View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1256_low_14 (Length: 334)

Name: NF1256_low_14
Description: NF1256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1256_low_14
NF1256_low_14
[»] scaffold0456 (1 HSPs)
scaffold0456 (2-251)||(10098-10347)
[»] chr5 (79 HSPs)
chr5 (2-251)||(21292642-21292891)
chr5 (2-228)||(8286514-8286740)
chr5 (2-251)||(22075219-22075468)
chr5 (4-251)||(22107047-22107294)
chr5 (1-251)||(23390156-23390417)
chr5 (1-251)||(13095694-13095955)
chr5 (1-251)||(24493768-24494029)
chr5 (1-251)||(13025510-13025771)
chr5 (1-251)||(21985807-21986068)
chr5 (1-251)||(24529420-24529682)
chr5 (8-251)||(9078152-9078406)
chr5 (1-251)||(25421732-25421993)
chr5 (1-251)||(25431594-25431855)
chr5 (2-245)||(1096673-1096927)
chr5 (1-144)||(11580905-11581058)
chr5 (1-142)||(36154488-36154639)
chr5 (2-137)||(22119854-22119998)
chr5 (2-76)||(19660498-19660572)
chr5 (2-76)||(21871232-21871306)
chr5 (2-76)||(21875512-21875586)
chr5 (1-76)||(21565930-21566005)
chr5 (1-75)||(22959193-22959267)
chr5 (2-137)||(24766998-24767142)
chr5 (1-76)||(19669286-19669361)
chr5 (4-205)||(22144296-22144508)
chr5 (2-77)||(21329156-21329231)
chr5 (2-77)||(21498678-21498753)
chr5 (3-77)||(5888837-5888911)
chr5 (7-71)||(41294112-41294176)
chr5 (13-72)||(21294947-21295006)
chr5 (13-71)||(15441638-15441696)
chr5 (4-70)||(20026526-20026592)
chr5 (13-71)||(25406789-25406847)
chr5 (14-72)||(25535351-25535409)
chr5 (96-137)||(5888940-5888981)
chr5 (2-71)||(17284430-17284499)
chr5 (100-137)||(19660606-19660643)
chr5 (96-145)||(21501919-21501968)
chr5 (96-133)||(21565863-21565900)
chr5 (13-70)||(22588459-22588516)
chr5 (96-137)||(22959298-22959339)
chr5 (14-71)||(23336973-23337030)
chr5 (98-138)||(20026706-20026746)
chr5 (102-137)||(19472493-19472528)
chr5 (13-60)||(19992258-19992305)
chr5 (102-137)||(20296145-20296180)
chr5 (86-137)||(21340525-21340576)
chr5 (2-77)||(21741204-21741279)
chr5 (13-60)||(22334501-22334548)
chr5 (86-137)||(23201680-23201731)
chr5 (86-137)||(23535347-23535398)
chr5 (86-137)||(24532806-24532857)
chr5 (13-72)||(24554896-24554955)
chr5 (86-137)||(26665889-26665940)
chr5 (86-137)||(26937486-26937537)
chr5 (98-137)||(31342414-31342453)
chr5 (13-72)||(37286464-37286523)
chr5 (13-72)||(37293167-37293226)
chr5 (14-72)||(14359504-14359562)
chr5 (13-71)||(22133362-22133420)
chr5 (13-71)||(22140054-22140112)
chr5 (99-137)||(25744036-25744074)
chr5 (4-46)||(26732421-26732463)
chr5 (4-46)||(26740234-26740276)
chr5 (2-60)||(27517126-27517184)
chr5 (2-60)||(27523763-27523821)
chr5 (2-71)||(15236453-15236522)
chr5 (88-137)||(20232847-20232896)
chr5 (96-133)||(21741308-21741345)
chr5 (5-46)||(22177807-22177848)
chr5 (4-45)||(25574056-25574097)
chr5 (4-45)||(25575249-25575290)
chr5 (4-45)||(25576442-25576483)
chr5 (4-77)||(26011697-26011770)
chr5 (2-71)||(29471032-29471101)
chr5 (2-71)||(29477627-29477696)
chr5 (97-137)||(123074-123114)
chr5 (81-137)||(21871321-21871377)
chr5 (81-137)||(21875601-21875657)
[»] chr4 (77 HSPs)
chr4 (2-251)||(14052974-14053223)
chr4 (2-251)||(3096843-3097092)
chr4 (2-251)||(12902957-12903205)
chr4 (2-251)||(7089077-7089326)
chr4 (1-251)||(44053029-44053290)
chr4 (2-228)||(17047745-17047970)
chr4 (1-251)||(22636634-22636895)
chr4 (1-257)||(16377182-16377450)
chr4 (1-251)||(14038848-14039110)
chr4 (1-181)||(7798967-7799158)
chr4 (4-251)||(15091096-15091355)
chr4 (79-251)||(7893900-7894073)
chr4 (96-248)||(23374125-23374277)
chr4 (1-205)||(44928583-44928798)
chr4 (125-249)||(16239764-16239889)
chr4 (2-76)||(16597031-16597105)
chr4 (1-142)||(44102520-44102670)
chr4 (1-76)||(6190819-6190894)
chr4 (1-76)||(20156950-20157025)
chr4 (2-76)||(15552199-15552273)
chr4 (1-76)||(16239652-16239728)
chr4 (2-137)||(24029057-24029201)
chr4 (4-76)||(22633876-22633948)
chr4 (131-225)||(6190688-6190782)
chr4 (2-137)||(13812470-13812614)
chr4 (1-138)||(21814963-21815109)
chr4 (1-138)||(21815292-21815438)
chr4 (1-138)||(21818385-21818531)
chr4 (1-75)||(12774385-12774459)
chr4 (3-76)||(8846761-8846834)
chr4 (2-77)||(39705949-39706024)
chr4 (13-60)||(17046718-17046765)
chr4 (2-77)||(43198249-43198324)
chr4 (4-77)||(52242856-52242929)
chr4 (2-77)||(15099735-15099810)
chr4 (4-73)||(15464592-15464661)
chr4 (2-74)||(15868296-15868368)
chr4 (211-251)||(17046684-17046724)
chr4 (13-72)||(14685534-14685593)
chr4 (2-77)||(15190702-15190777)
chr4 (96-138)||(12774313-12774355)
chr4 (8-72)||(14679325-14679389)
chr4 (98-137)||(3332201-3332240)
chr4 (13-72)||(23838796-23838855)
chr4 (4-74)||(13436-13506)
chr4 (13-71)||(386038-386096)
chr4 (13-71)||(7900855-7900913)
chr4 (13-71)||(15321778-15321836)
chr4 (99-137)||(22633980-22634018)
chr4 (2-72)||(40471837-40471907)
chr4 (13-71)||(51493502-51493560)
chr4 (2-51)||(13844950-13844999)
chr4 (96-137)||(15099665-15099706)
chr4 (100-137)||(15552129-15552166)
chr4 (2-71)||(40478511-40478580)
chr4 (96-205)||(15464694-15464805)
chr4 (102-137)||(4561107-4561142)
chr4 (102-137)||(5756711-5756746)
chr4 (86-137)||(19757359-19757410)
chr4 (86-137)||(19782396-19782447)
chr4 (98-137)||(20157056-20157095)
chr4 (16-71)||(26284595-26284650)
chr4 (2-45)||(32851868-32851911)
chr4 (102-137)||(33742675-33742710)
chr4 (86-137)||(45938444-45938495)
chr4 (13-71)||(6873060-6873118)
chr4 (14-72)||(12522447-12522505)
chr4 (4-46)||(32306582-32306624)
chr4 (18-72)||(35170991-35171045)
chr4 (14-72)||(41385430-41385488)
chr4 (96-138)||(52242958-52243000)
chr4 (96-137)||(8846689-8846730)
chr4 (13-58)||(16956334-16956379)
chr4 (2-74)||(12287794-12287866)
chr4 (86-134)||(26243423-26243471)
chr4 (96-136)||(39706052-39706092)
chr4 (4-76)||(53081760-53081832)
[»] scaffold0113 (1 HSPs)
scaffold0113 (2-251)||(32264-32513)
[»] chr7 (78 HSPs)
chr7 (2-251)||(40443589-40443837)
chr7 (2-251)||(27847505-27847754)
chr7 (2-251)||(16385919-16386168)
chr7 (1-251)||(9509389-9509650)
chr7 (2-251)||(26212196-26212445)
chr7 (1-251)||(12699032-12699293)
chr7 (1-251)||(38227680-38227941)
chr7 (3-245)||(3564026-3564279)
chr7 (103-251)||(10589238-10589386)
chr7 (2-250)||(15143698-15143957)
chr7 (1-141)||(44116816-44116965)
chr7 (1-142)||(17061620-17061771)
chr7 (1-138)||(12756377-12756523)
chr7 (2-76)||(15754548-15754622)
chr7 (2-137)||(28504962-28505106)
chr7 (2-137)||(2831967-2832110)
chr7 (2-76)||(9751211-9751285)
chr7 (2-133)||(39267307-39267447)
chr7 (2-76)||(18302564-18302638)
chr7 (3-76)||(44014560-44014633)
chr7 (1-76)||(810789-810864)
chr7 (2-73)||(34201172-34201243)
chr7 (2-77)||(47832193-47832268)
chr7 (2-51)||(11995719-11995768)
chr7 (4-77)||(12255454-12255527)
chr7 (12-77)||(16324391-16324456)
chr7 (1-77)||(68131-68207)
chr7 (2-77)||(22073301-22073376)
chr7 (1-51)||(18006052-18006102)
chr7 (4-73)||(2279781-2279850)
chr7 (2-77)||(16219377-16219452)
chr7 (96-164)||(16056616-16056684)
chr7 (2-77)||(9389356-9389431)
chr7 (13-72)||(14953560-14953619)
chr7 (13-72)||(14959526-14959585)
chr7 (98-137)||(18302494-18302533)
chr7 (2-77)||(21064823-21064898)
chr7 (13-72)||(26420340-26420399)
chr7 (13-72)||(44408043-44408102)
chr7 (96-138)||(810894-810936)
chr7 (15-72)||(11547953-11548010)
chr7 (15-72)||(11554549-11554606)
chr7 (5-74)||(14045212-14045281)
chr7 (5-74)||(14355242-14355311)
chr7 (12-77)||(16056713-16056778)
chr7 (2-71)||(20702664-20702733)
chr7 (96-145)||(22073223-22073272)
chr7 (2-71)||(32768038-32768107)
chr7 (2-46)||(2529638-2529682)
chr7 (98-137)||(9389462-9389501)
chr7 (98-137)||(9751316-9751355)
chr7 (13-60)||(11238655-11238702)
chr7 (98-137)||(11995796-11995835)
chr7 (13-72)||(12692858-12692917)
chr7 (102-137)||(12718966-12719001)
chr7 (102-137)||(12723877-12723912)
chr7 (15-74)||(12901793-12901852)
chr7 (17-72)||(14148932-14148987)
chr7 (86-137)||(16438792-16438843)
chr7 (102-137)||(16906974-16907009)
chr7 (86-137)||(17137820-17137871)
chr7 (102-137)||(18279701-18279736)
chr7 (102-137)||(18283664-18283699)
chr7 (98-137)||(34201099-34201138)
chr7 (99-137)||(68061-68099)
chr7 (13-71)||(4318229-4318287)
chr7 (4-70)||(9177252-9177318)
chr7 (14-72)||(11262691-11262749)
chr7 (4-46)||(11768526-11768568)
chr7 (96-138)||(12255556-12255598)
chr7 (14-72)||(25038895-25038953)
chr7 (2-71)||(70438-70507)
chr7 (2-71)||(74546-74615)
chr7 (5-74)||(1867650-1867719)
chr7 (4-45)||(15008107-15008148)
chr7 (14-71)||(18531608-18531665)
chr7 (96-137)||(44014489-44014530)
chr7 (8-60)||(14655095-14655147)
[»] scaffold0114 (1 HSPs)
scaffold0114 (5-251)||(15140-15386)
[»] scaffold0598 (1 HSPs)
scaffold0598 (2-251)||(724-973)
[»] chr3 (107 HSPs)
chr3 (2-251)||(20698108-20698357)
chr3 (1-251)||(17488056-17488318)
chr3 (11-251)||(13442474-13442725)
chr3 (4-250)||(40213384-40213641)
chr3 (1-251)||(26687087-26687348)
chr3 (1-251)||(17499538-17499800)
chr3 (1-251)||(18438734-18438995)
chr3 (2-228)||(30030062-30030288)
chr3 (2-251)||(12399409-12399655)
chr3 (1-251)||(14572788-14573049)
chr3 (1-251)||(11424423-11424684)
chr3 (1-251)||(14576493-14576754)
chr3 (1-248)||(14973057-14973315)
chr3 (1-251)||(25476045-25476306)
chr3 (1-251)||(23083021-23083282)
chr3 (1-145)||(17247946-17248100)
chr3 (2-127)||(16809724-16809845)
chr3 (74-200)||(43841183-43841309)
chr3 (1-138)||(53070359-53070505)
chr3 (2-76)||(12340138-12340212)
chr3 (2-76)||(14179708-14179782)
chr3 (123-251)||(16796747-16796875)
chr3 (2-73)||(4588476-4588547)
chr3 (1-68)||(43842572-43842639)
chr3 (1-75)||(49389304-49389378)
chr3 (1-73)||(9513299-9513371)
chr3 (1-73)||(9521274-9521346)
chr3 (4-137)||(12852027-12852169)
chr3 (1-76)||(12933970-12934045)
chr3 (1-72)||(32308058-32308129)
chr3 (2-76)||(13209989-13210062)
chr3 (14-76)||(14665991-14666053)
chr3 (14-76)||(14669146-14669208)
chr3 (14-76)||(14735504-14735566)
chr3 (1-74)||(16104168-16104241)
chr3 (1-57)||(17247180-17247236)
chr3 (1-76)||(49667744-49667818)
chr3 (4-70)||(324627-324693)
chr3 (1-51)||(12171777-12171827)
chr3 (1-73)||(1644343-1644415)
chr3 (1-73)||(16097719-16097791)
chr3 (2-71)||(2050862-2050931)
chr3 (4-76)||(52523390-52523462)
chr3 (2-77)||(1465070-1465145)
chr3 (2-77)||(15471309-15471384)
chr3 (96-138)||(1644447-1644489)
chr3 (96-138)||(32307983-32308025)
chr3 (96-138)||(49667848-49667890)
chr3 (2-71)||(14234881-14234950)
chr3 (4-73)||(22109938-22110007)
chr3 (13-72)||(839609-839668)
chr3 (98-137)||(12340068-12340107)
chr3 (86-137)||(19725669-19725720)
chr3 (13-72)||(24188140-24188199)
chr3 (13-72)||(55149341-55149400)
chr3 (96-138)||(12934075-12934117)
chr3 (2-71)||(15691950-15692019)
chr3 (2-71)||(23704441-23704510)
chr3 (2-71)||(23722897-23722966)
chr3 (2-71)||(23741353-23741422)
chr3 (2-71)||(41201470-41201539)
chr3 (4-45)||(43927597-43927638)
chr3 (2-46)||(14501615-14501659)
chr3 (14-137)||(20723298-20723422)
chr3 (2-70)||(23275133-23275201)
chr3 (86-137)||(1598238-1598289)
chr3 (86-137)||(3833971-3834022)
chr3 (102-137)||(7109999-7110034)
chr3 (102-137)||(7113934-7113969)
chr3 (98-137)||(14665921-14665960)
chr3 (98-137)||(14669076-14669115)
chr3 (98-137)||(14735434-14735473)
chr3 (86-137)||(17242269-17242320)
chr3 (102-137)||(22321965-22322000)
chr3 (102-137)||(22337020-22337055)
chr3 (102-137)||(27409417-27409452)
chr3 (86-137)||(38814681-38814732)
chr3 (4-46)||(316612-316654)
chr3 (96-138)||(324549-324591)
chr3 (2-76)||(605952-606026)
chr3 (2-60)||(13251095-13251153)
chr3 (2-60)||(13257741-13257799)
chr3 (95-137)||(16097645-16097687)
chr3 (13-59)||(41092030-41092076)
chr3 (96-138)||(42386725-42386767)
chr3 (4-46)||(45797659-45797701)
chr3 (96-134)||(49389408-49389446)
chr3 (96-137)||(1465174-1465215)
chr3 (13-58)||(4291149-4291194)
chr3 (96-133)||(9513228-9513265)
chr3 (96-133)||(9521203-9521240)
chr3 (2-71)||(11070435-11070504)
chr3 (2-71)||(11165202-11165271)
chr3 (100-137)||(13210096-13210133)
chr3 (2-71)||(14499692-14499761)
chr3 (2-71)||(15726604-15726673)
chr3 (13-58)||(17710275-17710320)
chr3 (14-71)||(28350846-28350903)
chr3 (2-71)||(30066313-30066382)
chr3 (97-138)||(37250932-37250973)
chr3 (2-71)||(55023212-55023281)
chr3 (96-136)||(12171869-12171909)
chr3 (2-46)||(12378412-12378456)
chr3 (97-137)||(22110116-22110156)
chr3 (2-46)||(23412834-23412878)
chr3 (8-60)||(53380030-53380082)
chr3 (8-60)||(53386682-53386734)
[»] scaffold0427 (1 HSPs)
scaffold0427 (2-251)||(13695-13944)
[»] chr2 (44 HSPs)
chr2 (2-251)||(20309305-20309554)
chr2 (2-248)||(37788-38034)
chr2 (2-251)||(23286061-23286310)
chr2 (1-251)||(298475-298735)
chr2 (2-251)||(23654071-23654307)
chr2 (1-251)||(27753775-27754036)
chr2 (1-225)||(32451589-32451824)
chr2 (1-251)||(22737840-22738101)
chr2 (1-251)||(22730893-22731155)
chr2 (1-251)||(23076642-23076901)
chr2 (1-251)||(22337315-22337576)
chr2 (1-246)||(23660227-23660483)
chr2 (2-137)||(23071624-23071768)
chr2 (1-72)||(22133877-22133948)
chr2 (2-66)||(28291963-28292027)
chr2 (5-73)||(28406368-28406436)
chr2 (2-77)||(25176227-25176302)
chr2 (93-136)||(22133977-22134020)
chr2 (86-137)||(22740717-22740768)
chr2 (13-72)||(24503473-24503532)
chr2 (13-71)||(12829434-12829492)
chr2 (4-50)||(39827602-39827648)
chr2 (4-72)||(23207744-23207812)
chr2 (96-205)||(23708383-23708493)
chr2 (102-137)||(12901286-12901321)
chr2 (86-137)||(22460948-22460999)
chr2 (147-246)||(23060717-23060815)
chr2 (13-60)||(23171413-23171460)
chr2 (13-60)||(23582670-23582717)
chr2 (102-137)||(24628252-24628287)
chr2 (102-137)||(24649654-24649689)
chr2 (102-137)||(27379206-27379241)
chr2 (102-137)||(27383252-27383287)
chr2 (102-137)||(27602094-27602129)
chr2 (102-137)||(41530783-41530818)
chr2 (13-71)||(21138955-21139013)
chr2 (4-74)||(22412722-22412792)
chr2 (4-46)||(23005221-23005263)
chr2 (18-72)||(27197248-27197302)
chr2 (96-134)||(28406297-28406335)
chr2 (4-46)||(34137412-34137454)
chr2 (95-136)||(25176158-25176199)
chr2 (101-137)||(31756232-31756268)
chr2 (10-58)||(37318652-37318700)
[»] scaffold1842 (1 HSPs)
scaffold1842 (2-248)||(721-967)
[»] scaffold0011 (2 HSPs)
scaffold0011 (2-248)||(167651-167897)
scaffold0011 (1-251)||(52113-52373)
[»] chr8 (58 HSPs)
chr8 (2-251)||(31971455-31971704)
chr8 (2-251)||(16199319-16199567)
chr8 (2-251)||(21918671-21918921)
chr8 (2-251)||(25362812-25363061)
chr8 (1-251)||(18878897-18879158)
chr8 (2-251)||(20536408-20536668)
chr8 (2-251)||(45130692-45130919)
chr8 (1-251)||(18818070-18818330)
chr8 (1-251)||(21923588-21923849)
chr8 (1-204)||(23406628-23406842)
chr8 (1-251)||(28648704-28648965)
chr8 (1-251)||(6759456-6759718)
chr8 (1-251)||(22626935-22627196)
chr8 (1-250)||(23648754-23649014)
chr8 (1-246)||(16092001-16092257)
chr8 (1-251)||(22875265-22875526)
chr8 (2-142)||(41598494-41598644)
chr8 (1-251)||(7372970-7373210)
chr8 (2-137)||(5865938-5866082)
chr8 (2-73)||(17141302-17141373)
chr8 (2-76)||(21255605-21255679)
chr8 (2-72)||(21491382-21491452)
chr8 (2-76)||(21249767-21249841)
chr8 (12-76)||(21674091-21674155)
chr8 (1-77)||(19801087-19801163)
chr8 (1-76)||(26355358-26355433)
chr8 (2-77)||(38854912-38854987)
chr8 (2-77)||(39834217-39834292)
chr8 (2-51)||(6520779-6520828)
chr8 (4-73)||(20499049-20499118)
chr8 (12-77)||(23760511-23760576)
chr8 (2-70)||(21414888-21414956)
chr8 (13-72)||(20527812-20527871)
chr8 (13-71)||(18865695-18865753)
chr8 (100-137)||(17141229-17141266)
chr8 (100-137)||(21249697-21249734)
chr8 (2-71)||(29123449-29123518)
chr8 (4-73)||(37116813-37116882)
chr8 (96-137)||(39834147-39834188)
chr8 (4-72)||(17266579-17266647)
chr8 (2-45)||(13507670-13507713)
chr8 (2-45)||(13597202-13597245)
chr8 (86-137)||(15538745-15538796)
chr8 (86-137)||(24433995-24434046)
chr8 (102-137)||(43252110-43252145)
chr8 (12-46)||(17085770-17085804)
chr8 (13-71)||(18855300-18855358)
chr8 (12-74)||(24353488-24353550)
chr8 (4-73)||(982989-983058)
chr8 (100-137)||(21255535-21255572)
chr8 (8-60)||(19111601-19111653)
chr8 (8-60)||(19117892-19117944)
chr8 (96-136)||(21674021-21674061)
chr8 (97-137)||(21972353-21972393)
chr8 (97-137)||(21976438-21976478)
chr8 (97-137)||(37116664-37116704)
chr8 (96-136)||(38855015-38855055)
chr8 (4-72)||(40492438-40492506)
[»] chr6 (65 HSPs)
chr6 (2-251)||(20637955-20638204)
chr6 (1-251)||(20360631-20360881)
chr6 (2-225)||(18821491-18821714)
chr6 (2-248)||(16920305-16920551)
chr6 (2-251)||(22831702-22831951)
chr6 (2-239)||(11185714-11185951)
chr6 (1-251)||(22779887-22780148)
chr6 (1-251)||(18409487-18409748)
chr6 (1-251)||(19303201-19303462)
chr6 (1-251)||(29060740-29061001)
chr6 (2-251)||(17287457-17287717)
chr6 (1-251)||(20593973-20594234)
chr6 (2-251)||(25629016-25629276)
chr6 (1-138)||(28496133-28496280)
chr6 (1-138)||(29808543-29808691)
chr6 (1-138)||(18457029-18457175)
chr6 (2-76)||(1561689-1561763)
chr6 (2-137)||(21939699-21939843)
chr6 (1-76)||(19652581-19652656)
chr6 (2-76)||(4189342-4189416)
chr6 (2-76)||(4667874-4667948)
chr6 (2-76)||(4674721-4674795)
chr6 (2-76)||(31155059-31155133)
chr6 (2-137)||(15894091-15894237)
chr6 (2-137)||(25611384-25611530)
chr6 (2-77)||(23019792-23019867)
chr6 (2-76)||(4185484-4185558)
chr6 (2-76)||(22334543-22334617)
chr6 (2-76)||(27332945-27333019)
chr6 (2-76)||(27393685-27393759)
chr6 (13-76)||(25603057-25603120)
chr6 (2-137)||(22080398-22080543)
chr6 (14-72)||(31164531-31164589)
chr6 (13-72)||(22331803-22331862)
chr6 (86-137)||(22334648-22334699)
chr6 (86-137)||(25641940-25641991)
chr6 (13-71)||(1538628-1538686)
chr6 (13-71)||(1544727-1544785)
chr6 (96-137)||(4185588-4185629)
chr6 (96-137)||(4667978-4668019)
chr6 (14-71)||(16372223-16372280)
chr6 (88-133)||(25603143-25603188)
chr6 (4-72)||(20109605-20109673)
chr6 (96-136)||(27333049-27333089)
chr6 (96-136)||(27393789-27393829)
chr6 (102-137)||(8244158-8244193)
chr6 (102-137)||(11567160-11567195)
chr6 (86-137)||(12496605-12496656)
chr6 (96-135)||(19652512-19652551)
chr6 (102-137)||(19870888-19870923)
chr6 (102-137)||(22863243-22863278)
chr6 (102-137)||(23395366-23395401)
chr6 (13-72)||(34295751-34295810)
chr6 (3-77)||(25956283-25956357)
chr6 (14-60)||(30694738-30694784)
chr6 (13-58)||(14099004-14099049)
chr6 (13-58)||(14472647-14472692)
chr6 (92-137)||(16924642-16924687)
chr6 (92-137)||(16929357-16929402)
chr6 (96-137)||(31155163-31155204)
chr6 (14-71)||(34369658-34369715)
chr6 (97-137)||(19668688-19668728)
chr6 (97-137)||(23657189-23657229)
chr6 (8-60)||(27327735-27327787)
chr6 (8-60)||(27388475-27388527)
[»] scaffold0309 (1 HSPs)
scaffold0309 (2-250)||(6811-7059)
[»] scaffold0718 (1 HSPs)
scaffold0718 (2-251)||(4803-5052)
[»] scaffold0235 (2 HSPs)
scaffold0235 (2-251)||(11185-11434)
scaffold0235 (2-46)||(14055-14099)
[»] scaffold0490 (1 HSPs)
scaffold0490 (2-238)||(2165-2401)
[»] chr1 (60 HSPs)
chr1 (4-251)||(38801065-38801312)
chr1 (2-251)||(27250401-27250650)
chr1 (1-251)||(21026880-21027130)
chr1 (2-251)||(22355846-22356095)
chr1 (2-251)||(22357532-22357781)
chr1 (1-228)||(20846890-20847117)
chr1 (3-251)||(50209875-50210134)
chr1 (2-251)||(22354233-22354493)
chr1 (3-248)||(34509983-34510239)
chr1 (1-228)||(22532492-22532730)
chr1 (1-251)||(20135387-20135648)
chr1 (1-145)||(433314-433468)
chr1 (1-137)||(20918917-20919062)
chr1 (2-76)||(52927642-52927716)
chr1 (1-74)||(21754423-21754496)
chr1 (1-160)||(33681301-33681470)
chr1 (2-77)||(22921528-22921603)
chr1 (5-75)||(20248664-20248734)
chr1 (2-73)||(21162117-21162188)
chr1 (1-48)||(21301198-21301245)
chr1 (1-76)||(22238015-22238090)
chr1 (2-137)||(20091135-20091281)
chr1 (2-77)||(43697745-43697820)
chr1 (96-138)||(21754350-21754392)
chr1 (13-72)||(20524899-20524958)
chr1 (13-72)||(21438157-21438216)
chr1 (13-72)||(23763574-23763633)
chr1 (2-73)||(28194109-28194180)
chr1 (7-74)||(35981352-35981419)
chr1 (13-71)||(19063884-19063942)
chr1 (13-71)||(19111774-19111832)
chr1 (4-74)||(21895895-21895965)
chr1 (96-137)||(20637165-20637206)
chr1 (96-137)||(21162080-21162121)
chr1 (4-73)||(35260718-35260787)
chr1 (4-76)||(16367873-16367945)
chr1 (2-74)||(41049629-41049701)
chr1 (86-137)||(12647166-12647217)
chr1 (102-137)||(16375231-16375266)
chr1 (2-73)||(16759115-16759186)
chr1 (102-137)||(21407653-21407688)
chr1 (15-74)||(26065382-26065441)
chr1 (102-137)||(52639839-52639874)
chr1 (4-50)||(16381652-16381698)
chr1 (13-71)||(19105117-19105175)
chr1 (13-71)||(21829078-21829136)
chr1 (13-71)||(21844591-21844649)
chr1 (4-74)||(21861157-21861227)
chr1 (4-46)||(52940464-52940506)
chr1 (2-71)||(1011087-1011156)
chr1 (96-137)||(20248592-20248633)
chr1 (95-136)||(22921631-22921672)
chr1 (97-138)||(26065254-26065295)
chr1 (96-137)||(28194213-28194254)
chr1 (96-137)||(35981451-35981492)
chr1 (95-136)||(52927745-52927786)
chr1 (4-76)||(16093479-16093551)
chr1 (2-46)||(21342564-21342608)
chr1 (2-46)||(21347429-21347473)
chr1 (97-137)||(45310135-45310175)
[»] scaffold0358 (2 HSPs)
scaffold0358 (2-251)||(135-385)
scaffold0358 (2-251)||(4911-5161)
[»] scaffold0351 (1 HSPs)
scaffold0351 (2-251)||(16479-16728)
[»] scaffold0032 (1 HSPs)
scaffold0032 (2-251)||(51779-52028)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-251)||(13411-13661)
[»] scaffold0064 (1 HSPs)
scaffold0064 (2-227)||(47210-47435)
[»] scaffold0165 (3 HSPs)
scaffold0165 (2-251)||(3681-3930)
scaffold0165 (2-251)||(7745-7994)
scaffold0165 (4-74)||(27305-27375)
[»] scaffold0305 (1 HSPs)
scaffold0305 (1-251)||(20603-20864)
[»] scaffold0484 (1 HSPs)
scaffold0484 (2-251)||(1114-1363)
[»] scaffold0145 (1 HSPs)
scaffold0145 (1-251)||(38960-39220)
[»] scaffold0021 (4 HSPs)
scaffold0021 (1-251)||(124785-125043)
scaffold0021 (1-76)||(62947-63022)
scaffold0021 (97-138)||(136132-136173)
scaffold0021 (97-138)||(144840-144881)
[»] scaffold0034 (3 HSPs)
scaffold0034 (1-225)||(51544-51779)
scaffold0034 (4-77)||(32921-32994)
scaffold0034 (96-162)||(32826-32892)
[»] scaffold0106 (2 HSPs)
scaffold0106 (4-248)||(1489-1733)
scaffold0106 (4-248)||(7466-7710)
[»] scaffold0292 (2 HSPs)
scaffold0292 (4-248)||(3673-3928)
scaffold0292 (1-246)||(547-803)
[»] scaffold0042 (2 HSPs)
scaffold0042 (1-251)||(23962-24222)
scaffold0042 (86-137)||(64150-64201)
[»] scaffold0175 (2 HSPs)
scaffold0175 (1-251)||(13292-13553)
scaffold0175 (2-136)||(34437-34580)
[»] scaffold0016 (3 HSPs)
scaffold0016 (1-251)||(2051-2312)
scaffold0016 (2-137)||(207180-207324)
scaffold0016 (4-45)||(119214-119255)
[»] scaffold0403 (1 HSPs)
scaffold0403 (2-228)||(5072-5297)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-245)||(5781-6036)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-250)||(16875-17135)
scaffold0056 (2-75)||(79023-79096)
[»] scaffold0639 (1 HSPs)
scaffold0639 (1-251)||(8675-8936)
[»] scaffold0122 (2 HSPs)
scaffold0122 (1-248)||(25725-25983)
scaffold0122 (1-245)||(33154-33410)
[»] scaffold0080 (2 HSPs)
scaffold0080 (1-251)||(40112-40372)
scaffold0080 (86-137)||(18413-18464)
[»] scaffold0088 (1 HSPs)
scaffold0088 (2-251)||(21111-21350)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-251)||(339611-339871)
[»] scaffold0121 (1 HSPs)
scaffold0121 (7-204)||(8198-8406)
[»] scaffold0026 (7 HSPs)
scaffold0026 (5-251)||(40057-40313)
scaffold0026 (1-76)||(39591-39666)
scaffold0026 (134-251)||(26095-26213)
scaffold0026 (17-73)||(59179-59235)
scaffold0026 (25-76)||(26611-26662)
scaffold0026 (100-137)||(59271-59308)
scaffold0026 (88-122)||(26555-26589)
[»] scaffold0231 (1 HSPs)
scaffold0231 (1-251)||(23082-23343)
[»] scaffold0228 (3 HSPs)
scaffold0228 (1-251)||(4707-4969)
scaffold0228 (1-251)||(12289-12551)
scaffold0228 (1-251)||(22241-22503)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-251)||(16259-16521)
[»] scaffold0627 (1 HSPs)
scaffold0627 (1-192)||(163-365)
[»] scaffold0352 (1 HSPs)
scaffold0352 (2-251)||(17669-17908)
[»] scaffold0395 (1 HSPs)
scaffold0395 (1-228)||(622-861)
[»] scaffold0389 (1 HSPs)
scaffold0389 (2-116)||(13269-13383)
[»] scaffold0120 (4 HSPs)
scaffold0120 (10-205)||(16333-16539)
scaffold0120 (2-214)||(32620-32843)
scaffold0120 (2-73)||(46314-46385)
scaffold0120 (101-214)||(46162-46276)
[»] scaffold0141 (1 HSPs)
scaffold0141 (92-248)||(39679-39836)
[»] scaffold0049 (1 HSPs)
scaffold0049 (92-248)||(74976-75133)
[»] scaffold0540 (2 HSPs)
scaffold0540 (1-155)||(673-837)
scaffold0540 (166-251)||(2987-3072)
[»] scaffold0130 (2 HSPs)
scaffold0130 (90-251)||(28030-28192)
scaffold0130 (1-74)||(28924-28997)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-138)||(20426-20573)
[»] scaffold0142 (3 HSPs)
scaffold0142 (1-142)||(17090-17241)
scaffold0142 (41-76)||(7471-7506)
scaffold0142 (98-137)||(7537-7576)
[»] scaffold0084 (2 HSPs)
scaffold0084 (90-251)||(10363-10525)
scaffold0084 (1-54)||(10566-10619)
[»] scaffold0839 (1 HSPs)
scaffold0839 (1-145)||(1738-1891)
[»] scaffold0266 (1 HSPs)
scaffold0266 (1-76)||(18618-18693)
[»] scaffold0876 (1 HSPs)
scaffold0876 (2-76)||(2746-2820)
[»] scaffold0413 (2 HSPs)
scaffold0413 (1-142)||(15275-15426)
scaffold0413 (4-73)||(13033-13102)
[»] scaffold0161 (1 HSPs)
scaffold0161 (2-137)||(2106-2250)
[»] scaffold0221 (1 HSPs)
scaffold0221 (2-134)||(12470-12611)
[»] scaffold0218 (1 HSPs)
scaffold0218 (2-72)||(28941-29011)
[»] scaffold0075 (3 HSPs)
scaffold0075 (2-76)||(7955-8029)
scaffold0075 (4-74)||(53134-53204)
scaffold0075 (100-137)||(8062-8099)
[»] scaffold0503 (1 HSPs)
scaffold0503 (1-138)||(12243-12389)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-134)||(20086-20228)
[»] scaffold0261 (2 HSPs)
scaffold0261 (1-73)||(16047-16119)
scaffold0261 (100-137)||(15974-16011)
[»] scaffold0347 (1 HSPs)
scaffold0347 (14-137)||(344-476)
[»] scaffold0192 (1 HSPs)
scaffold0192 (2-137)||(10226-10370)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-66)||(10540-10605)
[»] scaffold0070 (2 HSPs)
scaffold0070 (2-251)||(4723-4983)
scaffold0070 (86-137)||(10200-10251)
[»] scaffold0556 (3 HSPs)
scaffold0556 (1-76)||(7197-7272)
scaffold0556 (2-77)||(8401-8476)
scaffold0556 (96-137)||(7126-7167)
[»] scaffold0211 (2 HSPs)
scaffold0211 (1-72)||(28469-28540)
scaffold0211 (96-138)||(28574-28616)
[»] scaffold0150 (2 HSPs)
scaffold0150 (1-76)||(32469-32544)
scaffold0150 (96-138)||(32397-32439)
[»] scaffold0028 (5 HSPs)
scaffold0028 (1-76)||(133039-133114)
scaffold0028 (96-138)||(132967-133009)
scaffold0028 (102-137)||(58492-58527)
scaffold0028 (13-71)||(41901-41959)
scaffold0028 (13-71)||(57408-57466)
[»] scaffold0166 (1 HSPs)
scaffold0166 (2-137)||(9495-9639)
[»] scaffold0037 (1 HSPs)
scaffold0037 (14-137)||(80005-80137)
[»] scaffold0001 (3 HSPs)
scaffold0001 (1-75)||(161072-161146)
scaffold0001 (4-46)||(446965-447007)
scaffold0001 (4-46)||(497896-497938)
[»] scaffold0247 (2 HSPs)
scaffold0247 (1-70)||(6488-6557)
scaffold0247 (97-161)||(6561-6625)
[»] scaffold0810 (1 HSPs)
scaffold0810 (1-77)||(3317-3393)
[»] scaffold0102 (2 HSPs)
scaffold0102 (1-76)||(19652-19727)
scaffold0102 (96-145)||(19573-19622)
[»] scaffold0475 (2 HSPs)
scaffold0475 (2-76)||(9462-9536)
scaffold0475 (96-137)||(9391-9432)
[»] scaffold0124 (1 HSPs)
scaffold0124 (2-137)||(24312-24456)
[»] scaffold0023 (2 HSPs)
scaffold0023 (1-75)||(101781-101855)
scaffold0023 (94-138)||(101709-101753)
[»] scaffold0628 (2 HSPs)
scaffold0628 (1-73)||(2463-2535)
scaffold0628 (96-138)||(2567-2609)
[»] scaffold1984 (1 HSPs)
scaffold1984 (12-145)||(437-580)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-75)||(2304-2378)
[»] scaffold0125 (2 HSPs)
scaffold0125 (1-74)||(45449-45522)
scaffold0125 (96-137)||(45555-45596)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-77)||(5978-6054)
[»] scaffold0138 (4 HSPs)
scaffold0138 (2-77)||(13325-13400)
scaffold0138 (14-72)||(29892-29950)
scaffold0138 (14-72)||(41888-41946)
scaffold0138 (96-137)||(13255-13296)
[»] scaffold0116 (2 HSPs)
scaffold0116 (2-77)||(43445-43520)
scaffold0116 (2-77)||(47365-47440)
[»] scaffold0078 (2 HSPs)
scaffold0078 (3-77)||(10913-10987)
scaffold0078 (96-138)||(10842-10884)
[»] scaffold1137 (2 HSPs)
scaffold1137 (1-70)||(1961-2030)
scaffold1137 (96-138)||(2066-2108)
[»] scaffold0530 (1 HSPs)
scaffold0530 (3-68)||(690-755)
[»] scaffold0320 (1 HSPs)
scaffold0320 (4-77)||(12380-12453)
[»] scaffold0020 (1 HSPs)
scaffold0020 (2-77)||(15491-15566)
[»] scaffold0621 (1 HSPs)
scaffold0621 (12-77)||(6922-6987)
[»] scaffold0555 (4 HSPs)
scaffold0555 (2-51)||(10229-10278)
scaffold0555 (2-76)||(965-1039)
scaffold0555 (86-133)||(897-944)
scaffold0555 (96-138)||(10305-10347)
[»] scaffold0012 (1 HSPs)
scaffold0012 (12-77)||(227877-227942)
[»] scaffold0243 (1 HSPs)
scaffold0243 (3-71)||(5784-5852)
[»] scaffold0010 (5 HSPs)
scaffold0010 (1-77)||(130292-130368)
scaffold0010 (96-137)||(130222-130263)
scaffold0010 (13-72)||(242420-242479)
scaffold0010 (4-70)||(60301-60367)
scaffold0010 (97-138)||(60479-60520)
[»] scaffold0507 (2 HSPs)
scaffold0507 (2-77)||(7718-7793)
scaffold0507 (96-138)||(7822-7864)
[»] scaffold0333 (2 HSPs)
scaffold0333 (2-77)||(6998-7073)
scaffold0333 (2-77)||(14378-14453)
[»] scaffold0022 (2 HSPs)
scaffold0022 (4-74)||(80726-80796)
scaffold0022 (97-137)||(128735-128775)
[»] scaffold0423 (1 HSPs)
scaffold0423 (2-39)||(10933-10970)
[»] scaffold0586 (1 HSPs)
scaffold0586 (2-70)||(2245-2313)
[»] scaffold0004 (2 HSPs)
scaffold0004 (13-72)||(58102-58161)
scaffold0004 (4-70)||(332784-332850)
[»] scaffold0525 (1 HSPs)
scaffold0525 (13-71)||(3560-3618)
[»] scaffold0259 (1 HSPs)
scaffold0259 (13-71)||(10541-10599)
[»] scaffold0233 (1 HSPs)
scaffold0233 (13-71)||(14224-14282)
[»] scaffold0109 (2 HSPs)
scaffold0109 (13-71)||(27006-27064)
scaffold0109 (2-46)||(35531-35575)
[»] scaffold0076 (1 HSPs)
scaffold0076 (3-77)||(24182-24256)
[»] scaffold0029 (4 HSPs)
scaffold0029 (13-71)||(125797-125855)
scaffold0029 (102-137)||(61386-61421)
scaffold0029 (104-137)||(65304-65337)
scaffold0029 (14-71)||(105563-105620)
[»] scaffold0013 (1 HSPs)
scaffold0013 (13-71)||(9704-9762)
[»] scaffold0005 (2 HSPs)
scaffold0005 (2-71)||(307460-307529)
scaffold0005 (4-74)||(268116-268186)
[»] scaffold0123 (1 HSPs)
scaffold0123 (4-76)||(25568-25640)
[»] scaffold0040 (1 HSPs)
scaffold0040 (2-74)||(103244-103316)
[»] scaffold0560 (1 HSPs)
scaffold0560 (13-72)||(5482-5541)
[»] scaffold0372 (1 HSPs)
scaffold0372 (102-137)||(4875-4910)
[»] scaffold0256 (2 HSPs)
scaffold0256 (14-77)||(24660-24723)
scaffold0256 (14-72)||(19817-19875)
[»] scaffold0210 (2 HSPs)
scaffold0210 (86-137)||(21563-21614)
scaffold0210 (86-137)||(29455-29506)
[»] scaffold0780 (1 HSPs)
scaffold0780 (13-71)||(478-536)
[»] scaffold0601 (1 HSPs)
scaffold0601 (4-74)||(7118-7188)
[»] scaffold0370 (1 HSPs)
scaffold0370 (18-72)||(17421-17475)
[»] scaffold0357 (3 HSPs)
scaffold0357 (4-74)||(13595-13665)
scaffold0357 (99-214)||(15866-15983)
scaffold0357 (2-70)||(3162-3230)
[»] scaffold0349 (1 HSPs)
scaffold0349 (2-72)||(12785-12855)
[»] scaffold0216 (1 HSPs)
scaffold0216 (13-71)||(8561-8619)
[»] scaffold0077 (1 HSPs)
scaffold0077 (4-46)||(55271-55313)
[»] scaffold0156 (1 HSPs)
scaffold0156 (14-59)||(3148-3193)
[»] scaffold0044 (2 HSPs)
scaffold0044 (2-71)||(8423-8492)
scaffold0044 (102-138)||(62556-62592)
[»] scaffold0184 (1 HSPs)
scaffold0184 (97-137)||(3993-4033)
[»] scaffold0180 (1 HSPs)
scaffold0180 (15-71)||(3073-3129)
[»] scaffold0139 (1 HSPs)
scaffold0139 (2-74)||(38761-38833)
[»] scaffold0098 (1 HSPs)
scaffold0098 (2-46)||(29177-29221)
[»] scaffold0017 (1 HSPs)
scaffold0017 (102-138)||(192757-192793)


Alignment Details
Target: scaffold0456 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 10098 - 10347
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10098 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 10197  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  10198 actcgccacggggagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgaccattgttgcacgagttgtcgagagttg 10297  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10298 aacccttgggtagaattaagacttaataataaggttaattataatctgtg 10347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 79)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 21292642 - 21292891
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21292642 ccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattgaacctggaattaaacttgtggaattctgacctga 21292741  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| | |||||||| ||||||    
T  21292742 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaatagagtgactttttagattttgcgacctttgttgcacgagttgtcgggagttg 21292841  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21292842 gacccttgggtaggattaagacttaataatgaggttaattataatctgtg 21292891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 2 - 228
Target Start/End: Original strand, 8286514 - 8286740
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  8286514 ccttagatgcatttgagtgccggaacatgtctaataatgattaagaaagaatgtaggatgagattgaacctggaatgaaacttgtgggattctgacctaa 8286613  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||    
T  8286614 actagccatggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcttgagttgttgagagttg 8286713  T
Q  202 aacccttgggtaggattaagacttaat 228  Q
    |||| |||||||| |||||||||||||    
T  8286714 aacctttgggtagtattaagacttaat 8286740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 22075468 - 22075219
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||| ||||||||| | |||||||||||    
T  22075468 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgaaaatgaacctggaatgaaacttgtgaggttctgacctga 22075369  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccag-aaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagtt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| | |||||| |||  ||    
T  22075368 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaaacagagtgacttgttag-ttttgcgacctttgttgcacgagttgttgaggatt 22075270  T
Q  201 gaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
     |||| |||||||| ||||||||||||| |  |||||||||||||| ||||    
T  22075269 aaacctttgggtagcattaagacttaatgaagaggttaattataatatgtg 22075219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 4 - 251
Target Start/End: Original strand, 22107047 - 22107294
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctgaac 103  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  22107047 ttagatgcgtttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggacgagattgaacctgaaattaaacttgtgggattctgacctgaac 22107146  T
Q  104 tcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttgaa 203  Q
    || ||| ||||||||||||||||||||||||||||||||| |||| |||||| ||||| | | ||||||||||||||||| | |||||| ||||| ||||    
T  22107147 tcaccatggcgagcagaggctctcgcctcgcgagtgacccggaaatagagtgccttgtgatactttgcgacctttgttgcacgagttgttgagagatgaa 22107246  T
Q  204 cccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    || ||| |||| ||||||||||||| |  |||||||||||||||||||    
T  22107247 cctttgagtagtattaagacttaatgaagaggttaattataatctgtg 22107294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 23390156 - 23390417
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           | |||||||||||    
T  23390156 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggg 23390255  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||| |||||| ||||||| ||||||| ||||||||||  |||||||||| |||||||||||||| |||||||||||| | |||    
T  23390256 attctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccctaaaacagagtgccttgttagattttgtgacctttgttgcacgagt 23390355  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||||||||||||| | || ||| ||||||||||||| |  | |||||||||||||||||    
T  23390356 tgtcgagagttgaaccttgggatagtattaagacttaatgaggatgttaattataatctgtg 23390417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 13095955 - 13095694
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||          | ||||||||||||    
T  13095955 tccttagatgcttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagatttagaatgaaacttgtggga 13095856  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||| | |||    
T  13095855 ttctgacctgaactcgccacagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgacttgttaggtttttgcgacctttgttgcacgagt 13095756  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
     || |||||||||||| | |||||| ||||||||||||| || | |||||||||||| ||||    
T  13095755 cgttgagagttgaaccttggggtagtattaagacttaatgatgatgttaattataatatgtg 13095694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 24494029 - 24493768
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    |||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||          | |||||| | |||    
T  24494029 tccttaaatgcttttgaacgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatttagaatgaaactttttgga 24493930  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||| ||||| |||||||||| ||||||| | |||||||||||||||||| | |||    
T  24493929 ttctgacctgaactcgccacggcgagcagaggctttcgcctcgtgagtaacccataaacagagtgtcttgttaggtttttgcgacctttgttgcacgagt 24493830  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||||||||||| | |||||| |||||||||||||||| | |||||||||||||||||    
T  24493829 tgttgagagttgaaccttggggtagtattaagacttaataatgatgttaattataatctgtg 24493768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 13025771 - 13025510
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||          | ||||||||||||    
T  13025771 tccttagatacttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagatttagaatgaaacttgtggga 13025672  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||| ||||||| |||| |||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||| | | |    
T  13025671 ttctgacctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacctagaaacagagtgacttgttaggtttttgcgacctttgttgcacgatt 13025572  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||||||||||| | |||||| ||||||||||||| || | |||||||||||| ||||    
T  13025571 tgttgagagttgaaccttggggtagtattaagacttaatgatgatgttaattataatatgtg 13025510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 21985807 - 21986068
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||          | |||||| ||| |    
T  21985807 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaacttttggaa 21985906  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||| | |||    
T  21985907 ttctgacctgaactcgccacggcaagcagaggccctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagt 21986006  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||||||||||| | |||||| ||| |||||| || || | ||||| |||||| ||||    
T  21986007 tgttgagagttgaaccttggggtagtattcagacttgatgatgatgttaactataatttgtg 21986068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 24529682 - 24529420
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           | |||||| |||     
T  24529682 tccttagatgcttttcagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaaggttgtagaatgaaacttttgga 24529583  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaag 188  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||||||||||||| | ||    
T  24529582 attctgatctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcactag 24529483  T
Q  189 ttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    | || |||||||||||| | |||||| ||| | ||||||| || | ||||| |||||||||||    
T  24529482 tagttgagagttgaaccttggggtagtattgaaacttaatgatgatgttaactataatctgtg 24529420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 9078406 - 9078152
Alignment:
Q  8 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtgggattctgac 97  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||          | |||| | | | ||||||||    
T  9078406 atgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagaatgagattgaacctggaaagatttagaatgaaaccttttgaattctgac 9078307  T
Q  98 ctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagttgtcgag 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||| || ||||||||  ||    
T  9078306 ctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttgttaag 9078207  T
Q  197 agttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
     |||||||| | |||||| ||| ||||||||| || | |||||||||||||||||    
T  9078206 ggttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtg 9078152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 25421993 - 25421732
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||| ||||||||          | ||||||  || |    
T  25421993 tccttagatgcttttgagtgcctgaacatgtctattaatgattaggaaagaacttaggatgagattggacctggaaagatttagaatgaaactttcggaa 25421894  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
     |||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||| ||||||| |||||||||||||||||||| | |||    
T  25421893 atctgacttgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaaaccgagtgccttgttaggattttgcgacctttgttgcacgagt 25421794  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||||||||||| | |||||| ||| ||||||||| || | |||||||||||||||||    
T  25421793 tgttgagagttgaaccttggggtagcattgagacttaatgatgatgttaattataatctgtg 25421732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 25431855 - 25431594
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||| ||||||||          | |||||| ||| |    
T  25431855 tccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagaatttaggatgagattggacctggaaagatttagaatgaaacttttggaa 25431756  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
     |||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||  ||||| ||||||| |||||||||||||||||| | | |||    
T  25431755 atctgacttgaactcgccacggcgagtagaggctctcacctcgcgagtgacccagaaatcgagtgccttgttaggattttgcgacctttgttacacgagt 25431656  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||||||||||| |  ||||| ||| ||||||||| || | |||||||||||||||||    
T  25431655 tgttgagagttgaaccttgaggtagcattgagacttaatgatgatgttaattataatctgtg 25431594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 245
Target Start/End: Complemental strand, 1096927 - 1096673
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgga----------attaaacttgtgggat 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||          | | ||||| ||| |     
T  1096927 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaaagattgcagaatgaacttttggaaa 1096828  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttag-attttgcgacctttgttgctcaagtt 190  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| |||| ||||||||| || ||| || ||||||    
T  1096827 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagaatgcctttttagaattttgcgatctctgtcgcacaagtt 1096728  T
Q  191 gtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataa 245  Q
    ||  | ||||| ||| | |||||| ||| ||||||||| |  | |||||||||||    
T  1096727 gttaaaagttggaccttggggtagtattgagacttaatgaggatgttaattataa 1096673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 11580905 - 11581058
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaattaaacttgtggg 89  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||           |||| |||||| || |    
T  11580905 tccttagaagcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaataaaactt-tgag 11581003  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgaccca 144  Q
    | |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11581004 aatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgaccca 11581058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 36154488 - 36154639
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaattaaacttgtggg 89  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||           |||| |||||| || |    
T  36154488 tccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagagtgagattgaacctggatagattttagaataaaactt-tgag 36154586  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacc 142  Q
    | |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  36154587 aatctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacc 36154639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 22119854 - 22119998
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtgggat 91  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||          |||| ||||||  | ||     
T  22119854 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaa 22119953  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  22119954 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 22119998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 19660498 - 19660572
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  19660498 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtggaatgagattaaacctggaa 19660572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 21871232 - 21871306
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||    
T  21871232 ccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaa 21871306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 21875512 - 21875586
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||    
T  21875512 ccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacctggaa 21875586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 21566005 - 21565930
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  21566005 tccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 21565930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 22959193 - 22959267
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgga 75  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||    
T  22959193 tccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctgga 22959267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 24766998 - 24767142
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtgggat 91  Q
    |||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||          | ||||||  | ||     
T  24766998 ccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatctggaaagacttagaatgaaactttggagaa 24767097  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||| |||||||| || |||||||||||||||||||||||||||    
T  24767098 tctgac-tgaactcgtcatggcgagcagaggctctcgcctcgcgag 24767142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 19669361 - 19669286
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||| ||  | |||||||||||| |||||    
T  19669361 tccttagatgtttttgagtgtctgaacatgtctaataatgattaggaaagattggggaatgagattgaacgtggaa 19669286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 205
Target Start/End: Complemental strand, 22144508 - 22144296
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----ttaa------acttgtgggattc 93  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||||| | |||  |||||||||||||||||    ||||      | || ||||| |     
T  22144508 ttagatgattttgagtgcctgaacatgtgtaacaatgattaggaaagattctagattgagattgaacctggaataatttaagaatggatttttgggagtt 22144409  T
Q  94 tgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt--agattttgcgacctttgttgctcaagttg 191  Q
      ||||||||||||||  ||||| |||||||||||||||||||||  |||||  ||||| || ||||||   |||||||||| |||||| || | |||||    
T  22144408 acacctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatg-cttgtttaggattttgcgatctttgtcgcacgagttg 22144310  T
Q  192 tcgagagttgaacc 205  Q
    | ||||||||||||    
T  22144309 ttgagagttgaacc 22144296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 21329156 - 21329231
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| ||||||||||||||||||||||| | |||||||| ||||| | |||  ||||||||||||||||||    
T  21329156 ccttagatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaat 21329231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 21498678 - 21498753
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    |||| |||| |||||||||||||||||||| ||||||| ||||||| ||| |||||  ||||||||||||||||||    
T  21498678 ccttggatgtttttgagtgcctgaacatgtataataattattaggagagattgtagattgagattgaacctggaat 21498753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 5888837 - 5888911
Alignment:
Q  3 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    |||||||| |||||||||||||||| ||| | || |||||||||||||| |||||  ||||||||||| ||||||    
T  5888837 cttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacatggaat 5888911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 41294112 - 41294176
Alignment:
Q  7 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    ||||| || ||||||||||||||| ||| || |||||||||| ||||||||||| ||||||||||    
T  41294112 gatgccttagagtgcctgaacatgcctagtattgattaggaatgaatgtaggatcagattgaacc 41294176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 21294947 - 21295006
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  21294947 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 21295006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 15441638 - 15441696
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||||||||||    
T  15441638 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 15441696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 20026526 - 20026592
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 70  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||  | |||  |||||||||||    
T  20026526 ttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaac 20026592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 25406847 - 25406789
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  25406847 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 25406789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 25535409 - 25535351
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  25535409 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 25535351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 5888940 - 5888981
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  5888940 acctgaactcgccatggcgagtagaggctctcgcctcgcgag 5888981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 17284499 - 17284430
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  17284499 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 17284430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 19660606 - 19660643
Alignment:
Q  100 gaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| |||||||||||||||||||||||||||    
T  19660606 gaactcgccatggcgagcagaggctctcgcctcgcgag 19660643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 21501919 - 21501968
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 145  Q
    ||||||||||||||  ||||| ||||||||||||||||||||| ||||||    
T  21501919 acctgaactcgccatagcgagtagaggctctcgcctcgcgagttacccag 21501968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 21565900 - 21565863
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcg 133  Q
    |||||||||||||| |||||||||||||||||||||||    
T  21565900 acctgaactcgccatggcgagcagaggctctcgcctcg 21565863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 22588516 - 22588459
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 70  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| |||||||||    
T  22588516 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaac 22588459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 22959298 - 22959339
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  22959298 acctgaactcgccatggcgagtagaggctctcgcctcgcgag 22959339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 23336973 - 23337030
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||||||  ||||||||||    
T  23336973 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 23337030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 138
Target Start/End: Original strand, 20026706 - 20026746
Alignment:
Q  98 ctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  20026706 ctgaactcgccacagcgagtagaggctctcgcctcgcgagt 20026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Original strand, 19472493 - 19472528
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  19472493 actcgccacggcgagcagatgctctcgcctcgcgag 19472528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 19992305 - 19992258
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 60  Q
    |||||||||||||||||| ||| || |||||||||| |||||||||||    
T  19992305 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtaggat 19992258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 20296180 - 20296145
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  20296180 actcgccacggcgagcagatgctctcgcctcgcgag 20296145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 21340525 - 21340576
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  21340525 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 21340576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 21741204 - 21741279
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||  |||||||||||||||| ||| | || |||| ||||||||| | |||  ||||||||||||||||||    
T  21741204 ccttagatatttttgagtgcctgaacttgtatgatgatgaataggaaagattatagattgagattgaacctggaat 21741279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 22334501 - 22334548
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 60  Q
    |||||||||||||||||| ||| || |||||||||| |||||||||||    
T  22334501 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtaggat 22334548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 23201731 - 23201680
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||| |||| |||| |||||||| |||||||||| ||||||||||||||||    
T  23201731 tgggaatctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 23201680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 23535347 - 23535398
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||| |||||| || |||||||| |||||||||| ||||||||||||||||    
T  23535347 tgggaatctgacttgtactcgccatggcgagcagatgctctcgcctcgcgag 23535398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 24532806 - 24532857
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  24532806 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 24532857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 24554955 - 24554896
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||| ||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  24554955 tttgagtgcctgaatatacctagtaatgattaggaatgaatgtaggacaagattgaacct 24554896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 26665889 - 26665940
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  26665889 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 26665940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 26937486 - 26937537
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  26937486 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 26937537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 137
Target Start/End: Complemental strand, 31342453 - 31342414
Alignment:
Q  98 ctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  31342453 ctgaactcgccatggcgagcagatgctctcgcctcgcgag 31342414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 37286464 - 37286523
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| || |||||||||  ||||||||||| |||||||||||    
T  37286464 tttgagtgcctgaacatacctagtattgattaggattgaatgtaggatcagattgaacct 37286523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 37293167 - 37293226
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| || |||||||||  ||||||||||| |||||||||||    
T  37293167 tttgagtgcctgaacatacctagtattgattaggattgaatgtaggatcagattgaacct 37293226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 14359504 - 14359562
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||||||   ||||||||||    
T  14359504 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacatgattgaacct 14359562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 22133420 - 22133362
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| || |||||||||| ||||||| ||| ||||||||||    
T  22133420 tttgagtgcctgaacatacctagtattgattaggaatgaatgtatgatcagattgaacc 22133362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 22140112 - 22140054
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| || |||||||||| ||||||| ||| ||||||||||    
T  22140112 tttgagtgcctgaacatacctagtattgattaggaatgaatgtatgatcagattgaacc 22140054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 25744074 - 25744036
Alignment:
Q  99 tgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  25744074 tgaactcgccatggcgagtagaggctctcgcctcgcgag 25744036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 26732421 - 26732463
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  26732421 ttagatgattttgagtgcctgaacatgtataagaatgattagg 26732463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 26740234 - 26740276
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  26740234 ttagatgattttgagtgcctgaacatgtataagaatgattagg 26740276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 27517184 - 27517126
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 60  Q
    |||| ||||| ||||||| |||||||||| ||| || |||||||||| |||||||||||    
T  27517184 ccttggatgcctttgagtacctgaacatgcctagtattgattaggaatgaatgtaggat 27517126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 27523821 - 27523763
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 60  Q
    |||| ||||| ||||||| |||||||||| ||| || |||||||||| |||||||||||    
T  27523821 ccttggatgcctttgagtacctgaacatgcctagtattgattaggaatgaatgtaggat 27523763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 15236453 - 15236522
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||  ||||||||||| ||||||||||    
T  15236453 ccttggatgccttagagtgcctgaacatacctagtattgattaggattgaatgtaggatcagattgaacc 15236522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 20232896 - 20232847
Alignment:
Q  88 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  20232896 ggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 20232847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 21741308 - 21741345
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcg 133  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  21741308 acctgaactcgccatggcgagtagaggctctcgcctcg 21741345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 22177807 - 22177848
Alignment:
Q  5 tagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    |||||| ||||||||||||||| |||| ||||||||||||||    
T  22177807 tagatgattttgagtgcctgaatatgtataataatgattagg 22177848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 25574056 - 25574097
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattag 45  Q
    ||||||| |||||||||||||||||||| ||| |||||||||    
T  25574056 ttagatggttttgagtgcctgaacatgtataagaatgattag 25574097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 25575249 - 25575290
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattag 45  Q
    ||||||| |||||||||||||||||||| ||| |||||||||    
T  25575249 ttagatggttttgagtgcctgaacatgtataagaatgattag 25575290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 25576442 - 25576483
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattag 45  Q
    ||||||| |||||||||||||||||||| ||| |||||||||    
T  25576442 ttagatggttttgagtgcctgaacatgtataagaatgattag 25576483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 26011697 - 26011770
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||| || |||||| || ||||||| |||||||||||| |||||| | ||   ||||||||||||||||||    
T  26011697 ttagatgattatgagtgtctaaacatgtgtaataatgattaagaaagattctaaattgagattgaacctggaat 26011770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 29471032 - 29471101
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| |  |||||||||| ||||||||||| ||||||||||    
T  29471032 ccttggatgccttagagtgcctgaacatacctagttttgattaggaatgaatgtaggatcagattgaacc 29471101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 29477627 - 29477696
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| |  |||||||||| ||||||||||| ||||||||||    
T  29477627 ccttggatgccttagagtgcctgaacatacctagttttgattaggaatgaatgtaggatcagattgaacc 29477696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 123074 - 123114
Alignment:
Q  97 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||| |||||||| |||||||||| ||||||||||||||||    
T  123074 cctgtactcgccatggcgagcagatgctctcgcctcgcgag 123114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 21871321 - 21871377
Alignment:
Q  81 acttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||| || |||||||||||| |||||||| |||||| |||||||| || ||||||||    
T  21871321 acttttgtgattctgacctgtactcgccatggcgagtagaggctcccggctcgcgag 21871377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 21875601 - 21875657
Alignment:
Q  81 acttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||| || |||||||||||| |||||||| |||||| |||||||| || ||||||||    
T  21875601 acttttgtgattctgacctgtactcgccatggcgagtagaggctcccggctcgcgag 21875657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 14052974 - 14053223
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14052974 ccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacttggaattaaacttgtgggattctgacctga 14053073  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  14053074 actcaccatggcgagcagaggctctcgccttgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgagttgtcgagagttg 14053173  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  14053174 aacccttgggtaggattaagacttaacaatgaggttaattataatctgtg 14053223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 3097092 - 3096843
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3097092 ccttagatgttttcgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatgaaacttgtgggattctgacctga 3096993  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  3096992 actcgccaaggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgagttgtcgagagttg 3096893  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||| ||||||||||| || ||||||| || |||||||||||||| ||||    
T  3096892 aacctttgggtaggataaatacttaatgatgaggttaattataatatgtg 3096843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 12903205 - 12902957
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12903205 ccttagatgcttt-gagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatgaaacttgtgggattctgacctga 12903107  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | || ||| ||||||||    
T  12903106 actcgccacggcgagtagaggctcccgcctcgcgagtgacccagaaacagagtgccttgttagattttgcgacctttgttgcacgagctgttgagagttg 12903007  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||| |||||||||||||||||||||| |  |||||||||||||||||||    
T  12903006 aacctttgggtaggattaagacttaatgaagaggttaattataatctgtg 12902957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 7089326 - 7089077
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  7089326 ccttagatgcctatgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatgaaacttatgggattctgacctga 7089227  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||   |||||||||||||||    
T  7089226 actcgccatggcgagcagaggctctcgcctcgcgagtgacccggaaacagagtgtcttgttagattttgcgacctttgttgcaagagttgtcgagagttg 7089127  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||| ||| |||| ||||||||||||| |  |||||||||||||||||||    
T  7089126 aacctttgagtagcattaagacttaatgaagaggttaattataatctgtg 7089077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 44053290 - 44053029
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||           | |||||||||||    
T  44053290 tccttagatgcttttgagtgtctgaacatgtctaataatgattgggaaagaatgtaggatgagattgaacctgtaaagattataggatgaaacttgtggg 44053191  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||    
T  44053190 attctgacctgaactcgccacggcgagcagagactctcgcctcgcgagtgacccagaaacagagtgccttgttagattttgcgacctttgttgcacgagt 44053091  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||||||||||||| | || ||| ||||||||||||| || | |||||||||||||||||    
T  44053090 tgtcgagagttgaaccttgggatagcattaagacttaatgatgatgttaattataatctgtg 44053029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 2 - 228
Target Start/End: Original strand, 17047745 - 17047970
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||  |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  17047745 ccttagatgtctttgagtgcctgaacatgactaataatgattaggaaaaaatgtaggatgagattgaac-tggaatgaaacttgtgggattctgacctga 17047843  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||||||||| | |||||| ||||||||    
T  17047844 actcgccatggcgagcagaggctctcgcctcgcgagtgacccggaaacagagtgccttgtgagactttgcgacctttgttgcacgagttgttgagagttg 17047943  T
Q  202 aacccttgggtaggattaagacttaat 228  Q
    |||| |||||||| |||||||||||||    
T  17047944 aacctttgggtagtattaagacttaat 17047970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 22636895 - 22636634
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||           | |||||||||||    
T  22636895 tccttagatgcttttgagtgtctgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaaaattgtagaatgaaacttgtggg 22636796  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    |||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||| | |||    
T  22636795 attctgacttgacctcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagtgtcttgttaggttttgcgacctttgttgcacgagt 22636696  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||| ||||||| | |||||| ||||||||||||  |  | |||||||||||||||||    
T  22636695 tgttgagaattgaaccttggggtagtattaagacttaacgaggatgttaattataatctgtg 22636634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 16377182 - 16377450
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatta----------aacttgtggga 90  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |          ||||| |||||    
T  16377182 tccttagatgcttttgagcgtctgaacatgtctaataatgattaggaaataatgtaggatgagattgaacctggaatgatcgtagaatgaacttttggga 16377281  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| |||||||| ||||||||||| | |||    
T  16377282 atctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacatagtgccttgttaggattttgctacctttgttgcacgagt 16377381  T
Q  190 tgt-cgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtggtgctg 257  Q
    | |  |||||||||||| | |||||| ||| ||||||||| || | |||||||||||||||||| ||||    
T  16377382 tttatgagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtggagctg 16377450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 14039110 - 14038848
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||           | |||||| |||     
T  14039110 tccttagatgcttttgagtgcctgaacatgtctaataatgatttggaaagaatgtagaatgagattgaacctagaaagattttagaatgaaacttttgga 14039011  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaag 188  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||| || ||||    
T  14039010 aatctgaccagaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaag 14038911  T
Q  189 ttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||   ||||||||||| | |||||| ||| ||||||||| || |  ||||||||||||||||    
T  14038910 ttgctaagagttgaaccttggggtagtattgagacttaatgatgatattaattataatctgtg 14038848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 7799158 - 7798967
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||           | |||||||| |     
T  7799158 tccttagatgcttttgagtgcctgaacatgactaataatgattaggacataatgtaggatgagattgaacctggaaagtttgtagaatgaaacttgtagt 7799059  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgtt 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  7799058 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgtcttgttaggttttgcgacctttgtt 7798967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 4 - 251
Target Start/End: Complemental strand, 15091355 - 15091096
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtgggatt 92  Q
    ||||||||||||||||  |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||           | |||||| ||| | |    
T  15091355 ttagatgcttttgagtttctgaacatgtctaatattgattaggaaagaatgtagaatgagattgaacctggaaggattttagaatgaaacttttggaaat 15091256  T
Q  93 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagttg 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || ||| || ||||||     
T  15091255 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttt 15091156  T
Q  192 tcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
       ||||||||||| | |||||| ||| ||||||||| |  | |||||||||||||||||    
T  15091155 ctaagagttgaaccttggggtagtattgagacttaatgaagatgttaattataatctgtg 15091096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 79 - 251
Target Start/End: Complemental strand, 7894073 - 7893900
Alignment:
Q  79 aaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctt 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| | ||||||||||||    
T  7894073 aaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagagtcttgttaggtttttgcgacctt 7893974  T
Q  178 tgttgctcaagttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||||||   ||||| ||||||||||||| | |||||  ||||||||||||  || | |||||||||||||||||    
T  7893973 tgttgcatgagttgccgagagttgaaccttggggtaatattaagacttaacgatgatgttaattataatctgtg 7893900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 96 - 248
Target Start/End: Original strand, 23374125 - 23374277
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcga 195  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | |||||| ||    
T  23374125 acctgaactcgccacggcgagcagaggctctcgcctcgcgggtgacccagaaacagagtgacttgttagattttgcaacctttgttgcacgagttgttga 23374224  T
Q  196 gagttgaacccttgggtaggattaagacttaataataaggttaattataatct 248  Q
    |  || |||| |||||||| ||||||||||||| |  ||||||| ||||||||    
T  23374225 ggattaaacctttgggtagcattaagacttaatgaagaggttaactataatct 23374277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 44928583 - 44928798
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaattaaacttgtggg 89  Q
    |||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||           |||| |||||| ||||    
T  44928583 tccttatatgtttttgagtgcctgaacatatctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactt-tggg 44928681  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt--agattttgcgacctttgttgctcaa 187  Q
    | ||||||| |||||||||| |||||||||||||||||||||||||||||||||||  ||||| || ||||||   |||||||||| |||||| || | |    
T  44928682 aatctgaccagaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatg-cttgtttaggattttgcgatctttgtcgcacga 44928780  T
Q  188 gttgtcgagagttgaacc 205  Q
    || || ||||||||||||    
T  44928781 gtcgttgagagttgaacc 44928798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 125 - 249
Target Start/End: Original strand, 16239764 - 16239889
Alignment:
Q  125 ctcgcctcgcgagtgacccagaaacagagtgacttgttagatttt-gcgacctttgttgctcaagttgtcgagagttgaacccttgggtaggattaagac 223  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| | |||||| |||||||||||  | |||||| ||||||||    
T  16239764 ctcgcctcgcgagtgacccagaaacagagtgacttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaactttggggtagtattaagac 16239863  T
Q  224 ttaataataaggttaattataatctg 249  Q
    ||||| || | |||||||||||||||    
T  16239864 ttaatgatgatgttaattataatctg 16239889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 16597105 - 16597031
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16597105 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa 16597031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 44102670 - 44102520
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaattaaacttgtggg 89  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| | ||||||||||||||||||||||||||           |||| |||||| || |    
T  44102670 tccttagatgcttttgagtgcctgagcatgtttaataatgattatg-aagaatgtaggatgagattgaacctggatagattttagaataaaactt-tgag 44102573  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacc 142  Q
    | |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44102572 aatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacc 44102520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 6190894 - 6190819
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  6190894 tccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaa 6190819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 20156950 - 20157025
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20156950 tccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 20157025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 15552273 - 15552199
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15552273 ccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaa 15552199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 16239652 - 16239728
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaag-aatgtaggatgagattgaacctggaa 76  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  16239652 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaatgtagaatgagattgaacctggaa 16239728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 24029201 - 24029057
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtgggat 91  Q
    |||||||||  ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||          |||| ||||||  | ||     
T  24029201 ccttagatgtctttgagtgcctgaacatgtctaatattgattatgaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaa 24029102  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  24029101 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 24029057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 22633876 - 22633948
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22633876 ttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 22633948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 6190782 - 6190688
Alignment:
Q  131 tcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttgaacccttgggtaggattaagactt 225  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||| | || |||||||||||||||| | | |||| ||||||||||    
T  6190782 tcgcgagtgacccaaaaatagagtgacttgttagattttgcgacctttgttgcacgagctgtcgagagttgaaccttggcgtagcattaagactt 6190688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 13812470 - 13812614
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtgggat 91  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||          | ||||||  | ||     
T  13812470 ccttagatgcctttgagtgtctgaacatgtctaatattgattaggaaataatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaa 13812569  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||| | ||||||||| |||||||||||||||||||||||||||    
T  13812570 tctgac-taaactcgccatggcgagcagaggctctcgcctcgcgag 13812614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 21814963 - 21815109
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg---aatta------aacttgtgggat 91  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||| |||| | |||||||||   |||||      ||||| | |||     
T  21814963 tccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctggattaattaagaatgaactttttggaa 21815062  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
     ||||| ||||||||||| |||||| |||||||||||||||||||||    
T  21815063 gctgacttgaactcgccatggcgagtagaggctctcgcctcgcgagt 21815109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 21815292 - 21815438
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg---aatta------aacttgtgggat 91  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||| ||| ||| |||| | |||||||||   |||||      ||||| | |||     
T  21815292 tccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaataatttagaatgataatgaacctggattaattaagaatgaactttttggaa 21815391  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
     ||||||||||||||||| |||||| |||||||||||||||||||||    
T  21815392 gctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 21815438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 21818385 - 21818531
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg---aatta------aacttgtgggat 91  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||| |||| | |||||||||   |||||      ||||| | |||     
T  21818385 tccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctggattaattaagaatgaactttttggaa 21818484  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
     ||||| ||||||||||| |||||| |||||||||||||||||||||    
T  21818485 gctgacttgaactcgccatggcgagtagaggctctcgcctcgcgagt 21818531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 12774459 - 12774385
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgga 75  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||| || || |||||||||||||||||    
T  12774459 tccttagatgtttttgagtgcctgaacatgtctaataatgattagaaaagattggagaatgagattgaacctgga 12774385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 8846834 - 8846761
Alignment:
Q  3 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  8846834 cttagatgtttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 8846761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 39705949 - 39706024
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||  | ||||||||||||||||    
T  39705949 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagattaagattgaacctggaat 39706024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 17046765 - 17046718
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17046765 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 17046718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 43198249 - 43198324
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||| | |||  ||||||||||| ||||||    
T  43198249 ccttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagattttagattgagattgaacatggaat 43198324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 52242856 - 52242929
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||| ||| |||||||||||||||| |||||||||| |||||||| | ||| |||||||||||||||||||    
T  52242856 ttagatgatttcgagtgcctgaacatgtataataatgatcaggaaagattctagaatgagattgaacctggaat 52242929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 15099810 - 15099735
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| |||||||||||||||| ||| | || |||||||||||||| |||||  ||||||||||||||||||    
T  15099810 ccttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctggaat 15099735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 15464592 - 15464661
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||| | |||  ||||||||||||||    
T  15464592 ttagatgattttgagtgcctgaatatgtataataatgattaggaaagattttagattgagattgaacctg 15464661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 15868296 - 15868368
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||||||  | |||  |||||||||||||||    
T  15868296 ccttagatgattttgagtgcctgaatatgtataataatgattaggaaagtttttagattgagattgaacctgg 15868368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 17046724 - 17046684
Alignment:
Q  211 gtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17046724 gtaggattaagacttaataataaggttaattataatctgtg 17046684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 14685593 - 14685534
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||| |||||||||||    
T  14685593 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggataagattgaacct 14685534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 15190777 - 15190702
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||  | |||  ||||||| ||||||||||    
T  15190777 ccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaaggttctagattgagatttaacctggaat 15190702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 12774355 - 12774313
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  12774355 acctgaactcgccatggcgagcagaggctctcgcctcgcgagt 12774313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 14679389 - 14679325
Alignment:
Q  8 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||| |||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  14679389 atgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 14679325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 137
Target Start/End: Complemental strand, 3332240 - 3332201
Alignment:
Q  98 ctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  3332240 ctgaactcgccatggcgagcagaggctctcgcctcgcgag 3332201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 23838855 - 23838796
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  23838855 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 23838796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 13436 - 13506
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    ||||||| ||||||||||||||||| || |||||||||||||| |||  | |||  |||||||||||||||    
T  13436 ttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgg 13506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 386038 - 386096
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  386038 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 386096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 7900855 - 7900913
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  7900855 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 7900913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 15321778 - 15321836
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  15321778 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 15321836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 22633980 - 22634018
Alignment:
Q  99 tgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  22633980 tgaactcgccatggcgagcagaggctctcgcctcgcgag 22634018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 40471907 - 40471837
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| |||||||||||    
T  40471907 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacct 40471837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 51493502 - 51493560
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  51493502 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 51493560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 13844999 - 13844950
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 51  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||| |||||    
T  13844999 ccttagatgtttttgagtgtctgaacatgtctaattatgattagaaaaga 13844950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 15099706 - 15099665
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  15099706 acctgaactcgccatggcgagtagaggctctcgcctcgcgag 15099665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 15552166 - 15552129
Alignment:
Q  100 gaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||||||||||||||| |||||||||||    
T  15552166 gaactcgccacggcgagcagaggctcgcgcctcgcgag 15552129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 40478580 - 40478511
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  40478580 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 40478511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 205
Target Start/End: Original strand, 15464694 - 15464805
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt--agattttgcgacctttgttgctcaagttgtc 193  Q
    |||||||||| |||  ||||| |||||||||||||||||||||  |||||  ||||| |||||||||   |||||||| | |||||| || ||||||||     
T  15464694 acctgaactcaccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgacttgtttaggattttgcaatctttgtcgcacaagttgtt 15464793  T
Q  194 gagagttgaacc 205  Q
      ||||||||||    
T  15464794 atgagttgaacc 15464805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Original strand, 4561107 - 4561142
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4561107 actcgccacggcgagcagatgctctcgcctcgcgag 4561142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Original strand, 5756711 - 5756746
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  5756711 actcgccacggcgagcagatgctctcgcctcgcgag 5756746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 19757359 - 19757410
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  19757359 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 19757410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 19782447 - 19782396
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  19782447 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 19782396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 137
Target Start/End: Original strand, 20157056 - 20157095
Alignment:
Q  98 ctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  20157056 ctgaactcgccatggcgtgcagaggctctcgcctcgcgag 20157095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 26284595 - 26284650
Alignment:
Q  16 gagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    ||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  26284595 gagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 26284650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 32851911 - 32851868
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattag 45  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||    
T  32851911 ccttagatgattttgagtgcctgaatatgtataataatgattag 32851868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 33742710 - 33742675
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  33742710 actcgccacggcgagcagatgctctcgcctcgcgag 33742675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 45938495 - 45938444
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  45938495 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 45938444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 6873060 - 6873118
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| || |||||| ||| ||||||||||| ||||||||||    
T  6873060 tttgagtgcctgaacatacctagtattgattatgaatgaatgtaggatcagattgaacc 6873118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 12522505 - 12522447
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||||||  |||| ||||||    
T  12522505 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagatggaacct 12522447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 32306582 - 32306624
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||    
T  32306582 ttagatggttttgagtgcctaaacatgtataataatgattagg 32306624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 35171045 - 35170991
Alignment:
Q  18 gtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  35171045 gtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 35170991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 41385430 - 41385488
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||||||||||||  ||| ||||||||||||  ||||||||||  |||||||||||    
T  41385430 ttgagtgcctgaacatacctagtaatgattaggagtgaatgtaggacaagattgaacct 41385488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 52242958 - 52243000
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    ||||||||||||||  ||||| |||||||||||||||||||||    
T  52242958 acctgaactcgccatagcgagtagaggctctcgcctcgcgagt 52243000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 8846730 - 8846689
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||| ||||||||| |||||| ||||||||||||||||||||    
T  8846730 accttaactcgccatggcgagtagaggctctcgcctcgcgag 8846689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 16956334 - 16956379
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 58  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||||    
T  16956334 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtagg 16956379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 12287794 - 12287866
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    ||||||||| || | |||| |||||||||| |||||||||||||| |||  | |||  |||||||||||||||    
T  12287794 ccttagatgtttctaagtgtctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 12287866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 26243423 - 26243471
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgc 134  Q
    |||||||||| | || |||||||| |||||||||| |||||||||||||    
T  26243423 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgc 26243471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 39706052 - 39706092
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcga 136  Q
    |||||||||||||| |||||| |||||| ||||||||||||    
T  39706052 acctgaactcgccatggcgagtagaggccctcgcctcgcga 39706092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 53081760 - 53081832
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||| || ||||||||| ||||||| |||||||||||| | |||  | |||  |||||||||||||||||    
T  53081760 ttagatgattctgagtgcctaaacatgtataataatgattaagcaagtttttagattgagattgaacctggaa 53081832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 32513 - 32264
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  32513 ccttagatgcttttgagtgcctgaacatgtctaataatgactaggaaagaatgtgggatgagattgaacctggaattaaacttgtgggattctgacttga 32414  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||| |||||||||||||||    
T  32413 acttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagttacttttttgattttgcgacctttgttgctctagttgtcgagagttg 32314  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  32313 aacccttgggtaggattaagacttaacaatgaggttaattataatctgtg 32264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 40443837 - 40443589
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  40443837 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacctggaattaa-cttgtgggattctgacctga 40443739  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | |||||||||||| ||    
T  40443738 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttattggattttgcgacctttgttgcacgagttgtcgagagatg 40443639  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  40443638 aacccttgggtaggattaagacttaacaatgaggttaattataatctgtg 40443589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 27847505 - 27847754
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||    
T  27847505 ccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatttaggatgagattgaacctggaattaaacttatgggattttgacctga 27847604  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  27847605 actcgccacggcaagcagaggctctcgcctcgcgagtgacccaaaaacagagtgacttgttagattttgcgacctttgttgcacgagttgtcgagagttg 27847704  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||||||||||||||||||||||||||| || |||| |||||||||||    
T  27847705 aacccttgggtaggattaagacttaataatgagattaactataatctgtg 27847754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 16385919 - 16386168
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16385919 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctaacctga 16386018  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||    
T  16386019 actcgccacggcgagcagtggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcatgagttgtccagagttg 16386118  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||| |||||||  ||||||||||||| |  ||||||| |||||||||||    
T  16386119 aacctttgggtaacattaagacttaatgaagaggttaactataatctgtg 16386168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 9509650 - 9509389
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           | |||||||||||    
T  9509650 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggg 9509551  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||    
T  9509550 attctgacctgaactcgccacggcgaggagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagattttgcgacctttgttgcaagagt 9509451  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||||||||||||| | || ||| ||||||||||||| |  | |||||||||||||||||    
T  9509450 tgtcgagagttgaaccttgggatagcattaagacttaatgaggatgttaattataatctgtg 9509389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 26212445 - 26212196
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  26212445 ccttagatgcctttgagtgcctgaacatgtctaatatttattaggtaagaatgtaggatgagattgaacctggaatgaaacttgtgaggttctgacctga 26212346  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccag-aaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagtt 200  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||| | |||||| |||  ||    
T  26212345 actcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaaacagagtgatttgttag-ttttgcgacctttgttgcacgagttgttgaggatt 26212247  T
Q  201 gaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
     |||| |||||||| ||||||||||||| |  |||||||||||||||||||    
T  26212246 aaacctttgggtagcattaagacttaatgaagaggttaattataatctgtg 26212196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 12699293 - 12699032
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||           | ||||| |||||    
T  12699293 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaaagattgttgaatgaaactcgtggg 12699194  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||| |||||||||||||||||| | |||    
T  12699193 attctgacctgaactcgccacggcgagcagaggctctcacctcgtgagtgacccagaaacaaagtgacttgttaggttttgcgacctttgttgcacgagt 12699094  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||| ||||||||| | |||||| ||||||| ||||| |  | |||||||||||||||||    
T  12699093 tgtcgatagttgaaccttggggtagtattaagagttaatgaggatgttaattataatctgtg 12699032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 38227941 - 38227680
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||          | |||||| | |||    
T  38227941 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaactttttgga 38227842  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| | |||||||||||||||||| | |||    
T  38227841 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccataaacagagtgccttgttaggtttttgcgacctttgttgcacgagt 38227742  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||  ||||||||||| | |||||| ||||||||||||| || | |||||||||||| ||||    
T  38227741 tgttaagagttgaaccttggggtagtattaagacttaatgatgatgttaattataatatgtg 38227680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 3 - 245
Target Start/End: Original strand, 3564026 - 3564279
Alignment:
Q  3 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatta----------aacttgtgggatt 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |          ||||| ||| | |    
T  3564026 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaacttttggaaat 3564125  T
Q  93 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagttg 191  Q
    |||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | |||||    
T  3564126 ctgacctgaactcgccacagcgagcaaatgctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttg 3564225  T
Q  192 tcgagagttgaacccttgggtaggattaagacttaataataaggttaattataa 245  Q
    |  |||||| |||| | |||||| ||| ||||||||| || | |||||||||||    
T  3564226 ttaagagtttaaccttggggtagtattgagacttaatgatgatgttaattataa 3564279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 103 - 251
Target Start/End: Complemental strand, 10589386 - 10589238
Alignment:
Q  103 ctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttga 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| |||||||     
T  10589386 ctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgaccttttttgcacgagttgtctagagttgg 10589287  T
Q  203 acccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||||||||||||||||||||| || |||||||||||||||||||    
T  10589286 acctttgggtaggattaagacttaatgatgaggttaattataatctgtg 10589238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 250
Target Start/End: Original strand, 15143698 - 15143957
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----tta-----aacttgtgggat 91  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||     |||     ||||| || |||    
T  15143698 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagattttagaatgagattgaacctggaaagattttagaatgaacttttgtgat 15143797  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 190  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| | ||||    
T  15143798 tctgacctgtactcgccatggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggattttgcgacctttgttgcacgagtt 15143897  T
Q  191 gtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgt 250  Q
    |   |||||||||||   |||||| | ||||||||||| || | ||| | ||||||||||    
T  15143898 gctaagagttgaacctcggggtagtactaagacttaatgatgatgtttaatataatctgt 15143957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 44116965 - 44116816
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc----------tggaattaaacttgtggga 90  Q
    |||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||          | |||| |||||| |||||    
T  44116965 tccttatatgcctttgagtccctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacccggaaagatttagaatgaaactt-tggga 44116867  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgac 141  Q
     |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  44116866 atctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgac 44116816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 17061620 - 17061771
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaattaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||           |||| |||||| || |    
T  17061620 tccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaataaaactt-tgag 17061718  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacc 142  Q
    | |||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  17061719 aatctgacctgaactcgcgatggcgagtagaggctctcgcctcgcgagtgacc 17061771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 12756377 - 12756523
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgga---------attaaacttgtgggat 91  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||         | | ||||| | |||     
T  12756377 tccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattatttaagaatgaactttttggaa 12756476  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
     ||||||||||||| ||| |||||| |||||||||||||||||||||    
T  12756477 gctgacctgaactcaccatggcgagtagaggctctcgcctcgcgagt 12756523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 15754548 - 15754622
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  15754548 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaa 15754622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 28504962 - 28505106
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtgggat 91  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          |||| ||| ||  | ||     
T  28504962 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 28505061  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||    
T  28505062 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 28505106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 2831967 - 2832110
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----tta-----aacttgtgggatt 92  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    |||     |||||  | || |    
T  2831967 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctagaaagacttagaatgaactttggagaat 2832066  T
Q  93 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||| |||||||| ||| |||||||||||||||||||||||||||    
T  2832067 ctga-ctgaactcaccatggcgagcagaggctctcgcctcgcgag 2832110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 9751211 - 9751285
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  9751211 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgaggttgaacctggaa 9751285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 39267307 - 39267447
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtgggat 91  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||          | ||||||  | ||     
T  39267307 ccttatatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaa 39267406  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcg 133  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  39267407 tctgac-tgaactcgccatggcgagcagaggctctcgcctcg 39267447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 18302638 - 18302564
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||||  |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  18302638 ccttagatgcccttgagtgcctgaacatgtctaatatttattaggaaagaatgtaggatgagattgaacctggaa 18302564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 44014633 - 44014560
Alignment:
Q  3 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  44014633 cttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 44014560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 810789 - 810864
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| || || || |||||||||||||||    
T  810789 tccttagatgtttttgagtgcctgaacatatctaataatgattaggaaagattggagaataagattgaacctggaa 810864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 34201243 - 34201172
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    ||||||||||||||||||| ||||||||||||||||||||| | |||||||| ||| |||||||||||||||    
T  34201243 ccttagatgcttttgagtgtctgaacatgtctaataatgatcaagaaagaatttagaatgagattgaacctg 34201172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 47832268 - 47832193
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||  | |||||||| |||||||    
T  47832268 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagattgaatctggaat 47832193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 11995719 - 11995768
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 51  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11995719 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 11995768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 12255454 - 12255527
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||| |||||||||| ||||||||| ||||||||||||||||||| | |||  ||||||||||||||||||    
T  12255454 ttagatgattttgagtgcttgaacatgtataataatgattaggaaagattctagattgagattgaacctggaat 12255527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 16324456 - 16324391
Alignment:
Q  12 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    |||||||||| ||||||||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  16324456 ttttgagtgcttgaacatgtctaataatgattaggaaagattggagtttgagattgaacctggaat 16324391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 68207 - 68131
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    |||||| ||| ||| ||||||||||| |||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  68207 tccttaaatgttttcgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacctggaat 68131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 22073376 - 22073301
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||| | |||||||||||||||||||| ||||||||||||| ||||| | ||| |||||||||||||| ||||    
T  22073376 ccttagaggtttttgagtgcctgaacatgtgtaataatgattagaaaagattctagaatgagattgaacctagaat 22073301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 18006102 - 18006052
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 51  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  18006102 tccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaaga 18006052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 2279781 - 2279850
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||| | |||  ||||||||||||||    
T  2279781 ttagatgattttgagtgcctgaacatgcataataatgattaggaaagattttagattgagattgaacctg 2279850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 16219377 - 16219452
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| ||||||||| || ||| ||| ||||||||||||||||||| | |||  ||||||||||||||||||    
T  16219377 ccttagatgtttttgagtgtctaaacttgtataataatgattaggaaagattttagattgagattgaacctggaat 16219452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 16056684 - 16056616
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttag 164  Q
    ||||||||||||||  ||||| ||||||||||||||||||||| ||||||  ||||| || ||||||||    
T  16056684 acctgaactcgccatagcgagtagaggctctcgcctcgcgagttacccagttacagaatgccttgttag 16056616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 9389356 - 9389431
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    |||| |||| ||||||||| ||| || ||| |||| |||||||||||||| |||||  ||||||||||||||||||    
T  9389356 ccttggatgtttttgagtgtctggacttgtataatgatgattaggaaagattgtagattgagattgaacctggaat 9389431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 14953619 - 14953560
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  14953619 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 14953560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 14959585 - 14959526
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  14959585 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 14959526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 137
Target Start/End: Complemental strand, 18302533 - 18302494
Alignment:
Q  98 ctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  18302533 ctgaactcgccatggcgagcagaggctctcgcctcgcgag 18302494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 21064823 - 21064898
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| || |||| ||||||||||||  |||||||||||||||| | | ||| |||||||||||| ||||||    
T  21064823 ccttagatgtttatgagggcctgaacatgtacaataatgattaggaaatattttagaatgagattgaacttggaat 21064898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 26420399 - 26420340
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  26420399 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 26420340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 44408043 - 44408102
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  44408043 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 44408102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 810894 - 810936
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  810894 acctgaactcgccatggcgagtagaggctctcgcctcgcgagt 810936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 11547953 - 11548010
Alignment:
Q  15 tgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  11547953 tgagtgcctgaacatacctagtaatgattaggaatgaatgtaggaaaagattgaacct 11548010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 11554549 - 11554606
Alignment:
Q  15 tgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  11554549 tgagtgcctgaacatacctagtaatgattaggaatgaatgtaggaaaagattgaacct 11554606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 14045281 - 14045212
Alignment:
Q  5 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    |||||| ||||||||||||||| |||| |||||||||||||| |||  | |||  |||||||||||||||    
T  14045281 tagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgg 14045212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 14355311 - 14355242
Alignment:
Q  5 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    |||||| ||||||||||||||| |||| |||||||||||||| |||  | |||  |||||||||||||||    
T  14355311 tagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgg 14355242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 16056778 - 16056713
Alignment:
Q  12 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||| || ||||||||||| ||||||||| ||||||||| | |||  ||||||||||||||||||    
T  16056778 ttttgtgtacctgaacatgtataataatgaataggaaagattttagattgagattgaacctggaat 16056713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 20702664 - 20702733
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  20702664 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 20702733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 22073272 - 22073223
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 145  Q
    |||||||||||||| |||||| |||||| |||||||||||||| ||||||    
T  22073272 acctgaactcgccatggcgagtagaggccctcgcctcgcgagttacccag 22073223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 32768107 - 32768038
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  32768107 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 32768038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 2529638 - 2529682
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||    
T  2529638 ccttagatgattttgagtgcctgaatatgtataataatgattagg 2529682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 137
Target Start/End: Original strand, 9389462 - 9389501
Alignment:
Q  98 ctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  9389462 ctgaactcgccatggcgagtagaggctctcgcctcgcgag 9389501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 137
Target Start/End: Original strand, 9751316 - 9751355
Alignment:
Q  98 ctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  9751316 ctgaactcgccatggtgagcagaggctctcgcctcgcgag 9751355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 11238655 - 11238702
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 60  Q
    |||||||||||||||||| ||| || |||||||||| |||||||||||    
T  11238655 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtaggat 11238702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 137
Target Start/End: Original strand, 11995796 - 11995835
Alignment:
Q  98 ctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  11995796 ctgaactcgccatggcaagcagaggctctcgcctcgcgag 11995835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 12692917 - 12692858
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| ||||||||||||| |||||| |||  |||||||||||    
T  12692917 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtcggacaagattgaacct 12692858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 12719001 - 12718966
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12719001 actcgccacggcgagcagatgctctcgcctcgcgag 12718966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 12723912 - 12723877
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12723912 actcgccacggcgagcagatgctctcgcctcgcgag 12723877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 12901852 - 12901793
Alignment:
Q  15 tgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    ||||||||||||||||| |||||||||||||| |||  | |||  |||||||||||||||    
T  12901852 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 12901793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 14148987 - 14148932
Alignment:
Q  17 agtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  14148987 agtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 14148932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 16438792 - 16438843
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  16438792 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 16438843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Original strand, 16906974 - 16907009
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16906974 actcgccacggcgagcagatgctctcgcctcgcgag 16907009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 17137820 - 17137871
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  17137820 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 17137871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 18279736 - 18279701
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  18279736 actcgccacggcgagcagatgctctcgcctcgcgag 18279701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 18283699 - 18283664
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  18283699 actcgccacggcgagcagatgctctcgcctcgcgag 18283664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 137
Target Start/End: Complemental strand, 34201138 - 34201099
Alignment:
Q  98 ctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  34201138 ctgaactcgccatggcgagcagaggctcttgcctcgcgag 34201099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 68099 - 68061
Alignment:
Q  99 tgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  68099 tgaactcgccatggcgagtagaggctctcgcctcgcgag 68061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 4318229 - 4318287
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| ||||||||||||| | ||||||||  ||||||||||    
T  4318229 tttgagtgcctgaacatacctagtaatgattaggaatggatgtaggacaagattgaacc 4318287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 9177252 - 9177318
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 70  Q
    ||||||| |||||||||||||||||||| ||| |||||||||| |||  | |||  |||||||||||    
T  9177252 ttagatgtttttgagtgcctgaacatgtataagaatgattaggtaagtttttagattgagattgaac 9177318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 11262749 - 11262691
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||| |||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  11262749 ttgaatgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 11262691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 11768526 - 11768568
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  11768526 ttagatgattttgagtgcctgaacatgtataagaatgattagg 11768568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 12255556 - 12255598
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    ||||||||||||||  ||||| |||||||||||||||||||||    
T  12255556 acctgaactcgccatagcgagtagaggctctcgcctcgcgagt 12255598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 25038895 - 25038953
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||||||||||||  |||  |||||||||||| ||||||||||  |||||||||||    
T  25038895 ttgagtgcctgaacatacctagaaatgattaggaatgaatgtaggacaagattgaacct 25038953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 70438 - 70507
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||  ||||||||||| ||||||||||    
T  70438 ccttggatgccttagagtgcctgaacatacctagtattgattaggattgaatgtaggatcagattgaacc 70507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 74546 - 74615
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||  ||||||||||| ||||||||||    
T  74546 ccttggatgccttagagtgcctgaacatacctagtattgattaggattgaatgtaggatcagattgaacc 74615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 1867650 - 1867719
Alignment:
Q  5 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    |||||| |||| |||||||||| |||| |||||||||||||| |||  | |||  |||||||||||||||    
T  1867650 tagatgttttttagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgg 1867719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 15008107 - 15008148
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattag 45  Q
    ||||||| || ||||||||||||||||| |||||||||||||    
T  15008107 ttagatgattctgagtgcctgaacatgtataataatgattag 15008148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 18531665 - 18531608
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    ||||||||||||||||  ||| ||||||||||| | ||||||||||  ||||||||||    
T  18531665 ttgagtgcctgaacatacctagtaatgattagggatgaatgtaggacaagattgaacc 18531608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 44014530 - 44014489
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||| || ||| ||||||||||||||||||||    
T  44014530 acctgaactcgccatggtgagtagaggctctcgcctcgcgag 44014489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 14655095 - 14655147
Alignment:
Q  8 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 60  Q
    |||| |||||||||||||||||  ||| || |||||||||| |||||||||||    
T  14655095 atgcctttgagtgcctgaacatacctagtattgattaggaatgaatgtaggat 14655147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 5 - 251
Target Start/End: Original strand, 15140 - 15386
Alignment:
Q  5 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctgaact 104  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  15140 tagatgcttttgagtgccttaatatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaataaaacttgtaggattctgacctgaact 15239  T
Q  105 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttgaac 204  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||      
T  15240 cgccacggagagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgagttgtcgagagttgact 15339  T
Q  205 ccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    | |||||||||||||||||||||||||||||||||||||||||||||    
T  15340 cgttgggtaggattaagacttaataataaggttaattataatctgtg 15386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 724 - 973
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  724 ccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtggaattctgacctga 823  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| | | |||||||||||||    
T  824 actcgccacggcgagcagaggctctcgcctcgcgagtaacccagaaacagagtgacttgttagattttgcaacctttgttgcacgatttgtcgagagttg 923  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||||||||||||||||| ||||| ||| ||||||| |||||||||||    
T  924 aacccttgggtaggattaagtcttaagaatgaggttaactataatctgtg 973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 206; Significance: 1e-112; HSPs: 107)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 20698108 - 20698357
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20698108 ccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatgaaacttgtgggattctgacctga 20698207  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||    
T  20698208 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgtggcacgagttgtcgagagttg 20698307  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||| |||| ||| ||||||||||||| || | |||||||||||||||||    
T  20698308 aacctttggatagaattaagacttaatgatgatgttaattataatctgtg 20698357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 17488318 - 17488056
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           | |||||||| ||    
T  17488318 tccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtagg 17488219  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa-cagagtgacttgttagattttgcgacctttgttgctcaag 188  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||| | ||    
T  17488218 attctgacctgaaatcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaaacagagtgccttgttagattttgcgacctttgttgcacgag 17488119  T
Q  189 ttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||||||||||||||||| | || ||| ||||||||||||| || | |||||||||||||||||    
T  17488118 ttgtcgagagttgaaccttgggatagcattaagacttaatgatgatgttaattataatctgtg 17488056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 13442725 - 13442474
Alignment:
Q  11 cttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtgggattctgacct 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||           | |||||||||||||||||||||    
T  13442725 cttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacct 13442626  T
Q  100 gaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagt 199  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||    
T  13442625 gaacttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagattttgcgacctttgttgcacgagttgtcgagagt 13442526  T
Q  200 tgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||| | || |   ||||||||||||| || | |||||||||||||||||    
T  13442525 tgaaccttgggatgacattaagacttaatgatgatgttaattataatctgtg 13442474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 4 - 250
Target Start/End: Original strand, 40213384 - 40213641
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatta----------aacttgtgggattc 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |          ||||| ||||| ||    
T  40213384 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaacttttgggaatc 40213483  T
Q  94 tgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagttgt 192  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | ||||||    
T  40213484 taacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgt 40213583  T
Q  193 cgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgt 250  Q
     ||||||| |||| | |||||| ||| ||||||||| || | ||||||||||||||||    
T  40213584 tgagagtttaaccttggggtagtattgagacttaatgatgatgttaattataatctgt 40213641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 26687348 - 26687087
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||           | |||||||||||    
T  26687348 tccttagatgcttttgagtgcctaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggg 26687249  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||| | | |    
T  26687248 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggttttacgacctttgttgcacgaat 26687149  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
     || |||||||||||  | |||||| |||  |||||||| |  | |||||||||||||||||    
T  26687148 cgttgagagttgaactttggggtagtattgggacttaatgaggatgttaattataatctgtg 26687087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 17499800 - 17499538
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           | |||||||| ||    
T  17499800 tccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgttgg 17499701  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa-cagagtgacttgttagattttgcgacctttgttgctcaag 188  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| | ||||||| ||||| ||||||| ||||||||||||||||||||||||||| | ||    
T  17499700 attctgacctgaattcgccacggtgagcagaggctctcgcctctctagtgacctagaaaacagagtgccttgttagattttgcgacctttgttgcacgag 17499601  T
Q  189 ttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||||||||||||||||| | || ||| ||||||||||||| || | |||||||||||| ||||    
T  17499600 ttgtcgagagttgaaccttgggatagcattaagacttaatgatgatgttaattataatttgtg 17499538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 18438995 - 18438734
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||          | |||||| ||| |    
T  18438995 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaaaatgagattgaacctggaaagatttagaatgaaacttttggaa 18438896  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||| | |||    
T  18438895 ttctgacctgaagttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagt 18438796  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| ||| |||||||| | |||||| ||| ||||||||| || | ||||| |||||||||||    
T  18438795 tgttgagtgttgaaccttggggtagtattgagacttaatgatgatgttaactataatctgtg 18438734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 2 - 228
Target Start/End: Complemental strand, 30030288 - 30030062
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaac-ttgtgggattctgacctg 100  Q
    |||||||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||  | ||| ||||||||||     
T  30030288 ccttagatgcctttgagtgtctgaacatgtctaataatgattacgaaagaatgtgggatgagattgaacctggaatgaaacagtttggaattctgacct- 30030190  T
Q  101 aactcgccacggcgagcagaggctctcgcctcgcgagtga-cccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagt 199  Q
    ||||||||| |||||||||||||||||||||||||||| | ||||| |||||| || ||||||||||||||||||||||||||| | |||||||||||||    
T  30030189 aactcgccatggcgagcagaggctctcgcctcgcgagtaatcccag-aacagaatgccttgttagattttgcgacctttgttgcacgagttgtcgagagt 30030091  T
Q  200 tgaacccttgggtaggattaagacttaat 228  Q
    |||||| ||||||||  ||||||||||||    
T  30030090 tgaacctttgggtagctttaagacttaat 30030062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 12399655 - 12399409
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| | ||||||||||||| ||||||||| | |||||||||||    
T  12399655 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatataggatgggtttgaacctggaatgaaacttgtgaggttctgacctga 12399556  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||||||||||||||| | ||||||||||||| ||||||||||||||||  ||||||||||||| |||| ||||||||||||| | |||||| | |  ||     
T  12399555 actcgccacggcgagtaaaggctctcgcctcacgagtgacccagaaac--agtgacttgttag-ttttccgacctttgttgcacgagttgttggggatta 12399459  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    | || |||||||| |||||||| |||| |  ||||||| |||||||||||    
T  12399458 agcctttgggtagcattaagacataatgaagaggttaactataatctgtg 12399409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 14573049 - 14572788
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||          | |||| | ||| |    
T  14573049 tccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagacttagaatgaaacctttggaa 14572950  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
     |||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||  ||||||| | |||||||||||||||||| | |||    
T  14572949 atctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtaccttgttaggtttttgcgacctttgttgcacgagt 14572850  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||||||||||| | |||||| ||||||||||||| || | |||||||||||| ||||    
T  14572849 tgttgagagttgaaccttggggtagtattaagacttaatgatgatgttaattataatttgtg 14572788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 11424423 - 11424684
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||          | |||||| | | |    
T  11424423 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaataatgtagaatgagattgaacctggaaagatttagaatgaaactttttgaa 11424522  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
     ||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||| ||||||| | |||||||||||||||||| | |||    
T  11424523 ctctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagcgacctagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagt 11424622  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||||||||||  | |||||| ||| |||||||||  | | ||||||| |||||||||    
T  11424623 tgttgagagttgaactttggggtagtattgagacttaatgttgatgttaattttaatctgtg 11424684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 14576493 - 14576754
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    ||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||| |||| |||||||||||||          | |||| | ||| |    
T  14576493 tccttagatgcctttgagtgcctgaacatgtctaattatgattagaaaagaatgtagaatgacattgaacctggaaagacttagaatgaaacctttggaa 14576592  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
     |||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||||||| | |||    
T  14576593 atctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacctagaaacaaagtgccttgttaggattttgcgacctttgttgcacgagt 14576692  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||||||||||| | |||||| ||||||| ||||| || | |||||||||||||||||    
T  14576693 tgttgagagttgaaccttggggtagtattaagatttaatgatgatgttaattataatctgtg 14576754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 14973315 - 14973057
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----tta-----aacttgtggga 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| | ||     |||     ||||| ||| |    
T  14973315 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattaaaccagaaaagattttagaaagaacttttggaa 14973216  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||  | ||| || |||||    
T  14973215 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagt 14973116  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatct 248  Q
    ||   ||||||||||| | |||||| ||| ||||||||| || | ||||||||||||||    
T  14973115 tgctaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatct 14973057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 25476045 - 25476306
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    |||||||||| |||||||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||           | |||||| |||     
T  25476045 tccttagatgtttttgagtacctgaacatgtctaataatgattatgaaagaatgtagaatgagatcgaacctggaaagattttagaatgaaacttttgga 25476144  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaag 188  Q
    || ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | ||    
T  25476145 at-ctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgag 25476243  T
Q  189 ttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||| |||||||||||| |  ||||| ||| ||||||||| |  | |||||||| ||||||||    
T  25476244 ttgttgagagttgaaccttgaggtagtattgagacttaatgaggatgttaattacaatctgtg 25476306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 23083021 - 23083282
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    |||||||||||||||||||||||| | |||||||||| ||||||||| | ||||||||||||||||| ||||||||          | |||||| | |||    
T  23083021 tccttagatgcttttgagtgcctggatatgtctaatagtgattaggacaaaatgtaggatgagattggacctggaaagatttagaatgaaactttttgga 23083120  T
Q  91 ttctgacc-tgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    |||||||| | ||||||||| |||||| ||||||||||||||||||| ||||||||||||| |||| |||||||| |||||||||||||||||| | |||    
T  23083121 ttctgacccttaactcgccatggcgagtagaggctctcgcctcgcgaatgacccagaaacatagtgtcttgttaggttttgcgacctttgttgcacgagt 23083220  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||  ||||||||||| |  ||||| ||||||||||| | || | |||||||| ||||||||    
T  23083221 tgttcagagttgaaccttgaggtagtattaagacttagtgatgatgttaattacaatctgtg 23083282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 17247946 - 17248100
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaattaaacttgtggg 89  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||           |||| |||||| ||||    
T  17247946 tccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactt-tggg 17248044  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 145  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17248045 aatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccag 17248100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 16809845 - 16809724
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||| |||||||||||||| |||||||    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  16809845 ccttaaatgcttttgagtgcttgaacat----aataatgattaggaaagaatgtaggatgagattgatcctggaatgaaacttgtgggattctgacctga 16809750  T
Q  102 actcgccacggcgagcagaggctctc 127  Q
    |||||||| |||||||||| ||||||    
T  16809749 actcgccatggcgagcagatgctctc 16809724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 74 - 200
Target Start/End: Complemental strand, 43841309 - 43841183
Alignment:
Q  74 gaattaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcga 173  Q
    |||| |||||||||| ||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  43841309 gaatgaaacttgtggaattctgacctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacccagaaacagagtgtcttgttaggttttgcga 43841210  T
Q  174 cctttgttgctcaagttgtcgagagtt 200  Q
    |||||||| | | |||||| |||||||    
T  43841209 cctttgttacacgagttgttgagagtt 43841183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 53070359 - 53070505
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg---aatta------aacttgtgggat 91  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||   |||||      ||||| | |||     
T  53070359 tccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaattaagaatgaactttttggaa 53070458  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
     ||||||||||||||||| |||||| |||||||||||||||||||||    
T  53070459 gctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 53070505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 12340212 - 12340138
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12340212 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 12340138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 14179782 - 14179708
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  14179782 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaa 14179708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 251
Target Start/End: Complemental strand, 16796875 - 16796747
Alignment:
Q  123 ctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttgaacccttgggtaggattaaga 222  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||||||||| | | ||||  ||||||||||| |||||||| |||||||    
T  16796875 ctctcgcctcgcgagtgacccggaaacagagtgccttgtgagactttgcgacctttgttgcacgaattgttaagagttgaacctttgggtagcattaaga 16796776  T
Q  223 cttaataataaggttaattataatctgtg 251  Q
    |||||| |  ||| |||||||||| ||||    
T  16796775 cttaatgaagaggctaattataatatgtg 16796747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 4588476 - 4588547
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4588476 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctg 4588547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 43842639 - 43842572
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattga 68  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43842639 tccttagatgcttttgagtgcctgagcatgtctaataatgattaggaaagaatgtaggatgagattga 43842572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 49389304 - 49389378
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgga 75  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||    
T  49389304 tccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctgga 49389378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9513371 - 9513299
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |  || |||||||||||||||    
T  9513371 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctg 9513299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9521346 - 9521274
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |  || |||||||||||||||    
T  9521346 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctg 9521274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 12852027 - 12852169
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtgggattc 93  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||          | |||||| ||  | ||    
T  12852027 ttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaatctggaaagacttagaatgaaacttttgataatc 12852126  T
Q  94 tgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||| ||||||||||| |||||||||||||||| ||||||||||    
T  12852127 tgac-tgaactcgccatggcgagcagaggctcttgcctcgcgag 12852169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 12933970 - 12934045
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |  || ||||||||||||||||||    
T  12933970 tccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaa 12934045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 32308129 - 32308058
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| || || ||||||||||||||    
T  32308129 tccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagattggagaatgagattgaacct 32308058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 13209989 - 13210062
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  13209989 ccttagatgcttttgagtgcctaaacatgtctaat-atgattaggaaagaaagtagaatgagattgaacctggaa 13210062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 14666053 - 14665991
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  14666053 ttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaa 14665991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 14669208 - 14669146
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  14669208 ttgagtgcctgaacatgtctaatattgaataggaaagaatgtaggatgagattgaacctggaa 14669146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 14735566 - 14735504
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  14735566 ttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaa 14735504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 16104241 - 16104168
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||    
T  16104241 tccttagatgtttctgagtgcctgaacatgtctaataatgattaggaaagattggagaatgaggttgaacctgg 16104168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17247180 - 17247236
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 57  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  17247180 tccttagatgtttttgagtgccggaacatgtctaataatgattaggaaagaatgtag 17247236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 49667744 - 49667818
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||| |  || ||||||||||||||||||    
T  49667744 tccttagatg-ttttgagcgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctggaa 49667818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 324693 - 324627
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 70  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||| ||||| ||||||||||||    
T  324693 ttagatgattttgagtgcctgaatatgtataataatgattaggaaagattgtagaatgagattgaac 324627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12171777 - 12171827
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 51  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12171777 tccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 12171827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 1644343 - 1644415
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    ||||| |||| |||||||||||||||||||||| ||||||||||||||||| |  || |||||||||||||||    
T  1644343 tccttggatgtttttgagtgcctgaacatgtctgataatgattaggaaagattagagaatgagattgaacctg 1644415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16097791 - 16097719
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    |||||| ||| ||||||||| |||||||||||||||||| ||||||||||| || || |||||||||||||||    
T  16097791 tccttaaatgtttttgagtgtctgaacatgtctaataattattaggaaagattggagaatgagattgaacctg 16097719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 2050862 - 2050931
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||||||||| | |||  ||||||||||||    
T  2050862 ccttagatgtttttgagtgcctcaacatgtgtaataatgattaggaaagattctagattgagattgaacc 2050931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 52523390 - 52523462
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||||||| | |||  ||| |||||||||||||    
T  52523390 ttagatgattttgagtgcctgaacatgtgtaataattattaggaaagattctagtttgatattgaacctggaa 52523462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 1465070 - 1465145
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| |||||||||||||||| ||| | || ||||||| |||||| |||||  ||||||||||||||||||    
T  1465070 ccttagatgtttttgagtgcctgaacttgtatgatgatgattatgaaagattgtagattgagattgaacctggaat 1465145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 15471384 - 15471309
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| |||||||| ||||||||||| |||| |||||||||||||| || ||  | ||||||||||||||||    
T  15471384 ccttagatgtttttgagtccctgaacatgtataatgatgattaggaaagattggagattaagattgaacctggaat 15471309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 1644447 - 1644489
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  1644447 acctgaactcgccatggcgagcagaggctctcgcctcgcgagt 1644489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 32308025 - 32307983
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  32308025 acctgaactcgccatggcgagcagaggctctcgcctcgcgagt 32307983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 49667848 - 49667890
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  49667848 acctgaactcgccatggcgagcagaggctctcgcctcgcgagt 49667890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 14234950 - 14234881
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    ||||||||  |||||||||||||||||||| |||| |||||||||||||| | |||  ||||||||||||    
T  14234950 ccttagatttttttgagtgcctgaacatgtataatgatgattaggaaagattatagattgagattgaacc 14234881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 22109938 - 22110007
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||  | |||  ||||||||||||||    
T  22109938 ttagatgtttttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctg 22110007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 839668 - 839609
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  839668 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 839609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 137
Target Start/End: Complemental strand, 12340107 - 12340068
Alignment:
Q  98 ctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  12340107 ctgaactcgccatggcgagcagaggctctcgcctcgcgag 12340068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 19725669 - 19725720
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||| || |||||||| |||||||||| ||||||||||||||||    
T  19725669 tgggattctgacttgtactcgccatggcgagcagatgctctcgcctcgcgag 19725720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 24188199 - 24188140
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  24188199 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 24188140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 55149400 - 55149341
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  55149400 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 55149341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 12934075 - 12934117
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  12934075 acctgaactcgccatggcgagcagagactctcgcctcgcgagt 12934117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 15691950 - 15692019
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  15691950 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 15692019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 23704441 - 23704510
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  23704441 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23704510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 23722897 - 23722966
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  23722897 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23722966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 23741353 - 23741422
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  23741353 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23741422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 41201470 - 41201539
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  41201470 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 41201539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 43927638 - 43927597
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattag 45  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  43927638 ttagatgattttgagtgcctgaacatgtataataatgattag 43927597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 14501659 - 14501615
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||    
T  14501659 ccttagatgattttgagtgcctgaatatgtataataatgattagg 14501615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 137
Target Start/End: Complemental strand, 20723422 - 20723298
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttg-tgggattctgacctgaactcgccacgg 112  Q
    |||||||| |||||||  ||| ||||||||||||| ||||||||||  ||||||||||| |||  | | | | |||||  ||| | || |||||||| ||    
T  20723422 ttgagtgcttgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacctagaacaacattagttgggaagctggcttgtactcgccatgg 20723323  T
Q  113 cgagcagaggctctcgcctcgcgag 137  Q
    |||| ||| ||||||||||||||||    
T  20723322 cgagtagatgctctcgcctcgcgag 20723298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 23275201 - 23275133
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 70  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||  |||||||||||    
T  23275201 ccttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaac 23275133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 1598238 - 1598289
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  1598238 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 1598289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 3834022 - 3833971
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  3834022 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 3833971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 7110034 - 7109999
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7110034 actcgccacggcgagcagatgctctcgcctcgcgag 7109999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 7113969 - 7113934
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7113969 actcgccacggcgagcagatgctctcgcctcgcgag 7113934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 137
Target Start/End: Complemental strand, 14665960 - 14665921
Alignment:
Q  98 ctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  14665960 ctgaactcgcaatggcgagcagaggctctcgcctcgcgag 14665921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 137
Target Start/End: Complemental strand, 14669115 - 14669076
Alignment:
Q  98 ctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||| ||||||||||||||||| |||||||||    
T  14669115 ctgaactcgccatggcgagcagaggctctcacctcgcgag 14669076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 137
Target Start/End: Complemental strand, 14735473 - 14735434
Alignment:
Q  98 ctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  14735473 ctgaactcgcaatggcgagcagaggctctcgcctcgcgag 14735434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 17242320 - 17242269
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  17242320 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 17242269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 22322000 - 22321965
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  22322000 actcgccacggcgagcagatgctctcgcctcgcgag 22321965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 22337055 - 22337020
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  22337055 actcgccacggcgagcagatgctctcgcctcgcgag 22337020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Original strand, 27409417 - 27409452
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27409417 actcgccacggcgagcagatgctctcgcctcgcgag 27409452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 38814732 - 38814681
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  38814732 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 38814681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 316654 - 316612
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||    
T  316654 ttagatgtttttgagtgcctgaatatgtataataatgattagg 316612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 324591 - 324549
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    ||||||||||||||  ||||| |||||||||||||||||||||    
T  324591 acctgaactcgccatagcgagtagaggctctcgcctcgcgagt 324549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 605952 - 606026
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||| |||||||||||||||  ||| |||||||||||||| ||   | |||  |||||||||||||||||    
T  605952 ccttagatgattttgagtgcctgaatgtgtataataatgattaggcaattttctagattgagattgaacctggaa 606026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 13251153 - 13251095
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 60  Q
    |||| ||||| ||||||| |||||||||| ||| || |||||||||| |||||||||||    
T  13251153 ccttggatgcctttgagtacctgaacatgcctagtattgattaggaatgaatgtaggat 13251095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Complemental strand, 13257799 - 13257741
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 60  Q
    |||| ||||| ||||||| |||||||||| ||| || |||||||||| |||||||||||    
T  13257799 ccttggatgcctttgagtacctgaacatgcctagtattgattaggaatgaatgtaggat 13257741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 137
Target Start/End: Complemental strand, 16097687 - 16097645
Alignment:
Q  95 gacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||| || ||| ||||||||||||||||||||    
T  16097687 gacctgaactcgccatggtgagtagaggctctcgcctcgcgag 16097645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 41092030 - 41092076
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 59  Q
    |||||||||||||||||| ||| || |||||||||| ||||||||||    
T  41092030 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtagga 41092076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 42386767 - 42386725
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||||||||| |||||| |||||||||| ||||||||||    
T  42386767 acctgaactcgccatggcgagtagaggctctcacctcgcgagt 42386725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 45797701 - 45797659
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||    
T  45797701 ttagatgattttgagtgcctgaatatgtataataatgattagg 45797659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 49389408 - 49389446
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgc 134  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  49389408 acctgaactcgccatggcgagcagaggttctcgcctcgc 49389446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 1465174 - 1465215
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||| |||| |||||| ||||||||||||||||||||    
T  1465174 acctgaacttgccatggcgagtagaggctctcgcctcgcgag 1465215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 4291194 - 4291149
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 58  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||||    
T  4291194 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtagg 4291149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 9513265 - 9513228
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcg 133  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  9513265 acctgaactcaccatggcgagcagaggctctcgcctcg 9513228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 9521240 - 9521203
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcg 133  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  9521240 acctgaactcaccatggcgagcagaggctctcgcctcg 9521203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 11070504 - 11070435
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||  ||||||||||| ||||||||||    
T  11070504 ccttggatgccttagagtgcctgaacatacctagtattgattaggattgaatgtaggatcagattgaacc 11070435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 11165202 - 11165271
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||  ||||||||||| ||||||||||    
T  11165202 ccttggatgccttagagtgcctgaacatacctagtattgattaggattgaatgtaggatcagattgaacc 11165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 13210096 - 13210133
Alignment:
Q  100 gaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  13210096 gaactcgccatggcgagtagaggctctcgcctcgcgag 13210133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 14499761 - 14499692
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||  ||||||||||| ||||||||||    
T  14499761 ccttggatgccttagagtgcctgaacatacctagtattgattaggattgaatgtaggatcagattgaacc 14499692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 15726604 - 15726673
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| ||||| ||||| ||||||||||    
T  15726604 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgaaggatcagattgaacc 15726673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 17710275 - 17710320
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 58  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||||    
T  17710275 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtagg 17710320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 28350846 - 28350903
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    ||||||||||||||||  ||| | ||||||||||| ||||||||||  ||||||||||    
T  28350846 ttgagtgcctgaacatacctagtgatgattaggaatgaatgtaggacaagattgaacc 28350903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 30066382 - 30066313
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||  ||||||||||| ||||||||||    
T  30066382 ccttggatgccttagagtgcctgaacatacctagtattgattaggattgaatgtaggatcagattgaacc 30066313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 37250932 - 37250973
Alignment:
Q  97 cctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||||||||  ||||| |||||||||||||||||||||    
T  37250932 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 37250973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 55023281 - 55023212
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||  ||||||||||| ||||||||||    
T  55023281 ccttggatgccttagagtgcctgaacatacctagtattgattaggattgaatgtaggatcagattgaacc 55023212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 12171869 - 12171909
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcga 136  Q
    ||||||||| |||| |||||| |||||||||||||||||||    
T  12171869 acctgaactggccatggcgagtagaggctctcgcctcgcga 12171909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 12378456 - 12378412
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||||| ||||||||||||||| ||||  |||||||||||||    
T  12378456 ccttagatgattttgagtgcctgaatatgtacaataatgattagg 12378412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 22110116 - 22110156
Alignment:
Q  97 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||  ||||| ||||||||||||||||||||    
T  22110116 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 22110156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 23412834 - 23412878
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||||| ||||||||||||||| |||| ||| ||||||||||    
T  23412834 ccttagatgattttgagtgcctgaatatgtataaaaatgattagg 23412878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 53380030 - 53380082
Alignment:
Q  8 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 60  Q
    |||| |||||||||||||||||  ||| || |||||||||| |||||||||||    
T  53380030 atgcctttgagtgcctgaacatacctagtattgattaggaatgaatgtaggat 53380082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 53386682 - 53386734
Alignment:
Q  8 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 60  Q
    |||| |||||||||||||||||  ||| || |||||||||| |||||||||||    
T  53386682 atgcctttgagtgcctgaacatacctagtattgattaggaatgaatgtaggat 53386734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 13944 - 13695
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||| ||||    
T  13944 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaggatgtagcatgagattgaacctggaattaaacttgtgagattctgagctga 13845  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||    
T  13844 actcgccacggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgttagattttgcgacttttgttgcacgagttgtcgagagttg 13745  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||| || |||||||||||||||||| ||| |||||||||||||||||||    
T  13744 aacctttcggtaggattaagacttaacaatgaggttaattataatctgtg 13695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 20309554 - 20309305
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20309554 ccttatatgcttttgagtgcctggatatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 20309455  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | | |||||||||||||    
T  20309454 actcgccacggtgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgacttgttagattttgcgacccttgttgcacgatttgtcgagagttg 20309355  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  20309354 aacccttgggtaggattaagacttaagaatgaggttaactataatctgtg 20309305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 37788 - 38034
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  37788 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaagatgtaggatgagattgaacctggaattaaacttgtgagattctaacctga 37887  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||| | |||||||||||||||    
T  37888 actcgccacggcgagcagaggctctcgcctcgcgagcgacccagaaacatagtgacttgttagactttgcgacctttgttgcacgagttgtcgagagttg 37987  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatct 248  Q
    |||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  37988 aacctttgggtaggattaagacttaacaatgaggttaattataatct 38034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 23286310 - 23286061
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| |||| ||||||||    
T  23286310 ccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacatggaatgaaaattgtgagattatgacctga 23286211  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||   |||||| ||||||||    
T  23286210 actcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgttagattttgcgacctttgttgcatgagttgttgagagttg 23286111  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||| |||||||| ||||||||||||| |  | |||||||||||||||||    
T  23286110 aacctttgggtagtattaagacttaatgaagatgttaattataatctgtg 23286061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 298475 - 298735
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||          | ||||||||||||    
T  298475 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatataggatgagattgaacctggaaagatttagaatgaaacttgtggga 298574  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagtt 190  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  298575 ttctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgagtt 298674  T
Q  191 gtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    || |||  || |||| |||||||| ||||||||||||| |  ||||||| |||||| ||||    
T  298675 gttgaggattaaacctttgggtagcattaagacttaatgaagaggttaactataatatgtg 298735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 23654071 - 23654307
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||    
T  23654071 ccttagatgcttttgactgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaactgttgggattctgacttga 23654170  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||||||||||||             |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  23654171 actcgccacggcgagca-------------cgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgagttgtcgagagttg 23654257  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||| |||||||| ||||||||||||| |  |||||||||||||||||||    
T  23654258 aacctttgggtagcattaagacttaatgaagaggttaattataatctgtg 23654307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 27754036 - 27753775
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||           | |||||||||||    
T  27754036 tccttagatgcttttgagtgcctcaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggg 27753937  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||| | |||    
T  27753936 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaacagagtgccttgttagattttgcgaccttcgttgcacgagt 27753837  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||||||||||| | | || ||| ||||||||||||| || | |||||||||||| ||||    
T  27753836 tgtcgagagttgaagcttgggatagcattaagacttaatgatgatgttaattataatatgtg 27753775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 32451589 - 32451824
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||           | |||||||||||    
T  32451589 tccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacatggaaagattgtagaatgaaacttgtggg 32451688  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  32451689 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgagt 32451788  T
Q  190 tgtcgagagttgaacccttgggtaggattaagactt 225  Q
    ||||||||| |||||| | |||||| ||||||||||    
T  32451789 tgtcgagagatgaaccttggggtagcattaagactt 32451824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 22737840 - 22738101
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||           | |||||||||||    
T  22737840 tccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagaatgtaggatgagattgaacctagaaagattgtagaatgaaacttgtggg 22737939  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||| | |||    
T  22737940 attctgaactgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggttttgcgacctttgttgcacgagt 22738039  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||| ||||||| | |||||| ||||||||||||| |  | |||||||||||||||||    
T  22738040 tgttgagaattgaaccttggggtagtattaagacttaatgaggatgttaattataatctgtg 22738101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 22730893 - 22731155
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           | |||||||||||    
T  22730893 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggg 22730992  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| ||||| |||||||||||||||| |||||||| |||||||| ||||||||| | ||     
T  22730993 attctgacctgaactcgccacggggagcaaaggctctcgcctcacgagtcacccagaaacagagtgccttgttaggttttgcgatctttgttgcacgagc 22731092  T
Q  190 tgtcgagagttgaaccct-tgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| || | ||||||| |  |||||| ||||||||||||| |  | |||||||||||||||||    
T  22731093 tgttgataattgaaccttgggggtagtattaagacttaatgaggatgttaattataatctgtg 22731155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 23076901 - 23076642
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||          | |||||| ||| |    
T  23076901 tccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattggacctggaaagatttagaatgaaactt-tggaa 23076803  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagtt 190  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||| | ||||    
T  23076802 ttctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagttacccagaaacagagtgccttgttaggttttgcgacctttgttgcacgagtt 23076703  T
Q  191 gtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    || |||||||||||  | |||||| |||  || || || || | |||||||||||||||||    
T  23076702 gttgagagttgaactttggggtagtattgggattttatgatgatgttaattataatctgtg 23076642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 22337576 - 22337315
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||          | |||||| | |      
T  22337576 tccttagatgcttttgagtgtatgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatttagaatgaaactttttgag 22337477  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| | ||||| |||||||||||| | |||    
T  22337476 ttctgacctgaattcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgtgacctttgttgcacgagt 22337377  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||||||||||| | | |||| ||||||||||||| || | |||||||||||| ||||    
T  22337376 tgttgagagttgaaccttggagtagtattaagacttaatgatgatgttaattataatttgtg 22337315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 23660483 - 23660227
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||           | |||||| |||     
T  23660483 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaacttttgga 23660384  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaag 188  Q
    || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| | ||||| ||||||| |||| | ||    
T  23660383 at-ctgacctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccagaaacagagtgccttgttaggtttttgtgacctttattgcacgag 23660285  T
Q  189 ttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataat 246  Q
    || | |||||||||||| | |||||| ||| ||||||| | || | ||||||||||||    
T  23660284 ttattgagagttgaaccttggggtagtattgagacttattgatgatgttaattataat 23660227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 23071624 - 23071768
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtgggat 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          |||| ||| ||  | ||     
T  23071624 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 23071723  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||    
T  23071724 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 23071768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 22133877 - 22133948
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||    
T  22133877 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 22133948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 28291963 - 28292027
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagatt 66  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  28291963 ccttagatgcttttgagtgcctgaacatgtctaagaatgattaggaaagaatgtagaatgagatt 28292027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 28406436 - 28406368
Alignment:
Q  5 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||||||||||    
T  28406436 tagatgcttttgagtgcctgaacatgtctaataataattaggaaagattggagaatgagattgaacctg 28406368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 25176302 - 25176227
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||  || ||  ||||||||||||||||||    
T  25176302 ccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaaggttggagattgagattgaacctggaat 25176227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 136
Target Start/End: Original strand, 22133977 - 22134020
Alignment:
Q  93 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcga 136  Q
    |||| |||||||||||| ||||||||||||||||||||||||||    
T  22133977 ctgaactgaactcgccatggcgagcagaggctctcgcctcgcga 22134020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 22740717 - 22740768
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||| |||| | |||||||||||||||||||||| ||||||||||||||||    
T  22740717 tgggaatctggcttgaactcgccacggcgagcagatgctctcgcctcgcgag 22740768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 24503532 - 24503473
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  24503532 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 24503473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 12829492 - 12829434
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  12829492 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 12829434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 39827602 - 39827648
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaag 50  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  39827602 ttagatgattttgagtgcctgaatatgtataataatgattaggaaag 39827648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 23207812 - 23207744
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||| || ||||||||||||||||| |||||||||||||| |||  | |||  |||||||||||||    
T  23207812 ttagatgattatgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacct 23207744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 205
Target Start/End: Original strand, 23708383 - 23708493
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt--agattttgcgacctttgttgctcaagttgtc 193  Q
    ||||||||||||||  ||||| |||||||||||||| |||||| ||||||  ||||| || ||||||   |||||||||| |||||| || | ||||||     
T  23708383 acctgaactcgccatagcgagtagaggctctcgccttgcgagttacccagttacagaatg-cttgtttaggattttgcgatctttgtcgcacgagttgtt 23708481  T
Q  194 gagagttgaacc 205  Q
    || |||||||||    
T  23708482 gatagttgaacc 23708493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Original strand, 12901286 - 12901321
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12901286 actcgccacggcgagcagatgctctcgcctcgcgag 12901321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 22460948 - 22460999
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  22460948 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 22460999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 246
Target Start/End: Complemental strand, 23060815 - 23060717
Alignment:
Q  147 aacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataat 246  Q
    ||||||||| |||||||| |||||||||||||||| | | |||||| |||| ||||||  | |||||| |||  |||||||| || | ||||||||||||    
T  23060815 aacagagtgccttgttaggttttgcgacctttgtt-cacgagttgttgagaattgaactttggggtagtattgggacttaatgatgatgttaattataat 23060717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 23171460 - 23171413
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 60  Q
    |||||||||||||||||| ||| || |||||||||| |||||||||||    
T  23171460 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtaggat 23171413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 23582717 - 23582670
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 60  Q
    |||||||||||||||||| ||| || |||||||||| |||||||||||    
T  23582717 tttgagtgcctgaacatgcctagtattgattaggaatgaatgtaggat 23582670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Original strand, 24628252 - 24628287
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  24628252 actcgccacggcgagcagatgctctcgcctcgcgag 24628287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 24649689 - 24649654
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  24649689 actcgccacggcgagcagatgctctcgcctcgcgag 24649654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Original strand, 27379206 - 27379241
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27379206 actcgccacggcgagcagatgctctcgcctcgcgag 27379241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Original strand, 27383252 - 27383287
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27383252 actcgccacggcgagcagatgctctcgcctcgcgag 27383287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 27602129 - 27602094
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27602129 actcgccacggcgagcagatgctctcgcctcgcgag 27602094  T

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Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Original strand, 41530783 - 41530818
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  41530783 actcgccacggcgagcagatgctctcgcctcgcgag 41530818  T

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Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 21138955 - 21139013
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||| ||  ||||||||||    
T  21138955 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtatgacaagattgaacc 21139013  T

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Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 22412722 - 22412792
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    ||||||| || ||||||||||||||||| | |||||||||||| |||  | |||  |||||||||||||||    
T  22412722 ttagatgattctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgg 22412792  T

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Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 23005263 - 23005221
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  23005263 ttagatgtttttgagtgcctgaacatgtataagaatgattagg 23005221  T

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Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 27197302 - 27197248
Alignment:
Q  18 gtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  27197302 gtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 27197248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 28406335 - 28406297
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgc 134  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  28406335 acctgaactcgccatggcgagtagaggctctcgcctcgc 28406297  T

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Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 34137454 - 34137412
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  34137454 ttagatggttttgagtgcctgaacatgtataagaatgattagg 34137412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 25176199 - 25176158
Alignment:
Q  95 gacctgaactcgccacggcgagcagaggctctcgcctcgcga 136  Q
    ||||||||||||||| |||||| |||||| ||||||||||||    
T  25176199 gacctgaactcgccatggcgagtagaggccctcgcctcgcga 25176158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 31756268 - 31756232
Alignment:
Q  101 aactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  31756268 aactcgccatggcgagtagaggctctcgcctcgcgag 31756232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 37318700 - 37318652
Alignment:
Q  10 gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 58  Q
    |||| |||||||||||||||  ||| ||||||||||||| |||||||||    
T  37318700 gcttatgagtgcctgaacatacctagtaatgattaggaatgaatgtagg 37318652  T

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Target: scaffold1842 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 721 - 967
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || | |||||||||||||||||||||||    
T  721 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacctagattgaaacttgtgggattctgacctga 820  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||    
T  821 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgaattgtcgagagttg 920  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatct 248  Q
    |||| |||||||| ||||||||||||| |  ||||||||||||||||    
T  921 aacctttgggtagcattaagacttaatgaagaggttaattataatct 967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 199; Significance: 1e-108; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 167651 - 167897
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || | |||||||||||||||||||||||    
T  167651 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacctagattgaaacttgtgggattctgacctga 167750  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||    
T  167751 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgaattgtcgagagttg 167850  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatct 248  Q
    |||| |||||||| ||||||||||||| |  ||||||||||||||||    
T  167851 aacctttgggtagcattaagacttaatgaagaggttaattataatct 167897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 52373 - 52113
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           | |||||||||||    
T  52373 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggg 52274  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||| ||||||| | |||    
T  52273 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaactgagtgtcttgttaggttttgcgacc-ttgttgcacgagt 52175  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||||||||||| | |||||| ||||||||||||| || | |||||||||||||||||    
T  52174 tgttgagagttgaaccttggggtagtattaagacttaatgatgatgttaattataatctgtg 52113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 31971704 - 31971455
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31971704 ccttagatgcttttgtgtgcctgaacatgtctaataatgattaggaaaggatgtaggatgagattgaacctggaattaaacttgtgagattctgacctga 31971605  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||||||| ||||||||||||||| || ||||||||| |||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||| ||    
T  31971604 actcgccccggcgagcagaggctgtcacctcgcgagcgacccagaaatagagtgacttgttagattttgcgacctttgttgcacgagttgtcgagagctg 31971505  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||||||||    
T  31971504 aacctttgggtaggattaagacttaacaatgaggttaattataatctgtg 31971455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 16199319 - 16199567
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  16199319 ccttggatgcttttgagtgccttaacatgtcttataatgattaggaaagaatgtaggatgagattgaacctagaattaaact-gtgggattctgacctga 16199417  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||| | |||||||||||||||    
T  16199418 actcgccacagcgagcagacgctctcgcctcgcgagtgacccaaaaacagagtgacttattggattttgcgacctttgttgcacgagttgtcgagagttg 16199517  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  16199518 aacccttgggtaggattaagacttaacaatgaggttaattataatctgtg 16199567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 21918671 - 21918921
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatt-aaacttgtgggattctgacctg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  21918671 ccttagatgctttggagtgcctgaacatgtctaataatgattagaaaagaatgtaggaagagattgaacctggaaatgaaacttgtgggattctgacctg 21918770  T
Q  101 aactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagtt 200  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  21918771 aactcgccatggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgttagattttgcgacctttgttgcatgagttgtcgagagtt 21918870  T
Q  201 gaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||||||||||||| |||||||||||||  || ||||||||||  |||||||    
T  21918871 gaacccttgggtaagattaagacttaacgatgaggttaattacgatctgtg 21918921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 25362812 - 25363061
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25362812 ccttagatgcctttgagtgactgaacatgactaataatgattaggaaagaatgtaggatgagattgaacctggaatgaaacttgtgggattctgacctga 25362911  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||| ||||||||||||||||||||||| ||||||||| ||||||||||| ||||| ||| |||||||||||| |||| | |||||| ||||||||    
T  25362912 actcgccatggcgagcagaggctctcgcctcgagagtgacccggaaacagagtgccttgtgagactttgcgacctttcttgcacgagttgttgagagttg 25363011  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||| |||||||| ||||||||||||| |  ||| |||||||||||||||    
T  25363012 aacctttgggtagtattaagacttaatgaagaggctaattataatctgtg 25363061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 18878897 - 18879158
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           | |||||||||||    
T  18878897 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggg 18878996  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| | |||    
T  18878997 attctgacctgaactcgccaagacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagattttgcggcctttgttgcacgagt 18879096  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||||||||||||| | || ||| || |||||||||| || | ||||| |||||||||||    
T  18879097 tgtcgagagttgaaccttgggatagcatcaagacttaatgatgatgttaactataatctgtg 18879158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 20536668 - 20536408
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggga 90  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||           | |||||| |||||    
T  20536668 ccttagatgcttttgagtgcctgaacatgtctgataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttatggga 20536569  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagtt 190  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | ||||    
T  20536568 ttctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgacttattaggttttgcgacctttgttgcacgagtt 20536469  T
Q  191 gtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||| |||||||| | |||||| ||||||||||||| |  | |||||||||||||||||    
T  20536468 gtcgagtgttgaaccttggggtagtattaagacttaatgaggatgttaattataatctgtg 20536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 45130692 - 45130919
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45130692 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 45130791  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||||||                      |||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||    
T  45130792 actcgc----------------------ctcgcgagtgacccagaaacagagtgacttattagattttgcgacctttgttgcacgagttgtcgagagttg 45130869  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
     ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45130870 gacccttgggtaggattaagacttaataatgaggttaattataatctgtg 45130919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 18818070 - 18818330
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||           | |||||| |||     
T  18818070 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtaaaatgaaacttttggt 18818169  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| | |||    
T  18818170 -ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggttttgcgacctttgttgcacgagt 18818268  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| ||||||||||   | |||||| ||||||||||||| |  | |||||||||||||||||    
T  18818269 tgttgagagttgaaatttagggtagtattaagacttaatgaggatgttaattataatctgtg 18818330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 21923588 - 21923849
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtggga 90  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||          |||| |||||| | |||    
T  21923588 tccttagatgcttttgagtgtctgaacatgtctaataatgattaggacagaatgtaggatgagattgaacctgaaaagatttagaatgaaactttttgga 21923687  T
Q  91 ttctgacc-tgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| | |||    
T  21923688 ttctgaccctgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggttttgcgacctttgttgcccgagt 21923787  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
     || |||||||||||| |  ||||| ||||||||||||| || | |||||||||||||||||    
T  21923788 agttgagagttgaaccttgaggtagtattaagacttaatgatgatgttaattataatctgtg 21923849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 23406842 - 23406628
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||           | |||||||||||    
T  23406842 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagattgtagaatgaaacttgtggg 23406743  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||| | |||    
T  23406742 attctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggttttgtgacctttgttgcacgagt 23406643  T
Q  190 tgtcgagagttgaac 204  Q
    | | |||||||||||    
T  23406642 tattgagagttgaac 23406628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 28648704 - 28648965
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||          | |||| | | | |    
T  28648704 tccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgaacatggaaagatttagaatgaaaccttttgaa 28648803  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
    || |||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||| ||||||| |||||||||||||||||||| | |||    
T  28648804 ttttgacctgaactcgccacggcgagcagaggctctcgccttgcgcatgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagt 28648903  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||||||||||| | |||||| ||| ||||||||| || | |||||||||||| ||||    
T  28648904 tgttgagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatatgtg 28648965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 6759718 - 6759456
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatta-----------aacttgtggg 89  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||           ||||| |||     
T  6759718 tccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacttggaaatattttagaatgaaacttttgga 6759619  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaag 188  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| | || ||| || ||||    
T  6759618 aatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggattttgcaatctgtgtcgcacaag 6759519  T
Q  189 ttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||   ||||||||||| | |||||| ||| ||||||||| || | |||||||||||||||||    
T  6759518 ttgctaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtg 6759456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 22627196 - 22626935
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatta----------aacttgtggga 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |          ||| | ||| |    
T  22627196 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctcgaaagattgtagaatgaacctttggaa 22627097  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
     ||||||| ||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||| | |||||||||||||||||| | |||    
T  22627096 atctgacccgaacttgccacggcgagcagaggctctcgcctcgcgagtgatctagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagt 22626997  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||||||||||| | |||||| ||| ||||||||| |  | |||||||||||||||||    
T  22626996 tgttgagagttgaaccttggggtagtattgagacttaatgaggatgttaattataatctgtg 22626935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 23649014 - 23648754
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaac-ttgtggg 89  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||          |||| |||| || |||     
T  23649014 tccttagatgcttttgagtgactgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctgaaaagacttagaatgaaacattttgga 23648915  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattt-tgcgacctttgttgctcaag 188  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||| |||| ||||||||||||||||||||||||| ||| ||||||||||||||| | ||    
T  23648914 attctgacc-gaactcgccatggcgatcagaggctctcgcctcgtgagtaacccagaaacagagtgacttgttaggtttatgcgacctttgttgcacgag 23648816  T
Q  189 ttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgt 250  Q
    |||| |||||||||||| | |||||| |||||||| |||| || | ||||||||||||||||    
T  23648815 ttgttgagagttgaaccttggggtagtattaagacctaatgatgatgttaattataatctgt 23648754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16092001 - 16092257
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----ttaaa------cttgtggga 90  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||| ||    |||||      ||| ||| |    
T  16092001 tccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtagaatgagattaaacctgaaaagatttaaaaaaaaacttttggaa 16092100  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||| |||||||||| || |||  | |||||    
T  16092101 ttctgacctgaactcgccacggcgagcagaggctctcgcctcccgagtgacccagaaacagagtgccctgttaggattttgcgatctgtgtcacacaagt 16092200  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataat 246  Q
    |||  ||||||||||| | |||||  ||| ||||||||  || | ||||||||||||    
T  16092201 tgttaagagttgaaccttggggtaatattgagacttaaggatgatgttaattataat 16092257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 22875526 - 22875265
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    |||||||||||||||||| | || ||||||| ||||||||||||||||||| ||||| | ||| ||||||||||||           | |||||| ||||    
T  22875526 tccttagatgcttttgagcgtctaaacatgtttaataatgattaggaaagattgtagaacgaggttgaacctggaaagattttagaatgaaactt-tggg 22875428  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaag 188  Q
    | |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||| || ||| || ||||    
T  22875427 aatctgacctgaactcgccatgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagggctttgcgatctatgtcgcacaag 22875328  T
Q  189 ttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||||  ||||||||||| | |||||| ||| |||  ||||  | | |||||||||||||||||    
T  22875327 ttgttaagagttgaaccttggggtagtattgagatgtaatggtgatgttaattataatctgtg 22875265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 41598644 - 41598494
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaattaaacttgtggga 90  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||           |||| |||||| |||||    
T  41598644 ccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactt-tggga 41598546  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacc 142  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41598545 atctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacc 41598494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 7373210 - 7372970
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaattaaacttgtggg 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||           |||| |||||||||      
T  7373210 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctggaaagattgtagaatgaaacttgtgaa 7373111  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    ||||||||||||||||||||||||                     ||||||||||||||||||||| |||||||| |||||||||||||||||| | |||    
T  7373110 attctgacctgaactcgccacggc---------------------gagtgacccagaaacagagtgtcttgttaggttttgcgacctttgttgcacgagt 7373032  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||||||||||  | |||| | | | ||||||||| |  | |||||||||||||||||    
T  7373031 tgttgagagttgaactttggggtggtagtgagacttaatgaggatgttaattataatctgtg 7372970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 5865938 - 5866082
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtgggat 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          |||| ||| ||  | ||     
T  5865938 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 5866037  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||    
T  5866038 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 5866082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 17141373 - 17141302
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17141373 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 17141302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 21255679 - 21255605
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21255679 ccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 21255605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 21491452 - 21491382
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21491452 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 21491382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 21249841 - 21249767
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21249841 ccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaa 21249767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 21674155 - 21674091
Alignment:
Q  12 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  21674155 ttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 21674091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19801087 - 19801163
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||| |  || || ||||||||||||||||    
T  19801087 tccttagatgcatatgagtgcctgaacatgtctaataatgattaggaaagactagagaataagattgaacctggaat 19801163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 26355358 - 26355433
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||| ||| || ||  |||||||||||||||||    
T  26355358 tccttaaatgtttttgagtgcctgaacatgtctaataatgattaggagagattgaagattgagattgaacctggaa 26355433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 38854912 - 38854987
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||  | ||||| ||||||||||    
T  38854912 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagatttaacctggaat 38854987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 39834292 - 39834217
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| |||||||||||| ||| ||| | ||||||||||||||||| |||||  ||||||||||||||||||    
T  39834292 ccttagatgtttttgagtgcctaaacttgtatgataatgattaggaaagattgtagattgagattgaacctggaat 39834217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 6520828 - 6520779
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 51  Q
    ||||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  6520828 ccttagatgtttttgagtgtctgaacatgtctaataataattaggaaaga 6520779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 20499118 - 20499049
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||  | |||  ||||||||||||||    
T  20499118 ttagatgattttgagtgcctgaacatgtataataatgattaggtaagtttttagattgagattgaacctg 20499049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 23760511 - 23760576
Alignment:
Q  12 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    |||||||| ||||||||||||||||||||||||||||| | || |   ||||||||||||||||||    
T  23760511 ttttgagttcctgaacatgtctaataatgattaggaaatattggatattgagattgaacctggaat 23760576  T

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Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 21414888 - 21414956
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 70  Q
    ||||||||| ||||||||||||||| |||   | |||||||||||||||| ||||| ||||||||||||    
T  21414888 ccttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 21414956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 20527871 - 20527812
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  20527871 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 20527812  T

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Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 18865753 - 18865695
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  18865753 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 18865695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 17141266 - 17141229
Alignment:
Q  100 gaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| |||||||||||||||||||||||||||    
T  17141266 gaactcgccatggcgagcagaggctctcgcctcgcgag 17141229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 21249734 - 21249697
Alignment:
Q  100 gaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| |||||||||||||||||||||||||||    
T  21249734 gaactcgccatggcgagcagaggctctcgcctcgcgag 21249697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 29123518 - 29123449
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| |||||||| |||| |||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  29123518 ccttggatgctttagagtacctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 29123449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 37116882 - 37116813
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||  ||||||||||||||    
T  37116882 ttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctg 37116813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 39834188 - 39834147
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  39834188 acctgaactcgccatggcgagtagaggctctcgcctcgcgag 39834147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 17266579 - 17266647
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||  |||||||||||||    
T  17266579 ttagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacct 17266647  T

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Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 13507670 - 13507713
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattag 45  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||    
T  13507670 ccttagatgattttgagtgcctgaatatgtataataatgattag 13507713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 13597202 - 13597245
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattag 45  Q
    ||||||||| ||||||||||||||| |||| |||||||||||||    
T  13597202 ccttagatgattttgagtgcctgaatatgtataataatgattag 13597245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 15538796 - 15538745
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  15538796 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 15538745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 24433995 - 24434046
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  24433995 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 24434046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 43252145 - 43252110
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  43252145 actcgccacggcgagcagatgctctcgcctcgcgag 43252110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 46
Target Start/End: Original strand, 17085770 - 17085804
Alignment:
Q  12 ttttgagtgcctgaacatgtctaataatgattagg 46  Q
    |||||||||||||||||||| ||||||||||||||    
T  17085770 ttttgagtgcctgaacatgtataataatgattagg 17085804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 18855358 - 18855300
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||   || || |||||||||| ||||||||||| ||||||||||    
T  18855358 tttgagtgcctgaacatacgtagtattgattaggaatgaatgtaggatcagattgaacc 18855300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 24353550 - 24353488
Alignment:
Q  12 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    ||||||||||||||| |||| |||||||||||||| |||  | |||  |||||||||||||||    
T  24353550 ttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgg 24353488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 982989 - 983058
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    ||||||| ||||||||| |||||||||| || || ||||||||||||  | |||  ||||||||||||||    
T  982989 ttagatgattttgagtgtctgaacatgtatattagtgattaggaaagtttttagattgagattgaacctg 983058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 21255572 - 21255535
Alignment:
Q  100 gaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  21255572 gaactcgccatggcgagcagcggctctcgcctcgcgag 21255535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 19111653 - 19111601
Alignment:
Q  8 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 60  Q
    |||| ||||||| |||||||||| ||| || |||||||||| |||||||||||    
T  19111653 atgcctttgagtacctgaacatgcctagtattgattaggaatgaatgtaggat 19111601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 19117944 - 19117892
Alignment:
Q  8 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 60  Q
    |||| ||||||| |||||||||| ||| || |||||||||| |||||||||||    
T  19117944 atgcctttgagtacctgaacatgcctagtattgattaggaatgaatgtaggat 19117892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 21674061 - 21674021
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcga 136  Q
    |||||||||||||| |||||| |||||| ||||||||||||    
T  21674061 acctgaactcgccatggcgagtagaggccctcgcctcgcga 21674021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 21972353 - 21972393
Alignment:
Q  97 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||| ||||||||||||||||||| ||||||||| ||||||    
T  21972353 cctgtactcgccacggcgagcagatgctctcgccccgcgag 21972393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 21976438 - 21976478
Alignment:
Q  97 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||| ||||||||||||||||||| ||||||||| ||||||    
T  21976438 cctgtactcgccacggcgagcagatgctctcgccccgcgag 21976478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 137
Target Start/End: Complemental strand, 37116704 - 37116664
Alignment:
Q  97 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||  ||||| ||||||||||||||||||||    
T  37116704 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 37116664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 38855015 - 38855055
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcga 136  Q
    |||||||||||||| |||||| |||||| ||||||||||||    
T  38855015 acctgaactcgccatggcgagtagaggccctcgcctcgcga 38855055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 40492438 - 40492506
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||| ||||||||||||||| |||| ||| |||||||||| |||  | |||  |||||||||||||    
T  40492438 ttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgagattgaacct 40492506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 194; Significance: 1e-105; HSPs: 65)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 20637955 - 20638204
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  20637955 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatgaaacttgtgggattctgacctga 20638054  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||    
T  20638055 actcgccacggcgagcaaaggctctcacctcgcgagtgacccagaaacagagtgccttgttagattttgcgacctttgttgcacgagttgtcgagagttg 20638154  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||| | || ||  ||||||||||||| || | |||||||||||||||||    
T  20638155 aaccttgggataacattaagacttaatgatgatgttaattataatctgtg 20638204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 20360631 - 20360881
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctg 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20360631 tccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatgaaacttgtgggattctgacctg 20360730  T
Q  101 aactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagtt 200  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||| |||  ||    
T  20360731 aactcgccatggcgagctgaggctctcgcctcgcgagtgacccagaaacagagtgacttgttaggttttgcgacctttgttgcacgagttgttgaggatt 20360830  T
Q  201 gaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||||| |||||||| ||||||||||||| || |||||||||||||| ||||    
T  20360831 gaacctttgggtagtattaagacttaatgatgaggttaattataatatgtg 20360881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 2 - 225
Target Start/End: Original strand, 18821491 - 18821714
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18821491 ccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaatgaaacttgtgggattctgacctga 18821590  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  18821591 actcgccatggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgagttgtcgagagttg 18821690  T
Q  202 aacccttgggtaggattaagactt 225  Q
    |||| | |||||| ||||||||||    
T  18821691 aaccttggggtagcattaagactt 18821714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 16920305 - 16920551
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||| |||||||||||||||| ||| ||||||||||||    
T  16920305 ccttagatgcttttgagtgcctgaatatgtctaataatgattagaaaagaatgtaggataagattgtacctggaattaaacttatggaattctgacctga 16920404  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||| | | || ||||||||||    
T  16920405 actcgccatggcgagcagaggctctcgccttgcgagtgacccagaaacaaagtgacttgttggattttgcgacctttgttgcacgatttctcgagagttg 16920504  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatct 248  Q
    ||||||||||||| |||||||||||| ||| ||||||| ||||||||    
T  16920505 aacccttgggtagaattaagacttaagaatgaggttaactataatct 16920551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 22831951 - 22831702
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||||||||||||  ||||||||||||||| |||||||  |||||| ||||| |||||||||||||||||||||||  ||||||||| ||||||    
T  22831951 ccttagatgcttttgagtgtttgaacatgtctaatattgattagtgaagaatataggacgagattgaacctggaattaaactgatgggattctaacctga 22831852  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || | | | |||||||||||    
T  22831851 actcgccacggcgagcagaggctctcgcctcgcgagtgaccgagaaacagagtgacttgttggattttgcgacctttgtcgcacgattcgtcgagagttg 22831752  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||||||||||||| |||||||||| | ||| ||||||| |||||||||||    
T  22831751 aacccttgggtagaattaagacttgagaatgaggttaactataatctgtg 22831702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 11185951 - 11185714
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||| |||||||||||||||||||| |||| |||||||  |||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  11185951 ccttagatgcctttgagtgcctgaacatgtcgaatattgattagtgaagagtgtaggacgagattgaacctggaattaaacttatgggattctaacctga 11185852  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    |||||||||  | |    
T  11185851 actcgccacggcgagcagaggccctcgcctcgtgagtgacccagaaacatagtgacttgttagattttgcgacctttgttgcatgggttgtcgaggatcg 11185752  T
Q  202 aacccttgggtaggattaagacttaataataaggttaa 239  Q
     ||||||||||||||||||||||||||| | |||||||    
T  11185751 gacccttgggtaggattaagacttaatagtgaggttaa 11185714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 22779887 - 22780148
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           | |||||||||||    
T  22779887 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggg 22779986  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||| ||| |||||||||||| | |||||| ||||| |||||||||||| |||||    
T  22779987 attctgacctaaactcgccacggcaagcaaaggctctcgcctcgcgagtaacctagaaacagagtgtcctgttaggttttgtgacctttgttgcacaagt 22780086  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    || ||||||||||||| | |||||| || |||||||||| || | |||||| ||||||||||    
T  22780087 tgccgagagttgaaccttggggtagtataaagacttaatgatgatgttaatcataatctgtg 22780148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 18409487 - 18409748
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||          | |||||| | | |    
T  18409487 tccttagatgcttttgagtgccttaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaactttttgaa 18409586  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||| |||||| ||||||||||||| | |||    
T  18409587 ttctgacctgaactcgccacggcgagcagaggctctcgcctctctagtgacccagaaacagagtgccttgttaggattttacgacctttgttgcacgagt 18409686  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    | | |||||||||||| | |||||| ||| ||||||||| || | |||||||||||| ||||    
T  18409687 tattgagagttgaaccttagggtagtattgagacttaatgatgatgttaattataatatgtg 18409748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 19303201 - 19303462
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtggga 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          |||| |||||| ||| |    
T  19303201 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagatttagaatgaaacttttggaa 19303300  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||| || ||| || |||||    
T  19303301 atctgacctgaactcgccacggcgagcagaggctctcgcctcgagagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagt 19303400  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||   ||||||||||| | |||||| | | ||| ||||| || | |||||||||||||||||    
T  19303401 tgctaagagttgaaccttggggtagcactgagaattaatgatgatgttaattataatctgtg 19303462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 29061001 - 29060740
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatta----------aacttgtggga 90  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||  |          ||||| ||| |    
T  29061001 tccttagatgcttttgagtgcctgaacatgtccaataatgattaggaaggaatgtaggatgagattgaacctggaaagattgtagaatgaacttttggaa 29060902  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
     |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | |||    
T  29060901 atctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagt 29060802  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||   |||| |||||| | |||||| ||| ||||||||| || |  ||||||||||||||||    
T  29060801 tgctaagagctgaaccttggggtagtattgagacttaatgatgatattaattataatctgtg 29060740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 17287457 - 17287717
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggga 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||           | ||||||||||||    
T  17287457 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgtacctggaaagattgtagaatgaaacttgtggga 17287556  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagtt 190  Q
    ||||||||| |||||||||||||||  ||||||||| | |||| ||||||||||||||||||||| ||||||||  ||||| | ||||||||| | ||||    
T  17287557 ttctgacctaaactcgccacggcgattagaggctcttgtctcgtgagtgacccagaaacagagtgtcttgttagggtttgctatctttgttgcacgagtt 17287656  T
Q  191 gtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    || |||||||||||| | |||||| ||| ||||||||| |  | ||||||||||| |||||    
T  17287657 gttgagagttgaaccttggggtagcattgagacttaatgaggatgttaattataacctgtg 17287717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 20594234 - 20593973
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat----------taaacttgtggga 90  Q
    |||||||||| |||||||||||| |||||||||||  ||||||||| |||||||||||||||||||||||||||||           ||||||| ||| |    
T  20594234 tccttagatgtttttgagtgcctaaacatgtctaaatatgattagggaagaatgtaggatgagattgaacctggaaagattgtagaataaacttttggaa 20594135  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
     |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||| || ||| || |||||    
T  20594134 atctgacctgaactcgctacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagt 20594035  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||  || |||||||| | |||||| ||| ||||||||| |||| | |||||||||||||||    
T  20594034 tgttaagggttgaaccttggggtagtattgagacttaatgataatgataattataatctgtg 20593973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 25629016 - 25629276
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatta----------aacttgtgggat 91  Q
    ||||||||| | || || |||| ||||| |||| |||||||||||||| | ||||| |||||||||||||||||| ||          ||||| || |||    
T  25629016 ccttagatgttgttaagcgcctaaacatctctattaatgattaggaaatattgtagaatgagattgaacctggaaatattttagaataaacttttgtgat 25629115  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 190  Q
    | ||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||| | ||||    
T  25629116 tatgacctgtactcgccgtggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacttttgttgcacgagtt 25629215  T
Q  191 gtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||  ||||||||||| | |||||| ||| ||||||||| ||   |||||||||||||||||    
T  25629216 gttaagagttgaaccttggggtagtattgagacttaatgatgttgttaattataatctgtg 25629276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 28496133 - 28496280
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtggga 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||          |||| |||||| || ||    
T  28496133 tccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagacttagaatgaaacttttgaga 28496232  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||    
T  28496233 atctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 28496280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 29808543 - 29808691
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg------------gaattaaacttgtgg 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||            |||| |||||| |||    
T  29808543 tccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactt-tgg 29808641  T
Q  89 gattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    || |||||||||||||||||| ||||||||||||||||||||||||||||    
T  29808642 gaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 29808691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 18457175 - 18457029
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg---aatta------aacttgtgggat 91  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||   |||||      ||||| | |||     
T  18457175 tccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaattaagaatgaactttttggaa 18457076  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
     |||||||||||| |||| |||||| |||||||||||||||||||||    
T  18457075 gctgacctgaactagccatggcgagtagaggctctcgcctcgcgagt 18457029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 1561763 - 1561689
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  1561763 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacctggaa 1561689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 21939843 - 21939699
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtgggat 91  Q
    ||||||||||  |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||          |||| ||||||  | ||     
T  21939843 ccttagatgcccttgagtgcctgaacatgtgtaatattgattaggaaagaatgtaggatgagattgagcctggaaagacttagaataaaactttggagaa 21939744  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  21939743 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 21939699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 19652656 - 19652581
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  19652656 tccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagaatgagattgaacctggaa 19652581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 4189416 - 4189342
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  |||||||| ||||||||    
T  4189416 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaa 4189342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 4667874 - 4667948
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  |||||||| ||||||||    
T  4667874 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaa 4667948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 4674721 - 4674795
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  |||||||| ||||||||    
T  4674721 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaa 4674795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 31155059 - 31155133
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||||||||||||||||||| | ||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  31155059 ccttagatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctggaa 31155133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 15894091 - 15894237
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----tta---------aacttgtgg 88  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||  ||||||| |||||||||| ||||||||    |||         ||||  |||    
T  15894091 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctggaaagacttagaatgaaagaact--tgg 15894188  T
Q  89 gattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||||    
T  15894189 gattctgacctgaactcgccatggcgagcagagtctctcacctcgcgag 15894237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 25611384 - 25611530
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----tta---------aacttgtgg 88  Q
    |||||||||| |||||||||||||||||||||||||||||||||||  ||||| || ||||||||| ||||||||    |||         ||||  | |    
T  25611384 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcagcatgagattggacctggaaagacttagaatgaaacaact--tag 25611481  T
Q  89 gattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||    
T  25611482 gattctgacctgaactcgccatggagagcagaggctctcgcctcgcgag 25611530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 23019867 - 23019792
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||| | |||  ||||||||||||||||||    
T  23019867 ccttagatgcttttgagtgcctgaacatgtgtgataatgattaggaaagattttagattgagattgaacctggaat 23019792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 4185484 - 4185558
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||||||||||||| |||||| ||||||||| ||||| ||||||||||||  |||||||||||||||||    
T  4185484 ccttagatgcttttgagtgcatgaacaagtctaataacgattatgaaagaatgtagagtgagattgaacctggaa 4185558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 22334543 - 22334617
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||  ||||||| |||||||||| ||||||||    
T  22334543 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctggaa 22334617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 27332945 - 27333019
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||||||||||||| |||||||||| |||| |||||||||||||| | ||| ||||| ||||||||||||    
T  27332945 ccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaa 27333019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 27393685 - 27393759
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||||||||||||| |||||||||| |||| |||||||||||||| | ||| ||||| ||||||||||||    
T  27393685 ccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacctggaa 27393759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 25603057 - 25603120
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||||||||||||||||||||||||||||  ||||| | |||||||||| ||||||||    
T  25603057 tttgagtgcctgaacatgtctaataatgattaggagtgaatgcatgatgagattggacctggaa 25603120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 22080398 - 22080543
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----tta------aacttgtgggat 91  Q
    ||||||||| ||||||||| |||||||||||||||||||||||| ||||| |  ||  | |||||||||||||||    |||      ||||| |||||     
T  22080398 ccttagatgtttttgagtgactgaacatgtctaataatgattagaaaagattagagattaagattgaacctggaatagtttaagaacgaacttatgggag 22080497  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |   |||||||||||||| |||||| ||||||||||||||||||||    
T  22080498 ttatacctgaactcgccatggcgagtagaggctctcgcctcgcgag 22080543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 31164531 - 31164589
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||||||||||||| ||||    
T  31164531 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggatgagattggacct 31164589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 22331862 - 22331803
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  22331862 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 22331803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 22334648 - 22334699
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||| ||||||||| || ||||||| ||||||||||||||||    
T  22334648 tgggattctgacctaaactcgccatggtgagcagatgctctcgcctcgcgag 22334699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 25641940 - 25641991
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||| |||| | |||||||||||||||||||||| ||||||||||||||||    
T  25641940 tgggaatctggcttgaactcgccacggcgagcagatgctctcgcctcgcgag 25641991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 1538628 - 1538686
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  1538628 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 1538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 1544727 - 1544785
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  1544727 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 1544785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 4185588 - 4185629
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  4185588 acctgaactcgccatggcgagtagaggctctcgcctcgcgag 4185629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 4667978 - 4668019
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  4667978 acctgaactcgccatggcgagtagaggctctcgcctcgcgag 4668019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 16372280 - 16372223
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||| |||| ||||||||||| | ||||||||||  ||||||||||    
T  16372280 ttgagtgcctgaacatatctagtaatgattagggatgaatgtaggacaagattgaacc 16372223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 25603143 - 25603188
Alignment:
Q  88 ggattctgacctgaactcgccacggcgagcagaggctctcgcctcg 133  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||||    
T  25603143 ggattctgacttgaactcaccatggcgagcagaggctctcgcctcg 25603188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 20109673 - 20109605
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||| || ||||||||||||||||| |||||||||||||| |||  | |||  |||||||||||||    
T  20109673 ttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacct 20109605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 27333049 - 27333089
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcga 136  Q
    |||||||||||||| |||||| |||||||||||||||||||    
T  27333049 acctgaactcgccatggcgagtagaggctctcgcctcgcga 27333089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 27393789 - 27393829
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcga 136  Q
    |||||||||||||| |||||| |||||||||||||||||||    
T  27393789 acctgaactcgccatggcgagtagaggctctcgcctcgcga 27393829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 8244193 - 8244158
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  8244193 actcgccacggcgagcagatgctctcgcctcgcgag 8244158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 11567195 - 11567160
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  11567195 actcgccacggcgagcagatgctctcgcctcgcgag 11567160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 12496656 - 12496605
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  12496656 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 12496605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 135
Target Start/End: Complemental strand, 19652551 - 19652512
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcg 135  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  19652551 acctgaactcgccatggcgagtagaggctctcgcctcgcg 19652512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 19870923 - 19870888
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  19870923 actcgccacggcgagcagatgctctcgcctcgcgag 19870888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 22863278 - 22863243
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  22863278 actcgccacggcgagcagatgctctcgcctcgcgag 22863243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 23395401 - 23395366
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  23395401 actcgccacggcgagcagatgctctcgcctcgcgag 23395366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 34295751 - 34295810
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| | ||||||||||| ||||||||||  |||||||||||    
T  34295751 tttgagtgcctgaacatacctagtgatgattaggaatgaatgtaggacaagattgaacct 34295810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 25956283 - 25956357
Alignment:
Q  3 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    |||||||  ||||||||||||||||||||||||| | |||| | ||||| | |||  ||||||| ||||||||||    
T  25956283 cttagatatttttgagtgcctgaacatgtctaattacgattggaaaagattctagattgagatttaacctggaat 25956357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 30694784 - 30694738
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 60  Q
    ||||||||||||||||| ||| || |||||||||| |||||||||||    
T  30694784 ttgagtgcctgaacatgcctagtattgattaggaatgaatgtaggat 30694738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 14099049 - 14099004
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 58  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||||    
T  14099049 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtagg 14099004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 14472692 - 14472647
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 58  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||||    
T  14472692 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtagg 14472647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 16924642 - 16924687
Alignment:
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||| |||| |||||||| |||||||||| ||||||||||||||||    
T  16924642 tctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 16924687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 16929357 - 16929402
Alignment:
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||| |||| |||||||| |||||||||| ||||||||||||||||    
T  16929357 tctggcctgtactcgccatggcgagcagatgctctcgcctcgcgag 16929402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 31155163 - 31155204
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||| |||| ||| |||||||||||||||||||||||||||    
T  31155163 acctgtactctccatggcgagcagaggctctcgcctcgcgag 31155204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 34369658 - 34369715
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    ||||||||||||||||  ||| ||||||||||| | ||||||||||  ||||||||||    
T  34369658 ttgagtgcctgaacatacctagtaatgattagggatgaatgtaggacaagattgaacc 34369715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 137
Target Start/End: Complemental strand, 19668728 - 19668688
Alignment:
Q  97 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||  ||||| ||||||||||||||||||||    
T  19668728 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 19668688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 23657189 - 23657229
Alignment:
Q  97 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||| |||||||| |||||||||| ||||||||||||||||    
T  23657189 cctgtactcgccatggcgagcagatgctctcgcctcgcgag 23657229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 27327735 - 27327787
Alignment:
Q  8 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 60  Q
    |||| |||||||||||||||||  ||| || |||||||||| |||||||||||    
T  27327735 atgcctttgagtgcctgaacatacctagtattgattaggaatgaatgtaggat 27327787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 27388475 - 27388527
Alignment:
Q  8 atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 60  Q
    |||| |||||||||||||||||  ||| || |||||||||| |||||||||||    
T  27388475 atgcctttgagtgcctgaacatacctagtattgattaggaatgaatgtaggat 27388527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 2 - 250
Target Start/End: Complemental strand, 7059 - 6811
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  7059 ccttagatgcctttgagtgcctgaacgtgtctaataattattaggaaggaatgtaggatgagattgaacctggaattaaacttgagggatgctgacctga 6960  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| | |||||||||||||||    
T  6959 actcgccacggcgagcagaggctctcgcctcgcgagtgacccataaacagagtgacatgttagattttgcgacctttgttgcacgagttgtcgagagttg 6860  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgt 250  Q
    |||| |||||||||||||||| ||||| ||||||||| |||||||||||    
T  6859 aacctttgggtaggattaagatttaatgataaggttatttataatctgt 6811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 4803 - 5052
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  4803 ccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattgaacttatgggattctgacctga 4902  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||||||||  | ||||||||| |||||||||||||||||| ||||||||||||||||| || ||||||| |||||||||||| | |||||||||||||||    
T  4903 actcgccaaagagagcagaggatctcgcctcgcgagtgacacagaaacagagtgacttattggattttgagacctttgttgcacgagttgtcgagagttg 5002  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  5003 aacccttgggtaggattaagatttaataataaggttaattataatatgtg 5052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 190; Significance: 1e-103; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 11185 - 11434
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  11185 ccttagattcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatgaaacttgtgggatactgacctga 11284  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||| |||||| |||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | |||||| ||||||||    
T  11285 actcgccaaggcgagaagaggctctcacctcgcgagtgacacagaaacaaagtgacttgttagattttgcgacctttgttgcacgagttgtagagagttg 11384  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||| |||||||| ||||||||||||| || |||||||||||||||||||    
T  11385 aacctttgggtagaattaagacttaatgatgaggttaattataatctgtg 11434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 14099 - 14055
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||||| ||||||||||||||| |||| ||||||||||||||    
T  14099 ccttagatgattttgagtgcctgaatatgtataataatgattagg 14055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 2401 - 2165
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||| ||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  2401 ccttagatgcctttgagtgcctgaacgtgtctaataataattaggaaggaatgtaggatgagattgaacctggaattaaacttgagggatgctgacctga 2302  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||    
T  2301 actcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacatgttagattttgcgacctttgttgcacgagttgtcgagagttg 2202  T
Q  202 aacccttgggtaggattaagacttaataataaggtta 238  Q
    |||| |||||||||||||||||||||| |||||||||    
T  2201 aacctttgggtaggattaagacttaatgataaggtta 2165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 4 - 251
Target Start/End: Original strand, 38801065 - 38801312
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctgaac 103  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  38801065 ttagatgtctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgaacctggaattgaacttgtgggattctgacctgaac 38801164  T
Q  104 tcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttgaa 203  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  | ||||||||  |||||||    
T  38801165 tcgccacggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtgacttgttagattttgcgacctttgttgtacgagttgtcggaagttgaa 38801264  T
Q  204 cccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||||||||||||||||||||||||| || |||| |||||| ||||    
T  38801265 cccttgggtaggattaagacttaataatgagattaactataatttgtg 38801312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 27250401 - 27250650
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  27250401 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgggattgaacctggaatgaaacctgtgggattctgacctga 27250500  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||||| ||||||||||||||||||| | |||||||||||||||    
T  27250501 actcgccacgtcgagcagaggctctcgcctcgcgagtgacacagaaacagagtcccttgttatattttgcgacctttgttgcacgagttgtcgagagttg 27250600  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||| |||||||| ||| | ||||||| |  |||||||||||||||||||    
T  27250601 aacctttgggtagcattgatacttaatgaagaggttaattataatctgtg 27250650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 21027130 - 21026880
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctg 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| | |||||||||     
T  21027130 tccttagatgcttttgagtgcttgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctggaatgaaacttgtgaggttctgaccta 21027031  T
Q  101 aactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagtt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||| |||  ||    
T  21027030 aactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacaaagtgacttgttagattttgcgacctttgttgcacgagttgttgaggatt 21026931  T
Q  201 gaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
     |||| |||||||| ||||||||||||| |  |||||||||||||||||||    
T  21026930 aaacctttgggtagcattaagacttaatgaagaggttaattataatctgtg 21026880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 22355846 - 22356095
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  22355846 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatgaaatttgtgggattctgacctga 22355945  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgac-ttgttagattttgcgacctttgttgctcaagttgtcgagagtt 200  Q
    ||||||||||||||||||||||| |||| |||||||||||| |||||||||||||| ||||||||||||| |||||||||||| | ||||||||||||||    
T  22355946 actcgccacggcgagcagaggct-tcgcatcgcgagtgacctagaaacagagtgacattgttagattttgagacctttgttgcacgagttgtcgagagtt 22356044  T
Q  201 gaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||||| | || ||| ||||||||||||| || | |||||||||||||||||    
T  22356045 gaaccttgggatagcattaagacttaatgatgatgttaattataatctgtg 22356095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 22357532 - 22357781
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  22357532 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatgaaatttgtgggattctgacctga 22357631  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgac-ttgttagattttgcgacctttgttgctcaagttgtcgagagtt 200  Q
    ||||||||||||||||||||||| |||| |||||||||||| |||||||||||||| ||||||||||||| |||||||||||| | ||||||||||||||    
T  22357632 actcgccacggcgagcagaggct-tcgcatcgcgagtgacctagaaacagagtgacattgttagattttgagacctttgttgcacgagttgtcgagagtt 22357730  T
Q  201 gaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||||| | || ||| ||||||||||||| || | |||||||||||||||||    
T  22357731 gaaccttgggatagcattaagacttaatgatgatgttaattataatctgtg 22357781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 20846890 - 20847117
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| | || |||||||    
T  20846890 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctggaatgaaacttgtgaggttttgacctg 20846989  T
Q  101 aactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagtt 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||  ||    
T  20846990 aactcgccacggcgagcagaggctcttgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgagttgttgaggatt 20847089  T
Q  201 gaacccttgggtaggattaagacttaat 228  Q
     |||| |||||||| |||||||||||||    
T  20847090 aaacctttgggtagcattaagacttaat 20847117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 3 - 251
Target Start/End: Original strand, 50209875 - 50210134
Alignment:
Q  3 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtgggatt 92  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||          | |||||| ||| |||    
T  50209875 cttatatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaacttttggaatt 50209974  T
Q  93 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagttg 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | |||||    
T  50209975 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttg 50210074  T
Q  192 tcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    | |||||||||||| |||||||| ||| ||||||||| || | |||||||||||||||||    
T  50210075 ttgagagttgaacctttgggtagtattgagacttaatgatgatgttaattataatctgtg 50210134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 22354233 - 22354493
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgga-----------attaaacttgtggga 90  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||||||| || ||||||||||||||||||||||           || ||||||||||||    
T  22354233 ccttatatgcttttgagtgcttgaacatgtcttataatgattaggaaataacgtaggatgagattgaacctggatagattgtagaatgaaacttgtggga 22354332  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagtt 190  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| | ||||    
T  22354333 ttctgacctgaactcgccacggcgagtagaggctctcgcctcgcaagtgacccagaaacagagtgacttgttaggttttgcgacctttgttgcacgagtt 22354432  T
Q  191 gtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    || |||| ||||||| || ||||| ||||||||||||| |  | |||||||||||||||||    
T  22354433 gttgagaattgaacctttaggtagtattaagacttaatgaggatgttaattataatctgtg 22354493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 3 - 248
Target Start/End: Complemental strand, 34510239 - 34509983
Alignment:
Q  3 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatta----------aacttgtgggatt 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |          ||||| ||| | |    
T  34510239 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaacttttggaaat 34510140  T
Q  93 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagttg 191  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||| | |||||||||||||||||| | |||||    
T  34510139 ctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagtgtcatgttaggtttttgcgacctttgttgcacgagttg 34510040  T
Q  192 tcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatct 248  Q
    | ||| |||||||| | |||||| ||| ||||||||| || | ||||||||||||||    
T  34510039 ttgagggttgaaccttggggtagtattgagacttaatgatgatgttaattataatct 34509983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 22532730 - 22532492
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatta----------aacttgtggga 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |          ||||| ||| |    
T  22532730 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaggattgtagaatgaacttttggaa 22532631  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
     |||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| | ||     
T  22532630 atctgacttgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgacttgttaggattttgcgacctttgttgcacgagc 22532531  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaat 228  Q
    ||| |||||||||||| |  ||||| ||| |||||||||    
T  22532530 tgttgagagttgaaccttgaggtagtattgagacttaat 22532492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 20135648 - 20135387
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaac-ttgtggg 89  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||          | |||| || |||     
T  20135648 tccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctggaaagacttagaatgaaacattttgga 20135549  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattt-tgcgacctttgttgctcaag 188  Q
    ||||||||| |||||||||| |||||||||| |||||| |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||  | ||    
T  20135548 attctgacc-gaactcgccatggcgagcagaagctctcacctcgcgagtaacccagaaacagagtgacttgttaggtttatgcgacctttgttgtacgag 20135450  T
Q  189 ttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||| |||||||||||| | |||||| | |||||| |||| ||   |||||||||||||||||    
T  20135449 ttgttgagagttgaaccttagggtagtagtaagacctaatgatgttgttaattataatctgtg 20135387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 433468 - 433314
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaattaaacttgtggg 89  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||           |||| |||||| ||||    
T  433468 tccttagatgcttttgagtgtctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactt-tggg 433370  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 145  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  433369 aatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccag 433314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 20919062 - 20918917
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtggga 90  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          ||||| || ||  | ||    
T  20919062 tccttacatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatttaaatttggaga 20918963  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
     ||||| |||||||||||| |||||||||||||||||||||||||||    
T  20918962 atctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 20918917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 52927642 - 52927716
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||| || || ||||||||||||||||||    
T  52927642 ccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagattggagaatgagattgaacctggaa 52927716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21754496 - 21754423
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| || || | ||||||||||||||    
T  21754496 tccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaaagagattgaacctgg 21754423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 33681470 - 33681301
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----tta-----aacttgtggga 90  Q
    |||||||||| |||||||| |||||| |||||||||||||||||||||||| || || ||||||||||||||||||     |||     || || || ||    
T  33681470 tccttagatgtttttgagttcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacctggaaagattttagaatgaatttttgtga 33681371  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttg 160  Q
     |   |||||||||||||| |||||||||||||||||||||||||| | ||||||  |||||||| ||||    
T  33681370 gttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaattacccagttacagagtgccttg 33681301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 22921528 - 22921603
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || ||  |||||||||||| |||||    
T  22921528 ccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaaccaggaat 22921603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 20248734 - 20248664
Alignment:
Q  5 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgga 75  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||  | || |||||||||||||||||    
T  20248734 tagatgtttttgagtgcctgaacatgtctaataatgattaggaaagatcggagaatgagattgaacctgga 20248664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 21162188 - 21162117
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    ||||| ||||||||||||||||||| | ||||||||| |||| ||||||||||||| |||||||||||||||    
T  21162188 ccttaaatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctg 21162117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21301198 - 21301245
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21301198 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 21301245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 22238090 - 22238015
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||  ||||||||||||||||||||||||||||| |||||||||| || || |||||||| |||||||||    
T  22238090 tccttagatatttttgagtgcctgaacatgtctaataatggttaggaaagattggagaatgagattaaacctggaa 22238015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 20091135 - 20091281
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgt-ggga 90  Q
    |||||||||| ||||| ||||||||||||||||||| |||||||||  ||||||| |||||||||| |||||          |||| ||||   | ||||    
T  20091135 ccttagatgcctttgattgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacctgaaaagacttagaatgaaacaacttggga 20091234  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| |||||||||| | |||| |||||||||    
T  20091235 ttctgacctgaactcgccatggcgagcagatgttctcacctcgcgag 20091281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 43697820 - 43697745
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| ||||||||||||||||||||||| | |||||||| ||||| | |||  ||||||| ||||||||||    
T  43697820 ccttagatgtttttgagtgcctgaacatgtctatttatgattagaaaagattctagattgagatttaacctggaat 43697745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 21754392 - 21754350
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  21754392 acctgaactcgccatggcgagcagaggctctcgcctcgcgagt 21754350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 20524899 - 20524958
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  20524899 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 20524958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 21438216 - 21438157
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  21438216 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 21438157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 23763633 - 23763574
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  23763633 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 23763574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 28194109 - 28194180
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    |||| |||| |||||||||||||||| ||| | || |||||||||||||| |||||  ||||||||||||||    
T  28194109 ccttggatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctg 28194180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 35981352 - 35981419
Alignment:
Q  7 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    |||| |||||||||||||||| ||| | || |||||||||||||| |||||  |||||||||||||||    
T  35981352 gatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctgg 35981419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 19063942 - 19063884
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||||||||||    
T  19063942 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 19063884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 19111832 - 19111774
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||||||||||    
T  19111832 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 19111774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 21895895 - 21895965
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    ||||||| || |||||||||||||| || ||||||||||||||||||  | |||  |||||||||||||||    
T  21895895 ttagatgattatgagtgcctgaacaagtataataatgattaggaaagtttttagattgagattgaacctgg 21895965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 20637206 - 20637165
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  20637206 acctgaactcgccatggcgagtagaggctctcgcctcgcgag 20637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 21162121 - 21162080
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||| |||||||| |||||||||||||||||||||||||||    
T  21162121 acctgtactcgccatggcgagcagaggctctcgcctcgcgag 21162080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 35260718 - 35260787
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    ||||||| || ||||||||||||||||| |||||||||||||| |||  | |||  ||||||||||||||    
T  35260718 ttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctg 35260787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 16367873 - 16367945
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||  ||||| |||||||||||    
T  16367873 ttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctggaa 16367945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 41049629 - 41049701
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    ||||||||| || ||||||||||||||||| |||||||| ||||| |||  | |||  |||||||||||||||    
T  41049629 ccttagatgtttctgagtgcctgaacatgtataataatggttaggcaagtttttagattgagattgaacctgg 41049701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 12647217 - 12647166
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  12647217 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 12647166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Original strand, 16375231 - 16375266
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16375231 actcgccacggcgagcagatgctctcgcctcgcgag 16375266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 16759186 - 16759115
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    ||||||||| |||||||||||| |||| || |||||||||||||| |||  | |||  ||||||||||||||    
T  16759186 ccttagatgtttttgagtgcctaaacacgtataataatgattaggcaagtttttagattgagattgaacctg 16759115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 21407688 - 21407653
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  21407688 actcgccacggcgagcagatgctctcgcctcgcgag 21407653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 26065441 - 26065382
Alignment:
Q  15 tgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    ||||||||||||||||| |||||||||||||| |||  | |||  |||||||||||||||    
T  26065441 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 26065382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Complemental strand, 52639874 - 52639839
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  52639874 actcgccacggcgagcagatgctctcgcctcgcgag 52639839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 16381698 - 16381652
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaag 50  Q
    ||||||| ||||||||||||| |||||| ||| ||||||||||||||    
T  16381698 ttagatggttttgagtgcctggacatgtataagaatgattaggaaag 16381652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 19105175 - 19105117
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    ||||||||||| |||||  ||| ||||||||||||| ||||||||||  ||||||||||    
T  19105175 tttgagtgcctaaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 19105117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 21829136 - 21829078
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| ||  ||||||||| ||||||||||| ||||||||||    
T  21829136 tttgagtgcctgaacatacctagtatggattaggaatgaatgtaggatcagattgaacc 21829078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 21844649 - 21844591
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| ||  ||||||||| ||||||||||| ||||||||||    
T  21844649 tttgagtgcctgaacatacctagtatggattaggaatgaatgtaggatcagattgaacc 21844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 21861157 - 21861227
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    ||||||| || |||||||||||||| || |||||||||||||| |||  | |||  |||||||||||||||    
T  21861157 ttagatgattctgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgg 21861227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 52940464 - 52940506
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||| |||||||||||||||||||| ||||||| ||||||    
T  52940464 ttagatgattttgagtgcctgaacatgtataataataattagg 52940506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 1011156 - 1011087
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||  ||||||||||| ||||||||||    
T  1011156 ccttggatgccttagagtgcctgaacatacctagtattgattaggattgaatgtaggatcagattgaacc 1011087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 20248633 - 20248592
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||| |||||| ||||||| ||||||||||||    
T  20248633 acctgaactcgccatggcgagtagaggctatcgcctcgcgag 20248592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 22921631 - 22921672
Alignment:
Q  95 gacctgaactcgccacggcgagcagaggctctcgcctcgcga 136  Q
    ||| ||||||||||| |||||| |||||||||||||||||||    
T  22921631 gacttgaactcgccatggcgagtagaggctctcgcctcgcga 22921672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 26065295 - 26065254
Alignment:
Q  97 cctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||||||||  ||||| |||||||||||||||||||||    
T  26065295 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 26065254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 28194213 - 28194254
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||| ||| || ||||||||||||||||||||    
T  28194213 acctgaactcgccatggcaagtagaggctctcgcctcgcgag 28194254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 35981451 - 35981492
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||| || ||| ||||||||||||||||||||    
T  35981451 acctgaactcgccatggtgagtagaggctctcgcctcgcgag 35981492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 52927745 - 52927786
Alignment:
Q  95 gacctgaactcgccacggcgagcagaggctctcgcctcgcga 136  Q
    ||||||||||||||| |||||| |||||| ||||||||||||    
T  52927745 gacctgaactcgccatggcgagtagaggccctcgcctcgcga 52927786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 16093479 - 16093551
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||| ||||||||||||| | |||| ||||||||||| || |||  | |||  |||||||||||||||||    
T  16093479 ttagatggttttgagtgcctggatatgtataataatgatttggcaagtttttagattgagattgaacctggaa 16093551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 21342608 - 21342564
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||||| ||||||||| ||||| |||| ||||||||||||||    
T  21342608 ccttagatgattttgagtgtctgaatatgtataataatgattagg 21342564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 21347473 - 21347429
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||||| ||||||||| ||||| |||| ||||||||||||||    
T  21347473 ccttagatgattttgagtgtctgaatatgtataataatgattagg 21347429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 45310135 - 45310175
Alignment:
Q  97 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||| |||||||| |||||||||| ||||||||||||||||    
T  45310135 cctgtactcgccatggcgagcagatgctctcgcctcgcgag 45310175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 187; Significance: 1e-101; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 385 - 135
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  385 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaattaaacttgtgggattctgacctga 286  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttaga-ttttgcgacctttgttgctcaagttgtcgagagtt 200  Q
    |||||||| |||||||||||||||||||||||| ||||||||| ||  |||||||||||||||| |||||| ||||||||||| | ||||||||| ||||    
T  285 actcgccatggcgagcagaggctctcgcctcgcaagtgacccataataagagtgacttgttagatttttgcaacctttgttgcacgagttgtcgacagtt 186  T
Q  201 gaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||||| ||||||||||||||||||||| ||| ||||||| |||||||||||    
T  185 gaacctttgggtaggattaagacttaacaatgaggttaagtataatctgtg 135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 5161 - 4911
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5161 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatctggaattaaacttgtgggattctgacctga 5062  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttaga-ttttgcgacctttgttgctcaagttgtcgagagtt 200  Q
    |||||||| |||||||||||||||||||||||| ||||||||| ||  |||||||||||||||| |||||| ||||||||||| | ||||||||| ||||    
T  5061 actcgccatggcgagcagaggctctcgcctcgcaagtgacccataataagagtgacttgttagatttttgcaacctttgttgcacgagttgtcgacagtt 4962  T
Q  201 gaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||||| ||||||||||||||||||||| ||| ||||||| |||||||||||    
T  4961 gaacctttgggtaggattaagacttaacaatgaggttaagtataatctgtg 4911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 16728 - 16479
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||| ||||| ||    
T  16728 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctgaaattaaacttatgggattttgaccaga 16629  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||| | | || ||||||||||    
T  16628 actcggcacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgttggattttgtgacctttgttgcacgatttctcgagagttg 16529  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||||||||||||||||||||||||| ||||||| |||||||||||    
T  16528 aacgcttgggtaggattaagacttaataatgaggttaactataatctgtg 16479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 178; Significance: 6e-96; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 52028 - 51779
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||  |||||||| ||||||    
T  52028 cctttgatgcctttgagtgcctgaacaagtctaataatgattaggaaagaatgtaggacgagattgaacctggaatgaaacttacgggattctaacctga 51929  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||| |||    
T  51928 gctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacttttgttgcacgagttgtcgagaattg 51829  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
     ||||||||||||||||||||||||| | | ||||||| |||||||||||    
T  51828 gacccttgggtaggattaagacttaagagtgaggttaactataatctgtg 51779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 13661 - 13411
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctg 100  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||    
T  13661 tccttatatgcttttgagtgcctgaaaatgtctaataatgattaggaaagaatgtaggatgagactgaacctggaatgaaacttgtggcattctgacctg 13562  T
Q  101 aactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagtt 200  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| | ||||||||| ||||    
T  13561 aactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaatcagagtgccttgttagattttgcgacctttgttgcacgagttgtcgacagtt 13462  T
Q  201 gaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||||| | || ||| ||||||||||||| || | |||||||||||| ||||    
T  13461 gaaccttgggatagcattaagacttaatgatgatgttaattataatttgtg 13411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 47435 - 47210
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47435 ccttagatgcttttgagtgtctgaatatgtctaataatgattaggaatgaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 47336  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
     |||||||||| | ||||||||||||||||||||||||||||| || |||||||||||||||||  | |||||||||||||| | |||||||||||||||    
T  47335 gctcgccacggagcgcagaggctctcgcctcgcgagtgacccaaaaccagagtgacttgttagaaatggcgacctttgttgcacgagttgtcgagagttg 47236  T
Q  202 aacccttgggtaggattaagacttaa 227  Q
    ||||||||||||||||||||||||||    
T  47235 aacccttgggtaggattaagacttaa 47210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 166; Significance: 8e-89; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 3930 - 3681
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||  |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3930 ccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctggaatgaaacttgtgggattctgacctga 3831  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||| |||||||||||||||||| |||||||||||||| ||||||||||| ||||| ||| |||| |||||||||||| | |||||| ||||||||    
T  3830 actcgccatggcgagcagaggctctcgtctcgcgagtgacccggaaacagagtgccttgtgagactttgtgacctttgttgcacgagttgttgagagttg 3731  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||| |||||||| ||||||||||||| |  ||| |||||||||||||||    
T  3730 aacctttgggtagtattaagacttaatgaagaggctaattataatctgtg 3681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 7994 - 7745
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||  |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7994 ccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctggaatgaaacttgtgggattctgacctga 7895  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||| |||||||||||||||||| |||||||||||||| ||||||||||| ||||| ||| |||| |||||||||||| | |||||| ||||||||    
T  7894 actcgccatggcgagcagaggctctcgtctcgcgagtgacccggaaacagagtgccttgtgagactttgtgacctttgttgcacgagttgttgagagttg 7795  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||| |||||||| ||||||||||||| |  ||| |||||||||||||||    
T  7794 aacctttgggtagtattaagacttaatgaagaggctaattataatctgtg 7745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 27305 - 27375
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||  | |||  |||||||||||||||    
T  27305 ttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctgg 27375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 20864 - 20603
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           | |||||||||||    
T  20864 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattatagaatgaaacttgtggg 20765  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||| | |||    
T  20764 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacctagaaacagagtgccttgttagattttgcgacctttgttgcacgagt 20665  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||||||||||||| | |  ||| ||||||||||||| || | ||||| |||||||||||    
T  20664 tgtcgagagttgaaccttggaatagcattaagacttaatgatgatgttaactataatctgtg 20603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 1363 - 1114
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  1363 ccttagatgcctttgagtgcctgaacattactaataatgattaggaaagaatgtaggatgagattgaacctggaatgaaacttgtgggattctgaccaga 1264  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||| |||||||||||||||||||||| |||||||||| |||||| |||| ||||| ||| ||||||||||||||||| | |||||| ||||||||    
T  1263 actcgccatggcgagcagaggctctcgcctcacgagtgacccggaaacaaagtgccttgtgagactttgcgacctttgttgcacgagttgttgagagttg 1164  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||  |||||||| ||||||||||||| |  ||| |||||||||||||||    
T  1163 aacttttgggtagtattaagacttaatgaagaggctaattataatctgtg 1114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 39220 - 38960
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||          | |||||||||| |    
T  39220 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttgaatgaaacttgtgg-a 39122  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||| | |||    
T  39121 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacatagtgacttgttaggtttttgcgacctttgttgcacgagt 39022  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||||||||||| | |||||| ||||||||||||| || | |||||||||||||||||    
T  39021 tgttgagagttgaaccttggggtagtattaagacttaatgatgatgttaattataatctgtg 38960  T

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Target: scaffold0021 (Bit Score: 158; Significance: 5e-84; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 125043 - 124785
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||           | |||||||||||    
T  125043 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgag---gaacctggaaagattgtagaatgaaacttgtggg 124947  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| | |||    
T  124946 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaaaagagtgtcttgttagattttgcgacctttgttgcacgagt 124847  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||||||||||||| | || ||| ||||||||||||| |  | |||||||||||||||||    
T  124846 tgtcgagagttgaaccttgggatagcattaagacttaatgaggatgttaattataatctgtg 124785  T

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Target: scaffold0021; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 63022 - 62947
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  63022 tccttagatgtttttgagtgcatgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 62947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 136132 - 136173
Alignment:
Q  97 cctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||||||||  ||||| |||||||||||||||||||||    
T  136132 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 136173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 144840 - 144881
Alignment:
Q  97 cctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||||||||  ||||| |||||||||||||||||||||    
T  144840 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 144881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 154; Significance: 1e-81; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 51544 - 51779
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||           | |||||||||||    
T  51544 tccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaaagattgtcgaatgaaacttgtggg 51643  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    ||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  51644 attttgacctgaactcgccacggcgagcagaggctctcacctcgctagtgacccagaaacagagtgacttgttagattttgcgacctttgttgcacgagt 51743  T
Q  190 tgtcgagagttgaacccttgggtaggattaagactt 225  Q
    |||||||||||||||| | |||||| ||||||||||    
T  51744 tgtcgagagttgaaccttggggtagcattaagactt 51779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 32994 - 32921
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||| || ||||||||||||||||| ||||||||||||||||||| | |||  ||||||||||| ||||||    
T  32994 ttagatgattctgagtgcctgaacatgtgtaataatgattaggaaagattctagattgagattgaacttggaat 32921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 32892 - 32826
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt 162  Q
    |||||||||||||| |||||| |||||| |||||||||||||  ||||||  ||||| || ||||||    
T  32892 acctgaactcgccatggcgagtagaggccctcgcctcgcgagctacccagttacagaatgccttgtt 32826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 153; Significance: 5e-81; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 4 - 248
Target Start/End: Complemental strand, 1733 - 1489
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctgaac 103  Q
    ||||||||||||| |||||||||||||||||||| |||||||  || |  |||||| | |||||||||||||||||||||| ||| ||||| | ||||||    
T  1733 ttagatgcttttgcgtgcctgaacatgtctaatattgattagtgaatagggtaggacgtgattgaacctggaattaaacttatggaattctaaactgaac 1634  T
Q  104 tcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttgaa 203  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||| | ||||||||||||||| |    
T  1633 tcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgttggagtttgcgacctttgttgcacgagttgtcgagagttgga 1534  T
Q  204 cccttgggtaggattaagacttaataataaggttaattataatct 248  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||    
T  1533 cccttgggtaggattaagacttaagaatgaggttaactataatct 1489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 4 - 248
Target Start/End: Complemental strand, 7710 - 7466
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctgaac 103  Q
    ||||||||||||| |||||||||||||||||||| |||||||  || |  |||||| | |||||||||||||||||||||| ||| ||||| | ||||||    
T  7710 ttagatgcttttgcgtgcctgaacatgtctaatattgattagtgaatagggtaggacgtgattgaacctggaattaaacttatggaattctaaactgaac 7611  T
Q  104 tcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttgaa 203  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||| | ||||||||||||||| |    
T  7610 tcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgttggagtttgcgacctttgttgcacgagttgtcgagagttgga 7511  T
Q  204 cccttgggtaggattaagacttaataataaggttaattataatct 248  Q
    |||||||||||||||||||||||| ||| ||||||| ||||||||    
T  7510 cccttgggtaggattaagacttaagaatgaggttaactataatct 7466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 150; Significance: 3e-79; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 4 - 248
Target Start/End: Complemental strand, 3928 - 3673
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatta-----------aacttgtgggatt 92  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |           |||||||||||||    
T  3928 ttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatgattgtagaatcaaacttgtgggatt 3829  T
Q  93 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgt 192  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||| | ||||||    
T  3828 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgagttgttaggttttgcgacctttgttgcacgagttgt 3729  T
Q  193 cgagagttgaacccttgggtaggattaagacttaataataaggttaattataatct 248  Q
     |||| ||||||  | |||||| ||||||||||||| |  | ||||||||||||||    
T  3728 tgagaattgaactttggggtagtattaagacttaatgaggatgttaattataatct 3673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 803 - 547
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||           | |||||| |||     
T  803 tccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctagaaagaatttagaatgaaacttttgga 704  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaag 188  Q
    || |||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||| |||||||||||   ||    
T  703 at-ctgaactgaactcgccgcggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtttttgcaacctttgttgcatgag 605  T
Q  189 ttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataat 246  Q
    |||| |||||||||||| | |||||| ||| ||||||||| |  | ||||||||||||    
T  604 ttgttgagagttgaaccttggggtagtattgagacttaatgaggatgttaattataat 547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 150; Significance: 3e-79; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 23962 - 24222
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||          | ||||||||||||    
T  23962 tccttagattcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaaattgtagaatgaaacttgtggga 24061  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagtt 190  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| | ||||    
T  24062 ttctgacctgaactcgccacagcgagcagaggctctcgcctcgcgagtgacctagaaacaaagtgccttgttagattttgcgacctttgttgcacgagtt 24161  T
Q  191 gtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||||||||||||||  | || ||| ||||||||||| | |  | |||||||||||||||||    
T  24162 gtcgagagttgaactttgggatagtattaagacttattgaggatgttaattataatctgtg 24222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 64201 - 64150
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  64201 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 64150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 148; Significance: 4e-78; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 13553 - 13292
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaattaaacttgtggg 89  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||           |||| |||||||||||    
T  13553 tccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatgtaggatgagattgaatctgaaaagattgtagaatgaaacttgtggg 13454  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| | |||    
T  13453 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaactgagtgtcttgttaggttttgcgacctttgttgcacgagt 13354  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||||||||||  | |||||| |||  |||||||| |  | |||||||||||||||||    
T  13353 tgttgagagttgaactttggggtagtattgggacttaatgaagatgttaattataatctgtg 13292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 34580 - 34437
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtgggat 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          |||| ||| ||  | ||     
T  34580 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttggagaa 34481  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcga 136  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||    
T  34480 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcga 34437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 148; Significance: 4e-78; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 2312 - 2051
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           | |||||||||||    
T  2312 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtggg 2213  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||| |||||| ||||||| ||||||| ||||||||||  |||||||||| |||||||||||||| |||||||||||| | |||    
T  2212 attctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccctaaaacagagtgccttgttagattttgtgacctttgttgcacgagt 2113  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||||||||||||| | || ||| ||||||||||||| |  | |||||||||||||||||    
T  2112 tgtcgagagttgaaccttgggatagtattaagacttaatgaggatgttaattataatctgtg 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 207180 - 207324
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtgggat 91  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||          |||| ||||||  | ||     
T  207180 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggagagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaa 207279  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  207280 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 207324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 119214 - 119255
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattag 45  Q
    ||||||| ||||||||||||||| |||| |||||||||||||    
T  119214 ttagatgattttgagtgcctgaatatgtataataatgattag 119255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 2 - 228
Target Start/End: Complemental strand, 5297 - 5072
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  5297 ccttagatgcttttgagtgcatgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatgaaacttgtgaggttctgacctga 5198  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    ||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||| | |||||| |||  ||     
T  5197 actcgccacggcgagtagaggctcttgcctcgcgagtgacctagaaacagagtgacttgttag-ttttgccacctttgttgcacgagttgttgaggatta 5099  T
Q  202 aacccttgggtaggattaagacttaat 228  Q
    |||| |||| ||| | |||||||||||    
T  5098 aacctttggctagcaataagacttaat 5072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 5781 - 6036
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg-----------aattaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||           ||| ||| ||| |||    
T  5781 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtaggatgagattgaacctgggaagattattgaatgaaatttgcggg 5880  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||| | |||    
T  5881 attctgacctgaacttgccacggcgagcagaggctctcgcctcgttagtgacccagaaacagagtgccttgttagattttgcgacctttgttgcacgagt 5980  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataa 245  Q
    | |||||||| ||||| | || ||| ||||||||||||| || | |||||||||||    
T  5981 tatcgagagtggaaccttgggatagcattaagacttaatgatgatgttaattataa 6036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 142; Significance: 2e-74; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 16875 - 17135
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtggga 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||          | |||||| ||| |    
T  16875 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaacttttggaa 16974  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||| ||| |||||||||||||||||||| | |||    
T  16975 ttctgacctgaactcgccacggagagcagaggctctcgcctcgcgagtgacccagaaacagagtaccttattaggattttgcgacctttgttgcacgagt 17074  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgt 250  Q
    ||| ||||||| |||| | |||||| ||| ||||||||| || | ||||||||||||||||    
T  17075 tgttgagagttaaaccttggggtagtattgagacttaatcatgatgttaattataatctgt 17135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 79023 - 79096
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgga 75  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| |||||||| |||||||||||||||||    
T  79023 ccttagatgcttttgagtgcatgaacatgtttaataatgattaggaaggaatgtagaatgagattgaacctgga 79096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 8936 - 8675
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatta-----------aacttgtggg 89  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||  |           ||||||||||    
T  8936 tccttagatgcttttgagtgcctgaatatgtctaatagtgattaggaaagaatgtaggatgagattgaacctagaaagattgtaaaatggaacttgtggg 8837  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||| | |||    
T  8836 attctgacctgaactcgccacggccagtagaggctctcgcctcgcgaatgacccagaaacagagtgtcttgttaggttttgcgacctttgttgcacgagt 8737  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||||||||||| | | |||| ||||||||||||| || | |||||||| ||||||||    
T  8736 tgttgagagttgaaccttggagtagtattaagacttaatgatgatgttaattacaatctgtg 8675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 128; Significance: 4e-66; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 25725 - 25983
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatta----------aacttgtggga 90  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |          || || ||| |    
T  25725 tccttagatggttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgaaaagattgtagaatgaatttttggaa 25824  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | |||    
T  25825 atctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagt 25924  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatct 248  Q
    ||   |||| |||||| | |||||| ||| ||||||||| || | ||||||||||||||    
T  25925 tgctaagagctgaaccttggggtagtattgagacttaatgatgatgttaattataatct 25983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 33154 - 33410
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||           | |||||| |||     
T  33154 tccttagatgcttctgagtgcctggacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattttagaatgaaacttttgga 33253  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaag 188  Q
    | ||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||| | |||||||||| || |||    ||||    
T  33254 agtcttacctgaactcgccacggcgagcaaaggctctcgcctcgcgtgtgacccagaaacagagtgccttgtcaggattttgcgatctgtgtcatacaag 33353  T
Q  189 ttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataa 245  Q
    ||||  ||||||||||| | |||||| ||| ||||||||| || | |||||||||||    
T  33354 ttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataa 33410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 128; Significance: 4e-66; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 40372 - 40112
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg---gaat------taaacttgtgggat 91  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||   || |      | ||||| ||| |     
T  40372 tccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaggaatgtaggatgagattgaacctgacagattgtagaatgaacttttggaaa 40273  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagat-tttgcgacctttgttgctcaagtt 190  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||| | ||||||||||||||||| | ||||    
T  40272 tctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtaccttgttaggtgtttgcgacctttgttgcacgagtt 40173  T
Q  191 gtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    || |||||||||||| | |||||| ||| ||||||||| || | |||||||||||||||||    
T  40172 gttgagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtg 40112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 18413 - 18464
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  18413 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 18464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 21350 - 21111
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||          |||||    
T  21350 ccttagatgttttttagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgtacctggaatgaaacttgt----------cctga 21261  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcgagagttg 201  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||   |||||||||||||||||| | |||||   |||||||    
T  21260 actcgccacggcgagcagaggctctcgcctcgtgagtgacccaaaaacagagtgacttgttgagttttgcgacctttgttgcacgagttgatcagagttg 21161  T
Q  202 aacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||| |||||||| ||||||||||||| |  | ||||||||||| |||||    
T  21160 aacctttgggtagtattaagacttaatgaagatgttaattataacctgtg 21111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 339611 - 339871
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatta----------aacttgtggga 90  Q
    |||||| |||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||  |          ||||| |||||    
T  339611 tccttaaatgcttttgagtgcctgaatttgtctaataatgattaggaatgaatgtaggatgagattgaacctggaaagattgtagaatgaacttttggga 339710  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagtt 190  Q
     |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||| | |||     
T  339711 atctgacatgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaatagagtgccttgttaggttttgcgacctttgttgcacgagtc 339810  T
Q  191 gtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||  || |||||||| | |||||| ||| ||||||||| || | |||||||||||||||||    
T  339811 gttaagggttgaaccttggggtagtattgagacttaatgatgacgttaattataatctgtg 339871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 119; Significance: 9e-61; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 7 - 204
Target Start/End: Original strand, 8198 - 8406
Alignment:
Q  7 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtgggattctg 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           | |||||| ||| ||||||    
T  8198 gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaatgaaacttttggaattctg 8297  T
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagttgtcga 195  Q
     ||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||| | |||||| ||    
T  8298 gcctaaactcgccacggtgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggttttgcgaccttcgttgcacgagttgttga 8397  T
Q  196 gagttgaac 204  Q
    |||||||||    
T  8398 gagttgaac 8406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 117; Significance: 1e-59; HSPs: 7)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 5 - 251
Target Start/End: Complemental strand, 40313 - 40057
Alignment:
Q  5 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtgggattc 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||           | |||||| |||  |||    
T  40313 tagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatggaggatgagattgaacctggaaagattgtagaatgaaacttttggt-ttc 40215  T
Q  94 tgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagttgt 192  Q
    | ||||| |||||||||||||||||||||||||||||||||| |||||| |||||| ||||| ||||||| |||||||||||||||||||| ||| ||||    
T  40214 taacctgtactcgccacggcgagcagaggctctcgcctcgcgggtgacctagaaaccgagtgccttgttatgattttgcgacctttgttgcacaatttgt 40115  T
Q  193 cgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
     |||||||||| |||||||||| ||| ||||||||| |  | |||||||||||| ||||    
T  40114 tgagagttgaa-ccttgggtagcattgagacttaatgaggatgttaattataatttgtg 40057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 39591 - 39666
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  39591 tccttagatgcttttgagtacctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacctggaa 39666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 26213 - 26095
Alignment:
Q  134 cgagtgacccagaaacagagtgacttgttag-attttgcgacctttgttgctcaagttgtcgagagttgaacccttgggtaggattaagacttaataata 232  Q
    ||||||||||||||||  |||| |||||||| ||||||||||||||||||| | | |||| |||||||||||| | |||||| ||| ||||||||| |      
T  26213 cgagtgacccagaaaccaagtgccttgttaggattttgcgacctttgttgcacgatttgttgagagttgaaccttggggtagcattgagacttaatgagg 26114  T
Q  233 aggttaattataatctgtg 251  Q
    | |||||||||||||||||    
T  26113 atgttaattataatctgtg 26095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 59179 - 59235
Alignment:
Q  17 agtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  59179 agtgcctgaacatgtctaataatgattaggacagaatgtagaatgagattgaacctg 59235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 26662 - 26611
Alignment:
Q  25 aacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26662 aacatgtctaataatgattaggaaagaatgtaggatgagattaaacctggaa 26611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 59271 - 59308
Alignment:
Q  100 gaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| |||||||||||||||||||||||||||    
T  59271 gaactcgccatggcgagcagaggctctcgcctcgcgag 59308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 122
Target Start/End: Complemental strand, 26589 - 26555
Alignment:
Q  88 ggattctgacctgaactcgccacggcgagcagagg 122  Q
    ||||||||||||||| |||||||||||||||||||    
T  26589 ggattctgacctgaagtcgccacggcgagcagagg 26555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 114; Significance: 9e-58; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 23343 - 23082
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat-----taaacttg-----tggga 90  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||      || | |||     ||| |    
T  23343 tccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggatctggaaagattgtagaattgaattttggaa 23244  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
    |||||| |||| |||||||| |||||||||||| |||||||||||||||||| |||||||||||| ||||||| | |||||||||||||||||| | |||    
T  23243 ttctgaactgagctcgccacagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgtcttgttaggtttttgcgacctttgttgcacgagt 23144  T
Q  190 tgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||| |||||||||||| | |||||| ||| ||||||||| || | |||| ||||||||||||    
T  23143 tgttgagagttgaaccttggggtagtattgagacttaatgatgatgttatttataatctgtg 23082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 111; Significance: 5e-56; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 4969 - 4707
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa------------ttaaacttgtgg 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||            | |||||| |||    
T  4969 tccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactt-tgg 4871  T
Q  89 gattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaa 187  Q
    || |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||  || |||| |||||||||| |  ||| || |||    
T  4870 gaatctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggattttgcgatcagtgtcgcacaa 4771  T
Q  188 gttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||  ||||||||||| | |||||| ||| ||||||||| || | |||||||||||||||||    
T  4770 gttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtg 4707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 12551 - 12289
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa------------ttaaacttgtgg 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||            | |||||| |||    
T  12551 tccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactt-tgg 12453  T
Q  89 gattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaa 187  Q
    || |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||  || |||| |||||||||| |  ||| || |||    
T  12452 gaatctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggattttgcgatcagtgtcgcacaa 12353  T
Q  188 gttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||  ||||||||||| | |||||| ||| ||||||||| || | |||||||||||||||||    
T  12352 gttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtg 12289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 22503 - 22241
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa------------ttaaacttgtgg 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||            | |||||| |||    
T  22503 tccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacctggaaagatttttagaatgaaactt-tgg 22405  T
Q  89 gattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaa 187  Q
    || |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||  || |||| |||||||||| |  ||| || |||    
T  22404 gaatctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggattttgcgatcagtgtcgcacaa 22305  T
Q  188 gttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    |||||  ||||||||||| | |||||| ||| ||||||||| || | |||||||||||||||||    
T  22304 gttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataatctgtg 22241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 109; Significance: 8e-55; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 16259 - 16521
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----------ttaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||           | |||| | |||     
T  16259 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagaatgagattgaacctggaaagattttcgaatgaaacgtttgga 16358  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt-agattttgcgacctttgttgctcaag 188  Q
    | ||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||  |||||||||| || ||| || ||||    
T  16359 aatctaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgccttgttgggattttgcgatctgtgtcgcacaag 16458  T
Q  189 ttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||||   |||||||||| | |||||| ||| ||||||||| || | |||||||||| ||||||    
T  16459 ttgttaggagttgaaccttggggtagtattgagacttaatgatgatgttaattatagtctgtg 16521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 365 - 163
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtggga 90  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||| |||||| | |      
T  365 tccttatatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatttagaatgaaactttttgag 266  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagt 189  Q
    |||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||| || ||| || |||||    
T  265 ttctgacctgaactcgccacagcgagtagaggctctcgccacgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagt 166  T
Q  190 tgt 192  Q
    |||    
T  165 tgt 163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 2 - 251
Target Start/End: Original strand, 17669 - 17908
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaattaaacttgtggga 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           |||| ||||||||||||    
T  17669 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggatagattgtagaatgaaacttgtggga 17768  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagattttgcgacctttgttgctcaagtt 190  Q
    |||||||||||||||||||||||                     |||| ||||||||| ||||||||||||||| |||||||||||||||||| | ||||    
T  17769 ttctgacctgaactcgccacggc---------------------gagtcacccagaaatagagtgacttgttaggttttgcgacctttgttgcacgagtt 17847  T
Q  191 gtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    || |||| ||||||| |||||||| ||||||||||||| |  | |||||||||||||||||    
T  17848 gttgagaattgaacctttgggtagtattaagacttaatgaggatgttaattataatctgtg 17908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 622 - 861
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttg-tggg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||          |||| ||||||| |||     
T  622 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtagaacgagattgaacctggtttagtagagaatgaaacttgttgga 721  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaag 188  Q
    | |||||||||||||||||| |||||||||||| || ||||||| |||||||| |||||||||| | ||||||| |||||| ||||||||||||| | ||    
T  722 aatctgacctgaactcgccatggcgagcagaggttcccgcctcgtgagtgacctagaaacagagagtcttgttaggatttttcgacctttgttgcacgag 821  T
Q  189 ttgtcgagagttgaacccttgggtaggattaagacttaat 228  Q
     ||| |||||||||||| |  ||||| ||| |||||||||    
T  822 ctgttgagagttgaaccttgaggtagtattgagacttaat 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 13269 - 13383
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaattaaacttgtgggattctgacctga 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||| |||||||||    
T  13269 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgagcctgaaatgaaacttgtgggatcctgacctga 13368  T
Q  102 actcgccacggcgag 116  Q
    ||| ||| |||||||    
T  13369 acttgccccggcgag 13383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 91; Significance: 5e-44; HSPs: 4)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 10 - 205
Target Start/End: Complemental strand, 16539 - 16333
Alignment:
Q  10 gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----ttaaacttg-----tgggattctgacct 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      || | |||     ||| ||||||| ||    
T  16539 gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctggaaagattgtagaattgaattttggaattctgaact 16440  T
Q  100 gaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagttgtcgagag 198  Q
    || ||||||||||||| ||||||| ||| |||||| |||||||||||||||||| | ||||||| | |||||||||||||||||| | |||||| |||||    
T  16439 gagctcgccacggcgatcagaggccctcacctcgcaagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagag 16340  T
Q  199 ttgaacc 205  Q
    |||||||    
T  16339 ttgaacc 16333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 32620 - 32843
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----tta-----aacttgtgggat 91  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| || || || ||||||||||||||| ||     |||     || || || ||     
T  32620 ccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctgtaaagattttagaatgaatttttgtgag 32719  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 190  Q
    |   |||  |||||||||| ||||| |||||||| |||||||||||||||||| ||||||| || ||||||| |||||||||| || ||| || | | ||    
T  32720 ttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgttaggattttgcgatctgtgtcgcaccaatt 32819  T
Q  191 gtcgagagttgaacccttgggtag 214  Q
    ||  ||||||||||| | ||||||    
T  32820 gttaagagttgaaccttggggtag 32843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 46385 - 46314
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| || || || |||||||||||||||    
T  46385 ccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacctg 46314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 214
Target Start/End: Complemental strand, 46276 - 46162
Alignment:
Q  101 aactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagttgtcgagagt 199  Q
    |||||||||| ||||| |||||||| |||||||||||||||||| ||||||| || ||||||| |||||||||| || ||| || | | ||||  |||||    
T  46276 aactcgccacagcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgttaggattttgcgatctgtgtcgcaccaattgttaagagt 46177  T
Q  200 tgaacccttgggtag 214  Q
    |||||| | ||||||    
T  46176 tgaaccttggggtag 46162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 92 - 248
Target Start/End: Complemental strand, 39836 - 39679
Alignment:
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||| || ||| || ||||||    
T  39836 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtcaggattttgcgatctgtgtcgcacaagtt 39737  T
Q  191 gtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatct 248  Q
    ||  || |||||||| | |||||| ||| |||||||||||| | ||||||||||||||    
T  39736 gttaagggttgaaccttggggtagtattgagacttaataatgatgttaattataatct 39679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 92 - 248
Target Start/End: Original strand, 74976 - 75133
Alignment:
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||| || ||| || ||||||    
T  74976 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtcaggattttgcgatctgtgtcgcacaagtt 75075  T
Q  191 gtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatct 248  Q
    ||  || |||||||| | |||||| ||| |||||||||||| | ||||||||||||||    
T  75076 gttaagggttgaaccttggggtagtattgagacttaataatgatgttaattataatct 75133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 673 - 837
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgga----------attaaacttgtggga 90  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |          | | ||||| ||| |    
T  673 tccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaatctgaaaagattgtagaatgaacttttggaa 772  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtg 155  Q
     ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  773 atctgacctgaactcgccacggtgagcggaggctctcgcctcgcgagtgacccagaaacagagtg 837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 251
Target Start/End: Original strand, 2987 - 3072
Alignment:
Q  166 ttttgcgacctttgttgctcaagttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||||||||||| |||||| | |||||| |||||||||||| | |||||| ||| ||||||||| || | ||||||||||| |||||    
T  2987 ttttgcgacctgtgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgttaattataacctgtg 3072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 90 - 251
Target Start/End: Complemental strand, 28192 - 28030
Alignment:
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaag 188  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | |||||||| | || ||| || ||||    
T  28192 attctgacctgaactcgccacggcgagcaaaggctctcgcctcgcgagtgacccagaaacagagtgccttgtcaggattttgcaatctgtgtcgcacaag 28093  T
Q  189 ttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||||  ||||||||||| | |||||| ||| ||||||||| || | ||||||||||| |||||    
T  28092 ttgttaagagttgaaccttggggtagtattgagacttaatgatgatgttaattataacctgtg 28030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28997 - 28924
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28997 tccttagatgcttttgagttcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgg 28924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 20573 - 20426
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtggga 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||          |||| |||||| |||      
T  20573 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaataagattgaacctggaaagatttagaatgaaacttttggag 20474  T
Q  91 ttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  20473 ttctgacctgagctcgccacgacgagcagaggctctcgcctcgcgagt 20426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 79; Significance: 7e-37; HSPs: 3)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 17241 - 17090
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaattaaacttgtggg 89  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||           |||| |||||| || |    
T  17241 tccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctggatagattttagaataaaactt-tgag 17143  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacc 142  Q
    | | |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17142 aatatgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacc 17090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 7471 - 7506
Alignment:
Q  41 attaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||||||||||||||||||||||||||||||    
T  7471 attaggaaagaatgtaggatgagattgaacctggaa 7506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 137
Target Start/End: Original strand, 7537 - 7576
Alignment:
Q  98 ctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  7537 ctgaactcgccatggcaagcagaggctctcgcctcgcgag 7576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 90 - 251
Target Start/End: Complemental strand, 10525 - 10363
Alignment:
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaag 188  Q
    ||||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||| |||| ||||||| |||||||||| || ||| || ||||    
T  10525 attctgacctgaactcgccacggcgagcagagcttcccgcctcgcgagtgacctagaaacaaagtgccttgttaggattttgcgatctgtgtcgcacaag 10426  T
Q  189 ttgtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||||  ||||||||||| | |||||| ||| |||||||||||| | |||||| ||||||||||    
T  10425 ttgttaagagttgaaccttggggtagtattgagacttaataatgatgttaataataatctgtg 10363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10619 - 10566
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatg 54  Q
    ||||||||||||||||||||||| |||||| ||| || ||||||||||||||||    
T  10619 tccttagatgcttttgagtgccttaacatgcctagtagtgattaggaaagaatg 10566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 1738 - 1891
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaattaaacttgtggg 89  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||           |||| |||||| |||     
T  1738 tccttagatg-ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagattttagaatgaaactt-tgga 1835  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 145  Q
    | ||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  1836 aatctgacctgaattcgccatggcgagcagaggctctcgcctcgcgagtgacccag 1891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 18618 - 18693
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18618 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 18693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 2746 - 2820
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2746 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 2820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 15275 - 15426
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg-----------gaattaaacttgtggg 89  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||| |||           |||| |||||| ||||    
T  15275 tccttagatgcttttgagtgcctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaatctggatagattttagaatgaaactt-tggg 15373  T
Q  90 attctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacc 142  Q
    | ||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  15374 aatctgacctgaactcgccatagcgagcagaggctctcgcctcgcgagtgacc 15426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 13102 - 13033
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    ||||||| |||||||||||||| ||||| || ||||||||||| |||  | |||  ||||||||||||||    
T  13102 ttagatgattttgagtgcctgaccatgtatattaatgattaggcaagtttttagattgagattgaacctg 13033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 2106 - 2250
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtgggat 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          |||| ||| ||  | ||     
T  2106 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagacttagaatgaaaatttagagaa 2205  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||    
T  2206 tctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 2250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 12470 - 12611
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg----------gaattaaacttgtgggat 91  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||          |||| ||||||  | ||     
T  12470 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacatagaatgaaactttggagaa 12569  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgc 134  Q
    ||||| |||||||||||| ||||||||||||||||||||||||    
T  12570 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgc 12611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 28941 - 29011
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28941 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacct 29011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 67; Significance: 1e-29; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 7955 - 8029
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7955 ccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa 8029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 53134 - 53204
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    ||||||| ||||||||||||||||| || |||||||||||||| |||  | |||  |||||||||||||||    
T  53134 ttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgg 53204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 8062 - 8099
Alignment:
Q  100 gaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| |||||||||||||||||||||||||||    
T  8062 gaactcgccatggcgagcagaggctctcgcctcgcgag 8099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 12389 - 12243
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg---aatta------aacttgtgggat 91  Q
    |||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||| ||||||||||||||||   |||||      ||||| | |||     
T  12389 tccttagatgcttttgagtgtctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaacctggattaattaagaatgaactttttggaa 12290  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
     ||||||||||||||||| |||||| |||||||||| ||||||||||    
T  12289 actgacctgaactcgccatggcgagtagaggctctcacctcgcgagt 12243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 20086 - 20228
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg---aatta------aacttgtgggat 91  Q
    ||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||   |||||      ||||| | |||     
T  20086 tccttagatgcttttgagttcctgaacatgtttaataatgagtaggaaagaatgtagaatgagattgaacctggattaattaagaatgaactttttggaa 20185  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgc 134  Q
     ||||||||||||||||| |||||| |||||||||||||||||    
T  20186 gctgacctgaactcgccatggcgagtagaggctctcgcctcgc 20228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16119 - 16047
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  16119 tccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagaatgagattgaacctg 16047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 16011 - 15974
Alignment:
Q  100 gaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| |||||||||||||||||||||||||||    
T  16011 gaactcgccatggcgagcagaggctctcgcctcgcgag 15974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 137
Target Start/End: Complemental strand, 476 - 344
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatta----------aacttgtgggattctgacctgaac 103  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||          |||||  | || ||||| ||||||    
T  476 ttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaatacttagaatggaactttggagaatctga-ctgaac 378  T
Q  104 tcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||| |||||||||||||||||||||||||||    
T  377 tcgccatggcgagcagaggctctcgcctcgcgag 344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 10370 - 10226
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----tt------aaacttgtgggat 91  Q
    |||||||||| ||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||    ||      ||||||  | ||     
T  10370 ccttagatgcctttgagtgcctaaacatgtctattattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaaggaaactttggagaa 10271  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||    
T  10270 tctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 10226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10605 - 10540
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagatt 66  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10605 tccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtaggatgagatt 10540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 251
Target Start/End: Complemental strand, 4983 - 4723
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----tta-----aacttgtgggat 91  Q
    |||||||||||||||||||||| |||||||||| |||||| |||| |||| ||||| ||||||||||||||| ||     |||     ||||| ||        
T  4983 ccttagatgcttttgagtgcctaaacatgtctattaatgactagggaagattgtagaatgagattgaacctgaaaagattttagaatgaacttttgtcga 4884  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgacctttgttgctcaagtt 190  Q
    || ||||||  ||||||| |||||||| ||||||||||||||| ||  ||||||||||||| || | ||||| |||||||||||||||||||| | ||||    
T  4883 tcagacctgtcctcgccatggcgagcaaaggctctcgcctcgcaagctacccagaaacagaatgccatgttaggattttgcgacctttgttgcacgagtt 4784  T
Q  191 gtcgagagttgaacccttgggtaggattaagacttaataataaggttaattataatctgtg 251  Q
    ||  ||||||||||| |  ||||| ||| ||||||| | |  | |||||||||||| ||||    
T  4783 gttaagagttgaaccttgaggtagtattgagacttattgaagatgttaattataatttgtg 4723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Complemental strand, 10251 - 10200
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  10251 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 10200  T

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Target: scaffold0556 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 7272 - 7197
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  7272 tccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 7197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 8476 - 8401
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||| ||| ||||| ||| ||||| |||| ||||||||||||| ||||| | |||  ||||||||||||||||||    
T  8476 ccttaaatgtttttgggtgtctgaatatgtgtaataatgattagaaaagattctagattgagattgaacctggaat 8401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 7167 - 7126
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||| |||||| |||||||||||||| |||||    
T  7167 acctgaactcgccatggcgagtagaggctctcgccttgcgag 7126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 28469 - 28540
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||    
T  28469 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacct 28540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 28574 - 28616
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  28574 acctgaactcgccatggcgagcagaggctctcgcctcgcgagt 28616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 32544 - 32469
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  32544 tccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 32469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 32439 - 32397
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||||||||| ||||||||||||||||| ||||||||||    
T  32439 acctgaactcgccatggcgagcagaggctctcacctcgcgagt 32397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 60; Significance: 1e-25; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 133114 - 133039
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||    
T  133114 tccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctggaa 133039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 133009 - 132967
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  133009 acctgaactcgccatggcgagcagaggctctcgcctcgcgagt 132967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Original strand, 58492 - 58527
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  58492 actcgccacggcgagcagatgctctcgcctcgcgag 58527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 41959 - 41901
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| | ||||||||    
T  41959 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcatattgaacc 41901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 57466 - 57408
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| || |||||||||| |||||||| || ||||||||||    
T  57466 tttgagtgcctgaacatacctagtattgattaggaatgaatgtagaatcagattgaacc 57408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 9495 - 9639
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtgggat 91  Q
    |||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||          | ||||||  | ||     
T  9495 ccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatctggaaagacttagaatgaaactttggagaa 9594  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||| |||||||| || |||||||||||||||||||||||||||    
T  9595 tctgac-tgaactcgtcatggcgagcagaggctctcgcctcgcgag 9639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 80005 - 80137
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtgggattctgacctgaac 103  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||          | ||||||  | || |||||| |||||    
T  80005 ttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaaagacttagaatgaaactttggagaatctgac-tgaac 80103  T
Q  104 tcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||| || |||||||||||||||||||||||||||    
T  80104 tcgacatggcgagcagaggctctcgcctcgcgag 80137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 59; Significance: 6e-25; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 161146 - 161072
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgga 75  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||    
T  161146 tccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctgga 161072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 447007 - 446965
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||    
T  447007 ttagatgattttgggtgcctgaacatgtataataatgattagg 446965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 497938 - 497896
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||    
T  497938 ttagatgattttgtgtgcctgaacatgtataataatgattagg 497896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6488 - 6557
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 70  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6488 tccttagatgccttttagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 6557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 161
Target Start/End: Original strand, 6561 - 6625
Alignment:
Q  97 cctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgt 161  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  6561 cctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaatagagtgccttgt 6625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 3393 - 3317
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||||||||||    
T  3393 tccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctggaat 3317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 19727 - 19652
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| || || || ||||||||||||||||||    
T  19727 tccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaggattggagaatgagattgaacctggaa 19652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 19622 - 19573
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccag 145  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  19622 acctgaactcgccatggcgagcagaggctctcgcctcgcgaatgacccag 19573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 9536 - 9462
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  |||||||| ||||||||    
T  9536 ccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaa 9462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 9432 - 9391
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  9432 acctgaactcgccatggcgagtagaggctctcgcctcgcgag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 24312 - 24456
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa----------ttaaacttgtgggat 91  Q
    ||||||||||  |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||          | ||||||  |  |     
T  24312 ccttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatttaggatgagattgaacctagaaagacttagaatgaaactttggataa 24411  T
Q  92 tctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||    
T  24412 tctgac-tgaactcgccatggcgagcagaggctctcgcctcgcgag 24456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 101855 - 101781
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgga 75  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||    
T  101855 tccttagaagtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctgga 101781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 101753 - 101709
Alignment:
Q  94 tgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||||||||||| |||||||||||||||| |||||| ||||    
T  101753 tgacctgaactcgccatggcgagcagaggctcttgcctcgggagt 101709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2463 - 2535
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 73  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| || || ||||| |||||||||    
T  2463 tccttagatgcttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagtttgaacctg 2535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 2567 - 2609
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  2567 acctgaactcgccatggcgagtagaggctctcgcctcgcgagt 2609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 580 - 437
Alignment:
Q  12 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa-----tta-----aacttgtgggattctgacctga 101  Q
    |||||||||||| ||||||||||||||||||||||||||| || || |||||||||||| |||||     |||     || || || || |   ||||||    
T  580 ttttgagtgcctaaacatgtctaataatgattaggaaagattggagaatgagattgaacttggaaagattttagaatgaatttttgtgagttgcacctga 481  T
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagtgacccag 145  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  480 actcgccatggcgagcagaggctctcgcctcgcgagtgacccag 437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 2304 - 2378
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgga 75  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||||||||    
T  2304 tccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctgga 2378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 45449 - 45522
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||| ||  | ||||||||||||||||    
T  45449 tccttagatgtttttgagtgcctgaatatgtctaataatgattaggaaagattggggaatgagattgaacctgg 45522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 45555 - 45596
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  45555 acctgaactcgccatggcgagtagaggctctcgcctcgcgag 45596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 6054 - 5978
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||| || ||  ||||||||||| ||||||    
T  6054 tccttagatgtttttgagtgcctgaacaggtctaataatgattaggaaagattggagattgagattgaacttggaat 5978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 13400 - 13325
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| || ||  | ||||||||||||||||    
T  13400 ccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaagattggagattaagattgaacctggaat 13325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 29892 - 29950
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  29892 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 29950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 41888 - 41946
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  41888 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 41946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 13296 - 13255
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||| |||||| |||||| |||||||||||||    
T  13296 acctgaactcgccatggcgagtagaggccctcgcctcgcgag 13255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 43445 - 43520
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||| | |||  ||||||||||||||||||    
T  43445 ccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaat 43520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 47365 - 47440
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||| | |||  ||||||||||||||||||    
T  47365 ccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaat 47440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 10987 - 10913
Alignment:
Q  3 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||   |||  ||||||||||||||||||    
T  10987 cttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctggaat 10913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 10884 - 10842
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    ||||||||||||||  ||||| |||||||||||||||||||||    
T  10884 acctgaactcgccatagcgagtagaggctctcgcctcgcgagt 10842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1961 - 2030
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 70  Q
    |||||||||| ||||||||  |||||||||||||||||||||||||||||| || || ||||||||||||    
T  1961 tccttagatgtttttgagtcactgaacatgtctaataatgattaggaaagattggagaatgagattgaac 2030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 2066 - 2108
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||||||||| ||| ||||||||||||||||||||||||    
T  2066 acctgaactcgccatggcaagcagaggctctcgcctcgcgagt 2108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 690 - 755
Alignment:
Q  3 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattga 68  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||  |||||||||    
T  690 cttagatgtttttgagtgcctgaacatgtataataatgattaggaaagattgtagattgagattga 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 12453 - 12380
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||| ||||||||| |||||||||| ||||||||||||||||||| | |||  ||||||||||||||||||    
T  12453 ttagatgattttgagtgtctgaacatgtataataatgattaggaaagattttagattgagattgaacctggaat 12380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 15491 - 15566
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| |||||||||||| ||||||| |||| |||||||||||||| | |||  ||||||||||||||||||    
T  15491 ccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattgagattgaacctggaat 15566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 6987 - 6922
Alignment:
Q  12 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||||||| |||||||||||||| ||||||||||| || ||  ||||||||||||||||||    
T  6987 ttttgagtgcctggacatgtctaataataattaggaaagattggagattgagattgaacctggaat 6922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 4)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 10229 - 10278
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaga 51  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  10229 ccttagatgtttttgagtgcctgaacatgtctaataatgattagtaaaga 10278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 1039 - 965
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    |||||||||  |||||||||  |||||||||||||| |||||||||  ||||||| |||||||| | ||||||||    
T  1039 ccttagatgtctttgagtgctagaacatgtctaatattgattaggagtgaatgtaagatgagataggacctggaa 965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 133
Target Start/End: Complemental strand, 944 - 897
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcg 133  Q
    |||||||||| ||||||||||||| |||||||||| | ||||||||||    
T  944 tgggattctgccctgaactcgccatggcgagcagatgttctcgcctcg 897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 10305 - 10347
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    ||||||||||||||  ||||| |||||||||||||||||||||    
T  10305 acctgaactcgccaaagcgagtagaggctctcgcctcgcgagt 10347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 227942 - 227877
Alignment:
Q  12 ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    |||||||||||| ||||||| ||||||||||||||||||| | |||  ||||||||||||||||||    
T  227942 ttttgagtgcctaaacatgtataataatgattaggaaagattctagattgagattgaacctggaat 227877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 5784 - 5852
Alignment:
Q  3 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||||| | |||||  ||||||||||||    
T  5784 cttagatgtttttgagtacctgaacatgtataataatgattaggaaaaattgtagattgagattgaacc 5852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 5)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 130368 - 130292
Alignment:
Q  1 tccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||| |||| ||||||||||||||||||||||| | |||||||| ||||| | |||  ||||||||||||||||||    
T  130368 tcctttgatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacctggaat 130292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 130263 - 130222
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  130263 acctaaactcgccatggcgagcagaggctctcgcctcgcgag 130222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 242479 - 242420
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| ||||||||||||| |||||||||   |||||||||||    
T  242479 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtagggcaagattgaacct 242420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 60301 - 60367
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 70  Q
    ||||||| || ||||||||||||||||| |||||||||||||| |||  | |||  |||||||||||    
T  60301 ttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaac 60367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 60479 - 60520
Alignment:
Q  97 cctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||||||||  ||||| |||||||||||||||||||||    
T  60479 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 60520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 7718 - 7793
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| ||||||||| |||||||||| |||||||||||||||||||   |||  ||||||||||||| ||||    
T  7718 ccttagatgtttttgagtgtctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctagaat 7793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 7822 - 7864
Alignment:
Q  96 acctgaactcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    ||||||||||||||  ||||| |||||||||||||||||||||    
T  7822 acctgaactcgccatagcgagtagaggctctcgcctcgcgagt 7864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 7073 - 6998
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| |||||||||||| ||||||| |||| |||||||||||||| | |||  | ||||||||||||||||    
T  7073 ccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctggaat 6998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 14453 - 14378
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||| |||||||||||| ||||||| |||| |||||||||||||| | |||  | ||||||||||||||||    
T  14453 ccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacctggaat 14378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 80796 - 80726
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    ||||||| |||||||||||||||||||| |||||||||||||| |||  | |||  |||||||||||||||    
T  80796 ttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 80726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 128735 - 128775
Alignment:
Q  97 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||||||  ||||| ||||||||||||||||||||    
T  128735 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 128775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 10933 - 10970
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataat 39  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10933 ccttagatgcttttgagtgcctgaacatgtctaataat 10970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 2313 - 2245
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 70  Q
    ||||||||| ||||||||||||||| |||   | |||||||||||||||| ||||| ||||||||||||    
T  2313 ccttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 2245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 58102 - 58161
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  58102 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 58161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 332850 - 332784
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 70  Q
    ||||||| ||||||||||||||| |||| ||| ||||||||||||||  | |||  |||||||||||    
T  332850 ttagatgattttgagtgcctgaatatgtataagaatgattaggaaagtttttagattgagattgaac 332784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 3560 - 3618
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| ||||||||||| | ||||||||||| ||||||||||    
T  3560 tttgagtgcctgaacatacctagtaatgattagggatgaatgtaggatcagattgaacc 3618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 10599 - 10541
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||||||||||    
T  10599 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 10541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 14224 - 14282
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||||||||||    
T  14224 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 14282  T

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Target: scaffold0109 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 27064 - 27006
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  27064 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 27006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 35531 - 35575
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||| ||| ||||||||||||||| |||| ||||||||||||||    
T  35531 ccttaaatgattttgagtgcctgaatatgtataataatgattagg 35575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 24182 - 24256
Alignment:
Q  3 cttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    |||||||| ||||||||||||||| || | |||||||||||||| |||  | |||  ||||||||||||||||||    
T  24182 cttagatgattttgagtgcctgaatatatataataatgattaggcaagcttttagattgagattgaacctggaat 24256  T

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Target: scaffold0029 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 125797 - 125855
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  125797 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 125855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Original strand, 61386 - 61421
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  61386 actcgccacggcgagcagatgctctcgcctcgcgag 61421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 137
Target Start/End: Original strand, 65304 - 65337
Alignment:
Q  104 tcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||| ||||||||||||||||    
T  65304 tcgccacggcgagcagatgctctcgcctcgcgag 65337  T

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Target: scaffold0029; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 105563 - 105620
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||| |||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  105563 ttgagtgcctaaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 105620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 9762 - 9704
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| ||||||||||||| ||||||||||  ||||||||||    
T  9762 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 9704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 307529 - 307460
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  307529 ccttggatgccttagagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 307460  T

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Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 268186 - 268116
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    ||||||| || | ||||||||||||||| |||||||||||||| |||  | |||  |||||||||||||||    
T  268186 ttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 268116  T

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Target: scaffold0123 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 25640 - 25568
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 76  Q
    ||||||| ||||||||||||||| |||| |||||||||||||| |||  | |||  ||||||||||| |||||    
T  25640 ttagatgattttgagtgcctgaaaatgtataataatgattaggcaagtttttagattgagattgaacttggaa 25568  T

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Target: scaffold0040 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 103244 - 103316
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    ||||||| | || ||||||||||||||||| |||||||||||||| |||  | |||  |||||||||||||||    
T  103244 ccttagaggattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 103316  T

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Target: scaffold0560 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 5482 - 5541
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||||||| |||||  ||| ||||||||||| | ||||||||||| |||||||||||    
T  5482 tttgagtgcctaaacatacctagtaatgattagggatgaatgtaggataagattgaacct 5541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 137
Target Start/End: Original strand, 4875 - 4910
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4875 actcgccacggcgagcagatgctctcgcctcgcgag 4910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 24660 - 24723
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 77  Q
    ||||||||||||||||  ||| |||||||| |||| ||||||||||  ||||||||||| ||||    
T  24660 ttgagtgcctgaacatacctagtaatgattgggaatgaatgtaggacaagattgaacctagaat 24723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 19817 - 19875
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||||||||||||  ||| |||||||| |||| ||||||||||  |||||||||||    
T  19817 ttgagtgcctgaacatacctagtaatgattgggaatgaatgtaggacaagattgaacct 19875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 21563 - 21614
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  21563 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 21614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 29455 - 29506
Alignment:
Q  86 tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||||||||| | || |||||||| |||||||||| ||||||||||||||||    
T  29455 tgggattctggcttgtactcgccatggcgagcagatgctctcgcctcgcgag 29506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 536 - 478
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||||||||||||||||  ||| ||||||||||| | ||||||||||| ||||| ||||    
T  536 tttgagtgcctgaacatacctagtaatgattaggtatgaatgtaggattagattaaacc 478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 7188 - 7118
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    ||||||| ||||||||| ||||| |||| |||||||||||||| |||  | |||  |||||||||||||||    
T  7188 ttagatgattttgagtgactgaatatgtataataatgattaggcaagtttttagattgagattgaacctgg 7118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 17421 - 17475
Alignment:
Q  18 gtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    ||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  17421 gtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 17475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 13665 - 13595
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    ||||||| || | ||||||||||||||| |||||||||||||| |||  | |||  |||||||||||||||    
T  13665 ttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 13595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 15866 - 15983
Alignment:
Q  99 tgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt--agattttgcgacctttgttgctcaagttgtcgag 196  Q
    |||||||||||  ||||| | |||| ||||||||||||||  |||||  ||||| || ||||||   |||||||||| |||||| || ||||||||   |    
T  15866 tgaactcgccatagcgagtataggccctcgcctcgcgagttgcccagttacagaatgccttgtttaggattttgcgatctttgtcgcacaagttgttatg 15965  T
Q  197 agttgaacccttgggtag 214  Q
    ||||||||| ||||||||    
T  15966 agttgaacctttgggtag 15983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 3230 - 3162
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 70  Q
    ||||||||| ||||||||||||||| ||||  ||||||||||||| |||  | |||  |||||||||||    
T  3230 ccttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaac 3162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 12855 - 12785
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 72  Q
    |||| ||||| || ||||||||||||||  ||| || |||||||||  ||||||||||| |||||||||||    
T  12855 ccttggatgccttagagtgcctgaacatacctagtattgattaggattgaatgtaggatcagattgaacct 12785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 8561 - 8619
Alignment:
Q  13 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    ||||||||| |||||||  ||| ||||||||||| | ||||||||||| ||||||||||    
T  8561 tttgagtgcgtgaacatacctagtaatgattagggatgaatgtaggataagattgaacc 8619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 55271 - 55313
Alignment:
Q  4 ttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||    
T  55271 ttagatgattttgagtgcctgaacatgtataagaatgattagg 55313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 3193 - 3148
Alignment:
Q  14 ttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 59  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||||||    
T  3193 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtagga 3148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 8492 - 8423
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    |||| ||||| || |||| |||||||||  || ||| |||||||||| ||||||||||| ||||||||||    
T  8492 ccttggatgccttagagtccctgaacatacctgatattgattaggaatgaatgtaggatcagattgaacc 8423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 62592 - 62556
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||| |||||||||| |||||||||||||||||    
T  62592 actcgccatggcgagcagatgctctcgcctcgcgagt 62556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 3993 - 4033
Alignment:
Q  97 cctgaactcgccacggcgagcagaggctctcgcctcgcgag 137  Q
    |||| |||||||| |||||||||| ||||||||||||||||    
T  3993 cctgtactcgccatggcgagcagatgctctcgcctcgcgag 4033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 3129 - 3073
Alignment:
Q  15 tgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 71  Q
    ||||||||||| |||  ||| ||||||||||||| ||||||||||  ||||||||||    
T  3129 tgagtgcctgatcatacctagtaatgattaggaatgaatgtaggacaagattgaacc 3073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 38833 - 38761
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 74  Q
    ||||||||| || ||||||| |||| |||| |||||||||||||| |||  | |||  |||||||||||||||    
T  38833 ccttagatgattctgagtgcgtgaatatgtataataatgattaggcaagtttttagattgagattgaacctgg 38761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 29221 - 29177
Alignment:
Q  2 ccttagatgcttttgagtgcctgaacatgtctaataatgattagg 46  Q
    ||||||||| ||||||||||||||| || | ||||||||||||||    
T  29221 ccttagatgattttgagtgcctgaatatatataataatgattagg 29177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 138
Target Start/End: Original strand, 192757 - 192793
Alignment:
Q  102 actcgccacggcgagcagaggctctcgcctcgcgagt 138  Q
    |||||||| |||||||||| |||||||||||||||||    
T  192757 actcgccatggcgagcagatgctctcgcctcgcgagt 192793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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