View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12568_high_7 (Length: 371)
Name: NF12568_high_7
Description: NF12568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12568_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 343; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 12 - 358
Target Start/End: Complemental strand, 41675905 - 41675559
Alignment:
| Q |
12 |
acagaactatagagagagactctagacaacaggacttaccacatgaaggttgtaggcttgtacgttttccaatgtagatctaaaactacttaaaatggta |
111 |
Q |
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| T |
41675905 |
acagaactatagagagagactctagacaacaggacttaccacatgaaggttgtaggcttgtacgttttccaatgtagatctaaaactacttaaaatggta |
41675806 |
T |
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| Q |
112 |
agttgaagccattgaagagcataagctattaagctctatcaaaaagtagacccttttccttcacaacacacagagagcaaaacagaactatatgtatatg |
211 |
Q |
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| T |
41675805 |
agttgaagccattgaagagcataagctattaagctctatcaaaaagtagacccttttccttcacaacacacagagagcaaaacagaactatatgtatatg |
41675706 |
T |
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| Q |
212 |
caacatatataatcaaacatagaatatgataaatattaatctgaagtttacttggatgtgtatataatttttcaccaatgtataaatctaataactcact |
311 |
Q |
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| T |
41675705 |
caacatatataatcaaacatagaatatgataaatattaatctgaagtttacttggatgtgtatataatttttcaccaatgtataaatctaataactcact |
41675606 |
T |
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| Q |
312 |
ttagttaactcttaattacaatcaaatctatgatattaaagtgatga |
358 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
41675605 |
ttagttaactcttaattacaatcaaatctatgatattaaagttatga |
41675559 |
T |
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