View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12569_high_8 (Length: 219)
Name: NF12569_high_8
Description: NF12569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12569_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 7197390 - 7197482
Alignment:
| Q |
1 |
catagcctttaactcgcttttaacgaaaatcaatttt-tctgtcgcaggaaattcttgcaattgtctatcagggcaatcatcgcttgatgaag |
92 |
Q |
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| T |
7197390 |
catagccttaaactcgcttttaacgaaaatcaattttctctatcgcaggaaattcttgcaattgtctatcagggcaaccatcacttgatgaag |
7197482 |
T |
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Target: chr7; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 7197563 - 7197609
Alignment:
| Q |
173 |
tcatttgctggtctagaatcaacaagagaagaacatgaagaagaata |
219 |
Q |
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| T |
7197563 |
tcatttgctggtctagaatcaacaagagaagaacatgaagaagaata |
7197609 |
T |
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