View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1255_low_5 (Length: 479)
Name: NF1255_low_5
Description: NF1255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1255_low_5 |
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Alignment Details
Target: chr6 (Bit Score: 280; Significance: 1e-156; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 96 - 403
Target Start/End: Complemental strand, 34857746 - 34857439
Alignment:
| Q |
96 |
aaagcaaccaaacattaaagaagctgcaaaacctgctaaatatacagtaatttaaatgtaacaaaatgatggaagaggacccgtacaaaagacgtatata |
195 |
Q |
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| T |
34857746 |
aaagcaacaaaacattaaagaagctgcaaaacctgctaaaaatacagtaatttaaatgtaacaaaatgatggaagaggacccgtacaaaagacgtatata |
34857647 |
T |
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| Q |
196 |
ttaacgtatagaccagattaacgtatctatctctagctactattataagcttcatttttatttggattatagtatatccataaatagcatatctactcat |
295 |
Q |
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| T |
34857646 |
ttaacgtatagaccagattaacgtatctatctctagctactattataagcttcttttttatttggattatagtatatccataaatagcatatctactcat |
34857547 |
T |
|
| Q |
296 |
tatagtactcataagaaaacaaagttatatcatccacaattttcatgtgaacattaatagaacatgtatgcaaaagctgtttgagggaaacatccatatt |
395 |
Q |
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| T |
34857546 |
tatagtactcataagaaaacaaagttatatcatccacaattttcatgtgaacattaatagaacatgtatgcaaaagctgtttgaaggaaagatccaaatt |
34857447 |
T |
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| Q |
396 |
attcgaca |
403 |
Q |
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||| |||| |
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| T |
34857446 |
attggaca |
34857439 |
T |
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