View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12563_high_8 (Length: 311)
Name: NF12563_high_8
Description: NF12563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12563_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 38447098 - 38447319
Alignment:
| Q |
1 |
ataacaatgttgatcgcagaagagttactccggttcattcctcgaggagtgaaccgaaccggcaatcaccgaaccagtcgccgagaatgagaaaagttgc |
100 |
Q |
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| T |
38447098 |
ataacaatgttgatcgcagaagagttactccggttcattcttcgaggagtgaaccgaaccggcaatcaccgaaccagtcgccgagaatgagaaaagttgc |
38447197 |
T |
|
| Q |
101 |
cacttaccaaaaagagaaggcctcggtggaagatgaatcatcaagtacctcttcacataccgatactgaggtttgtatattttattaatttttcatatct |
200 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38447198 |
cacttaccaaaaagagaagtcctcggtggaagatgaatcatcaagtacctcttcacataccgatactgaggtttgtatattttattaatttttcatatct |
38447297 |
T |
|
| Q |
201 |
taaatcgattagatcacgatag |
222 |
Q |
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|| ||||||||||||||||||| |
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| T |
38447298 |
tatatcgattagatcacgatag |
38447319 |
T |
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