View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12561_high_7 (Length: 249)

Name: NF12561_high_7
Description: NF12561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12561_high_7
NF12561_high_7
[»] chr8 (31 HSPs)
chr8 (1-236)||(32807184-32807421)
chr8 (97-222)||(41680832-41680957)
chr8 (94-211)||(21579927-21580044)
chr8 (109-211)||(42560248-42560350)
chr8 (100-211)||(29763589-29763699)
chr8 (19-100)||(22238224-22238305)
chr8 (19-100)||(23409629-23409710)
chr8 (109-209)||(18760564-18760664)
chr8 (29-99)||(5760525-5760595)
chr8 (19-100)||(44384875-44384956)
chr8 (38-100)||(22352889-22352951)
chr8 (19-100)||(37515539-37515620)
chr8 (29-97)||(18833406-18833474)
chr8 (117-211)||(27472400-27472493)
chr8 (117-211)||(38550095-38550188)
chr8 (19-75)||(23478202-23478258)
chr8 (100-211)||(39833892-39834004)
chr8 (117-211)||(1327129-1327222)
chr8 (17-100)||(17461258-17461351)
chr8 (31-79)||(19879962-19880010)
chr8 (20-65)||(37515487-37515532)
chr8 (94-142)||(22965763-22965811)
chr8 (20-65)||(16799446-16799491)
chr8 (63-100)||(19808568-19808605)
chr8 (38-79)||(26453851-26453892)
chr8 (29-77)||(22253268-22253316)
chr8 (109-181)||(39936813-39936885)
chr8 (29-99)||(18302841-18302913)
chr8 (50-99)||(19699198-19699247)
chr8 (21-70)||(28397511-28397560)
chr8 (29-77)||(22381835-22381883)
[»] chr7 (56 HSPs)
chr7 (1-222)||(9320439-9320660)
chr7 (27-211)||(11084946-11085130)
chr7 (19-211)||(11092680-11092868)
chr7 (94-211)||(38480251-38480368)
chr7 (94-211)||(30820977-30821094)
chr7 (94-211)||(36685971-36686088)
chr7 (1-100)||(8940065-8940164)
chr7 (109-211)||(15213728-15213830)
chr7 (19-100)||(14981641-14981722)
chr7 (19-100)||(46580881-46580962)
chr7 (19-100)||(15112777-15112858)
chr7 (20-100)||(16323886-16323966)
chr7 (19-100)||(32161049-32161130)
chr7 (19-86)||(15116317-15116384)
chr7 (21-100)||(32301123-32301202)
chr7 (117-211)||(15439322-15439416)
chr7 (117-211)||(8468351-8468444)
chr7 (117-211)||(14270148-14270241)
chr7 (117-211)||(45847744-45847837)
chr7 (19-79)||(11392109-11392169)
chr7 (27-79)||(14157206-14157258)
chr7 (19-79)||(16550874-16550934)
chr7 (19-79)||(16614728-16614788)
chr7 (19-100)||(8468540-8468632)
chr7 (117-211)||(17232545-17232638)
chr7 (19-100)||(17232741-17232833)
chr7 (29-79)||(32301077-32301127)
chr7 (117-211)||(37727648-37727742)
chr7 (22-100)||(1490260-1490348)
chr7 (27-79)||(10501525-10501576)
chr7 (19-100)||(14273338-14273429)
chr7 (19-100)||(15719819-15719910)
chr7 (27-79)||(16461056-16461108)
chr7 (19-100)||(16998416-16998507)
chr7 (54-100)||(14258319-14258365)
chr7 (54-100)||(16579627-16579673)
chr7 (21-100)||(16585990-16586079)
chr7 (109-212)||(11391897-11392001)
chr7 (109-181)||(12371455-12371527)
chr7 (109-181)||(13148275-13148347)
chr7 (21-65)||(16461016-16461060)
chr7 (21-65)||(16579584-16579628)
chr7 (29-77)||(38519341-38519389)
chr7 (54-100)||(16460971-16461017)
chr7 (109-190)||(8851959-8852040)
chr7 (63-100)||(15411117-15411154)
chr7 (94-170)||(9389705-9389781)
chr7 (21-70)||(9033457-9033507)
chr7 (31-65)||(11661243-11661277)
chr7 (31-77)||(14421921-14421967)
chr7 (29-79)||(16579538-16579588)
chr7 (29-79)||(16586075-16586125)
chr7 (32-77)||(42461921-42461966)
chr7 (109-181)||(11066645-11066717)
chr7 (57-93)||(16185960-16185996)
chr7 (27-55)||(41284143-41284171)
[»] chr5 (30 HSPs)
chr5 (1-211)||(24212289-24212499)
chr5 (1-211)||(35852544-35852754)
chr5 (94-211)||(21557766-21557883)
chr5 (100-211)||(12122242-12122353)
chr5 (94-211)||(21555100-21555217)
chr5 (109-211)||(36460199-36460301)
chr5 (94-211)||(31455704-31455824)
chr5 (102-208)||(30615778-30615883)
chr5 (94-211)||(31455091-31455211)
chr5 (20-100)||(29447838-29447918)
chr5 (94-211)||(5889133-5889250)
chr5 (27-100)||(22107640-22107713)
chr5 (100-192)||(17875234-17875326)
chr5 (19-99)||(41861544-41861624)
chr5 (19-94)||(262981-263055)
chr5 (117-211)||(5889279-5889372)
chr5 (117-211)||(29915177-29915270)
chr5 (19-79)||(17010847-17010907)
chr5 (19-79)||(19076343-19076403)
chr5 (39-96)||(33895855-33895912)
chr5 (57-99)||(6765700-6765742)
chr5 (27-77)||(23469770-23469820)
chr5 (21-98)||(25250762-25250841)
chr5 (21-98)||(25314547-25314626)
chr5 (203-245)||(24212504-24212546)
chr5 (109-193)||(21741653-21741738)
chr5 (203-236)||(35852759-35852792)
chr5 (112-188)||(21871687-21871763)
chr5 (112-188)||(21875967-21876043)
chr5 (27-55)||(31252802-31252830)
[»] chr3 (60 HSPs)
chr3 (1-211)||(6808058-6808268)
chr3 (94-211)||(31415418-31415535)
chr3 (94-211)||(31224675-31224792)
chr3 (109-211)||(11912950-11913052)
chr3 (94-211)||(15447721-15447835)
chr3 (19-100)||(52989928-52990009)
chr3 (21-100)||(11914222-11914301)
chr3 (109-211)||(49969973-49970075)
chr3 (19-100)||(24513774-24513855)
chr3 (19-100)||(14966002-14966083)
chr3 (19-100)||(24178728-24178809)
chr3 (21-100)||(324070-324149)
chr3 (21-100)||(12469736-12469815)
chr3 (21-100)||(43889832-43889911)
chr3 (19-76)||(22651977-22652034)
chr3 (117-211)||(49389772-49389867)
chr3 (27-79)||(3265117-3265169)
chr3 (19-79)||(16796327-16796387)
chr3 (19-79)||(35961758-35961818)
chr3 (27-79)||(36527710-36527762)
chr3 (117-211)||(1988953-1989047)
chr3 (109-190)||(40812015-40812096)
chr3 (19-100)||(17691914-17692005)
chr3 (117-201)||(20630210-20630294)
chr3 (21-79)||(10542494-10542552)
chr3 (19-79)||(5841790-5841850)
chr3 (109-212)||(5841958-5842062)
chr3 (19-100)||(17685725-17685816)
chr3 (94-170)||(18439845-18439921)
chr3 (57-100)||(17046182-17046225)
chr3 (120-211)||(18439951-18440041)
chr3 (29-79)||(324024-324074)
chr3 (109-211)||(12269486-12269587)
chr3 (29-79)||(43889907-43889957)
chr3 (117-194)||(30175304-30175381)
chr3 (21-65)||(18700558-18700602)
chr3 (109-181)||(40807173-40807245)
chr3 (19-100)||(54876596-54876687)
chr3 (59-98)||(21837298-21837337)
chr3 (20-79)||(32403061-32403120)
chr3 (29-79)||(10542548-10542598)
chr3 (29-79)||(12469690-12469740)
chr3 (54-100)||(18700513-18700559)
chr3 (29-79)||(18700598-18700648)
chr3 (21-74)||(15245979-15246032)
chr3 (21-74)||(15265100-15265153)
chr3 (19-56)||(45220417-45220454)
chr3 (94-170)||(1465419-1465495)
chr3 (21-65)||(9577586-9577630)
chr3 (33-77)||(10834207-10834251)
chr3 (109-181)||(22307386-22307458)
chr3 (100-195)||(12269623-12269718)
chr3 (49-99)||(42325093-42325143)
chr3 (29-98)||(49970130-49970200)
chr3 (21-74)||(15206897-15206950)
chr3 (51-99)||(6158529-6158577)
chr3 (51-99)||(14250987-14251035)
chr3 (51-99)||(14642422-14642470)
chr3 (109-181)||(17538284-17538356)
chr3 (51-99)||(37037950-37037998)
[»] chr6 (47 HSPs)
chr6 (1-211)||(22420887-22421098)
chr6 (6-211)||(2201044-2201250)
chr6 (94-211)||(20734168-20734285)
chr6 (109-211)||(34296990-34297092)
chr6 (94-211)||(27851215-27851333)
chr6 (19-100)||(17378003-17378084)
chr6 (109-211)||(19399787-19399889)
chr6 (27-98)||(18927740-18927811)
chr6 (94-211)||(25956578-25956695)
chr6 (27-100)||(28104104-28104178)
chr6 (109-211)||(18927853-18927954)
chr6 (29-99)||(19656219-19656289)
chr6 (40-100)||(15817725-15817785)
chr6 (19-99)||(15875217-15875297)
chr6 (29-100)||(15705649-15705720)
chr6 (27-100)||(17743219-17743292)
chr6 (19-79)||(15174325-15174385)
chr6 (19-79)||(18913778-18913838)
chr6 (19-79)||(18937036-18937096)
chr6 (117-211)||(25956725-25956818)
chr6 (117-211)||(31630631-31630724)
chr6 (29-95)||(20182697-20182765)
chr6 (29-95)||(22153226-22153294)
chr6 (19-79)||(28708483-28708543)
chr6 (21-100)||(22805758-22805847)
chr6 (42-79)||(17105737-17105774)
chr6 (29-99)||(19829821-19829893)
chr6 (112-201)||(27851087-27851176)
chr6 (21-77)||(20078274-20078330)
chr6 (109-181)||(27322221-27322293)
chr6 (109-212)||(28708651-28708755)
chr6 (22-65)||(19773784-19773827)
chr6 (29-75)||(17743167-17743213)
chr6 (21-79)||(27573095-27573153)
chr6 (21-79)||(27573149-27573207)
chr6 (29-99)||(23083152-23083224)
chr6 (29-77)||(18453151-18453199)
chr6 (109-181)||(18708677-18708749)
chr6 (109-181)||(23151069-23151141)
chr6 (203-245)||(2201255-2201296)
chr6 (29-96)||(18260087-18260156)
chr6 (29-98)||(19399662-19399732)
chr6 (29-79)||(27573203-27573253)
chr6 (19-56)||(15687912-15687949)
chr6 (31-64)||(23838146-23838179)
chr6 (27-55)||(19953194-19953222)
chr6 (21-93)||(27573027-27573099)
[»] chr4 (40 HSPs)
chr4 (44-211)||(15880661-15880828)
chr4 (100-211)||(33186122-33186233)
chr4 (20-100)||(14746789-14746869)
chr4 (27-98)||(9923213-9923284)
chr4 (94-211)||(13844586-13844703)
chr4 (19-100)||(17048340-17048421)
chr4 (19-98)||(26013315-26013394)
chr4 (19-100)||(13592131-13592212)
chr4 (27-98)||(11479575-11479646)
chr4 (29-99)||(53631463-53631533)
chr4 (109-211)||(9923326-9923427)
chr4 (109-211)||(11479432-11479533)
chr4 (109-211)||(35812211-35812312)
chr4 (117-211)||(362170-362263)
chr4 (109-211)||(46642750-46642851)
chr4 (117-211)||(52873261-52873354)
chr4 (19-79)||(37838822-37838882)
chr4 (19-79)||(42597551-42597611)
chr4 (100-211)||(46642887-46642997)
chr4 (21-75)||(40619661-40619715)
chr4 (19-79)||(10695117-10695176)
chr4 (19-79)||(10908883-10908942)
chr4 (117-201)||(13844463-13844547)
chr4 (27-79)||(15497263-15497315)
chr4 (19-76)||(15884288-15884345)
chr4 (172-211)||(14185252-14185291)
chr4 (27-65)||(13592219-13592257)
chr4 (112-188)||(630890-630966)
chr4 (102-170)||(15190360-15190428)
chr4 (112-188)||(15868825-15868901)
chr4 (117-181)||(19609509-19609573)
chr4 (48-99)||(9871438-9871489)
chr4 (27-62)||(15791741-15791776)
chr4 (48-99)||(32467163-32467214)
chr4 (31-65)||(24047415-24047449)
chr4 (50-99)||(20692-20741)
chr4 (38-79)||(15008106-15008147)
chr4 (29-99)||(15365029-15365101)
chr4 (29-99)||(27995871-27995943)
chr4 (102-170)||(15099393-15099461)
[»] chr1 (43 HSPs)
chr1 (1-140)||(8882077-8882216)
chr1 (100-211)||(51274309-51274420)
chr1 (117-211)||(12328576-12328670)
chr1 (129-222)||(51326892-51326985)
chr1 (130-211)||(8885447-8885528)
chr1 (19-100)||(12271388-12271469)
chr1 (19-100)||(50000596-50000677)
chr1 (19-100)||(43630340-43630421)
chr1 (94-211)||(28194406-28194523)
chr1 (19-89)||(25263060-25263130)
chr1 (21-100)||(48520347-48520426)
chr1 (19-79)||(11809478-11809538)
chr1 (107-211)||(43697433-43697537)
chr1 (27-90)||(10492015-10492078)
chr1 (19-79)||(29764508-29764568)
chr1 (125-211)||(28194553-28194638)
chr1 (19-66)||(51326615-51326662)
chr1 (21-100)||(20316470-20316551)
chr1 (117-211)||(43543034-43543127)
chr1 (36-75)||(46198583-46198622)
chr1 (29-79)||(23967683-23967733)
chr1 (19-98)||(27653430-27653519)
chr1 (117-211)||(43697297-43697390)
chr1 (54-99)||(636072-636117)
chr1 (109-190)||(48301040-48301121)
chr1 (29-77)||(14800498-14800546)
chr1 (29-77)||(14809372-14809420)
chr1 (29-77)||(21043385-21043433)
chr1 (19-100)||(22131101-22131192)
chr1 (19-79)||(23072996-23073056)
chr1 (19-100)||(48603276-48603367)
chr1 (117-211)||(46382661-46382752)
chr1 (57-100)||(51326664-51326707)
chr1 (29-79)||(20958077-20958127)
chr1 (31-77)||(28312485-28312531)
chr1 (29-79)||(48520301-48520351)
chr1 (100-170)||(49261382-49261452)
chr1 (94-170)||(20636885-20636961)
chr1 (48-99)||(8276862-8276913)
chr1 (48-99)||(24726455-24726506)
chr1 (203-245)||(8885533-8885575)
chr1 (29-79)||(20316424-20316474)
chr1 (27-65)||(47190568-47190606)
[»] scaffold0737 (1 HSPs)
scaffold0737 (94-211)||(6399-6516)
[»] scaffold1351 (1 HSPs)
scaffold1351 (94-211)||(1580-1697)
[»] chr2 (34 HSPs)
chr2 (94-211)||(24865491-24865608)
chr2 (100-211)||(22501009-22501120)
chr2 (100-211)||(22508943-22509054)
chr2 (19-100)||(23707494-23707575)
chr2 (19-100)||(27472253-27472334)
chr2 (19-100)||(34874418-34874499)
chr2 (19-100)||(24917944-24918025)
chr2 (100-211)||(7672279-7672384)
chr2 (27-100)||(21081942-21082015)
chr2 (27-100)||(22459768-22459841)
chr2 (19-100)||(24670829-24670910)
chr2 (19-100)||(24681250-24681331)
chr2 (135-211)||(2524450-2524526)
chr2 (109-211)||(6576403-6576505)
chr2 (19-79)||(21914744-21914804)
chr2 (125-192)||(22501128-22501195)
chr2 (125-192)||(22509062-22509129)
chr2 (109-192)||(24883630-24883713)
chr2 (109-211)||(24436221-24436321)
chr2 (19-79)||(34492362-34492422)
chr2 (19-79)||(37379424-37379484)
chr2 (19-79)||(13101748-13101808)
chr2 (19-65)||(24316335-24316381)
chr2 (21-70)||(39828104-39828153)
chr2 (29-77)||(34136909-34136957)
chr2 (19-62)||(27485376-27485419)
chr2 (21-100)||(20320804-20320885)
chr2 (31-77)||(21073596-21073642)
chr2 (54-100)||(23069489-23069535)
chr2 (109-181)||(24781643-24781715)
chr2 (48-99)||(5985213-5985264)
chr2 (48-99)||(25045134-25045185)
chr2 (31-64)||(9241898-9241931)
chr2 (109-181)||(5032127-5032199)
[»] scaffold0395 (1 HSPs)
scaffold0395 (94-210)||(10909-11025)
[»] scaffold0599 (3 HSPs)
scaffold0599 (109-211)||(4644-4746)
scaffold0599 (109-211)||(226-328)
scaffold0599 (21-100)||(1498-1577)
[»] scaffold0815 (1 HSPs)
scaffold0815 (94-207)||(498-611)
[»] scaffold0071 (1 HSPs)
scaffold0071 (94-211)||(14354-14471)
[»] scaffold0434 (2 HSPs)
scaffold0434 (19-100)||(7147-7228)
scaffold0434 (109-211)||(6780-6882)
[»] scaffold0022 (1 HSPs)
scaffold0022 (19-100)||(54044-54125)
[»] scaffold0025 (1 HSPs)
scaffold0025 (19-100)||(78237-78318)
[»] scaffold0019 (2 HSPs)
scaffold0019 (19-100)||(21785-21866)
scaffold0019 (31-64)||(132888-132921)
[»] scaffold0802 (2 HSPs)
scaffold0802 (27-98)||(5621-5692)
scaffold0802 (109-211)||(5478-5579)
[»] scaffold0335 (2 HSPs)
scaffold0335 (27-98)||(721-792)
scaffold0335 (109-211)||(834-935)
[»] scaffold0741 (1 HSPs)
scaffold0741 (19-100)||(6958-7039)
[»] scaffold0515 (1 HSPs)
scaffold0515 (27-100)||(4161-4234)
[»] scaffold0317 (1 HSPs)
scaffold0317 (19-100)||(7108-7189)
[»] scaffold0306 (1 HSPs)
scaffold0306 (27-100)||(4161-4234)
[»] scaffold0057 (1 HSPs)
scaffold0057 (19-100)||(70670-70751)
[»] scaffold0032 (1 HSPs)
scaffold0032 (19-100)||(67095-67176)
[»] scaffold0020 (1 HSPs)
scaffold0020 (19-100)||(169955-170036)
[»] scaffold0577 (2 HSPs)
scaffold0577 (19-93)||(7766-7840)
scaffold0577 (1-30)||(7671-7700)
[»] scaffold0061 (2 HSPs)
scaffold0061 (109-211)||(15448-15550)
scaffold0061 (109-211)||(24506-24608)
[»] scaffold0116 (3 HSPs)
scaffold0116 (94-211)||(43741-43858)
scaffold0116 (94-211)||(47661-47778)
scaffold0116 (117-211)||(43888-43981)
[»] scaffold0080 (1 HSPs)
scaffold0080 (94-211)||(59327-59443)
[»] scaffold1283 (1 HSPs)
scaffold1283 (29-99)||(1457-1527)
[»] scaffold0004 (2 HSPs)
scaffold0004 (27-93)||(362739-362805)
scaffold0004 (117-211)||(362929-363022)
[»] scaffold0359 (1 HSPs)
scaffold0359 (29-100)||(15424-15494)
[»] scaffold0076 (1 HSPs)
scaffold0076 (27-90)||(24811-24874)
[»] scaffold0009 (3 HSPs)
scaffold0009 (112-211)||(85167-85265)
scaffold0009 (19-100)||(85368-85460)
scaffold0009 (100-170)||(85301-85371)
[»] scaffold0810 (1 HSPs)
scaffold0810 (117-211)||(2969-3062)
[»] scaffold0100 (1 HSPs)
scaffold0100 (117-211)||(36152-36245)
[»] scaffold0561 (1 HSPs)
scaffold0561 (27-79)||(10440-10492)
[»] scaffold0462 (1 HSPs)
scaffold0462 (19-79)||(10343-10403)
[»] scaffold0436 (1 HSPs)
scaffold0436 (19-79)||(7990-8050)
[»] scaffold0247 (1 HSPs)
scaffold0247 (19-79)||(50-110)
[»] scaffold0034 (5 HSPs)
scaffold0034 (21-81)||(117192-117252)
scaffold0034 (29-81)||(117146-117198)
scaffold0034 (27-72)||(119802-119847)
scaffold0034 (29-65)||(119842-119878)
scaffold0034 (54-100)||(119877-119923)
[»] scaffold0014 (2 HSPs)
scaffold0014 (19-75)||(77821-77877)
scaffold0014 (27-79)||(126869-126921)
[»] scaffold1783 (1 HSPs)
scaffold1783 (38-100)||(270-332)
[»] scaffold0371 (1 HSPs)
scaffold0371 (109-211)||(3093-3194)
[»] scaffold0877 (1 HSPs)
scaffold0877 (19-100)||(2919-3010)
[»] scaffold0165 (2 HSPs)
scaffold0165 (19-100)||(7591-7682)
scaffold0165 (19-100)||(3527-3618)
[»] scaffold0096 (2 HSPs)
scaffold0096 (21-75)||(21017-21071)
scaffold0096 (29-79)||(20971-21021)
[»] scaffold0001 (2 HSPs)
scaffold0001 (126-211)||(76936-77019)
scaffold0001 (21-70)||(497387-497436)
[»] scaffold0017 (2 HSPs)
scaffold0017 (38-91)||(1380-1433)
scaffold0017 (38-91)||(8131-8184)
[»] scaffold0679 (2 HSPs)
scaffold0679 (19-79)||(2660-2720)
scaffold0679 (109-212)||(2448-2552)
[»] scaffold0156 (2 HSPs)
scaffold0156 (17-65)||(15563-15611)
scaffold0156 (57-99)||(15613-15655)
[»] scaffold0125 (1 HSPs)
scaffold0125 (19-100)||(2080-2171)
[»] scaffold0107 (2 HSPs)
scaffold0107 (29-77)||(36149-36197)
scaffold0107 (57-100)||(10290-10333)
[»] scaffold0513 (1 HSPs)
scaffold0513 (117-200)||(10983-11066)
[»] scaffold0500 (1 HSPs)
scaffold0500 (29-79)||(7519-7569)
[»] scaffold0484 (1 HSPs)
scaffold0484 (54-100)||(721-767)
[»] scaffold0018 (1 HSPs)
scaffold0018 (54-100)||(20671-20717)
[»] scaffold0011 (4 HSPs)
scaffold0011 (29-79)||(125735-125785)
scaffold0011 (54-100)||(125824-125870)
scaffold0011 (21-65)||(38267-38311)
scaffold0011 (21-65)||(125781-125825)
[»] scaffold0452 (3 HSPs)
scaffold0452 (54-99)||(13583-13628)
scaffold0452 (39-79)||(13667-13707)
scaffold0452 (21-65)||(13627-13671)
[»] scaffold0134 (1 HSPs)
scaffold0134 (109-181)||(10029-10101)
[»] scaffold0123 (1 HSPs)
scaffold0123 (27-100)||(369-452)
[»] scaffold0074 (1 HSPs)
scaffold0074 (29-77)||(8130-8178)
[»] scaffold0010 (1 HSPs)
scaffold0010 (29-77)||(616-664)
[»] scaffold0375 (1 HSPs)
scaffold0375 (109-180)||(9106-9177)
[»] scaffold0780 (1 HSPs)
scaffold0780 (19-65)||(3578-3624)
[»] scaffold0278 (2 HSPs)
scaffold0278 (21-100)||(7669-7750)
scaffold0278 (29-79)||(7623-7673)
[»] scaffold0138 (1 HSPs)
scaffold0138 (41-79)||(33061-33099)
[»] scaffold0046 (2 HSPs)
scaffold0046 (37-79)||(22639-22681)
scaffold0046 (21-70)||(17027-17076)
[»] scaffold0347 (1 HSPs)
scaffold0347 (21-70)||(8851-8900)
[»] scaffold0083 (2 HSPs)
scaffold0083 (21-99)||(806-886)
scaffold0083 (21-99)||(6110-6190)
[»] scaffold0396 (1 HSPs)
scaffold0396 (29-77)||(1863-1911)
[»] scaffold0384 (1 HSPs)
scaffold0384 (109-181)||(8189-8261)
[»] scaffold0328 (1 HSPs)
scaffold0328 (39-99)||(19516-19576)
[»] scaffold0282 (1 HSPs)
scaffold0282 (29-77)||(18271-18319)
[»] scaffold0042 (1 HSPs)
scaffold0042 (48-99)||(28410-28461)
[»] scaffold0012 (1 HSPs)
scaffold0012 (30-77)||(221310-221357)
[»] scaffold0002 (1 HSPs)
scaffold0002 (48-99)||(397625-397676)
[»] scaffold1137 (1 HSPs)
scaffold1137 (100-170)||(2300-2370)
[»] scaffold0058 (1 HSPs)
scaffold0058 (45-79)||(5606-5640)
[»] scaffold0337 (1 HSPs)
scaffold0337 (31-64)||(9836-9869)
[»] scaffold0151 (1 HSPs)
scaffold0151 (21-99)||(24266-24346)
[»] scaffold0075 (2 HSPs)
scaffold0075 (50-99)||(60391-60440)
scaffold0075 (112-188)||(8410-8486)
[»] scaffold0073 (1 HSPs)
scaffold0073 (38-79)||(56826-56867)
[»] scaffold0485 (1 HSPs)
scaffold0485 (22-70)||(10125-10173)
[»] scaffold0290 (1 HSPs)
scaffold0290 (57-89)||(17-49)
[»] scaffold0108 (1 HSPs)
scaffold0108 (29-77)||(3226-3274)
[»] scaffold0037 (1 HSPs)
scaffold0037 (27-55)||(69174-69202)


Alignment Details
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 32807184 - 32807421
Alignment:
Q  1 tacaccacctcttata-aacaacaacgtagacaacattaacaacttaag-actccaatactttggaaagacaacttacaacattacaacttagaccaaca 98  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  32807184 tacaccacctcttatagaacaacaacgtagacaacattaacaacttaatcactccaatactttggaaagacaacttataactttacaacttagaccaaca 32807283  T
Q  99 ccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcac 198  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32807284 ccatttagacatatgcagcaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcac 32807383  T
Q  199 atttaatcatcaatattaatcatcctaacatcttctct 236  Q
    |||||||||||||||||||||||| || ||||||||||    
T  32807384 atttaatcatcaatattaatcatcttagcatcttctct 32807421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 97 - 222
Target Start/End: Complemental strand, 41680957 - 41680832
Alignment:
Q  97 caccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttc 196  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||  |||||||||||||||||||||||||    
T  41680957 caccatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaattacaatttgatatcaatatctttcacaatatataaatattttc 41680858  T
Q  197 acatttaatcatcaatattaatcatc 222  Q
    |||||||||||||||||| |||||||    
T  41680857 acatttaatcatcaatataaatcatc 41680832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 21580044 - 21579927
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  21580044 caacatcatttaaacatatgcagcaagtcaccatcaataataattatcatatataacaattacaacttcatatcaacgtctttcacaatatataaatatt 21579945  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  21579944 ttcacatttaatcatcaa 21579927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 42560350 - 42560248
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42560350 atatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaacgtatttcacaatatataaatattttcacatttaatcat 42560251  T
Q  209 caa 211  Q
    |||    
T  42560250 caa 42560248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 100 - 211
Target Start/End: Complemental strand, 29763699 - 29763589
Alignment:
Q  100 catttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcaca 199  Q
    |||||| ||||||||| ||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  29763699 catttaaacatatgcagcaa-tcaccatcgataataatcatcatatataacaattacaacttcatatcaacgtctttcacaatatataaatattttcaca 29763601  T
Q  200 tttaatcatcaa 211  Q
    ||||||||||||    
T  29763600 tttaatcatcaa 29763589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 22238305 - 22238224
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22238305 caacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacc 22238224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 23409629 - 23409710
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23409629 caacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacc 23409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 209
Target Start/End: Original strand, 18760564 - 18760664
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||||| |||||| ||||||||||| ||||||| |||  || ||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  18760564 atatgcagcaagtcaacatcaacaataatcatcaaatataaccattataacttcatatcaacatctttcacaatatataaatcttttcacatttaatcat 18760663  T
Q  209 c 209  Q
    |    
T  18760664 c 18760664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 5760525 - 5760595
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  5760525 gacaacatcaacaacttaagactccaatactttggaatgacaacttacaactttacaacttagaccaacac 5760595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 44384956 - 44384875
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| |||||||||| |||| ||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||    
T  44384956 caacaacttagacaacatcaacagcttaagactccaatactttggaacgacgacttacaactttacaacttagaccaacacc 44384875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 22352889 - 22352951
Alignment:
Q  38 aacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  22352889 aacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaacacc 22352951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 37515539 - 37515620
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||| |||||||| ||||  |||||||||||||||||||    
T  37515539 caacaacttagacaacatcgacaacttaagactccaatactttggaacgacaacttgcaactctacaacttagaccaacacc 37515620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 18833406 - 18833474
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaac 97  Q
    ||||||||  |||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||    
T  18833406 gacaacatcgacaacttaagactccaatacttcggaacgacaacttacaactttacaacttagaccaac 18833474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 27472493 - 27472400
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||  ||| ||| ||| ||| ||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  27472493 caagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaa 27472400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 38550188 - 38550095
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||  ||| ||| ||| ||| ||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  38550188 caagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaa 38550095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 23478202 - 23478258
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaactta 75  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||    
T  23478202 caacaacttagacaacatcaacaacttaagactccaatactttggaacgacaactta 23478258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 211
Target Start/End: Original strand, 39833892 - 39834004
Alignment:
Q  100 catttagacatatgcaccaagtcaccatcaataataatcatcatatataa-caattgcaatttcatatcaacgtctttcacaatatataaatattttcac 198  Q
    |||||| |||||| || | ||| |||||||||||||||| |||||||||| || |||||| |||||||||||  | |||||  |||||| || |||||||    
T  39833892 catttaaacatatacagcgagtaaccatcaataataatcttcatatataaccatttgcaacttcatatcaacaacattcacgttatatagatcttttcac 39833991  T
Q  199 atttaatcatcaa 211  Q
    |||||||||||||    
T  39833992 atttaatcatcaa 39834004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 1327222 - 1327129
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||  ||| ||| ||| ||| ||||||||||| || ||||||||||||||||||| ||||| |||||||||||    
T  1327222 caagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatcgttcacaatatataaatattctcaca-ttaatcatcaa 1327129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 17461351 - 17461258
Alignment:
Q  17 aacaacaacgtagacaacattaacaacttaagactccaatacttt----------ggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||          |||||||||||||||||| ||||||||||||| ||||||    
T  17461351 aacaacaacttagacatcattaacaacttaagactccaatactttggaacactttggaaagacaacttacaactttacaacttagacaaacacc 17461258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 19879962 - 19880010
Alignment:
Q  31 caacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  19879962 caacatcaacaacttaagactccaatactttggaacgacaacttacaac 19880010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 37515487 - 37515532
Alignment:
Q  20 aacaacgtagacaacattaacaacttaagactccaatactttggaa 65  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||    
T  37515487 aacaacttagacaacatcaacaacttaagactccaatactttggaa 37515532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 22965763 - 22965811
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatca 142  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  22965763 caacaccatttaaacatatgcatcaaatcaccatcaataataatcatca 22965811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 16799446 - 16799491
Alignment:
Q  20 aacaacgtagacaacattaacaacttaagactccaatactttggaa 65  Q
    |||||| |||||||||| ||||||||||||||| ||||||||||||    
T  16799446 aacaacttagacaacatcaacaacttaagactcaaatactttggaa 16799491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 19808605 - 19808568
Alignment:
Q  63 gaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  19808605 gaaagacaacttacaactttacaacttagaccaacacc 19808568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 26453851 - 26453892
Alignment:
Q  38 aacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  26453851 aacaacgtaagactccaatactttggaacgacaacttacaac 26453892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 22253316 - 22253268
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    |||||||| |||| ||||||||||||||||||||||| |||| ||||||    
T  22253316 gacaacatcaacatcttaagactccaatactttggaacgacatcttaca 22253268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 39936885 - 39936813
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaa 181  Q
    ||||||| ||||||| ||| || ||||||||||  ||||||| ||| ||| ||||||||||| ||||||||||    
T  39936885 atatgcagcaagtcaacattaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaa 39936813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 18302913 - 18302841
Alignment:
Q  29 gacaacattaacaacttaa--gactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    |||||||| |||||||||   ||||||||||||||||||  ||| |||||||| ||  |||||||||||||||    
T  18302913 gacaacatcaacaacttatatgactccaatactttggaacaacatcttacaactttgtaacttagaccaacac 18302841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 19699198 - 19699247
Alignment:
Q  50 ctccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    ||||||||  ||||||  |||||||||||| |||||||||||||||||||    
T  19699198 ctccaatatcttggaataacaacttacaactttacaacttagaccaacac 19699247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 28397511 - 28397560
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagaca 70  Q
    ||||| |||||||||| | ||||||| |||||||||||||||||| ||||    
T  28397511 acaacttagacaacatcatcaacttaggactccaatactttggaacgaca 28397560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 22381883 - 22381835
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    |||||||| || ||||||||||||||||||||||| | |||| ||||||    
T  22381883 gacaacatcaagaacttaagactccaatactttgggacgacatcttaca 22381835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 9320660 - 9320439
Alignment:
Q  1 tacaccacctcttataaacaacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  9320660 tacaccacctcttataaacaacaacgtagacaatattaacaacttaagactccaatattttggaaagacaacttacaactttataacttagaccaacacc 9320561  T
Q  101 atttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacat 200  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9320560 atttagacatatgcaacaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacat 9320461  T
Q  201 ttaatcatcaatattaatcatc 222  Q
    ||||||||||| || |||||||    
T  9320460 ttaatcatcaaaataaatcatc 9320439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 27 - 211
Target Start/End: Original strand, 11084946 - 11085130
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacaccatttagacatatgcaccaagtcacca 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| | |||||||||||||||||  | |||||| ||||||||||    
T  11084946 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaacttgacaccatagaccaacaccatttaatcgtatgcagcaagtcacca 11085045  T
Q  127 tcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11085046 tcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatagtttcacatttaatcatcaa 11085130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 11092680 - 11092868
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacaccatttagacatatgcacca 118  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    ||||||||  ||||||||||||||||||||||||| || |||||| ||    
T  11092680 caacaacttagacaacattaacaacttaagactccaatactttggaaa----acttacaaatttacaacttagaccaacaccatttaaacgtatgcaaca 11092775  T
Q  119 agtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11092776 agtcaccatcaataataatcatcatatataacaattacaatttcatatcaacatctttcacaatatataaatattttcacatttaatcatcaa 11092868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 38480251 - 38480368
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||| | ||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  38480251 caacatcatttaaatatatgcagcaagtcaccatcaataataatcatcatatataacaattacaacttcatatcaacgtctttcacaatatataaatatt 38480350  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  38480351 ttcacatttaatcatcaa 38480368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 30821094 - 30820977
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||| ||||||||| ||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||    
T  30821094 caacatcatttaaacatatgcagcaagttaccatcaataataatcatcatatataacaattacaacttcatatcaacgtatttcacaatatataaatatt 30820995  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  30820994 ttcacatttaatcatcaa 30820977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 36686088 - 36685971
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||  || ||||||||| ||||||||||||||||||||||||    
T  36686088 caacatcatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaattaaaacttcatatcagcgtctttcacaatatataaatatt 36685989  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  36685988 ttcacatttaatcatcaa 36685971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 8940065 - 8940164
Alignment:
Q  1 tacaccacctcttataaacaacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8940065 tacaccacctctaataaacaacaacgtagacaacattaataacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacc 8940164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 15213728 - 15213830
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15213728 atatgcagcaagtcaacatcaataataatcatcatatataacaattacaatttcatatcaatgtctttcacaatatataaatattttcacatttaatcat 15213827  T
Q  209 caa 211  Q
    |||    
T  15213828 caa 15213830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 14981722 - 14981641
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14981722 caacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacc 14981641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 46580962 - 46580881
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  46580962 caacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacc 46580881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 15112777 - 15112858
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15112777 caacaacttagacaacattaacaacttaagattccaatactttggaaagacaacttacaactttacaacttagaccaacacc 15112858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 16323886 - 16323966
Alignment:
Q  20 aacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  16323886 aacaacttagacaacattaacaacttaagattccaatactttggaaagacaactaacaactttacaacttagaccaacacc 16323966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 32161130 - 32161049
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  32161130 caacaacttagataacattaacaacttaagactccaatactttagaaagacaacttacaattttacaacttagaccaacacc 32161049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 15116317 - 15116384
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaa 86  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  15116317 caacaacttagacaatattaacaacttaagattccaatactttggaaagacaacttacaactttacaa 15116384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 32301123 - 32301202
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||| ||||    
T  32301123 acaacttagacaacatcgacaacttaagactccaatactttggaacgacaacttgcaactttacaacttagaccaccacc 32301202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 15439322 - 15439416
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||| |||||||||||||||| ||||||||||||||| ||| |||||||||||  ||||||||   |||| || ||||||||||||||||||||    
T  15439322 caagtaaccatcaataataatcttcatatataacaattacaacttcatatcaacaactttcacatagtatagatcttttcacatttaatcatcaa 15439416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 8468351 - 8468444
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||  ||| ||| ||| ||| ||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  8468351 caagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatctttcacaatatataaatattatcaca-ttaatcatcaa 8468444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 14270241 - 14270148
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||  ||| ||| ||| ||| ||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  14270241 caagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaa 14270148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 45847837 - 45847744
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||  ||| ||| ||| ||| ||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  45847837 caagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaa 45847744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 11392169 - 11392109
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| |||||||||| ||||||||||| |||||||||||||||| |||||||||||||    
T  11392169 caacaacttagacaacatcaacaacttaaggctccaatactttggaacgacaacttacaac 11392109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 14157258 - 14157206
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  14157258 tagacaacattaacaacttaagattccaatactttgcaaagacaacttacaac 14157206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 16550934 - 16550874
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| |||||||||| |||| ||||||||||||||||||||||| |||||||||||||    
T  16550934 caacaacttagacaacatcaacaccttaagactccaatactttggaatgacaacttacaac 16550874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 16614728 - 16614788
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| |||||||||| |||| ||||||||||||||||||||||| |||||||||||||    
T  16614728 caacaacttagacaacatcaacaccttaagactccaatactttggaatgacaacttacaac 16614788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 8468540 - 8468632
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaata-----------ctttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||| |||||||||           |||||||||||||||||||||| ||||||||||||||||||||    
T  8468540 caacaacttagacaacattaacaacttaatactccaatattttggaaacactttggaaagacaacttacaactttacaacttagaccaacacc 8468632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 17232545 - 17232638
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| || ||| ||||||||||  ||| ||| ||| ||| ||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  17232545 caagtcaacagcaacaataatcatctaatacaaccattccaacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaa 17232638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 17232741 - 17232833
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaat-----------actttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||| ||||||||           ||||||||||||||||||||||| ||||||||||||||||||||    
T  17232741 caacaacttagacaacattaacaacttaatactccaatactttggaaacactttggaaagacaacttacaactttacaacttagaccaacacc 17232833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 32301077 - 32301127
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  32301077 gacaacatcaacaacttaagactccaatactttggaacgacaacttacaac 32301127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 37727742 - 37727648
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||| ||| ||| ||| ||| |||||||| ||  |||||||| |||||| || ||||||||||||||||||||    
T  37727742 caagtcaacatcaacaataatcatcaaatacaaccattacaacttcatatctacaactttcacattatatagatcttttcacatttaatcatcaa 37727648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 1490348 - 1490260
Alignment:
Q  22 caacgtagacaacattaacaacttaagactccaatactttggaa----------agacaacttacaacattacaacttagaccaacacc 100  Q
    |||| |||||||||| ||||||||||||||||||||||||||||          |||||||||||||| ||||||||||||||||||||    
T  1490348 caacttagacaacatcaacaacttaagactccaatactttggaacactttggaaagacaacttacaactttacaacttagaccaacacc 1490260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 10501576 - 10501525
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  10501576 tagacaacattaacaacttaagattc-aatactttggaaagacaacttacaac 10501525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 14273338 - 14273429
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaat----------actttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| || |||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||||||||||| ||||||    
T  14273338 caacaacttaaacaacattaacaacttaagactccaatactttggaacactttggaaagacaacttacaactttacaacttagacaaacacc 14273429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 15719819 - 15719910
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactt----------tggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| |||||||||| ||||||||| |||||||||||||          ||||||||||||||||||| ||||||||||||||||||||    
T  15719819 caacaacttagacaacatcaacaacttaggactccaatactttggaacactttggaaagacaacttacaactttacaacttagaccaacacc 15719910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 16461108 - 16461056
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  16461108 tagacaacatcgacaacttaagactccaatactttggaacgacaacttacaac 16461056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 16998416 - 16998507
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaat----------actttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| |||||||||||||||||||||| |||||||          |||||||||| |||||||||||| ||||||||||||||||||||    
T  16998416 caacaacttagacaacattaacaacttaaggctccaatactttggaacactttggaaatacaacttacaactttacaacttagaccaacacc 16998507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 14258319 - 14258365
Alignment:
Q  54 aatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  14258319 aatactttggaatgacaacttacaactttacaacttagaccaacacc 14258365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 16579627 - 16579673
Alignment:
Q  54 aatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  16579627 aatactttggaacgacaacttacaactttacaacttagaccaacacc 16579673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 16586079 - 16585990
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatacttt----------ggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||| |||||||||| ||||||||||||||||||||||||          |||| ||||||||||||| ||||||||||||||||||||    
T  16586079 acaacttagacaacatcaacaacttaagactccaatactttggaatactttggaacgacaacttacaactttacaacttagaccaacacc 16585990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 212
Target Start/End: Complemental strand, 11392001 - 11391897
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattt-tcacatttaatca 207  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||| ||| ||| ||| ||| | | ||||||||||||||||||| |||   |||||||||||    
T  11392001 atatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcttatgagcatctttcacaatatataaatctttcgtacatttaatca 11391902  T
Q  208 tcaat 212  Q
    |||||    
T  11391901 tcaat 11391897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 12371455 - 12371527
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaa 181  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||| ||| ||| ||||||||||| ||||||||||    
T  12371455 atatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaa 12371527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 13148347 - 13148275
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaa 181  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||| ||| ||| ||||||||||| ||||||||||    
T  13148347 atatgcagcaagtcaacatcaacaataatcatctaatataaccattacaacttcatatcaacatctttcacaa 13148275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 16461060 - 16461016
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaa 65  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||    
T  16461060 acaacttagacaacatcaacaacttaagactccaatactttggaa 16461016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 16579584 - 16579628
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaa 65  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||    
T  16579584 acaacttagacaacatcaacaacttaagactccaatactttggaa 16579628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 38519341 - 38519389
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    |||||||| |||||||||||||||||||||||||||| |||| ||||||    
T  38519341 gacaacatcaacaacttaagactccaatactttggaacgacatcttaca 38519389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 16461017 - 16460971
Alignment:
Q  54 aatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||||||    
T  16461017 aatactttggaacgacaacttacaactttacaacttagacaaacacc 16460971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 190
Target Start/End: Complemental strand, 8852040 - 8851959
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaat 190  Q
    |||||||  |||||| |||||| ||||||||||  ||||||| ||| ||| || |||||||  |||||||||||||||||||    
T  8852040 atatgcagtaagtcaacatcaacaataatcatcccatataaccattacaactttatatcaaaatctttcacaatatataaat 8851959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 15411154 - 15411117
Alignment:
Q  63 gaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  15411154 gaaagacaacttacaactttacaacttagaccaacacc 15411117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 170
Target Start/End: Complemental strand, 9389781 - 9389705
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaac 170  Q
    ||||| |||||| |||||| || ||||| ||||||| |||||||| |||| |||| ||||| ||| |||||||||||    
T  9389781 caacatcatttaaacatatacagcaagtaaccatcattaataatcttcatgtatatcaatttcaacttcatatcaac 9389705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 9033507 - 9033457
Alignment:
Q  21 acaacgtagacaacattaa-caacttaagactccaatactttggaaagaca 70  Q
    ||||| |||||||||| || |||||||||||||||||||||||||| ||||    
T  9033507 acaacttagacaacatcaaacaacttaagactccaatactttggaacgaca 9033457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 65
Target Start/End: Original strand, 11661243 - 11661277
Alignment:
Q  31 caacattaacaacttaagactccaatactttggaa 65  Q
    |||||| ||||||||||||||||||||||||||||    
T  11661243 caacatcaacaacttaagactccaatactttggaa 11661277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 14421921 - 14421967
Alignment:
Q  31 caacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    |||||| ||||||||||| |||||||||||||||| |||| ||||||    
T  14421921 caacatcaacaacttaaggctccaatactttggaacgacatcttaca 14421967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 16579538 - 16579588
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||  ||||||||||||||| | ||||||||| |||||||||||||    
T  16579538 gacaacatcgacaacttaagactccgaaactttggaacgacaacttacaac 16579588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 16586125 - 16586075
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||  ||||||||||||||| | ||||||||| |||||||||||||    
T  16586125 gacaacatcgacaacttaagactccgaaactttggaacgacaacttacaac 16586075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 42461921 - 42461966
Alignment:
Q  32 aacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    ||||| ||||||||||||||||||||| |||||| |||| ||||||    
T  42461921 aacatcaacaacttaagactccaatacattggaacgacatcttaca 42461966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 11066645 - 11066717
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaa 181  Q
    ||||||| ||||||| || ||| ||| ||||||  ||||||| ||| ||| ||||||||||| ||||||||||    
T  11066645 atatgcagcaagtcaacaacaacaatgatcatccaatataactattacaacttcatatcaacatctttcacaa 11066717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 16185960 - 16185996
Alignment:
Q  57 actttggaaagacaacttacaacattacaacttagac 93  Q
    |||||||||||| |||||||||| |||||||||||||    
T  16185960 actttggaaagataacttacaactttacaacttagac 16185996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 41284143 - 41284171
Alignment:
Q  27 tagacaacattaacaacttaagactccaa 55  Q
    |||||||||||||||||||||||||||||    
T  41284143 tagacaacattaacaacttaagactccaa 41284171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 183; Significance: 4e-99; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 24212289 - 24212499
Alignment:
Q  1 tacaccacctcttataaacaacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |    
T  24212289 tacaccacctcttataaacaacaacgtagacaacattaacaacttaagactccaatactttgaaaagacaacttacaactttacaacttagaccaacatc 24212388  T
Q  101 atttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacat 200  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  24212389 atttagacatatgcagcaagtcaccatcaatattaatcatcatatataacaattacaacttcatatcaacgtctttcacaatatataaatattttcacat 24212488  T
Q  201 ttaatcatcaa 211  Q
    |||||||||||    
T  24212489 ttaatcatcaa 24212499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 35852544 - 35852754
Alignment:
Q  1 tacaccacctcttataaacaacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||    
T  35852544 tacaccacctcttataaacaacaacgtagacaacattaacaacttaagactccaatactttgaaaagacaacttacaactttacaaattagaccaacacc 35852643  T
Q  101 atttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacat 200  Q
    ||||||||||||||| |||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  35852644 atttagacatatgcagcaagccaccatcaataataatcatcgtatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacat 35852743  T
Q  201 ttaatcatcaa 211  Q
    |||||||||||    
T  35852744 ttaatcatcaa 35852754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 21557883 - 21557766
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||| ||||||||| |||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  21557883 caacatcatttaaacatatgcagcaagtcactatcaataataatcatcatatataacaattacaacttcatatcaacgtctttcacaatatataaatatt 21557784  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  21557783 ttcacatttaatcatcaa 21557766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 100 - 211
Target Start/End: Complemental strand, 12122353 - 12122242
Alignment:
Q  100 catttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcaca 199  Q
    |||||| ||||||||  |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  12122353 catttaaacatatgccgcaagtcaccatcaataataatcatcatatataacaattacaacttcatatcaacgtctttcacaatatataaatattttcaca 12122254  T
Q  200 tttaatcatcaa 211  Q
    ||||||||||||    
T  12122253 tttaatcatcaa 12122242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 21555217 - 21555100
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||||||||    
T  21555217 caacatcatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaattacaactttatgtcaacgtctttcacaatatataaatatt 21555118  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  21555117 ttcacatttaatcatcaa 21555100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 36460199 - 36460301
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36460199 atatgcagcaagtcaacattaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 36460298  T
Q  209 caa 211  Q
    |||    
T  36460299 caa 36460301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 31455704 - 31455824
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatca---tcatatataacaattgcaatttcatatcaacgtctttcacaatatataaat 190  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||||   |||| |||||| ||| ||| ||||||||||||| |||||||||||||||||    
T  31455704 caacatcatttaaacatatgcagcaagtcaccatcaataataatcaatatcatttataacgattacaacttcatatcaacgtttttcacaatatataaat 31455803  T
Q  191 attttcacatttaatcatcaa 211  Q
    |||||||||||||||||||||    
T  31455804 attttcacatttaatcatcaa 31455824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 102 - 208
Target Start/End: Original strand, 30615778 - 30615883
Alignment:
Q  102 tttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatt 201  Q
    |||| ||||||||| ||||||||||||| ||||||||||||  |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||    
T  30615778 tttaaacatatgcagcaagtcaccatcattaataatcatcaattataacaattacaacttcatatcaacgtctttcacaatatat-aatattttcacatt 30615876  T
Q  202 taatcat 208  Q
    |||||||    
T  30615877 taatcat 30615883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 31455091 - 31455211
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatca---tcatatataacaattgcaatttcatatcaacgtctttcacaatatataaat 190  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||||   |||| |||||| ||| ||| || |||||||||| |||||||||||||||||    
T  31455091 caacatcatttaaacatatgcatcaagtcaccatcaataataatcaatatcatttataacgattacaacttaatatcaacgtttttcacaatatataaat 31455190  T
Q  191 attttcacatttaatcatcaa 211  Q
    |||||||||||||||||||||    
T  31455191 attttcacatttaatcatcaa 31455211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 29447838 - 29447918
Alignment:
Q  20 aacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29447838 aacaacttagacaacatcaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacc 29447918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 5889250 - 5889133
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||| |||||| || ||||| |||||||||||||||| |||| |||||||||||||| | |||||||||  |||||||| |||||| || ||    
T  5889250 caacatcatttaaacatatacagcaagtaaccatcaataataatcttcatgtataacaattgcaactacatatcaacaactttcacattatatagatctt 5889151  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  5889150 ttcacatttaatcatcaa 5889133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 22107713 - 22107640
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  22107713 tagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaacacc 22107640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 192
Target Start/End: Original strand, 17875234 - 17875326
Alignment:
Q  100 catttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatat 192  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||  || |||||||||||    
T  17875234 catttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaattagaacttcatatcaacgtctttatcattatataaatat 17875326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 41861624 - 41861544
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||| ||||||||||||    
T  41861624 caacaacttagacaacattaacaacttaagattccaatactttggaaagacaacttacaattttacaaattagaccaacac 41861544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 262981 - 263055
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagacc 94  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  262981 caacaacttagacaac-ttaacaacttaagactccaatactttggaaagacaacttacatttttacaacttagacc 263055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 5889372 - 5889279
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||| ||| ||| ||| ||| ||||||||| | |||||||||||||||||||||| ||||| |||||||||||    
T  5889372 caagtcatcatcaacaataatcatcaaatacaaccattacaacttcatatcagcatctttcacaatatataaatattctcaca-ttaatcatcaa 5889279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 29915270 - 29915177
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||  ||| ||| ||| ||| ||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  29915270 caagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaa 29915177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 17010847 - 17010907
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||| | |||||||||||    
T  17010847 caacaacttagacaacatcaacaacttaagactccaatactttggaacggcaacttacaac 17010907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 19076343 - 19076403
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  19076343 caacaacttaaacaacattaacaacttaagactccaatactttggaaaaacaatttacaac 19076403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 33895912 - 33895855
Alignment:
Q  39 acaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaa 96  Q
    |||||||||||||||||||||||||||  ||||||||| || ||||||||||||||||    
T  33895912 acaacttaagactccaatactttggaacaacaacttacgactttacaacttagaccaa 33895855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 6765700 - 6765742
Alignment:
Q  57 actttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  6765700 actttggaaagacaacttacaactttacaacttagaccaacac 6765742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 23469770 - 23469820
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    |||||||||| |||||||||||||||||| ||||||||| |||| ||||||    
T  23469770 tagacaacatcaacaacttaagactccaacactttggaacgacatcttaca 23469820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 25250841 - 25250762
Alignment:
Q  21 acaacgtagacaacattaacaacttaa--gactccaatactttggaaagacaacttacaacattacaacttagaccaaca 98  Q
    ||||| |||||||| | |||||||||   ||||||||||  ||||||  |||||||||||| ||||||||||||||||||    
T  25250841 acaacttagacaacttcaacaacttatatgactccaatatcttggaacaacaacttacaactttacaacttagaccaaca 25250762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 25314626 - 25314547
Alignment:
Q  21 acaacgtagacaacattaacaacttaa--gactccaatactttggaaagacaacttacaacattacaacttagaccaaca 98  Q
    ||||| |||||||| | |||||||||   ||||||||||  ||||||  |||||||||||| ||||||||||||||||||    
T  25314626 acaacttagacaacttcaacaacttatatgactccaatatcttggaacaacaacttacaactttacaacttagaccaaca 25314547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 24212504 - 24212546
Alignment:
Q  203 aatcatcaatattaatcatcctaacatcttctctctgcttctc 245  Q
    |||||||||||||||||||| |||||||||||||  |||||||    
T  24212504 aatcatcaatattaatcatcttaacatcttctcttggcttctc 24212546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 21741738 - 21741653
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaa-tatataaatatt 193  Q
    ||||||| ||||||| |||||| ||||||| ||| ||| ||| ||| | ||||||||| | | |||||||||| ||||||||||||    
T  21741738 atatgcagcaagtcaacatcaacaataatcgtcaaatacaaccattacgatttcatataagcatctttcacaattatataaatatt 21741653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 35852759 - 35852792
Alignment:
Q  203 aatcatcaatattaatcatcctaacatcttctct 236  Q
    |||||||||||||||||||| |||||||||||||    
T  35852759 aatcatcaatattaatcatcttaacatcttctct 35852792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 21871763 - 21871687
Alignment:
Q  112 tgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataa 188  Q
    |||| ||||||| |||||| ||||||||||| ||| ||  ||| ||| ||||||||| | || ||||||||||||||    
T  21871763 tgcagcaagtcaacatcaacaataatcatcaaatacaatcattacaacttcatatcatcatcattcacaatatataa 21871687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 21876043 - 21875967
Alignment:
Q  112 tgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataa 188  Q
    |||| ||||||| |||||| ||||||||||| ||| ||  ||| ||| ||||||||| | || ||||||||||||||    
T  21876043 tgcagcaagtcaacatcaacaataatcatcaaatacaatcattacaacttcatatcatcatcattcacaatatataa 21875967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Complemental strand, 31252830 - 31252802
Alignment:
Q  27 tagacaacattaacaacttaagactccaa 55  Q
    |||||||||||||||||||||||||||||    
T  31252830 tagacaacattaacaacttaagactccaa 31252802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 183; Significance: 4e-99; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 6808058 - 6808268
Alignment:
Q  1 tacaccacctcttataaacaacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6808058 tacaccacctcttataaacaacaacgtagacaacattaacaacttaagacttcaatactttggaaagacaacttacaactttacaacttagaccaacacc 6808157  T
Q  101 atttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacat 200  Q
    ||||||||||||| |  ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6808158 atttagacatatgaaggaagtcaccatcaataataatcattatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacat 6808257  T
Q  201 ttaatcatcaa 211  Q
    |||||||||||    
T  6808258 ttaatcatcaa 6808268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 31415418 - 31415535
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  31415418 caacatcatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaattacaacttcatatcaacgtctttcacaatatataaatatt 31415517  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  31415518 ttcacatttaatcatcaa 31415535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 31224792 - 31224675
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||    
T  31224792 caacatcatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaattacaacttcatatcaacgtctttcacattatataaatatt 31224693  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  31224692 ttcacatttaatcatcaa 31224675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 11912950 - 11913052
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11912950 atatgcatcaagtcaacatcaataataataatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 11913049  T
Q  209 caa 211  Q
    |||    
T  11913050 caa 11913052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 15447835 - 15447721
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||||||   ||||||||||| ||| ||||||||||||||||||||| ||||| ||||||    
T  15447835 caacatcatttaaacatatgcatcaagtcaccatcaataataatcat---atataacaattacaacttcatatcaacgtctttcacattatatgaatatt 15447739  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  15447738 ttcacatttaatcatcaa 15447721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 52990009 - 52989928
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  52990009 caacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacc 52989928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 11914301 - 11914222
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11914301 acaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacc 11914222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 49970075 - 49969973
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||||| |||||| ||||||||||| ||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  49970075 atatgcagcaagtcaacatcaacaataatcatcaaatataaccattacaacttcatatcaacatctttcacaatatataaatattttcacatttaatcat 49969976  T
Q  209 caa 211  Q
    |||    
T  49969975 caa 49969973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 24513774 - 24513855
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  24513774 caacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttaccacttagaccaacacc 24513855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 14966002 - 14966083
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||    
T  14966002 caacaacttagacaacattgacaacttaagactccaatactttggaaagtaaacttacaactttacaacttagaccaacacc 14966083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 24178809 - 24178728
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  24178809 caacaacttagacaacatcaacaccttaagactccaatactttggaaagacaacttacaactttacaacttaaaccaacacc 24178728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 324070 - 324149
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  324070 acaacttagacaacatcgacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaacacc 324149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 12469736 - 12469815
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||| |||||||||| |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||    
T  12469736 acaacttagacaacatcaacaacttaagactccaatacttttgaacgacaacttacaactttacaacttagaccaacacc 12469815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 43889911 - 43889832
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||| |||| ||||| |||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  43889911 acaacttagataacatcaacaacttaagactccaatactttggaacgacaacttacaattttacaacttagaccaacacc 43889832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 22651977 - 22652034
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttac 76  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22651977 caacaacttagacaacattaacaatttaagactccaatactttggaaagacaacttac 22652034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 49389867 - 49389772
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatata--taaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||| ||||||||||| ||| |||||||||||  | |||||||||||  ||||||||||||||||||||||||||    
T  49389867 caagtcaacatcaacaataatcatcaaatataacaattacaacttcatatcaacaac-ttcacaatatatctaaatattttcacatttaatcatcaa 49389772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 3265169 - 3265117
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3265169 tagacaacattaacaacttaagattccaatactttggaaagacaacttacaac 3265117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 16796327 - 16796387
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  16796327 caacaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaac 16796387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 35961818 - 35961758
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  35961818 caacaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaac 35961758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 36527710 - 36527762
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36527710 tagacaacattaacaacttaagattccaatactttggaaagacaacttacaac 36527762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 1989047 - 1988953
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||| ||| ||| ||| ||| |||||||||||  |||||||| |||||| || ||||||||||||||||||||    
T  1989047 caagtcaacatcaacaataatcatcaaatacaaccattacaacttcatatcaacaactttcacattatatagatcttttcacatttaatcatcaa 1988953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 40812015 - 40812096
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaat 190  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||| ||| ||| ||||||||||| |||||||||||||||||||    
T  40812015 atatgcagcaagtcaacatcaacaataatcatcccatataaccattacaacttcatatcaacatctttcacaatatataaat 40812096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 17692005 - 17691914
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatacttt----------ggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||          |||||||||||||||||| |||||||||||| |||||||    
T  17692005 caacaacttagacaacattaacaacttaagactccaatactttggaacactttggaaagacaacttacaactttacaacttagatcaacacc 17691914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 20630294 - 20630210
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatt 201  Q
    ||||||| |||||| ||||||||||  ||| ||| ||| ||| ||||||||||| |||||||||||||||||||||| |||||||    
T  20630294 caagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatctttcacaatatataaatattctcacatt 20630210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 10542552 - 10542494
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||| |||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  10542552 acaacttagacaacatcaacaacttaagactccagtactttggaacgacaacttacaac 10542494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 5841790 - 5841850
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| || ||||||| ||||||||||| |||||||||||||||| |||||||||||||    
T  5841790 caacaacttatacaacatcaacaacttaaggctccaatactttggaacgacaacttacaac 5841850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 5841958 - 5842062
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattt-tcacatttaatca 207  Q
    ||||||| ||||||| |||||| ||||||||||| ||||||| ||| ||| ||| ||| | | ||||||||||||||||||| |||   |||||||||||    
T  5841958 atatgcagcaagtcaacatcaacaataatcatcaaatataaccattacaacttcttatgagcatctttcacaatatataaatctttcgtacatttaatca 5842057  T
Q  208 tcaat 212  Q
    |||||    
T  5842058 tcaat 5842062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 17685816 - 17685725
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatacttt----------ggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||          |||||||||||||||||| |||||||||||| |||||||    
T  17685816 caacaacttagataacattaacaacttaagactccaatactttggaacactttggaaagacaacttacaactttacaacttagatcaacacc 17685725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 170
Target Start/End: Complemental strand, 18439921 - 18439845
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaac 170  Q
    ||||| |||||| |||||| || ||||| |||||||||||||||| |||||||||||| |||||| | |||||||||    
T  18439921 caacatcatttaaacatatacaacaagtaaccatcaataataatcttcatatataacatttgcaactacatatcaac 18439845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 100
Target Start/End: Original strand, 17046182 - 17046225
Alignment:
Q  57 actttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  17046182 actttggaaagacaacttacaactttacaacttagaccaacacc 17046225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 211
Target Start/End: Complemental strand, 18440041 - 18439951
Alignment:
Q  120 gtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    |||| |||||| ||||||||||| ||| ||| ||| ||| ||||||||| | |||||||||||||||| ||||| ||||| |||||||||||    
T  18440041 gtcatcatcaacaataatcatcaaatacaaccattacaacttcatatcatcatctttcacaatatatagatattctcaca-ttaatcatcaa 18439951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 324024 - 324074
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  324024 gacaacatcgacaacttaagactccaatactttggaacgacaacttacaac 324074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 12269486 - 12269587
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| || |||| |||||| ||||||||||| ||||||  ||| ||| |||||||||||||| |||| ||| ||||||| || ||||| ||||||||    
T  12269486 atatgcagcacgtcaacatcaacaataatcatcaaatataatcattacaacttcatatcaacgtccttcaaaatttataaatcttctcaca-ttaatcat 12269584  T
Q  209 caa 211  Q
    |||    
T  12269585 caa 12269587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 43889957 - 43889907
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  43889957 gacaacatcgacaacttaagactccaatactttggaacgacaacttacaac 43889907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 194
Target Start/End: Complemental strand, 30175381 - 30175304
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattt 194  Q
    ||||||| |||||| ||||||||||  ||||| | ||| ||| ||||||||||| ||||||||| |||||||||||||    
T  30175381 caagtcaacatcaacaataatcatcccatatatccattacaacttcatatcaacatctttcacagtatataaatattt 30175304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 18700602 - 18700558
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaa 65  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||    
T  18700602 acaacttagacaacatcaacaacttaagactccaatactttggaa 18700558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 40807173 - 40807245
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaa 181  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||| ||| ||| ||||||||||| ||||||||||    
T  40807173 atatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaa 40807245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 54876687 - 54876596
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaata----------ctttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||||  |||||||||||||||||||||||| |||||          |||||||||||||||||||||| |||||||||||| |||||||    
T  54876687 caacaactcagacaacattaacaacttaagacttcaatattttggaacactttggaaagacaacttacaactttacaacttagatcaacacc 54876596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 98
Target Start/End: Original strand, 21837298 - 21837337
Alignment:
Q  59 tttggaaagacaacttacaacattacaacttagaccaaca 98  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  21837298 tttggaaagacaacttacaactttacaacttagaccaaca 21837337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 32403120 - 32403061
Alignment:
Q  20 aacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    |||||| |||||||||| |||||||||||| ||||| ||||||||| |||| ||||||||    
T  32403120 aacaacttagacaacatcaacaacttaagaatccaacactttggaacgacatcttacaac 32403061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 10542598 - 10542548
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||  |||||||||||||||||||||||||||  ||||||||||||    
T  10542598 gacaacatcgacaacttaagactccaatactttggaacaacaacttacaac 10542548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 12469690 - 12469740
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||  ||||||||||||||||||| ||||||| |||||||||||||    
T  12469690 gacaacatcgacaacttaagactccaataatttggaacgacaacttacaac 12469740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 18700559 - 18700513
Alignment:
Q  54 aatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||||||||| ||||||||||||| |||||||||||| |||||||    
T  18700559 aatactttggaacgacaacttacaactttacaacttagatcaacacc 18700513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 18700648 - 18700598
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||  ||||||||||| ||||||||||||||| |||||||||||||    
T  18700648 gacaacatcgacaacttaagattccaatactttggaacgacaacttacaac 18700598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 15245979 - 15246032
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagacaactt 74  Q
    ||||| |||||||||| | ||||||| |||||||||||||||||| ||||||||    
T  15245979 acaacttagacaacatcatcaacttaggactccaatactttggaacgacaactt 15246032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 15265100 - 15265153
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagacaactt 74  Q
    ||||| |||||||||| | ||||||| |||||||||||||||||| ||||||||    
T  15265100 acaacttagacaacatcatcaacttaggactccaatactttggaatgacaactt 15265153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 45220454 - 45220417
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaat 56  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  45220454 caacaacttagacaacattaacaacttaagactccaat 45220417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 170
Target Start/End: Complemental strand, 1465495 - 1465419
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaac 170  Q
    ||||| |||||| ||||||  | ||||| ||||||| |||||||| |||| |||||||||| ||| |||||||||||    
T  1465495 caacatcatttaaacatatagagcaagtaaccatcattaataatcttcatgtataacaatttcaacttcatatcaac 1465419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 9577586 - 9577630
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaa 65  Q
    ||||| |||||||||| |||||||||||||||||| |||||||||    
T  9577586 acaacttagacaacatcaacaacttaagactccaacactttggaa 9577630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 10834251 - 10834207
Alignment:
Q  33 acattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||    
T  10834251 acatcaacaacttaagactccaatactttggaacgacatcttaca 10834207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 22307458 - 22307386
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaa 181  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||  ||| ||| ||||||||||| ||||||||||    
T  22307458 atatgcagcaagtcaacatcaacaataatcatccaatataatcattacaacttcatatcaacatctttcacaa 22307386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 195
Target Start/End: Original strand, 12269623 - 12269718
Alignment:
Q  100 catttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatttt 195  Q
    |||||| |||||| || ||||| |||| | |||||| || |||||| ||| || | ||| |||||||||||  |||||||||||||||||| ||||    
T  12269623 catttaaacatatacaacaagtaaccaccgataatattcttcatatgtaaaaaatacaacttcatatcaacaactttcacaatatataaatctttt 12269718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 42325143 - 42325093
Alignment:
Q  49 actccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    |||||||||  ||||||  |||||||||||| |||||||||||||||||||    
T  42325143 actccaatatcttggaataacaacttacaactttacaacttagaccaacac 42325093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 49970200 - 49970130
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaacat-tacaacttagaccaaca 98  Q
    ||||||||||||||||||| | ||||||||||||||   ||| |||||||| |  ||||||||||||||||    
T  49970200 gacaacattaacaacttaaaattccaatactttggatcaacatcttacaacttaaacaacttagaccaaca 49970130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 15206897 - 15206950
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagacaactt 74  Q
    ||||| ||||||| || | ||||||| |||||||||||||||||| ||||||||    
T  15206897 acaacttagacaaaatcatcaacttaggactccaatactttggaacgacaactt 15206950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 6158529 - 6158577
Alignment:
Q  51 tccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    |||||||  ||||||  |||||||||||| |||||||||||||||||||    
T  6158529 tccaatatcttggaataacaacttacaactttacaacttagaccaacac 6158577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 14251035 - 14250987
Alignment:
Q  51 tccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    |||||||  ||||||  |||||||||||| |||||||||||||||||||    
T  14251035 tccaatatcttggaataacaacttacaaccttacaacttagaccaacac 14250987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 14642470 - 14642422
Alignment:
Q  51 tccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    |||||||  ||||||  |||||||||||| |||||||||||||||||||    
T  14642470 tccaatatcttggaataacaacttacaactttacaacttagaccaacac 14642422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 17538284 - 17538356
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaa 181  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||  | | ||| ||||||||||| ||||||||||    
T  17538284 atatgcagcaagtcaacatcaacaataatcatccaatataatcaatacaacttcatatcaacatctttcacaa 17538356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 37037950 - 37037998
Alignment:
Q  51 tccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    |||||||  ||||||  |||||||||||| |||||||||||||||||||    
T  37037950 tccaatatcttggaataacaacttacaactttacaacttagaccaacac 37037998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 180; Significance: 3e-97; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 22420887 - 22421098
Alignment:
Q  1 tacaccacctcttata-aacaacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    |||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22420887 tacaccacctcttattgaacaacaacgtagacatcattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacac 22420986  T
Q  100 catttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcaca 199  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22420987 catttagacatatgcaacaagtcactatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcaca 22421086  T
Q  200 tttaatcatcaa 211  Q
    ||||||||||||    
T  22421087 tttaatcatcaa 22421098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 6 - 211
Target Start/End: Original strand, 2201044 - 2201250
Alignment:
Q  6 cacctcttata-aacaacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacaccattt 104  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2201044 cacctcttatagaacaacaacgtaaacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacaccattt 2201143  T
Q  105 agacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaa 204  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2201144 agacatatgcagcaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcatatttaa 2201243  T
Q  205 tcatcaa 211  Q
    |||||||    
T  2201244 tcatcaa 2201250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 20734285 - 20734168
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20734285 caacaccatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatt 20734186  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  20734185 ttcacatttaatcatcaa 20734168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 34297092 - 34296990
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34297092 atatgcagcaagtcaacattaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatctaatcat 34296993  T
Q  209 caa 211  Q
    |||    
T  34296992 caa 34296990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 27851215 - 27851333
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaa-ttgcaatttcatatcaacgtctttcacaatatataaatat 192  Q
    ||||| |||||| |||||  || ||||| |||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  27851215 caacatcatttaaacatacacaacaagtaaccatcaataataatcttcatatataacaaattacaatttcatatcaacgtctttcacaatatataaatat 27851314  T
Q  193 tttcacatttaatcatcaa 211  Q
    |||||||||||||||||||    
T  27851315 tttcacatttaatcatcaa 27851333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 17378084 - 17378003
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17378084 caacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacc 17378003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 19399787 - 19399889
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||||| |||||| ||||||||||| ||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  19399787 atatgcagcaagtcaacatcaacaataatcatcaaatataaccattacaacttcatatcaacatctttcacaatatataaatattttcacatttaatcat 19399886  T
Q  209 caa 211  Q
    |||    
T  19399887 caa 19399889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 18927740 - 18927811
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaaca 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18927740 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaaca 18927811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 25956695 - 25956578
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||| |||||| || ||||| |||||||||||||||| |||||||||||| |||||| | |||||||||  |||||||| |||||| || ||    
T  25956695 caacatcatttaaacatatacagcaagtaaccatcaataataatcttcatatataacatttgcaactccatatcaacaactttcacattatatagatctt 25956596  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  25956595 ttcacatttaatcatcaa 25956578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 28104178 - 28104104
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattac-aacttagaccaacacc 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  28104178 tagacaacattaacaacttaagactcaaatactttggaaagacaacttacaactttacaaacttagaccaacacc 28104104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 18927853 - 18927954
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||| ||| ||| ||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  18927853 atatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatataaat-ctttcacatttaatcat 18927951  T
Q  209 caa 211  Q
    |||    
T  18927952 caa 18927954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 19656289 - 19656219
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||    
T  19656289 gacaacatcaacaacttaagactccaatactttggaatgacaacttacaactttacaactttgaccaacac 19656219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 15817785 - 15817725
Alignment:
Q  40 caacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  15817785 caacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaacacc 15817725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 15875217 - 15875297
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    ||||||| |||| |||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||| |||||||||||    
T  15875217 caacaacttagataacattaacaacttaaaactccgatactttggaaagacaacttacaattttacaacatagaccaacac 15875297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 29 - 100
Target Start/End: Complemental strand, 15705720 - 15705649
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||||  |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  15705720 gacaacatcgacaatttaagactccaatactttggaacgacaacttacaactttacaacttagaccaacacc 15705649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 17743219 - 17743292
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| | |||| || |||||||||||||||||    
T  17743219 tagacaacatcaacaacttaagactccaatactttggaacgacaacctgcaactttgcaacttagaccaacacc 17743292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 15174385 - 15174325
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  15174385 caacaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaac 15174325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 18913778 - 18913838
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  18913778 caacaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaac 18913838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 18937036 - 18937096
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  18937036 caacaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaac 18937096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 25956818 - 25956725
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||| ||| ||| ||| ||| ||||||||| | |||||||||||||||||||||| ||||| |||||||||||    
T  25956818 caagtcatcatcaacaataatcatcaaatacaaccattacaacttcatatcagcatctttcacaatatataaatattctcaca-ttaatcatcaa 25956725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 31630724 - 31630631
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||  ||| ||| |||  || ||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  31630724 caagtcaacatcaacaataatcatctaatacaaccattataacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaa 31630631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 20182697 - 20182765
Alignment:
Q  29 gacaacattaacaactta--agactccaatactttggaaagacaacttacaacattacaacttagacca 95  Q
    |||||||| |||||||||  ||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  20182697 gacaacatcaacaacttataagactccaatactttggaacgacaactaacaactttacaacttagacca 20182765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 22153294 - 22153226
Alignment:
Q  29 gacaacattaacaactta--agactccaatactttggaaagacaacttacaacattacaacttagacca 95  Q
    |||||||| |||||||||  ||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  22153294 gacaacatcaacaacttataagactccaatactttggaacgacaactaacaactttacaacttagacca 22153226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 28708483 - 28708543
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| || ||||||| ||||||||||| |||||||||||||||| |||||||||||||    
T  28708483 caacaacttatacaacatcaacaacttaaggctccaatactttggaacgacaacttacaac 28708543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 22805758 - 22805847
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatac----------tttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||| |||||||||| |||||||||||||||||||||          ||||||| ||||||||||||| ||||||||||||||||||||    
T  22805758 acaacttagacaacatcaacaacttaagactccaatactttgggatactttggaatgacaacttacaactttacaacttagaccaacacc 22805847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 17105737 - 17105774
Alignment:
Q  42 acttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17105737 acttaagactccaatactttggaaagacaacttacaac 17105774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 19829893 - 19829821
Alignment:
Q  29 gacaacattaacaacttaa--gactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    |||||||| |||||||||   ||||||||||||||||||  ||| |||||||| |||||||||||||||||||    
T  19829893 gacaacatcaacaacttatatgactccaatactttggaacaacatcttacaactttacaacttagaccaacac 19829821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 201
Target Start/End: Original strand, 27851087 - 27851176
Alignment:
Q  112 tgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatt 201  Q
    |||| ||||||| |||| | ||||||||||| ||| ||| | | ||| ||||||||| | |||||||||||||||||||||| |||||||    
T  27851087 tgcagcaagtcaacatcgacaataatcatcaaatacaaccaatacaacttcatatcagcatctttcacaatatataaatattctcacatt 27851176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 20078330 - 20078274
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    ||||| |||||||||| ||||||||||||||||| |||||||||| |||| ||||||    
T  20078330 acaacttagacaacatcaacaacttaagactccagtactttggaacgacatcttaca 20078274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 27322293 - 27322221
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaa 181  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||| ||| ||| ||||||||||| ||||||||||    
T  27322293 atatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaa 27322221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 28708651 - 28708755
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattt-tcacatttaatca 207  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||| ||| ||| ||| ||| | | ||||||||||||||||||| |||   |||||||||||    
T  28708651 atatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcttatgagcatctttcacaatatataaatctttcgtacatttaatca 28708750  T
Q  208 tcaat 212  Q
    |||||    
T  28708751 tcaat 28708755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 19773827 - 19773784
Alignment:
Q  22 caacgtagacaacattaacaacttaagactccaatactttggaa 65  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  19773827 caacttagacaacatcaacaacttaagactccaatactttggaa 19773784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 17743167 - 17743213
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaactta 75  Q
    ||||||||  ||||||||||||||||||||||||||| |||||||||    
T  17743167 gacaacatcgacaacttaagactccaatactttggaacgacaactta 17743213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 27573153 - 27573095
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||| |||||||| | || ||||||||||||||||||||||||| ||||||| |||||    
T  27573153 acaacttagacaacgtcaataacttaagactccaatactttggaacgacaactcacaac 27573095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 27573207 - 27573149
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||| |||||||||| ||||||||||||||| |||||||||||| |||| || |||||    
T  27573207 acaacttagacaacatcaacaacttaagactcaaatactttggaacgacagctcacaac 27573149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 23083224 - 23083152
Alignment:
Q  29 gacaacattaacaacttaa--gactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    |||||||| |||||||||   |||||||||||||||||| |||| |||||||| ||  |||||||||||||||    
T  23083224 gacaacatcaacaacttatatgactccaatactttggaacgacatcttacaactttgtaacttagaccaacac 23083152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 18453151 - 18453199
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    |||||||| ||||||||||||||||||||||||| || |||| ||||||    
T  18453151 gacaacatcaacaacttaagactccaatactttgaaacgacatcttaca 18453199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 18708677 - 18708749
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaa 181  Q
    ||||||| ||||||| ||| || ||||||||||  ||||||| ||| ||| ||||||||||| ||||||||||    
T  18708677 atatgcagcaagtcaacataaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaa 18708749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 23151141 - 23151069
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaa 181  Q
    ||||||| ||||||| ||| || ||||||||||  ||||||| ||| ||| ||||||||||| ||||||||||    
T  23151141 atatgcagcaagtcaacattaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaa 23151069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 2201255 - 2201296
Alignment:
Q  203 aatcatcaatattaatcatcctaacatcttctctctgcttctc 245  Q
    |||||||||||||||||||| ||||||||||||| ||||||||    
T  2201255 aatcatcaatattaatcatcttaacatcttctct-tgcttctc 2201296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 18260156 - 18260087
Alignment:
Q  29 gacaacattaacaacttaa--gactccaatactttggaaagacaacttacaacattacaacttagaccaa 96  Q
    |||||||| |||||||||   ||||||||||||||||||  |||||||||||| || |||||||| ||||    
T  18260156 gacaacatcaacaacttatatgactccaatactttggaacaacaacttacaactttgcaacttaggccaa 18260087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 19399662 - 19399732
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaacat-tacaacttagaccaaca 98  Q
    ||||||||||||||||||| | ||||||||||||||   ||| |||||||| |  ||||||||||||||||    
T  19399662 gacaacattaacaacttaaaattccaatactttggatcaacatcttacaacttaaacaacttagaccaaca 19399732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 27573253 - 27573203
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||  ||| ||||||||||||||||||||||| || ||||||||||    
T  27573253 gacaacatcgacatcttaagactccaatactttggaacgaaaacttacaac 27573203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 15687949 - 15687912
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaat 56  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  15687949 caacaacttagataacattaacaacttaagactccaat 15687912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 23838146 - 23838179
Alignment:
Q  31 caacattaacaacttaagactccaatactttgga 64  Q
    |||||| |||||||||||||||||||||||||||    
T  23838146 caacatcaacaacttaagactccaatactttgga 23838179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Complemental strand, 19953222 - 19953194
Alignment:
Q  27 tagacaacattaacaacttaagactccaa 55  Q
    |||||||||||||||||||||||||||||    
T  19953222 tagacaacattaacaacttaagactccaa 19953194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 27573099 - 27573027
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagac 93  Q
    ||||| |||||||| | || || |||||||||||||||||||||   ||| |||||||| | |||||||||||    
T  27573099 acaacttagacaacgtcaataatttaagactccaatactttggatcaacatcttacaacttcacaacttagac 27573027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 8e-76; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 44 - 211
Target Start/End: Original strand, 15880661 - 15880828
Alignment:
Q  44 ttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacaccatttagacatatgcaccaagtcaccatcaataataatcatcat 143  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||    
T  15880661 ttaagactccaatactttggaaagacaacttacaactttacaacttagacctacaccatttagacatatgtagcaagtcaccatcaataataatcatcat 15880760  T
Q  144 atataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15880761 atataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaataatcaa 15880828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 100 - 211
Target Start/End: Original strand, 33186122 - 33186233
Alignment:
Q  100 catttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcaca 199  Q
    |||||| ||| ||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  33186122 catttaaacaaatgcagcaagtcaccatcaataataatcatcatatataacaattacaacttcatatcaacgtctttcataatatataaatattttcaca 33186221  T
Q  200 tttaatcatcaa 211  Q
    ||||||||||||    
T  33186222 tttaatcatcaa 33186233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 14746869 - 14746789
Alignment:
Q  20 aacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  14746869 aacaacttagacaacattaacaacttaagactccaatactttggaaagaaaacttacaactttacaacttagaccaacacc 14746789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 9923213 - 9923284
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaaca 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9923213 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaaca 9923284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 13844586 - 13844703
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||| |||||| || ||||| |||||||||||||||| |||||||||||| |||||| | |||||||||  |||||||| |||||| |||||    
T  13844586 caacatcatttaaacatatacaacaagtaaccatcaataataatcttcatatataacatttgcaactccatatcaacaactttcacattatatagatatt 13844685  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  13844686 ttcacatttaatcatcaa 13844703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 17048421 - 17048340
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  17048421 caacaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactttacaacttagaccaacacc 17048340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 26013315 - 26013394
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaaca 98  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||    
T  26013315 caacaacttagacaacattaacaacttaagaatccaatactttggaaagacaacttacaactttacaacttaaaccaaca 26013394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 13592212 - 13592131
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||    
T  13592212 caacaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaactctacaacttagaccaacacc 13592131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 11479646 - 11479575
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaaca 98  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||    
T  11479646 tagacaacattaacaacttaagactccaatactttagagagacaacttacaactttacaacttagaccaaca 11479575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 53631533 - 53631463
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  53631533 gacaacatcaacaacttaagactccaatactttggaatgacaacttacaactttacaacttagaccaacac 53631463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 9923326 - 9923427
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||| ||| ||| ||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  9923326 atatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatataaat-ctttcacatttaatcat 9923424  T
Q  209 caa 211  Q
    |||    
T  9923425 caa 9923427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 11479533 - 11479432
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||| ||| ||| ||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  11479533 atatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatataaat-ctttcacatttaatcat 11479435  T
Q  209 caa 211  Q
    |||    
T  11479434 caa 11479432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 35812312 - 35812211
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||| ||| ||| ||||||||||| |||||||||||||||||||  || |||||||||||||    
T  35812312 atatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatataaat-cttccacatttaatcat 35812214  T
Q  209 caa 211  Q
    |||    
T  35812213 caa 35812211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 362170 - 362263
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||  ||| ||| |||  || |||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  362170 caagtcaacatcaacaataatcatctaatacaaccattataacttcatatcaacgtctttcacaatatataaatattctcaca-ttaatcatcaa 362263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 46642750 - 46642851
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| || |||| |||||| ||||||||||| ||||||| ||| ||| ||||||||||||||||||||| | ||||||| || ||||| ||||||||    
T  46642750 atatgcagcacgtcaacatcaacaataatcatcaaatataaccattacaacttcatatcaacgtctttcacagtttataaatcttctcaca-ttaatcat 46642848  T
Q  209 caa 211  Q
    |||    
T  46642849 caa 46642851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 52873354 - 52873261
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||  ||| ||| ||| ||| ||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  52873354 caagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaa 52873261  T

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Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 37838882 - 37838822
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| || ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  37838882 caacaacttaaacaacattaacaacttaagactctaattctttggaaagacaacttacaac 37838822  T

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Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 42597611 - 42597551
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| || ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  42597611 caacaacttaaacaacattaacaacttaagactctaattctttggaaagacaacttacaac 42597551  T

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Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 211
Target Start/End: Original strand, 46642887 - 46642997
Alignment:
Q  100 catttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcaca 199  Q
    |||||| |||||| || ||||| |||| |||||||| || |||||| |||||||| ||| ||||||| |||  |||||||||||||||||| ||||| ||    
T  46642887 catttaaacatatacaacaagtaaccaccaataatattcttcatatgtaacaattacaacttcatattaacaactttcacaatatataaatcttttcgca 46642986  T
Q  200 tttaatcatcaa 211  Q
     |||||||||||    
T  46642987 -ttaatcatcaa 46642997  T

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Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 40619661 - 40619715
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagacaactta 75  Q
    ||||| |||||||||| |||||||||||||||||||||||||||| |||||||||    
T  40619661 acaacttagacaacatcaacaacttaagactccaatactttggaacgacaactta 40619715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 10695176 - 10695117
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| |||||||||| || ||||||||||||||||||||||||| |||||||||||||    
T  10695176 caacaacttagacaacatcaa-aacttaagactccaatactttggaacgacaacttacaac 10695117  T

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Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 10908942 - 10908883
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| |||||||||| || ||||||||||||||||||||||||| |||||||||||||    
T  10908942 caacaacttagacaacatcaa-aacttaagactccaatactttggaacgacaacttacaac 10908883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 13844463 - 13844547
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatt 201  Q
    ||||||| |||||| |||||| |||| ||| ||| ||| ||| ||||||||| | |||||||||||||||||||||| |||||||    
T  13844463 caagtcatcatcaacaataataatcaaatacaaccattacaacttcatatcagcatctttcacaatatataaatattctcacatt 13844547  T

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Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 15497315 - 15497263
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    |||||||||| |||||||||||||||||||||||||||| || ||||||||||    
T  15497315 tagacaacatcaacaacttaagactccaatactttggaaggaaaacttacaac 15497263  T

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Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 15884345 - 15884288
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttac 76  Q
    ||||||| |||||||||| |||||||||||| ||||||| ||||||| ||||||||||    
T  15884345 caacaacttagacaacatcaacaacttaagattccaataatttggaacgacaacttac 15884288  T

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Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 14185252 - 14185291
Alignment:
Q  172 tctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  14185252 tctttcacaatatataaatattttcacatttaaccatcaa 14185291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 13592257 - 13592219
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaa 65  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  13592257 tagacaacatcaacaacttaagactccaatactttggaa 13592219  T

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Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 630966 - 630890
Alignment:
Q  112 tgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataa 188  Q
    |||| ||||||| |||||||||||||||||| ||| ||  ||| ||| ||||||||| | || ||||||||||||||    
T  630966 tgcagcaagtcaacatcaataataatcatcaaatacaatcattacaacttcatatcatcatcattcacaatatataa 630890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 15190360 - 15190428
Alignment:
Q  102 tttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaac 170  Q
    |||| |||||| || ||||| ||||||| |||||||| |||| |||||||||| ||| |||||||||||    
T  15190360 tttaaacatatacagcaagtaaccatcattaataatcttcatgtataacaatttcaacttcatatcaac 15190428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 15868901 - 15868825
Alignment:
Q  112 tgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataa 188  Q
    |||| ||||||| |||||| ||||||||||| ||||||  ||| ||| ||||||||| | || ||||||||||||||    
T  15868901 tgcagcaagtcaacatcaacaataatcatcagatataatcattacaacttcatatcatcatcattcacaatatataa 15868825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 19609509 - 19609573
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaa 181  Q
    ||||||| |||||| ||||||||||  ||||||| ||| ||| ||||||||||| ||||||||||    
T  19609509 caagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaa 19609573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 9871489 - 9871438
Alignment:
Q  48 gactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    ||||||||||||||||||| ||| |||||||| ||  |||||||||||||||    
T  9871489 gactccaatactttggaaaaacatcttacaactttgtaacttagaccaacac 9871438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 15791741 - 15791776
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttg 62  Q
    |||||||||| |||||||||||||||||||||||||    
T  15791741 tagacaacatcaacaacttaagactccaatactttg 15791776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 32467214 - 32467163
Alignment:
Q  48 gactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    ||||||||||  ||||||  |||||||||||| |||||||||||||||||||    
T  32467214 gactccaatatcttggaataacaacttacaactttacaacttagaccaacac 32467163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 65
Target Start/End: Complemental strand, 24047449 - 24047415
Alignment:
Q  31 caacattaacaacttaagactccaatactttggaa 65  Q
    |||||| ||||||||||||||||||||||||||||    
T  24047449 caacatcaacaacttaagactccaatactttggaa 24047415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 20692 - 20741
Alignment:
Q  50 ctccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    ||||||||  ||||||  |||||||||||| |||||||||||||||||||    
T  20692 ctccaatatcttggaataacaacttacaactttacaacttagaccaacac 20741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 15008106 - 15008147
Alignment:
Q  38 aacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    |||||| |||||||||||||||||| || |||||||||||||    
T  15008106 aacaacgtaagactccaatactttgaaacgacaacttacaac 15008147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 15365029 - 15365101
Alignment:
Q  29 gacaacattaacaacttaa--gactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    |||||||| |||||||||   ||||||||||||||||||  ||| |||||||| ||  |||||||||||||||    
T  15365029 gacaacatcaacaacttatatgactccaatactttggaacaacatcttacaactttgtaacttagaccaacac 15365101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 27995871 - 27995943
Alignment:
Q  29 gacaacattaacaacttaa--gactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    |||||||| |||||||||   ||||||||||||||||||  ||| |||||||| ||  |||||||||||||||    
T  27995871 gacaacatcaacaacttatatgactccaatactttggaataacatcttacaactttgtaacttagaccaacac 27995943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 15099393 - 15099461
Alignment:
Q  102 tttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaac 170  Q
    |||| |||||| || ||||| ||||||| |||||||| | || |||||||||| ||| |||||||||||    
T  15099393 tttaaacatatacagcaagtaaccatcattaataatctttatgtataacaatttcaacttcatatcaac 15099461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 2e-61; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 8882077 - 8882216
Alignment:
Q  1 tacaccacctcttataaacaacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  8882077 tacaccacctcttataaacaacaacgtagacaacactaacaacttaagactccaatactttgaaaagacaacttacaactttacaacttagaccaacacc 8882176  T
Q  101 atttagacatatgcaccaagtcaccatcaataataatcat 140  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  8882177 atttagacatatgcagcaagttaccatcaataataatcat 8882216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 100 - 211
Target Start/End: Complemental strand, 51274420 - 51274309
Alignment:
Q  100 catttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcaca 199  Q
    |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||    
T  51274420 catttaaacatatgcatcaagtcaccatcaataataatcatcttatataacaattacaacttcatatcaacatctttcacaatatataaatattttcaca 51274321  T
Q  200 tttaatcatcaa 211  Q
    ||||||||||||    
T  51274320 tttaatcatcaa 51274309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 12328670 - 12328576
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    |||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12328670 caagtcaccatcaataataatcatcatatataacaattacatcttcatatcaacgtctttcacaatatataaatattttcaaatttaatcatcaa 12328576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 51326892 - 51326985
Alignment:
Q  129 aataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaatattaatcatc 222  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  51326892 aataataatcaacatatataacaattacaacttcatatcaacgtctttcataatatataaatatgttcacatttaatcatcaatattaatcatc 51326985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 8885447 - 8885528
Alignment:
Q  130 ataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8885447 ataacaatcatcatatattacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 8885528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 12271388 - 12271469
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  12271388 caacaacttagacaacattaacaacttaagattccaatactttggaaagacaacttacaactttacaacttagaccaacacc 12271469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 50000596 - 50000677
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  50000596 caacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttaccacttagaccaacacc 50000677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 43630421 - 43630340
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  43630421 caacaacttagaaaacattaacaacttaagactccaatactttggaaagataacttacaactttacaacttagaccaacacc 43630340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 28194523 - 28194406
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||| |||||| || ||||| |||||||||||||||| |||||||||||| |||||| | |||||||||  |||||||| |||||| || ||    
T  28194523 caacatcatttaaacatatacagcaagtaaccatcaataataatcttcatatataacatttgcaactacatatcaacaactttcacattatatagatttt 28194424  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  28194423 ttcacatttaatcatcaa 28194406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 25263130 - 25263060
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaactt 89  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25263130 caacaacttagacaacataaacaacttaagactccaatactttggaaagacaacttacaactttacaactt 25263060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 48520347 - 48520426
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||| |||||||||| |||||||||||||||||||||||||||| |||||||| |||| |||||| |||||||||||||    
T  48520347 acaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttgcaactttacaatttagaccaacacc 48520426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 11809538 - 11809478
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11809538 caacaacttagacaacattaacaacttaagactccaatactttggaaatacaacttacaac 11809478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 211
Target Start/End: Original strand, 43697433 - 43697537
Alignment:
Q  107 acatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatc 206  Q
    |||||| || ||||| |||| ||||||||||| |||||||||||| |||||| | |||||||||  |||||||| |||||| || |||||||||||||||    
T  43697433 acatatacagcaagtaaccaacaataataatcttcatatataacatttgcaactccatatcaacaactttcacactatatagatcttttcacatttaatc 43697532  T
Q  207 atcaa 211  Q
    |||||    
T  43697533 atcaa 43697537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 10492078 - 10492015
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaactta 90  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||    
T  10492078 tagacaacattaacaacttacgattccaatactttggaaagacaacttacaactttacaactta 10492015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 29764568 - 29764508
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  29764568 caacaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaac 29764508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 28194638 - 28194553
Alignment:
Q  125 catcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    |||||| ||||||||||| ||| ||| ||| ||| ||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  28194638 catcaacaataatcatcaaatacaaccattacaacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaa 28194553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 51326615 - 51326662
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaa 66  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  51326615 caacaacttagacaacattaacaacttaagactccaatactttggaaa 51326662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 20316470 - 20316551
Alignment:
Q  21 acaacgtagacaacattaacaacttaa--gactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||| |||||||||| |||||||||   |||||||||||||||||| || |||||||||| |||||| |||||||||||||    
T  20316470 acaacttagacaacatcaacaacttatatgactccaatactttggaacgataacttacaactttacaatttagaccaacacc 20316551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 43543034 - 43543127
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||  ||| ||  ||| ||| ||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  43543034 caagtcaacatcaacaataatcatctaatacaatcattacaacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaa 43543127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 46198622 - 46198583
Alignment:
Q  36 ttaacaacttaagactccaatactttggaaagacaactta 75  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  46198622 ttaacaacttaagactccaatactttggaaagacaactta 46198583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 23967683 - 23967733
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  23967683 gacaacatcgacaacttaagactccaatactttggaacgacaacttacaac 23967733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 27653519 - 27653430
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatac----------tttggaaagacaacttacaacattacaacttagaccaaca 98  Q
    ||||||| |||||||||||| |||||||||||||||||||          ||||||||||||||||||||| ||| ||||||||||||||    
T  27653519 caacaacttagacaacattatcaacttaagactccaatactttgaaacactttggaaagacaacttacaactttataacttagaccaaca 27653430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 43697297 - 43697390
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||| ||| ||| ||| ||| ||||||||| | ||||||||||||||| |||| | ||||| |||||||||||    
T  43697297 caagtcatcatcaacaataatcatcaaataaaaccattacaacttcatatcagcatctttcacaatatatcaataatctcaca-ttaatcatcaa 43697390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 99
Target Start/End: Complemental strand, 636117 - 636072
Alignment:
Q  54 aatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||    
T  636117 aatactttagaaagacaacttacaactttacaacttagaccaacac 636072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 48301040 - 48301121
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaat 190  Q
    ||||||| ||||||| |||||| |||||| |||  || |||| ||| ||| ||||||||||| |||||||||||||||||||    
T  48301040 atatgcagcaagtcaacatcaacaataataatctcatgtaaccattacaacttcatatcaacatctttcacaatatataaat 48301121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 14800498 - 14800546
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    |||||||| |||||||||||||||||||||||||||| |||| ||||||    
T  14800498 gacaacatcaacaacttaagactccaatactttggaacgacatcttaca 14800546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 14809372 - 14809420
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    |||||||| |||||||||||||||||||||||||||| |||| ||||||    
T  14809372 gacaacatcaacaacttaagactccaatactttggaacgacatcttaca 14809420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 21043433 - 21043385
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    |||||||| |||||||||||||||||||||||||||| |||| ||||||    
T  21043433 gacaacatcaacaacttaagactccaatactttggaacgacatcttaca 21043385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 22131192 - 22131101
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactcca----------atactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| |||||||||| |||||||||||||||||          ||||||||||| || |||||||||| ||||||||||||||||||||    
T  22131192 caacaacttagacaacatcaacaacttaagactccagtactttggaatactttggaacgagaacttacaactttacaacttagaccaacacc 22131101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 23072996 - 23073056
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| |||||||||| ||||||||||| |||||||||||||||| || || |||||||    
T  23072996 caacaacttagacaacatcaacaacttaagtctccaatactttggaacgataaattacaac 23073056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 48603276 - 48603367
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactcc----------aatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| |||||||||| ||||||||||||||||          |||||||||||| ||||||||||||| | ||||||||||||||||||    
T  48603276 caacaacttagacaacatcaacaacttaagactccaatacttttgaatactttggaacgacaacttacaacttaacaacttagaccaacacc 48603367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 46382752 - 46382661
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||  ||| ||| ||| ||| ||||||||||| ||||||||||  |||||||||| ||||| |||||||||||    
T  46382752 caagtcaacatcaacaataatcatctaataaaaccattacaacttcatatcaacatctttcacaa--tataaatattctcaca-ttaatcatcaa 46382661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 100
Target Start/End: Original strand, 51326664 - 51326707
Alignment:
Q  57 actttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||||||||||||||||||| |||||||||| |||||||||    
T  51326664 actttggaaagacaacttacaactttacaacttataccaacacc 51326707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 20958077 - 20958127
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    |||||||| |||||||||||||||||||||||||||| || | ||||||||    
T  20958077 gacaacatcaacaacttaagactccaatactttggaacgaaatcttacaac 20958127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 28312485 - 28312531
Alignment:
Q  31 caacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    |||||| |||||||||||||||||||||||||||| |||| ||||||    
T  28312485 caacatcaacaacttaagactccaatactttggaacgacatcttaca 28312531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 48520301 - 48520351
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||  ||||||||||||||||||||||||||| | |||||||||||    
T  48520301 gacaacatcgacaacttaagactccaatactttggaacggcaacttacaac 48520351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 49261382 - 49261452
Alignment:
Q  100 catttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaac 170  Q
    |||||| ||||||  | ||||| |||||||||||||||| |||| |||||||||| ||| |||||||||||    
T  49261382 catttaaacatatataacaagtaaccatcaataataatcttcatgtataacaattacaacttcatatcaac 49261452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 170
Target Start/End: Original strand, 20636885 - 20636961
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaac 170  Q
    ||||| |||||| |||||| || ||||| |||||||||||||||  |||| |||||||||| ||| ||||| |||||    
T  20636885 caacatcatttaaacatatacagcaagtaaccatcaataataatattcatgtataacaattacaacttcatgtcaac 20636961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 8276913 - 8276862
Alignment:
Q  48 gactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    ||||||||||  ||||||  |||||||||||| |||||||||||||||||||    
T  8276913 gactccaatatcttggaataacaacttacaactttacaacttagaccaacac 8276862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 24726455 - 24726506
Alignment:
Q  48 gactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    ||||||||||  ||||||  |||||||||||| |||||||||||||||||||    
T  24726455 gactccaatatcttggaataacaacttacaactttacaacttagaccaacac 24726506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 8885533 - 8885575
Alignment:
Q  203 aatcatcaatattaatcatcctaacatcttctctctgcttctc 245  Q
    |||||||||||||||||||| |||||||||||||  |||||||    
T  8885533 aatcatcaatattaatcatcttaacatcttctcttggcttctc 8885575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 20316424 - 20316474
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||  |||||||||||||| |||||||||||| ||||||| |||||    
T  20316424 gacaacatcgacaacttaagactctaatactttggaacgacaactcacaac 20316474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 47190568 - 47190606
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaa 65  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  47190568 tagataacatcaacaacttaagactccaatactttggaa 47190606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 6516 - 6399
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6516 caacaccatttaaacatatgcagcaagtcaccatcaataataatcatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatatt 6417  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  6416 ttcacatttaatcatcaa 6399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 1580 - 1697
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  1580 caacatcatttaaacatatgcatcaagtcaccatcaataataatcatcttatataacaattacaacttcatatcaacgtctttcacaatatataaatatt 1679  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  1680 ttcacatttaatcatcaa 1697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 24865608 - 24865491
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||    
T  24865608 caacatcatttaaacatatgcatcaagtcaccatcaataataatcatcttatataacaattacaacttcatatcaacatctttcacaatatataaatatt 24865509  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  24865508 ttcacatttaatcatcaa 24865491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 100 - 211
Target Start/End: Original strand, 22501009 - 22501120
Alignment:
Q  100 catttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcaca 199  Q
    |||||| ||||||||| ||||| |||||||||| |||||||| |||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||    
T  22501009 catttaaacatatgcagcaagttaccatcaatattaatcatcttatataacaattacaacttcatatcaacgtctttcacattatataaatattttcaca 22501108  T
Q  200 tttaatcatcaa 211  Q
    ||||||||||||    
T  22501109 tttaatcatcaa 22501120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 100 - 211
Target Start/End: Original strand, 22508943 - 22509054
Alignment:
Q  100 catttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcaca 199  Q
    |||||| ||||||||| ||||| |||||||||| |||||||| |||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||    
T  22508943 catttaaacatatgcagcaagttaccatcaatattaatcatcttatataacaattacaacttcatatcaacgtctttcacattatataaatattttcaca 22509042  T
Q  200 tttaatcatcaa 211  Q
    ||||||||||||    
T  22509043 tttaatcatcaa 22509054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 23707575 - 23707494
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  23707575 caacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacc 23707494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 27472253 - 27472334
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27472253 caacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacc 27472334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 34874499 - 34874418
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34874499 caacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacc 34874418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 24917944 - 24918025
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24917944 caacaacttagacaaaattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacc 24918025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 100 - 211
Target Start/End: Complemental strand, 7672384 - 7672279
Alignment:
Q  100 catttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcaca 199  Q
    |||||| || |||||| ||||||||||||||||||||||||| |||||||||| |      |||||||||||||||||||||||||||||||||||||||    
T  7672384 catttaaacgtatgcatcaagtcaccatcaataataatcatcttatataacaact------tcatatcaacgtctttcacaatatataaatattttcaca 7672291  T
Q  200 tttaatcatcaa 211  Q
    ||||||||||||    
T  7672290 tttaatcatcaa 7672279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 21082015 - 21081942
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21082015 tagacaacattaacaacttaacactccaatactttggaaagacaacttacaactttacaacttagaccaacacc 21081942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 22459841 - 22459768
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22459841 tagacaacattaacaacttaagattccaatactttggaaagacaacttacaactttacaacttagaccaacacc 22459768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 24670829 - 24670910
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  24670829 caacaacttagacaacattaacaacttaagactccaatacttgtgaaagacaacttacaactttacaacttagaccaacacc 24670910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 24681250 - 24681331
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  24681250 caacaacttagacaacattaacaacttaagactccaatactttggaaagaaaacttgcaactttacaacttagaccaacacc 24681331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 2524526 - 2524450
Alignment:
Q  135 aatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2524526 aatcatcatatgtaacaattacaatttgatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 2524450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 6576403 - 6576505
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||||| |||||| ||||||||||| ||||||| ||| ||| ||||||||||| ||||||||||||||||||| ||||||| |||||||||    
T  6576403 atatgcagcaagtcaacatcaacaataatcatcaaatataaccattacaacttcatatcaacatctttcacaatatataaattttttcacttttaatcat 6576502  T
Q  209 caa 211  Q
    |||    
T  6576503 caa 6576505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 21914744 - 21914804
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  21914744 caacaacttagacaacattagcaacttaagactccaatactttggaacgacaacttacaac 21914804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 22501128 - 22501195
Alignment:
Q  125 catcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatat 192  Q
    |||||||| |||||||| |||||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  22501128 catcaatattaatcatcttatataacaattacaacttcatatcaacgtctttcacattatataaatat 22501195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 22509062 - 22509129
Alignment:
Q  125 catcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatat 192  Q
    |||||||| |||||||| |||||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  22509062 catcaatattaatcatcttatataacaattacaacttcatatcaacgtctttcacattatataaatat 22509129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 192
Target Start/End: Original strand, 24883630 - 24883713
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatat 192  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||| ||| ||| ||||||||||| |||||||||||||||||||||    
T  24883630 atatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatataaatat 24883713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 24436221 - 24436321
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||||| |||||| || |||||||  || |||| ||| ||||||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  24436221 atatgcagcaagtcaacatcaacaa-aatcatccaatgtaaccattacaatttcatatcaacatctttcacaatatataaat-ctttcacatttaatcat 24436318  T
Q  209 caa 211  Q
    |||    
T  24436319 caa 24436321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 34492422 - 34492362
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| || ||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  34492422 caacaacttatacaacatcaacaacttaagactccaatactttggaacgacaacttacaac 34492362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 37379424 - 37379484
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| || ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  37379424 caacaacttaaacaacattaacaacttaagactctaattctttggaaagacaacttacaac 37379484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 13101808 - 13101748
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| |||||||||| ||| | |||||||||||||||||||||| |||||||||||||    
T  13101808 caacaacttagacaacatcaaccatttaagactccaatactttggaacgacaacttacaac 13101748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 24316381 - 24316335
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaa 65  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||    
T  24316381 caacaacttagacaacattaacaatttaagactccaatactttggaa 24316335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 39828153 - 39828104
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagaca 70  Q
    ||||| |||||||||| |||||||||||||||||||||||||||| ||||    
T  39828153 acaacttagacaacatcaacaacttaagactccaatactttggaacgaca 39828104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 34136909 - 34136957
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    |||||||| |||||||||||||||||||||||||||| |||| ||||||    
T  34136909 gacaacatcaacaacttaagactccaatactttggaacgacatcttaca 34136957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 27485419 - 27485376
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttg 62  Q
    ||||||| |||||||||||||||||||||||| |||||||||||    
T  27485419 caacaacttagacaacattaacaacttaagaccccaatactttg 27485376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 20320885 - 20320804
Alignment:
Q  21 acaacgtagacaacattaacaacttaa--gactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||| || ||||||| |||||||||   |||| ||||||||||||| ||||||||| ||| |||||| |||||||||||||    
T  20320885 acaacttaaacaacatcaacaacttatatgacttcaatactttggaacgacaacttataactttacaatttagaccaacacc 20320804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 21073642 - 21073596
Alignment:
Q  31 caacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    |||||| |||||||||||||||||||||||||||| |||| ||||||    
T  21073642 caacatcaacaacttaagactccaatactttggaacgacatcttaca 21073596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 23069535 - 23069489
Alignment:
Q  54 aatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||||||||| |||| |||||||| ||||||||||||||||||||    
T  23069535 aatactttggaacgacagcttacaactttacaacttagaccaacacc 23069489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 24781715 - 24781643
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaa 181  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||| ||| ||| |||||||||||  |||||||||    
T  24781715 atatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacaactttcacaa 24781643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 5985213 - 5985264
Alignment:
Q  48 gactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    ||||||||||  ||||||  |||||||||||| |||||||||||||||||||    
T  5985213 gactccaatatcttggaacaacaacttacaactttacaacttagaccaacac 5985264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 25045134 - 25045185
Alignment:
Q  48 gactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    ||||||||||  ||||||  |||||||||||| |||||||||||||||||||    
T  25045134 gactccaatatcttggaataacaacttacaactttacaacttagaccaacac 25045185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 9241898 - 9241931
Alignment:
Q  31 caacattaacaacttaagactccaatactttgga 64  Q
    |||||| |||||||||||||||||||||||||||    
T  9241898 caacatcaacaacttaagactccaatactttgga 9241931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 5032199 - 5032127
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaa 181  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||| |||  || ||||||||||| | ||||||||    
T  5032199 atatgcagcaagtcaacatcaacaataatcatccaatataaccattataacttcatatcaacatttttcacaa 5032127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 94 - 210
Target Start/End: Original strand, 10909 - 11025
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||| ||||||||| |||||||| |||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||    
T  10909 caacatcatttaaacatatgcagcaagtcacaatcaataataatcatcatatataacaattaaaaattcatatcaacgtctttcacaatatataaatatt 11008  T
Q  194 ttcacatttaatcatca 210  Q
    |||||||||||||||||    
T  11009 ttcacatttaatcatca 11025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 87; Significance: 8e-42; HSPs: 3)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 4644 - 4746
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4644 atatgcatcaagtcaacatcaataataataatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 4743  T
Q  209 caa 211  Q
    |||    
T  4744 caa 4746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 226 - 328
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  226 atatgcatcaagtcaacatcaataataataatcatatataacaattacaatttcatatcaacgtctttcacaatatataaatattttcacatataatcat 325  T
Q  209 caa 211  Q
    |||    
T  326 caa 328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 1577 - 1498
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1577 acaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacc 1498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 498 - 611
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||  ||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  498 caacatcattttaacatatgcagcaagtcaccatcaataataatcatcatatataacaattataatttcatatcaacgtctttcacaatatataaatatt 597  T
Q  194 ttcacatttaatca 207  Q
    ||| ||||||||||    
T  598 ttctcatttaatca 611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 14354 - 14471
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||| ||||| ||||||    
T  14354 caacatcatttaaacatatgcatcaagtcaccatcaataataatcatcttatataacaattacaacttcatatcaacgtctttcacattatatgaatatt 14453  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  14454 ttcacatttaatcatcaa 14471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 7228 - 7147
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7228 caacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacc 7147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 6882 - 6780
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||||| ||| || ||||||||||| ||||||  ||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  6882 atatgcagcaagtcaacatgaacaataatcatcaaatataatcattacaactccatatcaacgtctttcacaatatataaatattttcacatttaatcat 6783  T
Q  209 caa 211  Q
    |||    
T  6782 caa 6780  T

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Target: scaffold0022 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 54125 - 54044
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  54125 caacaacttagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacc 54044  T

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Target: scaffold0025 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 78237 - 78318
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  78237 caacaacttagacaacattaacaacttaagactccaatactttggaaagacagcttacaactttacaacttagaccaacacc 78318  T

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Target: scaffold0019 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 21785 - 21866
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21785 caacaacttagataacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacc 21866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 132888 - 132921
Alignment:
Q  31 caacattaacaacttaagactccaatactttgga 64  Q
    |||||| |||||||||||||||||||||||||||    
T  132888 caacatcaacaacttaagactccaatactttgga 132921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 98
Target Start/End: Complemental strand, 5692 - 5621
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaaca 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5692 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaaca 5621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 5579 - 5478
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||| | |||||| ||||||||||  ||||||  ||| ||| |||||||||||  ||||||||||||||||||  ||||||||||||||||    
T  5579 atatgcagcaagttaacatcaacaataatcatccaatataaacattacaacttcatatcaacacctttcacaatatataaat-ctttcacatttaatcat 5481  T
Q  209 caa 211  Q
    |||    
T  5480 caa 5478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 721 - 792
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaaca 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  721 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaaca 792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 834 - 935
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||| ||| ||| ||||||||||| ||||||||||||||| |||  ||||||||||||||||    
T  834 atatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaatatattaat-ctttcacatttaatcat 932  T
Q  209 caa 211  Q
    |||    
T  933 caa 935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 7039 - 6958
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  7039 caacaacttagacaacattaacaaattaagactccaatacattggaaagacaacttacaactttacaacttagaccaacacc 6958  T

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Target: scaffold0515 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 4161 - 4234
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  4161 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaattttacaacttagaccaacacc 4234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 7189 - 7108
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||    
T  7189 caacaacttagacaacattaacaacttaagactccaattcttttgaaagacaacttacaactttacaacttagaccaacacc 7108  T

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Target: scaffold0306 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 4161 - 4234
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  4161 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaattttacaacttagaccaacacc 4234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 70751 - 70670
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  70751 caacaacttagacaacattaacaacttaagactccaatacttttgaaagacaacttacaattttacaacttagaccaacacc 70670  T

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Target: scaffold0032 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 67095 - 67176
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  67095 caacaacttagacaaaattaacaacttaagactccaatactttggaaagacaacttacaactttataacttagaccaacacc 67176  T

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Target: scaffold0020 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 170036 - 169955
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  170036 caacaacttagacaaaattaagaacttaagactccaatactttggaaagacaacttacaactttacaacttagaccaacacc 169955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 7766 - 7840
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagac 93  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  7766 caacaacttagacaacattaacaactaaagactccaatactttggaaagacaacttacaactttacaacttagac 7840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 7671 - 7700
Alignment:
Q  1 tacaccacctcttataaacaacaacgtaga 30  Q
    ||||||||||||||||||||||||||||||    
T  7671 tacaccacctcttataaacaacaacgtaga 7700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 15550 - 15448
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||| ||| ||||||| |||||||||  |||||||||| |||| ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  15550 atatgcagcaaatcaacatcaatgataatcatcgaatataacaatcgcaacttcatatcaacatttttcacaatatataaatattttcacatttaatcat 15451  T
Q  209 caa 211  Q
    |||    
T  15450 caa 15448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 24608 - 24506
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||| ||| ||||||| |||||||||  |||||||||| |||| ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  24608 atatgcagcaaatcaacatcaatgataatcatcgaatataacaatcgcaacttcatatcaacatttttcacaatatataaatattttcacatttaatcat 24509  T
Q  209 caa 211  Q
    |||    
T  24508 caa 24506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 62; Significance: 7e-27; HSPs: 3)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 43858 - 43741
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||| |||||| || ||||| |||||||||||||||| |||||||||||| |||||| | |||||||||  |||||||| |||||| || ||    
T  43858 caacatcatttaaacatatacagcaagtaaccatcaataataatcttcatatataacatttgcaactccatatcaacaactttcacattatatagatctt 43759  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  43758 ttcacatttaatcatcaa 43741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 47778 - 47661
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    ||||| |||||| |||||| || ||||| |||||||||||||||| |||||||||||| |||||| | |||||||||  |||||||| |||||| || ||    
T  47778 caacatcatttaaacatatacaacaagtaaccatcaataataatcttcatatataacatttgcaactacatatcaacaactttcacattatatagatctt 47679  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  47678 ttcacatttaatcatcaa 47661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 43981 - 43888
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||| ||| ||| ||| ||| ||||||||| | |||||||||||||||||||||| ||||| |||||||||||    
T  43981 caagtcatcatcaacaataatcatcaaatacaaccattacaacttcatatcagcatctttcacaatatataaatattctcaca-ttaatcatcaa 43888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 94 - 211
Target Start/End: Complemental strand, 59443 - 59327
Alignment:
Q  94 caacaccatttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatatt 193  Q
    |||||||||| | | ||||||| ||||||| |||||| ||||||||||  ||||||||||| ||| ||||||||||| |||||||||||||||||||  |    
T  59443 caacaccattaaaaaatatgcagcaagtcaacatcaacaataatcatccaatataacaattacaacttcatatcaacatctttcacaatatataaat-ct 59345  T
Q  194 ttcacatttaatcatcaa 211  Q
    ||||||||||||||||||    
T  59344 ttcacatttaatcatcaa 59327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 1527 - 1457
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  1527 gacaacatcaacaacttaagactccaatactttggaatgacaacttacaactttacaacttagaccaacac 1457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 362739 - 362805
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagac 93  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  362739 tagacaacattaacaacttaagattccaatactttggaaagacaacttacaactttacaacttagac 362805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 362929 - 363022
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||  ||| ||  ||| ||| ||||||||||| ||||||| |||||||||||||| ||||| |||||||||||    
T  362929 caagtcaacatcaacaataatcatctaatacaatcattacaacttcatatcaacatctttcaaaatatataaatattctcaca-ttaatcatcaa 363022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 15424 - 15494
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||||| |||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  15424 gacaacatcaacaacttaagaatccaatactttggaacgacaacttacaac-ttacaacttagaccaacacc 15494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 24874 - 24811
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaacattacaactta 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||    
T  24874 tagacaacattaacaacttaagactccaatactttggaaagacaacttcaaactttacaactta 24811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 85167 - 85265
Alignment:
Q  112 tgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    |||| ||||||| |||||| ||||||||||| ||| ||| ||| ||| ||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  85167 tgcagcaagtcaacatcaacaataatcatcaaatacaactattacaacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaa 85265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 85368 - 85460
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaat-----------actttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||| ||||||||           ||||||||||||||||||||||| ||||||||||||||||||||    
T  85368 caacaacttagacaacattaacaacttaatactccaatactttggaaacactttggaaagacaacttacaactttacaacttagaccaacacc 85460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 85301 - 85371
Alignment:
Q  100 catttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaac 170  Q
    |||||| |||||| || ||||| |||||||||||||||| |||||||||||| |||||| | |||||||||    
T  85301 catttaaacatatacatcaagtaaccatcaataataatcttcatatataacatttgcaactccatatcaac 85371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 2969 - 3062
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||| ||| ||| ||| ||| ||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  2969 caagtcatcatcaacaataatcatcaaatacaaccattacaacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaa 3062  T

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Target: scaffold0100 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 36245 - 36152
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||||| |||||| ||||||||||  ||||||| ||| ||| ||||||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  36245 caagtcaacatcaacaataatcatctaatataaccattacaacttcatatcaacatctttcacaatatataaatattctcaca-ttaatcatcaa 36152  T

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Target: scaffold0561 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 10440 - 10492
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10440 tagacaacattaacaacttaagattccaatactttggaaagacaacttacaac 10492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 10343 - 10403
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  10343 caacaacttagacaacatcaacaacttaagactccaatactttggaacgacaacttacaac 10403  T

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Target: scaffold0436 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 7990 - 8050
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  7990 caacaacttagacaacatcaacaacttaagactccaacactttggaaagacaacttacaac 8050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 50 - 110
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  50 caacaacttagacaacactaacaacttaagactccaatactttgaaaagacaacttacaac 110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 49; Significance: 4e-19; HSPs: 5)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 117192 - 117252
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaacat 81  Q
    ||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  117192 acaacatagacaacatcaacaacttaagactccaatactttggaacgacaacttacaacat 117252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 117146 - 117198
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaacat 81  Q
    ||||||||  |||||||||||||||||||||||||||  ||||||||||||||    
T  117146 gacaacatcgacaacttaagactccaatactttggaactacaacttacaacat 117198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 119802 - 119847
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaac 72  Q
    |||||||||| ||||||||||||||||||||||||| || ||||||    
T  119802 tagacaacatcaacaacttaagactccaatactttgaaatgacaac 119847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 119842 - 119878
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaa 65  Q
    |||||||| ||||||||||||||||||||||||||||    
T  119842 gacaacatcaacaacttaagactccaatactttggaa 119878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 119877 - 119923
Alignment:
Q  54 aatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||||||||| |||||||||||||  |||||||||||| ||||||    
T  119877 aatactttggaacgacaacttacaactatacaacttagacaaacacc 119923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 77821 - 77877
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaactta 75  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  77821 caacaacttagacaacattaacaacttacgactccaatactttggaaagacaactta 77877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 126869 - 126921
Alignment:
Q  27 tagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  126869 tagacaacattaacaacttaagattccaatactttggaaagacaacttacaac 126921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1783 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 270 - 332
Alignment:
Q  38 aacaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||||||||||  |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  270 aacaacttaagactataatactttggaacgacaacttacaactttacaacttagaccaacacc 332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 211
Target Start/End: Original strand, 3093 - 3194
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcat 208  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||| ||| ||| ||||||||||| | |||||| ||||||||||  ||||||||||||||||    
T  3093 atatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatttttcacgatatataaat-ctttcacatttaatcat 3191  T
Q  209 caa 211  Q
    |||    
T  3192 caa 3194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 3010 - 2919
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaa----------agacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||          |||||||||||||| ||||||||||||||||||||    
T  3010 caacaacttagacaacattaacaacttaagaatccaatactttggaacactttggaaagacaacttacaactttacaacttagaccaacacc 2919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 7591 - 7682
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaata----------ctttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| |||||||||| ||||||||||||||||||||          |||||||||||||||||||||| ||||||||||||||||||||    
T  7591 caacaacttagacaacatcaacaacttaagactccaatactttagaatactttggaaagacaacttacaactttacaacttagaccaacacc 7682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 3527 - 3618
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaata----------ctttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| |||||||||| ||||||||||||||||||||          |||||||| ||||||||||||| ||||||||||||||||||||    
T  3527 caacaacttagacaacatcaacaacttaagactccaatactttcgaatactttggaacgacaacttacaactttacaacttagaccaacacc 3618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 21017 - 21071
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagacaactta 75  Q
    ||||| |||||||||| |||||||||||||||||||||||||||| |||||||||    
T  21017 acaacttagacaacatcaacaacttaagactccaatactttggaacgacaactta 21071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 20971 - 21021
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||  |||||||||||||||||||||||||||  ||||||||||||    
T  20971 gacaacatcgacaacttaagactccaatactttggaacaacaacttacaac 21021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 76936 - 77019
Alignment:
Q  126 atcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacatttaatcatcaa 211  Q
    ||||| ||||||||||  ||||||| ||| ||| |||||||| || |||||||||||||||||  |||||||||||||||||||||    
T  76936 atcaacaataatcatccaatataaccattacaacttcatatccacatctttcacaatatataa--attttcacatttaatcatcaa 77019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 497387 - 497436
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagaca 70  Q
    ||||| |||||||||| |||||||||||||| ||||||||| ||| ||||    
T  497387 acaacttagacaacatcaacaacttaagacttcaatactttagaacgaca 497436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 1433 - 1380
Alignment:
Q  38 aacaacttaagactccaatactttggaaagacaacttacaacattacaacttag 91  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  1433 aacaacttaagactccaatactttggaacgacaacttacaactttaaaacttag 1380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 8184 - 8131
Alignment:
Q  38 aacaacttaagactccaatactttggaaagacaacttacaacattacaacttag 91  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  8184 aacaacttaagactccaatactttggaacgacaacttacaactttaaaacttag 8131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 2720 - 2660
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| || ||||||| ||||||||||| |||||||||||||||| |||||||||||||    
T  2720 caacaacttatacaacatcaacaacttaaggctccaatactttggaacgacaacttacaac 2660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 212
Target Start/End: Complemental strand, 2552 - 2448
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattt-tcacatttaatca 207  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||| ||| ||| ||| ||| | | ||||||||||||||||||| |||   |||||||||||    
T  2552 atatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcttatgagcatctttcacaatatataaatctttcgtacatttaatca 2453  T
Q  208 tcaat 212  Q
    |||||    
T  2452 tcaat 2448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 15563 - 15611
Alignment:
Q  17 aacaacaacgtagacaacattaacaacttaagactccaatactttggaa 65  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  15563 aacaacaacttagacatcattaacaacttaagactccaatactttggaa 15611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 15613 - 15655
Alignment:
Q  57 actttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    ||||||||||||||||||||||| |||||| || |||||||||    
T  15613 actttggaaagacaacttacaactttacaaattcgaccaacac 15655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 2171 - 2080
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttgg----------aaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||          ||| |||||||||||| ||||||||||||||||||||    
T  2171 caacaacatagacaacattaacaacttaagacttcaatactttggaacactttgcaaatacaacttacaactttacaacttagaccaacacc 2080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 36149 - 36197
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  36149 gacaacatcaacaacttaagactccaatactttggaaagacatcttaca 36197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 10333 - 10290
Alignment:
Q  57 actttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  10333 actttggaaagacaacttacaactttgcaacttagaccaacacc 10290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 200
Target Start/End: Complemental strand, 11066 - 10983
Alignment:
Q  117 caagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataaatattttcacat 200  Q
    ||||||| |||||| ||||||||||  ||| ||| ||| ||| ||||||||||| ||||| |||||||||||||||| ||||||    
T  11066 caagtcaacatcaacaataatcatctaatacaaccattacaacttcatatcaacatcttttacaatatataaatattctcacat 10983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 7519 - 7569
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    |||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  7519 gacaacatcaacaacttaagaatccaatactttggaacgacaacttacaac 7569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 721 - 767
Alignment:
Q  54 aatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  721 aatactttggaacgacaacttacaactttacaacttagaccaacacc 767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 20671 - 20717
Alignment:
Q  54 aatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  20671 aatactttggaacgacaacttacaactttacaacttagaccaacacc 20717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 125735 - 125785
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  125735 gacaacatcgacaacttaagactccaatactttggaacgacaacttacaac 125785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 125824 - 125870
Alignment:
Q  54 aatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  125824 aatactttggaacgacaacttacaactttacaacttagaccaacacc 125870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 38311 - 38267
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaa 65  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||    
T  38311 acaacttagacaacatcaacaacttaagactccaatactttggaa 38267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 125781 - 125825
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaa 65  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||    
T  125781 acaacttagacaacatcaacaacttaagactccaatactttggaa 125825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 99
Target Start/End: Complemental strand, 13628 - 13583
Alignment:
Q  54 aatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||    
T  13628 aatactttggaacgacaacttacaactttacaacttagaccaacac 13583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 13707 - 13667
Alignment:
Q  39 acaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  13707 acaacttaagactccaatactttggaatgacaacttacaac 13667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 13671 - 13627
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaa 65  Q
    ||||| |||||||||| |||||||| |||||||||||||||||||    
T  13671 acaacttagacaacatcaacaactttagactccaatactttggaa 13627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 10101 - 10029
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaa 181  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||| ||| ||| ||||||||||| ||||||||||    
T  10101 atatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcacaa 10029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 100
Target Start/End: Original strand, 369 - 452
Alignment:
Q  27 tagacaacattaacaacttaagactccaat----------actttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||||||||||||||||||||||||||||          ||||| ||||||||||||||||| ||||| ||||||||||||||    
T  369 tagacaacattaacaacttaagactccaatagtttggaacacttttgaaagacaacttacaactttacagcttagaccaacacc 452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 8130 - 8178
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    |||||||| |||||||||||||||||||||||||||| |||| ||||||    
T  8130 gacaacatcaacaacttaagactccaatactttggaacgacatcttaca 8178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 616 - 664
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||||    
T  616 gacaacaataacaacttaagactccaatactttggaacgacatcttaca 664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 180
Target Start/End: Complemental strand, 9177 - 9106
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcaca 180  Q
    ||||||| ||||||| |||||| ||||||||||  ||||||| ||| ||| ||||||||||| |||||||||    
T  9177 atatgcagcaagtcaacatcaacaataatcatccaatataaccattacaacttcatatcaacatctttcaca 9106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 3624 - 3578
Alignment:
Q  19 caacaacgtagacaacattaacaacttaagactccaatactttggaa 65  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  3624 caacaacttagacaacaataacaacttaagacttcaatactttggaa 3578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 7669 - 7750
Alignment:
Q  21 acaacgtagacaacattaacaacttaa--gactccaatactttggaaagacaacttacaacattacaacttagaccaacacc 100  Q
    ||||| |||||||||  |||||||||   |||||||||||||||||| ||||||||| ||| |||||| ||||| |||||||    
T  7669 acaacttagacaacaccaacaacttatatgactccaatactttggaacgacaacttataactttacaatttagagcaacacc 7750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 7623 - 7673
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||  ||||||||||||||||||||||||||| ||| ||| |||||    
T  7623 gacaacatcgacaacttaagactccaatactttggaatgaccactcacaac 7673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 33061 - 33099
Alignment:
Q  41 aacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  33061 aacttaagactccaatactttggaacgacaacttacaac 33099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 22681 - 22639
Alignment:
Q  37 taacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||| ||||||||||||||||||||| |||||||||||||    
T  22681 taacaacgtaagactccaatactttggaacgacaacttacaac 22639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 17076 - 17027
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagaca 70  Q
    ||||| |||||||||| | ||||||| |||||||||||||||||| ||||    
T  17076 acaacttagacaacatcatcaacttaggactccaatactttggaacgaca 17027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 70
Target Start/End: Original strand, 8851 - 8900
Alignment:
Q  21 acaacgtagacaacattaacaacttaagactccaatactttggaaagaca 70  Q
    ||||| |||||||||| ||||||||| |||||||||||||||||| ||||    
T  8851 acaacttagacaacatcaacaacttatgactccaatactttggaacgaca 8900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 886 - 806
Alignment:
Q  21 acaacgtagacaacattaacaacttaa--gactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    ||||| |||||||| | |||||||||   ||||||||||  ||||||  |||||||||||| |||||||||||||||||||    
T  886 acaacttagacaacttcaacaacttatatgactccaatatcttggaacaacaacttacaactttacaacttagaccaacac 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 6190 - 6110
Alignment:
Q  21 acaacgtagacaacattaacaacttaa--gactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    ||||| |||||||| | |||||||||   ||||||||||  ||||||  |||||||||||| |||||||||||||||||||    
T  6190 acaacttagacaacttcaacaacttatatgactccaatatcttggaacaacaacttacaactttacaacttagaccaacac 6110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 1863 - 1911
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    |||||||| |||||||||||||||||||||||||| | |||| ||||||    
T  1863 gacaacatcaacaacttaagactccaatactttgggacgacaccttaca 1911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 181
Target Start/End: Complemental strand, 8261 - 8189
Alignment:
Q  109 atatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaa 181  Q
    ||||||| ||||||| |||||| || |||||||  ||||||| ||| ||| ||||||||||| ||||||||||    
T  8261 atatgcagcaagtcaacatcaacaacaatcatccaatataaccattacaacttcatatcaacatctttcacaa 8189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 19576 - 19516
Alignment:
Q  39 acaacttaagactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    |||||||| ||||||||||  ||||||  | |||||||||| |||||||||||||||||||    
T  19576 acaacttatgactccaatatcttggaataataacttacaactttacaacttagaccaacac 19516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 18319 - 18271
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    |||||||| |||||||||||||||||||||||||| | |||| ||||||    
T  18319 gacaacatcaacaacttaagactccaatactttgggacgacatcttaca 18271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 28410 - 28461
Alignment:
Q  48 gactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    ||||||||||  |||||| ||||||||||||| || ||||||||||||||||    
T  28410 gactccaatatcttggaacgacaacttacaactttgcaacttagaccaacac 28461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 221357 - 221310
Alignment:
Q  30 acaacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    ||||||| ||||||||||| |||||||||||||||| |||| ||||||    
T  221357 acaacatcaacaacttaagcctccaatactttggaacgacatcttaca 221310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 397625 - 397676
Alignment:
Q  48 gactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    ||||||||||  ||||||  |||||||||||| |||||||||||||||||||    
T  397625 gactccaatatcttggaataacaacttacaactttacaacttagaccaacac 397676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 2370 - 2300
Alignment:
Q  100 catttagacatatgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaac 170  Q
    |||||| |||||| || ||||| ||||||| |||||||| |||| || ||||||| ||| |||||||||||    
T  2370 catttaaacatatacaacaagtaaccatcattaataatcttcatgtacaacaatttcaacttcatatcaac 2300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 5606 - 5640
Alignment:
Q  45 taagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||||||||||||||| |||||||||||||    
T  5606 taagactccaatactttggaacgacaacttacaac 5640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 9869 - 9836
Alignment:
Q  31 caacattaacaacttaagactccaatactttgga 64  Q
    |||||| |||||||||||||||||||||||||||    
T  9869 caacatcaacaacttaagactccaatactttgga 9836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 24266 - 24346
Alignment:
Q  21 acaacgtagacaacattaacaacttaa--gactccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    ||||| |||||||||| |||||||||   |||||||||||||| |||  |||||||| ||| ||  |||||||||||||||    
T  24266 acaacttagacaacatcaacaacttatatgactccaatactttagaactacaacttaaaactttgtaacttagaccaacac 24346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 60391 - 60440
Alignment:
Q  50 ctccaatactttggaaagacaacttacaacattacaacttagaccaacac 99  Q
    ||||||||  ||||||  |||||||||||| |||||||||||||||||||    
T  60391 ctccaatatcttggaataacaacttacaactttacaacttagaccaacac 60440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 8486 - 8410
Alignment:
Q  112 tgcaccaagtcaccatcaataataatcatcatatataacaattgcaatttcatatcaacgtctttcacaatatataa 188  Q
    |||| ||||||| |||||| ||||||||||| ||| ||  ||| ||| ||||||||| | || ||||||||||||||    
T  8486 tgcaacaagtcaacatcaacaataatcatcaaatacaatcattacaacttcatatcatcatcattcacaatatataa 8410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 56826 - 56867
Alignment:
Q  38 aacaacttaagactccaatactttggaaagacaacttacaac 79  Q
    ||||||||| || ||||||||||||||| |||||||||||||    
T  56826 aacaacttacgaatccaatactttggaacgacaacttacaac 56867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 10125 - 10173
Alignment:
Q  22 caacgtagacaacattaacaacttaagactccaatactttggaaagaca 70  Q
    |||| |||||||| | |||||||||||||||||| ||||||||| ||||    
T  10125 caacttagacaacttcaacaacttaagactccaacactttggaacgaca 10173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 89
Target Start/End: Original strand, 17 - 49
Alignment:
Q  57 actttggaaagacaacttacaacattacaactt 89  Q
    ||||||||||||||||||||||| |||||||||    
T  17 actttggaaagacaacttacaactttacaactt 49  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 3226 - 3274
Alignment:
Q  29 gacaacattaacaacttaagactccaatactttggaaagacaacttaca 77  Q
    ||||| || |||||||||||||||||||||||||| | |||| ||||||    
T  3226 gacaaaatcaacaacttaagactccaatactttgggacgacatcttaca 3274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 69174 - 69202
Alignment:
Q  27 tagacaacattaacaacttaagactccaa 55  Q
    |||||||||||||||||||||||||||||    
T  69174 tagacaacattaacaacttaagactccaa 69202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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