View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12568_high_20 (Length: 206)
Name: NF12568_high_20
Description: NF12568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12568_high_20 |
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Alignment Details
Target: chr2 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 41675737 - 41675559
Alignment:
| Q |
15 |
cacagagagcaaaacagaactatatgtatatgcaacatatataatcaaacatagaatatgataaatattaatctgaagtttacttggatgtgtatataat |
114 |
Q |
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| T |
41675737 |
cacagagagcaaaacagaactatatgtatatgcaacatatataatcaaacatagaatatgataaatattaatctgaagtttacttggatgtgtatataat |
41675638 |
T |
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| Q |
115 |
ttttcaccaatgtataaatctaataactcactttagttaactcttaattacaatcaaatctatgatattaaagtgatga |
193 |
Q |
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| T |
41675637 |
ttttcaccaatgtataaatctaataactcactttagttaactcttaattacaatcaaatctatgatattaaagttatga |
41675559 |
T |
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