View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1256_low_10 (Length: 377)
Name: NF1256_low_10
Description: NF1256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1256_low_10 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 30 - 377
Target Start/End: Original strand, 14373017 - 14373367
Alignment:
| Q |
30 |
gaaactttgatgatgatcaatgtcgtcacctttaagtagaagttcaagattggtgttaatttgataaaaacagtttaattttgagtactaatatttgt-- |
127 |
Q |
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| T |
14373017 |
gaaactttgatgatgatcaatgtcgtcacctttaagtagaagttcaagattggtgttaatttgataaaaacagtttaattttgagtactaatatttgttg |
14373116 |
T |
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| Q |
128 |
-tcttgttttttgaggttctaattacgaggtatgacattggttgttgtttgagttttgagcattaatatttgttttgttgaattgacaccgattggtcat |
226 |
Q |
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| T |
14373117 |
ttcttgttttttgaggttctaattacgaggtatgacattggttgttgtttgagttttgagcattaatatttgttttgttgaattgacactgattggtcat |
14373216 |
T |
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| Q |
227 |
gtttagttgtgctgacgagtaatactacgaggttttaccaacgaggattgacatggttgtagttaaagtttcgaacaattttcaagccttggttcgttgt |
326 |
Q |
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| T |
14373217 |
gtttagttgtgctgacgagtaatactacaaggttttaccaacgaggattgacatggttgtagttagagtttcgaacaattttcaagcattggttcgttgt |
14373316 |
T |
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| Q |
327 |
agactgtatatgccactgctttctttaaatatgttaatagttatctttgta |
377 |
Q |
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| T |
14373317 |
agactgtatatgccactgctttctttaaatatgttaatagttatctttgta |
14373367 |
T |
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