttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattgagattgaacctgga 15564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 179138 - 179085
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    |||||||| |||||| ||||||||||| |||||| ||| |||| ||||||||||    
T  179138 gatttcataattttgacttttgagttggaccttagatgtttttcagtgcctgaa 179085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 682 - 755
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattga 114  Q
    ||||||| |||| ||| |||||||||||||||||||| | ||||||||||||||||| |||||  |||||||||    
T  682 agttgaatcttagatgtttttgagtgcctgaacatgtataataatgattaggaaagattgtagattgagattga 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 10995 - 10915
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    ||||||| |||| ||| |||||||||||||||||||| | |||||||||||||||||   |||  ||||||||||||||||    
T  10995 agttgaatcttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctgga 10915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 17343 - 17402
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagt 65  Q
    ||||||||||||||||||  | |||||| |||||||||||||||||| ||||||||||||    
T  17343 agagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagt 17402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 65
Target Start/End: Original strand, 15049 - 15108
Alignment:
Q  6 agagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagt 65  Q
    ||||||||||||||||||| |||||||  |||||||||||||||||| |||| |||||||    
T  15049 agagagcatgcaagatttcgtgattttcacttttgagttgaaccttagatgcctttgagt 15108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 7102 - 7000
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||| | |||||| | ||| |||||||||||| ||| |||||||||||| ||||||| | || |||||||||||||| | |||  | |||||||||||    
T  7102 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacct 7003  T
Q  119 gga 121  Q
    |||    
T  7002 gga 7000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 14482 - 14380
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||| | |||||| | ||| |||||||||||| ||| |||||||||||| ||||||| | || |||||||||||||| | |||  | |||||||||||    
T  14482 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacct 14383  T
Q  119 gga 121  Q
    |||    
T  14382 gga 14380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 7711 - 7788
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacct 118  Q
    |||||||||||| ||| ||||||||| |||||||||| | |||||||||||||||||   |||  |||||||||||||    
T  7711 agttgaaccttagatgtttttgagtgtctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacct 7788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 20483 - 20418
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctg 70  Q
    |||||||||||||||||||  |  ||||| |||||||||||||||||| ||| |||||||||||||    
T  20483 cagagagcatgcaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctg 20418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 5776 - 5852
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    ||||||| |||| ||| |||||||| ||||||||||| | ||||||||||||||| | |||||  ||||||||||||    
T  5776 agttgaatcttagatgtttttgagtacctgaacatgtataataatgattaggaaaaattgtagattgagattgaacc 5852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 1370 - 1319
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtct 79  Q
    |||||| |||||||||||||||||| |||||||||||||||| || ||||||    
T  1370 attttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtct 1319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 121
Target Start/End: Complemental strand, 12445 - 12382
Alignment:
Q  58 ttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    ||||||||| |||||||||| | ||||||||||||||||| | |||  ||||||||||||||||    
T  12445 ttttgagtgtctgaacatgtataataatgattaggaaagattttagattgagattgaacctgga 12382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 18942 - 18985
Alignment:
Q  26 tgattttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||||| |||||||||||||||||| ||||||||||||||||    
T  18942 tgattttgacttttgagttgaaccttagatgcttttgagtgcct 18985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 121
Target Start/End: Complemental strand, 227942 - 227879
Alignment:
Q  58 ttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    |||||||||||| ||||||| | ||||||||||||||||| | |||  ||||||||||||||||    
T  227942 ttttgagtgcctaaacatgtataataatgattaggaaagattctagattgagattgaacctgga 227879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 742 - 680
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattag 91  Q
    ||||| |||||||||||||||||| |||||||||||||||| || |||| | |||| ||||||    
T  742 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataaagattag 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 14980 - 14914
Alignment:
Q  5 cagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctga 71  Q
    |||||||||||||||||||  | |||||| |||| ||||||| ||||| ||||||| ||||||||||    
T  14980 cagagagcatgcaagattttgtaattttgactttagagttgatccttagatgctttggagtgcctga 14914  T

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Target: scaffold0676 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 4904 - 4863
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  4904 attttgacttttgagttgaaccttaaatgcttttgagtgcct 4863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 2326 - 2245
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaac 116  Q
    ||||| ||| |||||||| ||| ||||||||||||||| |||     |||||||||||||||| ||||| ||||||||||||    
T  2326 ctttttagtggaaccttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 2245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 3505 - 3618
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    ||||||||||||  ||||||  | |||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||| | ||||||||    
T  3505 gcagagagcatgttagattttgtaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattagggatgaatgtag 3604  T
Q  104 gatgagattgaacc 117  Q
    ||| ||||||||||    
T  3605 gatcagattgaacc 3618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 1967 - 1926
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  1967 attttgacttttgagttgaaccttagatgcttttgagtgcct 1926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 14169 - 14282
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||    |||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||||| ||||||||    
T  14169 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 14268  T
Q  104 gatgagattgaacc 117  Q
    ||  ||||||||||    
T  14269 gacaagattgaacc 14282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 8506 - 8619
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    ||||||||||||  ||||||  | |||| | ||||| ||||| ||||||  ||| ||||||||| |||||||  ||  ||||||||||| | ||||||||    
T  8506 gcagagagcatgttagattttgtaatttcgactttttagttggaccttaagtgcctttgagtgcgtgaacatacctagtaatgattagggatgaatgtag 8605  T
Q  104 gatgagattgaacc 117  Q
    ||| ||||||||||    
T  8606 gataagattgaacc 8619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 16764 - 16804
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| ||||||||||||| |||| ||||||||||||||||    
T  16764 ttttgacttttgagttgaagcttagatgcttttgagtgcct 16804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 26887 - 26834
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    |||||| | |||||| |||||||||||||||||| ||| |||||||||||||||    
T  26887 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 26834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 36024 - 36077
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    |||||| | |||||| |||||||||||||||||| ||| |||||||||||||||    
T  36024 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 36077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 36944 - 36891
Alignment:
Q  19 gatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    |||||| | |||||| |||||||||||||||||| ||| |||||||||||||||    
T  36944 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaa 36891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 44527 - 44486
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  44527 attttgacttttgagttgaaccttagatgcttttgagtgcct 44486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 30387 - 30428
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| |||||||||||||||||| ||||||||||||||||    
T  30387 attttgacttttgagttgaaccttagatgcttttgagtgcct 30428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 5943 - 5995
Alignment:
Q  20 atttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    |||||||||||||| | | |||||||||||||| ||| |||||||||||||||    
T  5943 atttcatgattttgacctgtgagttgaaccttagatgtttttgagtgcctgaa 5995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 6058 - 6018
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  6058 ttttgacttttgagttgaaccttagatgcttttgagtgcct 6018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 7253 - 7213
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  7253 ttttgacttttgagttgaaccttagatgcttttgagtgcct 7213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 6059 - 6099
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  6059 ttttgacttttgagttgaaccttagatgcttttgagtgcct 6099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 3315 - 3275
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  3315 ttttgacttttgagttgaaccttagatgcttttgagtgcct 3275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 6981 - 6941
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  6981 ttttgacttttgagttgaaccttagatgcttttgagtgcct 6941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 46370 - 46410
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  46370 ttttgacttttgagttgaaccttagatgcttttgagtgcct 46410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 13234 - 13194
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  13234 ttttgacttttgagttgaaccttagatgcttttgagtgcct 13194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 125797 - 125855
Alignment:
Q  59 tttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  125797 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 125855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 891 - 934
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||    
T  891 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 21449 - 21492
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||    
T  21449 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 21492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 29341 - 29384
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||    
T  29341 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 29384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 35524 - 35575
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattagg 92  Q
    |||||||||||| ||| ||||||||||||||| |||| | ||||||||||||    
T  35524 agttgaaccttaaatgattttgagtgcctgaatatgtataataatgattagg 35575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 27064 - 27006
Alignment:
Q  59 tttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  27064 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 27006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 80801 - 80726
Alignment:
Q  45 gaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgg 120  Q
    |||| ||| ||| |||||||||||||||||||| | |||||||||||| |||  | |||  |||||||||||||||    
T  80801 gaactttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 80726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 10599 - 10541
Alignment:
Q  59 tttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||||||||||||||||  ||  ||||||||||||| ||||||||||  ||||||||||    
T  10599 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 10541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 9762 - 9704
Alignment:
Q  59 tttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||||||||||||||||  ||  ||||||||||||| ||||||||||  ||||||||||    
T  9762 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 9704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 867 - 830
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagt 65  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  867 attttgacttttgagttgaaccttagatgcttttgagt 830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 1726 - 1767
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||| | |||||||||||||||| ||||||||||||||||    
T  1726 attttgacctttgagttgaaccttagatgcttttgagtgcct 1767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 27293 - 27256
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaa 72  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  27293 cttttgagttgaaccttagatgtttttgagtgcctgaa 27256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 35163 - 35200
Alignment:
Q  28 attttggcttttgagttgaaccttatatgcttttgagt 65  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  35163 attttgacttttgagttgaaccttagatgcttttgagt 35200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 37184 - 37071
Alignment:
Q  4 gcagagagcatgcaagatttcatgattttggcttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtag 103  Q
    |||||||||||| |||||||   ||||| | ||||| ||||| |||||   ||| |||||||||||||||||  ||  ||||||||||| | ||||||||    
T  37184 gcagagagcatgtaagattttgcgatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattagggatgaatgtag 37085  T
Q  104 gatgagattgaacc 117  Q
    |   ||||||||||    
T  37084 ggcaagattgaacc 37071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 8504 - 8423
Alignment:
Q  36 ttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||| ||||| |||||  |||| || |||| |||||||||  || ||| |||||||||| ||||||||||| ||||||||||    
T  8504 tttttagttggaccttggatgccttagagtccctgaacatacctgatattgattaggaatgaatgtaggatcagattgaacc 8423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 307541 - 307460
Alignment:
Q  36 ttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 117  Q
    |||| ||||| |||||  |||| || ||||||||||||||  ||  || |||||||||| ||||||||||| ||||||||||    
T  307541 tttttagttggaccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 307460  T

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Target: scaffold1552 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 805 - 769
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagt 65  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  805 ttttgacttttgagttgaaccttagatgcttttgagt 769  T

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Target: scaffold1124 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 2344 - 2312
Alignment:
Q  37 tttgagttgaaccttatatgcttttgagtgcct 69  Q
    |||||||||||||||| ||||||||||||||||    
T  2344 tttgagttgaaccttagatgcttttgagtgcct 2312  T

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Target: scaffold0324 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 15877 - 15837
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  15877 ttttgacttttgagttgaaccttagatgtttttgagtgcct 15837  T

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Target: scaffold0311 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 6721 - 6761
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  6721 ttttgacttttgagttgaaccttagatgtttttgagtgcct 6761  T

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Target: scaffold0104 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 2296 - 2240
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattag 91  Q
    |||||||||||||||||| |||||||| ||||||| || |||| | |||| ||||||    
T  2296 cttttgagttgaaccttagatgcttttaagtgccttaagatgtttaataaagattag 2240  T

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Target: scaffold0104; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 9978 - 9922
Alignment:
Q  35 cttttgagttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattag 91  Q
    |||||||||||||||||| |||||||| ||||||| || |||| | |||| ||||||    
T  9978 cttttgagttgaaccttagatgcttttaagtgccttaagatgtttaataaagattag 9922  T

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Target: scaffold0076 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 24174 - 24254
Alignment:
Q  41 agttgaaccttatatgcttttgagtgcctgaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctgga 121  Q
    ||||||| |||| ||| ||||||||||||||| || | | |||||||||||| |||  | |||  ||||||||||||||||    
T  24174 agttgaagcttagatgattttgagtgcctgaatatatataataatgattaggcaagcttttagattgagattgaacctgga 24254  T

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Target: scaffold0043 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 18716 - 18676
Alignment:
Q  29 ttttggcttttgagttgaaccttatatgcttttgagtgcct 69  Q
    ||||| |||||||||||||||||| ||| ||||||||||||    
T  18716 ttttgacttttgagttgaaccttagatgtttttgagtgcct 18676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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