View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12561_low_14 (Length: 212)
Name: NF12561_low_14
Description: NF12561
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12561_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 37859279 - 37859456
Alignment:
| Q |
20 |
agttattgatgtgagtggtggaggaaagttacaagaagctttattaactcttctagacacacaattattcatgttgttattgttaacatcatttcttgtg |
119 |
Q |
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| T |
37859279 |
agttattgaagtgagtggtggaggaaagttacaagaagctttattaactcttctagacacacaattattcatgttgttattgttaacatcatttcttgtg |
37859378 |
T |
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| Q |
120 |
tcagaagaaaataatgaaacatcaatatcactactttcaccagcattgctaccagtttcactcccaaggctttcagtg |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37859379 |
tcagaagaaaataatgaaacatcaatatcactactttcaccagcattgctaccagtttcactcccaaggctttcagtg |
37859456 |
T |
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