View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12568_low_14 (Length: 297)
Name: NF12568_low_14
Description: NF12568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12568_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 18 - 283
Target Start/End: Original strand, 40022755 - 40023020
Alignment:
| Q |
18 |
aataacattaccaacatacaatccaacttgaactttcagcccatgcaccttaatattgaacctatcaaacctagttgggttctcccacactgaccaaact |
117 |
Q |
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| T |
40022755 |
aataacattaccaacatacaatccaacttgaactttcagcccgtgcaccttaatattgaacctatcaaacctagttgggttctcccacactgaccaaact |
40022854 |
T |
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| Q |
118 |
aaacattattcaatgtcttggataacttggatacatcacgtaccttacaaaaattcataaatccaaaatttccctcttgcatttctcttacgagacaaga |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40022855 |
aaacattattcaatgtcttggataacttggatacatcacgtaccttacaaaaattcataaatccaaaatttccctcttgcatttctcttacgagacaaga |
40022954 |
T |
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| Q |
218 |
aaacatcaatctagataccacatacctcgaagcccttcctcagttgaacataaggaacttgtttag |
283 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
40022955 |
aaacatcaatcaagataccacatacctcgaagcccttcctcagttgaacatatggaacttgtttag |
40023020 |
T |
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