View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12573_high_4 (Length: 347)

Name: NF12573_high_4
Description: NF12573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12573_high_4
NF12573_high_4
[»] chr7 (52 HSPs)
chr7 (1-328)||(29762929-29763256)
chr7 (34-130)||(30813822-30813918)
chr7 (70-128)||(5409771-5409829)
chr7 (2-70)||(11061089-11061157)
chr7 (70-129)||(598269-598328)
chr7 (70-129)||(21864869-21864928)
chr7 (70-129)||(43027403-43027462)
chr7 (70-128)||(15680870-15680928)
chr7 (70-128)||(21880213-21880271)
chr7 (78-123)||(43250073-43250118)
chr7 (10-70)||(8234132-8234192)
chr7 (10-70)||(9408347-9408407)
chr7 (74-129)||(1433524-1433579)
chr7 (70-133)||(7438778-7438841)
chr7 (70-128)||(9778566-9778624)
chr7 (74-128)||(17852065-17852119)
chr7 (70-128)||(24339714-24339772)
chr7 (70-123)||(13770757-13770810)
chr7 (1-70)||(24339619-24339688)
chr7 (1-70)||(27945018-27945087)
chr7 (4-121)||(18215144-18215265)
chr7 (70-128)||(32093954-32094013)
chr7 (76-130)||(14729770-14729824)
chr7 (79-128)||(6490786-6490835)
chr7 (70-127)||(11665370-11665427)
chr7 (1-70)||(13770668-13770737)
chr7 (1-70)||(24105655-24105724)
chr7 (9-70)||(25481887-25481948)
chr7 (74-127)||(32287404-32287457)
chr7 (18-70)||(3991318-3991370)
chr7 (85-128)||(35862027-35862070)
chr7 (1-56)||(43027496-43027551)
chr7 (70-128)||(2334321-2334379)
chr7 (79-129)||(10230023-10230073)
chr7 (16-70)||(11831424-11831478)
chr7 (70-124)||(27229244-27229298)
chr7 (79-129)||(28155624-28155674)
chr7 (1-70)||(32094033-32094103)
chr7 (11-57)||(35861951-35861997)
chr7 (74-124)||(40287306-40287356)
chr7 (70-127)||(20545185-20545242)
chr7 (70-123)||(27732189-27732242)
chr7 (95-128)||(27945104-27945137)
chr7 (2-62)||(5409857-5409917)
chr7 (82-126)||(9408265-9408309)
chr7 (25-57)||(11665466-11665498)
chr7 (1-57)||(11722124-11722180)
chr7 (34-70)||(26033474-26033510)
chr7 (1-57)||(26733281-26733337)
chr7 (94-130)||(29812596-29812632)
chr7 (74-126)||(29998974-29999026)
chr7 (78-130)||(40131937-40131989)
[»] chr3 (68 HSPs)
chr3 (2-130)||(55401053-55401196)
chr3 (13-128)||(11610510-11610628)
chr3 (78-126)||(24204983-24205031)
chr3 (70-129)||(27505312-27505371)
chr3 (4-70)||(8587034-8587100)
chr3 (70-126)||(4987222-4987278)
chr3 (4-64)||(10954932-10954992)
chr3 (1-64)||(10335305-10335368)
chr3 (70-128)||(20503526-20503584)
chr3 (74-128)||(34185052-34185106)
chr3 (70-128)||(40993275-40993333)
chr3 (70-128)||(41961579-41961637)
chr3 (70-127)||(15999951-16000008)
chr3 (1-70)||(28917978-28918047)
chr3 (2-70)||(10268499-10268567)
chr3 (78-126)||(25775576-25775624)
chr3 (1-64)||(2620072-2620135)
chr3 (70-121)||(3631745-3631796)
chr3 (11-70)||(4987304-4987363)
chr3 (65-124)||(11666011-11666070)
chr3 (1-64)||(16000035-16000098)
chr3 (7-70)||(28812499-28812561)
chr3 (77-128)||(40052380-40052431)
chr3 (78-128)||(3163971-3164021)
chr3 (70-128)||(11252037-11252095)
chr3 (16-70)||(34910309-34910363)
chr3 (36-128)||(5407199-5407294)
chr3 (1-70)||(14216869-14216938)
chr3 (1-70)||(14222998-14223067)
chr3 (1-70)||(15796307-15796376)
chr3 (1-70)||(26492218-26492287)
chr3 (79-127)||(1389908-1389956)
chr3 (94-130)||(4990910-4990946)
chr3 (70-129)||(10955013-10955075)
chr3 (70-130)||(15796221-15796281)
chr3 (10-70)||(20503451-20503511)
chr3 (70-126)||(28918064-28918120)
chr3 (1-64)||(3164044-3164107)
chr3 (70-128)||(5440967-5441026)
chr3 (1-64)||(14979158-14979221)
chr3 (10-69)||(21479104-21479163)
chr3 (10-57)||(40052318-40052365)
chr3 (34-64)||(4201406-4201436)
chr3 (94-128)||(8842414-8842448)
chr3 (80-122)||(12704597-12704639)
chr3 (16-70)||(14209105-14209159)
chr3 (9-70)||(25775493-25775555)
chr3 (70-128)||(28812587-28812645)
chr3 (70-128)||(49651716-49651774)
chr3 (1-57)||(750644-750701)
chr3 (25-70)||(1509540-1509585)
chr3 (4-53)||(3865586-3865635)
chr3 (79-128)||(4466540-4466589)
chr3 (94-127)||(8789489-8789522)
chr3 (4-53)||(10318064-10318113)
chr3 (70-127)||(14216964-14217021)
chr3 (70-127)||(14223093-14223150)
chr3 (10-70)||(14747547-14747608)
chr3 (25-70)||(26508111-26508156)
chr3 (78-115)||(26665205-26665242)
chr3 (1-70)||(41961663-41961732)
chr3 (79-123)||(1509637-1509681)
chr3 (1-69)||(3610610-3610678)
chr3 (84-128)||(13807229-13807273)
chr3 (74-130)||(17276792-17276848)
chr3 (72-128)||(18427012-18427068)
chr3 (4-64)||(25948906-25948966)
chr3 (4-64)||(29508424-29508484)
[»] chr8 (61 HSPs)
chr8 (4-130)||(36450692-36450833)
chr8 (70-130)||(14134760-14134820)
chr8 (183-317)||(11064995-11065129)
chr8 (78-126)||(44067596-44067644)
chr8 (70-129)||(6065585-6065644)
chr8 (70-124)||(5813653-5813707)
chr8 (70-128)||(18407780-18407838)
chr8 (7-64)||(15816148-15816205)
chr8 (1-57)||(22651953-22652009)
chr8 (70-130)||(22652048-22652108)
chr8 (70-128)||(8343388-8343446)
chr8 (70-132)||(21465484-21465546)
chr8 (70-128)||(29510233-29510291)
chr8 (70-135)||(3951469-3951534)
chr8 (1-70)||(8343293-8343362)
chr8 (1-70)||(20873046-20873115)
chr8 (1-70)||(22197755-22197824)
chr8 (70-127)||(29447040-29447097)
chr8 (1-70)||(29510317-29510386)
chr8 (70-130)||(15816056-15816116)
chr8 (80-127)||(3658224-3658271)
chr8 (74-128)||(22197671-22197725)
chr8 (70-116)||(22943301-22943347)
chr8 (12-70)||(24613509-24613566)
chr8 (1-70)||(2572069-2572138)
chr8 (4-57)||(13436990-13437043)
chr8 (1-70)||(18170495-18170564)
chr8 (1-70)||(18634063-18634132)
chr8 (70-135)||(29447516-29447581)
chr8 (1-57)||(3677763-3677819)
chr8 (72-128)||(11803333-11803389)
chr8 (80-128)||(13397622-13397670)
chr8 (80-127)||(24205749-24205796)
chr8 (74-125)||(24727684-24727735)
chr8 (94-129)||(31514939-31514974)
chr8 (70-125)||(40332252-40332307)
chr8 (70-129)||(41831874-41831933)
chr8 (82-128)||(4673354-4673400)
chr8 (70-128)||(12570438-12570496)
chr8 (70-128)||(12570664-12570722)
chr8 (2-52)||(24196628-24196678)
chr8 (70-132)||(28745570-28745632)
chr8 (8-70)||(30271304-30271366)
chr8 (70-128)||(31557057-31557115)
chr8 (70-128)||(34450961-34451019)
chr8 (73-131)||(39820493-39820550)
chr8 (73-126)||(926730-926783)
chr8 (1-70)||(4673438-4673507)
chr8 (29-70)||(4948657-4948698)
chr8 (79-128)||(8343037-8343086)
chr8 (83-128)||(17751730-17751775)
chr8 (83-128)||(17760717-17760762)
chr8 (25-70)||(25566842-25566887)
chr8 (9-70)||(30077400-30077461)
chr8 (1-62)||(41838144-41838205)
chr8 (1-49)||(926822-926870)
chr8 (70-126)||(3025612-3025668)
chr8 (70-130)||(4122176-4122236)
chr8 (34-70)||(8342982-8343018)
chr8 (80-128)||(13403177-13403225)
chr8 (1-57)||(25192373-25192429)
[»] chr1 (86 HSPs)
chr1 (1-130)||(48450548-48450669)
chr1 (70-133)||(40917821-40917884)
chr1 (70-128)||(9828116-9828174)
chr1 (70-128)||(18471356-18471414)
chr1 (42-128)||(46940748-46940834)
chr1 (70-127)||(40258874-40258931)
chr1 (70-126)||(1486646-1486702)
chr1 (70-126)||(16297223-16297279)
chr1 (10-70)||(22881629-22881689)
chr1 (1-64)||(398784-398847)
chr1 (1-64)||(34298413-34298476)
chr1 (70-128)||(6427536-6427594)
chr1 (10-64)||(30359374-30359428)
chr1 (70-128)||(37598892-37598950)
chr1 (4-70)||(46348396-46348462)
chr1 (79-128)||(29144320-29144369)
chr1 (9-70)||(31672908-31672969)
chr1 (7-70)||(1705005-1705068)
chr1 (79-126)||(25452108-25452155)
chr1 (79-126)||(42359391-42359438)
chr1 (2-64)||(1486728-1486790)
chr1 (78-128)||(2218297-2218347)
chr1 (70-128)||(5898206-5898264)
chr1 (1-70)||(13011228-13011298)
chr1 (4-62)||(16812523-16812581)
chr1 (70-132)||(18337390-18337452)
chr1 (4-70)||(18556469-18556535)
chr1 (70-128)||(22515827-22515885)
chr1 (89-127)||(28663677-28663715)
chr1 (10-137)||(35702533-35702661)
chr1 (1-70)||(40917728-40917795)
chr1 (70-128)||(46348323-46348381)
chr1 (70-128)||(47989569-47989627)
chr1 (1-70)||(5927353-5927422)
chr1 (1-70)||(21378555-21378624)
chr1 (25-70)||(24577199-24577244)
chr1 (1-70)||(31015020-31015089)
chr1 (9-66)||(40285671-40285728)
chr1 (5-70)||(42359462-42359527)
chr1 (1-70)||(47989475-47989543)
chr1 (1-130)||(48040412-48040544)
chr1 (96-129)||(48547937-48547970)
chr1 (14-70)||(113289-113345)
chr1 (5-65)||(2896139-2896199)
chr1 (1-57)||(6427327-6427383)
chr1 (79-127)||(10233326-10233374)
chr1 (74-130)||(15323233-15323289)
chr1 (6-70)||(22515900-22515964)
chr1 (84-128)||(31694639-31694683)
chr1 (8-52)||(37598816-37598860)
chr1 (80-128)||(42004882-42004929)
chr1 (7-70)||(1815240-1815303)
chr1 (85-128)||(7918154-7918197)
chr1 (6-64)||(9033026-9033085)
chr1 (73-128)||(18556385-18556440)
chr1 (85-128)||(22947806-22947849)
chr1 (8-70)||(32434729-32434792)
chr1 (70-129)||(32461392-32461451)
chr1 (19-70)||(40258946-40258997)
chr1 (70-128)||(1815318-1815376)
chr1 (70-128)||(5944355-5944413)
chr1 (11-57)||(9449034-9449080)
chr1 (2-64)||(17754289-17754351)
chr1 (94-128)||(21365992-21366026)
chr1 (80-130)||(22794016-22794066)
chr1 (74-128)||(34712323-34712377)
chr1 (70-128)||(38078601-38078659)
chr1 (4-70)||(38078674-38078740)
chr1 (1-70)||(6612184-6612253)
chr1 (8-57)||(9103624-9103673)
chr1 (94-127)||(10572535-10572568)
chr1 (1-70)||(14359535-14359603)
chr1 (75-128)||(16164244-16164297)
chr1 (73-126)||(17778617-17778670)
chr1 (85-130)||(27965938-27965983)
chr1 (79-128)||(52903316-52903365)
chr1 (1-57)||(1262861-1262917)
chr1 (1-57)||(9709797-9709853)
chr1 (16-64)||(10233245-10233293)
chr1 (1-57)||(10572615-10572671)
chr1 (86-122)||(13011172-13011208)
chr1 (34-70)||(18337339-18337375)
chr1 (84-128)||(22881567-22881611)
chr1 (26-70)||(32461476-32461520)
chr1 (94-130)||(36878551-36878587)
chr1 (9-57)||(36905982-36906030)
[»] chr6 (60 HSPs)
chr6 (1-70)||(10770687-10770756)
chr6 (1-128)||(34595111-34595253)
chr6 (1-130)||(7938093-7938221)
chr6 (1-70)||(8776986-8777055)
chr6 (4-70)||(17841602-17841668)
chr6 (4-127)||(31959139-31959268)
chr6 (1-70)||(426527-426596)
chr6 (1-62)||(853880-853941)
chr6 (1-70)||(8365532-8365601)
chr6 (1-70)||(12696301-12696370)
chr6 (1-70)||(16766674-16766743)
chr6 (1-70)||(16833285-16833354)
chr6 (65-127)||(9658935-9658998)
chr6 (70-128)||(4878004-4878061)
chr6 (70-128)||(8365448-8365506)
chr6 (70-128)||(8776908-8776966)
chr6 (70-128)||(17327590-17327648)
chr6 (70-128)||(28152159-28152217)
chr6 (70-128)||(28715356-28715414)
chr6 (76-121)||(7930368-7930413)
chr6 (1-70)||(9107383-9107452)
chr6 (70-127)||(31384991-31385048)
chr6 (70-129)||(16766769-16766828)
chr6 (70-128)||(3209460-3209518)
chr6 (70-128)||(10339054-10339112)
chr6 (70-128)||(24645542-24645600)
chr6 (1-70)||(1681735-1681804)
chr6 (1-61)||(4877919-4877980)
chr6 (93-130)||(7723197-7723234)
chr6 (1-70)||(7977843-7977912)
chr6 (70-127)||(17841530-17841587)
chr6 (79-127)||(1700406-1700454)
chr6 (8-64)||(7265612-7265668)
chr6 (79-127)||(26553816-26553864)
chr6 (1-64)||(3398596-3398658)
chr6 (11-70)||(7801169-7801228)
chr6 (7-62)||(7930288-7930343)
chr6 (78-125)||(9025448-9025495)
chr6 (1-64)||(9658856-9658919)
chr6 (27-70)||(31384923-31384966)
chr6 (1-64)||(31579244-31579307)
chr6 (70-125)||(32978842-32978897)
chr6 (34-64)||(7151422-7151452)
chr6 (70-128)||(7248430-7248488)
chr6 (78-128)||(7625185-7625235)
chr6 (79-125)||(8389411-8389457)
chr6 (70-128)||(16833369-16833427)
chr6 (4-70)||(28152079-28152144)
chr6 (70-128)||(34073278-34073335)
chr6 (85-126)||(5569825-5569866)
chr6 (94-131)||(5732471-5732508)
chr6 (79-128)||(9107299-9107348)
chr6 (2-63)||(19044442-19044503)
chr6 (70-99)||(25038029-25038058)
chr6 (4-57)||(30866170-30866223)
chr6 (34-70)||(4118346-4118382)
chr6 (70-126)||(5000557-5000613)
chr6 (34-70)||(5970121-5970157)
chr6 (1-57)||(9027155-9027211)
chr6 (7-55)||(19147431-19147479)
[»] chr4 (64 HSPs)
chr4 (1-128)||(23292926-23293068)
chr4 (35-128)||(3064868-3064961)
chr4 (70-127)||(3947702-3947759)
chr4 (1-126)||(22440559-22440682)
chr4 (1-64)||(36635301-36635364)
chr4 (70-128)||(715545-715603)
chr4 (70-128)||(752871-752929)
chr4 (70-128)||(24613630-24613688)
chr4 (70-128)||(35161097-35161155)
chr4 (74-128)||(42640589-42640643)
chr4 (79-128)||(18513175-18513224)
chr4 (1-70)||(19482645-19482714)
chr4 (70-127)||(30982808-30982865)
chr4 (74-125)||(28084589-28084640)
chr4 (5-64)||(35158004-35158063)
chr4 (78-128)||(2625959-2626009)
chr4 (4-70)||(14465088-14465154)
chr4 (70-128)||(19482740-19482798)
chr4 (70-128)||(22234819-22234877)
chr4 (70-128)||(29205529-29205587)
chr4 (73-123)||(30838285-30838335)
chr4 (70-128)||(35157925-35157983)
chr4 (70-128)||(36635391-36635449)
chr4 (1-70)||(27706190-27706259)
chr4 (1-70)||(40481614-40481682)
chr4 (10-70)||(11596365-11596425)
chr4 (2-70)||(12797351-12797418)
chr4 (1-64)||(2361994-2362057)
chr4 (70-129)||(12895213-12895272)
chr4 (2-57)||(12895300-12895355)
chr4 (73-124)||(20743210-20743261)
chr4 (73-128)||(24343577-24343632)
chr4 (19-70)||(29205439-29205490)
chr4 (4-70)||(30298926-30298993)
chr4 (4-70)||(30327794-30327861)
chr4 (25-64)||(54580042-54580081)
chr4 (78-132)||(941314-941368)
chr4 (94-128)||(5775304-5775338)
chr4 (92-130)||(12708225-12708263)
chr4 (83-129)||(12895054-12895100)
chr4 (70-128)||(15724483-15724541)
chr4 (70-128)||(16073455-16073513)
chr4 (4-70)||(21945483-21945549)
chr4 (70-128)||(28964188-28964246)
chr4 (15-57)||(32273552-32273594)
chr4 (70-128)||(34306744-34306802)
chr4 (70-128)||(49431087-49431145)
chr4 (82-128)||(53381530-53381576)
chr4 (70-126)||(4157210-4157266)
chr4 (70-126)||(4157497-4157553)
chr4 (94-127)||(4383451-4383484)
chr4 (1-62)||(11651155-11651216)
chr4 (70-127)||(14465006-14465063)
chr4 (10-63)||(50280867-50280920)
chr4 (70-130)||(1148370-1148430)
chr4 (34-70)||(6485624-6485660)
chr4 (80-128)||(11596297-11596345)
chr4 (80-128)||(11931362-11931410)
chr4 (79-127)||(17425348-17425396)
chr4 (80-128)||(17876237-17876285)
chr4 (34-70)||(28964261-28964297)
chr4 (79-127)||(40965341-40965389)
chr4 (72-128)||(47264060-47264116)
chr4 (1-64)||(49431002-49431066)
[»] chr2 (51 HSPs)
chr2 (1-128)||(18840953-18841095)
chr2 (70-128)||(26769583-26769641)
chr2 (70-126)||(2438661-2438717)
chr2 (70-130)||(35056940-35057000)
chr2 (3-70)||(30717543-30717610)
chr2 (1-70)||(19536410-19536480)
chr2 (78-128)||(37419823-37419873)
chr2 (74-128)||(37559042-37559096)
chr2 (70-128)||(38117099-38117157)
chr2 (1-70)||(12940948-12941017)
chr2 (1-70)||(15657841-15657910)
chr2 (1-70)||(20539687-20539756)
chr2 (70-127)||(28596530-28596587)
chr2 (1-70)||(30335394-30335463)
chr2 (70-127)||(44860392-44860449)
chr2 (2-70)||(6940233-6940301)
chr2 (2-70)||(15972851-15972919)
chr2 (2-70)||(18421941-18422009)
chr2 (70-130)||(42511320-42511380)
chr2 (1-64)||(34785001-34785064)
chr2 (4-70)||(21374712-21374778)
chr2 (4-70)||(30404863-30404929)
chr2 (78-128)||(34006930-34006980)
chr2 (70-128)||(34993922-34993980)
chr2 (4-70)||(37558957-37559023)
chr2 (79-128)||(10535685-10535734)
chr2 (5-62)||(24894370-24894427)
chr2 (4-64)||(23718006-23718066)
chr2 (4-64)||(24105678-24105738)
chr2 (70-130)||(30717457-30717517)
chr2 (70-127)||(35449568-35449627)
chr2 (1-64)||(21616739-21616802)
chr2 (2-57)||(34337202-34337257)
chr2 (70-128)||(11223793-11223850)
chr2 (70-128)||(15972934-15972992)
chr2 (1-70)||(23058455-23058525)
chr2 (70-128)||(24009356-24009414)
chr2 (74-128)||(28412422-28412476)
chr2 (70-128)||(34784911-34784969)
chr2 (2-64)||(36756363-36756425)
chr2 (3-64)||(2331773-2331834)
chr2 (75-116)||(14996171-14996212)
chr2 (73-126)||(15657939-15657992)
chr2 (79-128)||(15909570-15909619)
chr2 (71-128)||(21782744-21782801)
chr2 (73-129)||(12601140-12601196)
chr2 (70-130)||(19580223-19580283)
chr2 (70-126)||(19942326-19942382)
chr2 (70-130)||(27084330-27084390)
chr2 (70-126)||(36756275-36756331)
chr2 (10-54)||(38117188-38117232)
[»] scaffold0086 (1 HSPs)
scaffold0086 (70-129)||(3000-3059)
[»] chr5 (60 HSPs)
chr5 (1-128)||(6326253-6326379)
chr5 (1-64)||(19552562-19552625)
chr5 (4-70)||(14674249-14674315)
chr5 (1-126)||(21190998-21191138)
chr5 (4-129)||(21576684-21576824)
chr5 (70-128)||(27932296-27932354)
chr5 (70-128)||(30098398-30098456)
chr5 (70-128)||(42893421-42893479)
chr5 (78-131)||(2436980-2437033)
chr5 (1-70)||(6247599-6247668)
chr5 (75-128)||(14873588-14873641)
chr5 (9-70)||(21351918-21351979)
chr5 (1-70)||(21522727-21522796)
chr5 (1-70)||(21533293-21533362)
chr5 (1-70)||(24906314-24906383)
chr5 (4-64)||(6770523-6770583)
chr5 (72-128)||(32766872-32766928)
chr5 (70-126)||(43001866-43001922)
chr5 (1-64)||(22013391-22013454)
chr5 (70-125)||(39268541-39268596)
chr5 (7-70)||(39698524-39698587)
chr5 (2-57)||(41995449-41995504)
chr5 (94-128)||(24906252-24906286)
chr5 (70-124)||(30183621-30183675)
chr5 (70-128)||(31084389-31084447)
chr5 (70-128)||(39698613-39698671)
chr5 (70-128)||(43564942-43565000)
chr5 (13-70)||(33178014-33178071)
chr5 (1-70)||(37328857-37328926)
chr5 (9-70)||(42893345-42893406)
chr5 (76-120)||(17088358-17088402)
chr5 (80-128)||(19820328-19820376)
chr5 (70-130)||(21522822-21522882)
chr5 (70-130)||(21533388-21533448)
chr5 (10-70)||(31084309-31084369)
chr5 (76-128)||(35017110-35017162)
chr5 (70-129)||(7677777-7677836)
chr5 (1-64)||(13287418-13287481)
chr5 (70-129)||(21194062-21194121)
chr5 (78-137)||(41558579-41558638)
chr5 (94-128)||(10298635-10298669)
chr5 (70-116)||(15382546-15382592)
chr5 (70-128)||(16304366-16304424)
chr5 (94-128)||(17123132-17123166)
chr5 (76-130)||(17593661-17593715)
chr5 (94-128)||(22423764-22423798)
chr5 (70-124)||(36642696-36642749)
chr5 (4-70)||(4105237-4105305)
chr5 (92-125)||(18586232-18586265)
chr5 (5-62)||(19579682-19579739)
chr5 (70-127)||(21542102-21542159)
chr5 (4-64)||(43564863-43564921)
chr5 (8-56)||(10298553-10298601)
chr5 (1-64)||(14422881-14422942)
chr5 (9-61)||(17123033-17123085)
chr5 (2-50)||(17177056-17177104)
chr5 (4-64)||(19168840-19168900)
chr5 (1-57)||(22423838-22423894)
chr5 (70-126)||(23015926-23015982)
chr5 (80-128)||(38464313-38464361)
[»] scaffold0450 (1 HSPs)
scaffold0450 (70-128)||(8564-8622)
[»] scaffold0103 (1 HSPs)
scaffold0103 (4-70)||(51791-51857)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-70)||(178831-178901)
[»] scaffold0003 (3 HSPs)
scaffold0003 (70-128)||(241666-241724)
scaffold0003 (1-64)||(241571-241634)
scaffold0003 (7-64)||(348083-348142)
[»] scaffold0223 (1 HSPs)
scaffold0223 (1-70)||(20149-20218)
[»] scaffold0007 (1 HSPs)
scaffold0007 (78-126)||(225199-225247)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-135)||(8775-8924)
[»] scaffold0793 (1 HSPs)
scaffold0793 (70-128)||(4821-4879)
[»] scaffold0652 (2 HSPs)
scaffold0652 (70-132)||(398-460)
scaffold0652 (1-70)||(475-544)
[»] scaffold0306 (2 HSPs)
scaffold0306 (4-62)||(13380-13438)
scaffold0306 (70-126)||(13467-13523)
[»] scaffold0152 (2 HSPs)
scaffold0152 (4-62)||(21889-21947)
scaffold0152 (70-126)||(21804-21860)
[»] scaffold0027 (2 HSPs)
scaffold0027 (1-70)||(46659-46728)
scaffold0027 (94-128)||(46742-46776)
[»] scaffold0004 (1 HSPs)
scaffold0004 (70-127)||(92883-92940)
[»] scaffold0050 (1 HSPs)
scaffold0050 (70-130)||(70339-70399)
[»] scaffold0361 (1 HSPs)
scaffold0361 (16-128)||(14522-14646)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-64)||(90820-90883)
scaffold0022 (70-128)||(90904-90962)
[»] scaffold0380 (1 HSPs)
scaffold0380 (70-128)||(8662-8720)
[»] scaffold0019 (1 HSPs)
scaffold0019 (70-128)||(71797-71855)
[»] scaffold0246 (1 HSPs)
scaffold0246 (1-70)||(19553-19621)
[»] scaffold0011 (1 HSPs)
scaffold0011 (25-70)||(17762-17807)
[»] scaffold0008 (1 HSPs)
scaffold0008 (70-126)||(263303-263359)
[»] scaffold0009 (1 HSPs)
scaffold0009 (82-121)||(188473-188512)
[»] scaffold1528 (1 HSPs)
scaffold1528 (2-64)||(1013-1075)
[»] scaffold0475 (1 HSPs)
scaffold0475 (94-128)||(3393-3427)
[»] scaffold0136 (1 HSPs)
scaffold0136 (70-128)||(3778-3836)
[»] scaffold0021 (2 HSPs)
scaffold0021 (70-128)||(2978-3036)
scaffold0021 (1-70)||(130459-130528)
[»] scaffold0020 (1 HSPs)
scaffold0020 (78-128)||(135263-135313)
[»] scaffold0512 (1 HSPs)
scaffold0512 (70-130)||(4974-5034)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-45)||(10509-10553)
[»] scaffold0227 (1 HSPs)
scaffold0227 (16-64)||(7330-7378)


Alignment Details
Target: chr7 (Bit Score: 300; Significance: 1e-169; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 1 - 328
Target Start/End: Complemental strand, 29763256 - 29762929
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttacacacgacacgtgtccgacaccagaacacgcc 100  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  29763256 cacgacatagacactgacacaccaacacaacttataatttgaaaaaatcacataattaagtgtagttacacacgacacgtgtccgacatcaggacacgcc 29763157  T
Q  101 taattcgaggagtgtccgtgcttcatagctcagaagtcacataatgaacacttgctaaccaaaaagagtagaaattaatgagatacctgagaagcaagga 200  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29763156 taatccgaggagtgtccgtgcttcatagctcagaagtcacgtaatgaacacttgctaaccaaaaagagtagaaattaatgagatacctgagaagcaagga 29763057  T
Q  201 gaacagcatctctatccaaatagagagtaaagtgactagtaagactaaaactaccagtgagccattttcctgctggaacatacagctgagaaccaccttg 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29763056 gaacagcatctctatccaaatagagagtaaagtgactagtaagactaaaactaccagtgagccattttcctgctggaacatacagctgagaaccaccttg 29762957  T
Q  301 agaaccatactgactcaggtgactaatt 328  Q
    ||||||||||||||||||||||||||||    
T  29762956 agaaccatactgactcaggtgactaatt 29762929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 34 - 130
Target Start/End: Original strand, 30813822 - 30813918
Alignment:
Q  34 ataatttgaaaaaatcacataattaagtgtagttacacacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    ||||||||| ||||| |||||||| |||||| |||||   |   ||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  30813822 ataatttgagaaaattacataattcagtgtaattacaggtgttgcgtgtccgacatcagaacacgcctaatccgaggagtgtccgtgcttcatagct 30813918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 5409829 - 5409771
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  5409829 acacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 11061157 - 11061089
Alignment:
Q  2 acgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||||| ||||| || |||||||||||||||||||||||| ||| || |||||    
T  11061157 acgacacggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataattaca 11061089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 598269 - 598328
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    ||||||||||||||||||||| | ||||||||||| |||| |||||||||||||||||||    
T  598269 acacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagc 598328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 21864869 - 21864928
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||    
T  21864869 acacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatagc 21864928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 43027462 - 43027403
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    ||||||||||||||||||||| | ||||||||||| ||| ||||||||||||||||||||    
T  43027462 acacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatagc 43027403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 15680870 - 15680928
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||||||||||   ||||| |||||||||||||||||||||||||||||    
T  15680870 acacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 21880213 - 21880271
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| ||||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  21880213 acacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcatag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 43250073 - 43250118
Alignment:
Q  78 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgctt 123  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  43250073 cgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 43250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 8234132 - 8234192
Alignment:
Q  10 gacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||| |||||||| |||||||| ||||||||||||||| |||||||| ||||||||||||    
T  8234132 gacacagacacaccgacacaactaataatttgaaaaaataacataattcagtgtagttaca 8234192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 9408407 - 9408347
Alignment:
Q  10 gacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||| |||||| | |||||||||||||||||||||||| |||||| |||||    
T  9408407 gacactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattaca 9408347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 129
Target Start/End: Original strand, 1433524 - 1433579
Alignment:
Q  74 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    |||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  1433524 gacatgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatagc 1433579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 7438778 - 7438841
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctcag 133  Q
    ||||||||| ||| |||||| || ||||||||||||| ||||||||||||||||||||| ||||    
T  7438778 acacgacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgcttcataggtcag 7438841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 9778566 - 9778624
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||| |||||||||||||||| | ||||||||||| | |||||||||||||||||||||    
T  9778566 acacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcatag 9778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 17852065 - 17852119
Alignment:
Q  74 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||||||   |||| ||||||||||||||||||||||||||||||    
T  17852065 gacacgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcatag 17852119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 24339714 - 24339772
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||| ||||||||| | ||||||||||| ||||||||| |||||||||||||    
T  24339714 acacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcatag 24339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 13770757 - 13770810
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgctt 123  Q
    |||| |||||||||||||||| ||||||||||||| ||| ||||||||||||||    
T  13770757 acacaacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 24339619 - 24339688
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||| ||||| |||||| || ||||| || |||||||||||||||||||||||| |||||| |||||    
T  24339619 cacgacatggacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattaca 24339688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 27945018 - 27945087
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||| || |||| ||| ||||||||| ||||| |||||||| |||||| |||||    
T  27945018 cacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattaca 27945087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 18215265 - 18215144
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttacacacgac----acgtgtccgacaccagaacacgc 99  Q
    |||||||||||| |||| || || || || |||||||||||||||||||||||  ||||||||||||   | |     ||||||||||||| | ||||||    
T  18215265 gacacggacactaacacgccgacgcagctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtcgtgtccgacaccgggacacgc 18215166  T
Q  100 ctaattcgaggagtgtccgtgc 121  Q
    |||||  |||||||||||||||    
T  18215165 ctaatctgaggagtgtccgtgc 18215144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 32094013 - 32093954
Alignment:
Q  70 acacgacacgtgtccgacaccaga-acacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||||||| |  ||||||||||| |||||||||| ||||||||||||    
T  32094013 acacgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcatag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 130
Target Start/End: Original strand, 14729770 - 14729824
Alignment:
Q  76 cacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    ||||||||||||||| | |||||| |||| |||||||||||||| ||||||||||    
T  14729770 cacgtgtccgacaccgggacacgcttaatccgaggagtgtccgtacttcatagct 14729824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 6490786 - 6490835
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||| | |||||| |||| |||||||||||||||||||||||    
T  6490786 gtgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcatag 6490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 11665427 - 11665370
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    |||||||||||||||||||||  |||||  ||||| |||||| |||||||||||||||    
T  11665427 acacgacacgtgtccgacaccgaaacacatctaatacgaggaatgtccgtgcttcata 11665370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 13770668 - 13770737
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||| || || ||||| || ||||||| ||||||| |||||||| |||||| |||||    
T  13770668 cacgacacggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaattaca 13770737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 24105655 - 24105724
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||| || ||||| || |||||||||||||||  ||| ||| |||||| |||||    
T  24105655 cacgacacggacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattaca 24105724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 25481887 - 25481948
Alignment:
Q  9 ggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||| |||||| || ||||| || |||||||||||||||||||||||| |||||| |||||    
T  25481887 ggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattaca 25481948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 32287457 - 32287404
Alignment:
Q  74 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    |||| |||||||||||| | |||| |||||| ||||||||||||||||||||||    
T  32287457 gacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 3991318 - 3991370
Alignment:
Q  18 cacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||| |||||||| |||||||||||||||||||||||| ||| || |||||    
T  3991318 cacaccgacacaactaataatttgaaaaaatcacataattcagtataattaca 3991370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 35862027 - 35862070
Alignment:
Q  85 gacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||| || ||||||||||| |||||||||||||||||||||||    
T  35862027 gacacgaggacacgcctaatccgaggagtgtccgtgcttcatag 35862070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 43027551 - 43027496
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataat 56  Q
    ||||||||||||||||||||  | || || || |||||||||||||||||||||||    
T  43027551 cacgacacggacactgacacggcgacccagctaataatttgaaaaaatcacataat 43027496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 2334321 - 2334379
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| ||||||||||   |||||| ||||| ||||||||||||||| |||||||    
T  2334321 acacgacacatgtccgacactgaaacacgtctaatccgaggagtgtccgtgtttcatag 2334379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 10230073 - 10230023
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    ||||| ||||||||||||||||| || | |||||| |||||||||||||||    
T  10230073 gtgtcggacaccagaacacgcctgatccaaggagtttccgtgcttcatagc 10230023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 11831424 - 11831478
Alignment:
Q  16 gacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||| | |||||||| ||||||||||||||||| |||||| |||||| |||||    
T  11831424 gacacatcgacacaactaataatttgaaaaaatcatataatttagtgtaattaca 11831478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 27229298 - 27229244
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttc 124  Q
    |||||| |||||| |||||| || |||||||||||||||||| ||||| ||||||    
T  27229298 acacgatacgtgttcgacactaggacacgcctaattcgaggaatgtccatgcttc 27229244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 28155624 - 28155674
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    ||||| |||||||| ||||||||||| | |||| |||||||||||||||||    
T  28155624 gtgtcggacaccaggacacgcctaatccaaggaatgtccgtgcttcatagc 28155674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 32094103 - 32094033
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaa-aaaatcacataattaagtgtagttaca 70  Q
    ||||||||  ||||| |||  ||||||||||| |||||||||| |||||||||||||| |||||| |||||    
T  32094103 cacgacacaaacactaacatgccaacacaactaataatttgaaaaaaatcacataattcagtgtaattaca 32094033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 35861951 - 35861997
Alignment:
Q  11 acactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    ||||| |||| || |||||||| ||||||||||||||||||||||||    
T  35861951 acactaacacgccgacacaactaataatttgaaaaaatcacataatt 35861997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 40287356 - 40287306
Alignment:
Q  74 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttc 124  Q
    ||||| ||||||||||| | ||| ||||||| |||||||||||||||||||    
T  40287356 gacacatgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 20545242 - 20545185
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    ||||||||| ||||||||||  | |||||  |||||||||||||||| ||||||||||    
T  20545242 acacgacacatgtccgacacggggacacgtttaattcgaggagtgtctgtgcttcata 20545185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 27732242 - 27732189
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgctt 123  Q
    ||||||||  ||||||||||||| |||| ||||||||||  |||||||||||||    
T  27732242 acacgacatatgtccgacaccaggacacacctaattcgaaaagtgtccgtgctt 27732189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 128
Target Start/End: Original strand, 27945104 - 27945137
Alignment:
Q  95 cacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| ||||||||||||||||||||||||    
T  27945104 cacgcctaactcgaggagtgtccgtgcttcatag 27945137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 5409917 - 5409857
Alignment:
Q  2 acgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtg 62  Q
    |||||| |||||||||||| |  | ||| || |||||||||||||||||||||||| ||||    
T  5409917 acgacatggacactgacacgctgatacagctaataatttgaaaaaatcacataattcagtg 5409857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 9408309 - 9408265
Alignment:
Q  82 tccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    |||||||||| |||||||||||| ||| || ||||||||||||||    
T  9408309 tccgacaccaaaacacgcctaatccgaagaatgtccgtgcttcat 9408265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 11665498 - 11665466
Alignment:
Q  25 acacaactcataatttgaaaaaatcacataatt 57  Q
    |||||||| ||||||||||||||||||||||||    
T  11665498 acacaactaataatttgaaaaaatcacataatt 11665466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11722180 - 11722124
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    |||||||||||||||||||| || ||||  || | ||||||| ||||||||||||||    
T  11722180 cacgacacggacactgacacgccgacaccgctaacaatttgagaaaatcacataatt 11722124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 26033510 - 26033474
Alignment:
Q  34 ataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||||||| |||||| |||||    
T  26033510 ataatttgaaaaaatcacataattcagtgtaattaca 26033474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26733281 - 26733337
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    ||||||||||||||||||||  | ||||  || ||||||||| ||||||||||||||    
T  26733281 cacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataatt 26733337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 29812632 - 29812596
Alignment:
Q  94 acacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  29812632 acacgcctaatccgagaagtgtccgtgcttcatagct 29812596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 29999026 - 29998974
Alignment:
Q  74 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    |||||||||||||||||  |||||| |||||  ||||||||||| ||||||||    
T  29999026 gacacgtgtccgacacctaaacacgtctaatcggaggagtgtccatgcttcat 29998974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 40131989 - 40131937
Alignment:
Q  78 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    ||||||||||||  | ||||| ||||| ||||||||||| |||||||||||||    
T  40131989 cgtgtccgacacagggacacgtctaatccgaggagtgtctgtgcttcatagct 40131937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 6e-22; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 55401053 - 55401196
Alignment:
Q  2 acgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttac---------------acacgacacgtgtccga 86  Q
    |||||||||||||||| || || |||||||| |||||||||||||||||||||||| |||||| ||||               |||||||||||||||||    
T  55401053 acgacacggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccga 55401152  T
Q  87 caccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    ||||   ||||||||||| |||||||||||||||||||||||||    
T  55401153 caccgagacacgcctaatccgaggagtgtccgtgcttcatagct 55401196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 128
Target Start/End: Original strand, 11610510 - 11610628
Alignment:
Q  13 actgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttacacacgaca---cgtgtccgacaccagaacacgcctaattcgag 109  Q
    |||||||| |||||||  || ||||||| |||||||||||||||| ||||||||||||   | ||   ||||||||||| | | |||||||||||  |||    
T  11610510 actgacacgccaacaccgctaataatttaaaaaaatcacataattcagtgtagttacaagtgtcaagtcgtgtccgacatcgggacacgcctaatctgag 11610609  T
Q  110 gagtgtccgtgcttcatag 128  Q
    |||||||||||||||||||    
T  11610610 gagtgtccgtgcttcatag 11610628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 24205031 - 24204983
Alignment:
Q  78 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24205031 cgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 24204983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 27505312 - 27505371
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    ||||||||||||||||||||| | ||| ||||||| ||||||||||||||||||||||||    
T  27505312 acacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcatagc 27505371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 8587100 - 8587034
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||| || ||||| ||  |||||||||||||||||||||||||||||| |||||    
T  8587100 gacacggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattaca 8587034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 4987278 - 4987222
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    ||||||||||||||||||||| | ||||||||||| |||||||||||||| ||||||    
T  4987278 acacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 10954932 - 10954992
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||| |||||||||| || |||||||| |||||||||||||||||||||||| ||||||    
T  10954932 gacacgaacactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgta 10954992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 10335368 - 10335305
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||||||||||||||| || |||||||| ||||||||||||| ||||||| || ||||||    
T  10335368 cacgacacggacactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgta 10335305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 20503526 - 20503584
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| |||| |||||| | ||||||||||| |||||||||||||||||||||||    
T  20503526 acacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 34185106 - 34185052
Alignment:
Q  74 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||| |||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  34185106 gacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 40993333 - 40993275
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| ||||||||||| | ||||||||||| |||||||||||| ||||||||||    
T  40993333 acacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatag 40993275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 41961637 - 41961579
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||||||  | ||||||||||| |||| ||||||||||||||||||    
T  41961637 acacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 16000008 - 15999951
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    ||||||||||||||||||||| | ||||||||||| | |||||||||||||| |||||    
T  16000008 acacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 28917978 - 28918047
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||| |||||||| || ||| | || |||||||||||||||||||||||| |||||| |||||    
T  28917978 cacgacacggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattaca 28918047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 10268567 - 10268499
Alignment:
Q  2 acgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||| |||||||||||| || |||||  | |||||||||||||||||||||||| |||||| |||||    
T  10268567 acgacatggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattaca 10268499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 25775576 - 25775624
Alignment:
Q  78 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  25775576 cgtgtccgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 25775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2620135 - 2620072
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||| ||||||||||||| || |||| ||| || |||||| |||||||||||||||||||||    
T  2620135 cacgactcggacactgacacgccgacaccactaatcatttgagaaaatcacataattaagtgta 2620072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 121
Target Start/End: Original strand, 3631745 - 3631796
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgc 121  Q
    ||||||||| ||||||||||||| ||||||||| | ||||||||||||||||    
T  3631745 acacgacacatgtccgacaccaggacacgcctagtccgaggagtgtccgtgc 3631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 4987363 - 4987304
Alignment:
Q  11 acactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||| || ||||| || |||||||||||||||||||||||| |||||| |||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattaca 4987304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 11666011 - 11666070
Alignment:
Q  65 gttacacacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttc 124  Q
    |||| |||||||||||||| || | | ||||||||||||||| |||||||||||||||||    
T  11666011 gttagacacgacacgtgtctgatatcggaacacgcctaattcaaggagtgtccgtgcttc 11666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16000098 - 16000035
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||| ||||||||||| || |||||||| ||||||| ||||||| |||||||| ||||||    
T  16000098 cacgacacagacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgta 16000035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 28812499 - 28812561
Alignment:
Q  7 acggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||| ||||| || |||||||| |||||||||| ||||||||||||| ||||||||||||    
T  28812499 acggacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttaca 28812561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 40052380 - 40052431
Alignment:
Q  77 acgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||| | ||||||||||| |||||||||| ||||||||||||    
T  40052380 acgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcatag 40052431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 3164021 - 3163971
Alignment:
Q  78 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||   |||||||||||||||||||||||| ||||||||||    
T  3164021 cgtgtccgacaccgagacacgcctaattcgaggagtgtccatgcttcatag 3163971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 11252037 - 11252095
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||| ||||||||||| || | ||||||||||||| ||||||||||| |||||||||||    
T  11252037 acacaacacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgcttcatag 11252095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 34910309 - 34910363
Alignment:
Q  16 gacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||| || |||||||| |||||||||||||||||||||||| |||||| |||||    
T  34910309 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattaca 34910363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 5407294 - 5407199
Alignment:
Q  36 aatttgaaaaaatcacataattaagtgtagttacacac---gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||| |||||||||||||| | |||| ||| | ||   |||||||||||||| |||| ||||||||||| | | |||||||| ||||||||||    
T  5407294 aatttgagaaaatcacataattcattgtaattatagacacagacacgtgtccgacgccaggacacgcctaatccaaagagtgtccatgcttcatag 5407199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 14216869 - 14216938
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||||||  | |||||||| ||||||| |||| |||| |||||| |||||| |||||    
T  14216869 cacgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattaca 14216938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 14222998 - 14223067
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||||||  | |||||||| ||||||| |||| |||| |||||| |||||| |||||    
T  14222998 cacgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattaca 14223067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 15796376 - 15796307
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||| |||||| || |||||  | ||||||||||||||||| |||||| |||||| |||||    
T  15796376 cacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattaca 15796307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 26492287 - 26492218
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||| || ||| | || ||||||||||||||||| | |||| |||||| |||||    
T  26492287 cacgacacggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattaca 26492218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 1389908 - 1389956
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    |||||||||||||| ||| ||||||| | ||||||||||||||||||||    
T  1389908 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 1389956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 4990946 - 4990910
Alignment:
Q  94 acacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    ||||||||||| |||||||||||||||||||||||||    
T  4990946 acacgcctaatccgaggagtgtccgtgcttcatagct 4990910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 10955013 - 10955075
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgagg---agtgtccgtgcttcatagc 129  Q
    ||||||||||||||||||||  | ||||||||||| |||||   |||||||||||||||||||    
T  10955013 acacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 10955075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 15796281 - 15796221
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    |||| |||||||||| ||||| ||||||||||||| | | |||||| ||||||||||||||    
T  15796281 acacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttcatagct 15796221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 20503451 - 20503511
Alignment:
Q  10 gacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||| || |||||||  ||||||||||||||| |||||||| |||||| |||||    
T  20503451 gacactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattaca 20503511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 28918064 - 28918120
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    ||||||||||||||||||||  | ||||||||||| | |||||||||| ||||||||    
T  28918064 acacgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3164107 - 3164044
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    ||||||||||||| || |||  | ||||| || |||||||||||||||||||||||| ||||||    
T  3164107 cacgacacggacaatggcacgtcgacacagctaataatttgaaaaaatcacataattcagtgta 3164044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 5441026 - 5440967
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacg-cctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| ||||| |||||   ||||| ||||||||||||||||||||||||||||||    
T  5441026 acacgacacatgtccaacaccgagacacggcctaattcgaggagtgtccgtgcttcatag 5440967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 14979158 - 14979221
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    ||||||| ||||| || ||| || ||||| || |||||||||||||||||||||||| ||||||    
T  14979158 cacgacaaggacaatggcacgccgacacagctaataatttgaaaaaatcacataattcagtgta 14979221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 21479104 - 21479163
Alignment:
Q  10 gacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttac 69  Q
    ||||||||||| || ||||| || ||||||||||||||||||| |||| |||||| ||||    
T  21479104 gacactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaattac 21479163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 40052318 - 40052365
Alignment:
Q  10 gacactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    ||||||||||| || ||||| || ||||||||||||||||||||||||    
T  40052318 gacactgacacgccgacacagctaataatttgaaaaaatcacataatt 40052365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 4201406 - 4201436
Alignment:
Q  34 ataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||||||||||||||||||||||||||    
T  4201406 ataatttgaaaaaatcacataattaagtgta 4201436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 8842414 - 8842448
Alignment:
Q  94 acacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||| |||||||||||||||||||||||    
T  8842414 acacgcctaatccgaggagtgtccgtgcttcatag 8842448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 12704639 - 12704597
Alignment:
Q  80 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgct 122  Q
    ||||||||||||||||||| ||||| | |||||||||||||||    
T  12704639 tgtccgacaccagaacacgtctaatcctaggagtgtccgtgct 12704597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 14209105 - 14209159
Alignment:
Q  16 gacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||| || |||||||| ||||||| |||||||||||||||| |||||| |||||    
T  14209105 gacacgccgacacaactaataattttaaaaaatcacataattcagtgtaattaca 14209159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 25775493 - 25775555
Alignment:
Q  9 ggacactgacacaccaacacaactcataatttgaaaa-aatcacataattaagtgtagttaca 70  Q
    |||||||||||| ||||||||  | |||||||||||| |||||||||||| |||||| |||||    
T  25775493 ggacactgacacgccaacacatttaataatttgaaaataatcacataattcagtgtaattaca 25775555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 28812587 - 28812645
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||| || ||||||||| ||| ||||||||||| ||||||||||| |||| ||||||    
T  28812587 acacgatacatgtccgacagcaggacacgcctaatccgaggagtgtctgtgcctcatag 28812645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 49651774 - 49651716
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| | ||||||||| | |||| |||||| |||| ||||||||||||||||||    
T  49651774 acacgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgcttcatag 49651716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 750701 - 750644
Alignment:
Q  1 cacgacacggacact-gacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    ||||||||||||||| |||||  | |||||||| |||||||||||| |||||||||||    
T  750701 cacgacacggacacttgacacggcgacacaactaataatttgaaaatatcacataatt 750644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 1509540 - 1509585
Alignment:
Q  25 acacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||| || |||||||||||||||||||||||| |||||| |||||    
T  1509540 acacagctaataatttgaaaaaatcacataatttagtgtaattaca 1509585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 3865635 - 3865586
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacat 53  Q
    ||||||||||||||||| || ||||| || |||||||||||||| |||||    
T  3865635 gacacggacactgacacgccgacacagctaataatttgaaaaaaccacat 3865586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 4466589 - 4466540
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||  | ||||| || ||||||||||||||||||||||||||    
T  4466589 gtgtccgacactgggacacggcttattcgaggagtgtccgtgcttcatag 4466540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 127
Target Start/End: Complemental strand, 8789522 - 8789489
Alignment:
Q  94 acacgcctaattcgaggagtgtccgtgcttcata 127  Q
    ||||||||||| ||||||||||||||||||||||    
T  8789522 acacgcctaatccgaggagtgtccgtgcttcata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 10318113 - 10318064
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacat 53  Q
    ||||||||||||||||| || ||||| || ||||||||||||| ||||||    
T  10318113 gacacggacactgacacgccgacacagctaataatttgaaaaagtcacat 10318064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 14216964 - 14217021
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    ||||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||    
T  14216964 acacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 14223093 - 14223150
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    ||||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||    
T  14223093 acacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 14747547 - 14747608
Alignment:
Q  10 gacactgacacaccaacacaactcataatttg-aaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||| || ||||| || |||||||| |||||||||||||||| |||||| |||||    
T  14747547 gacactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaattaca 14747608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 26508111 - 26508156
Alignment:
Q  25 acacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||| || |||||||||||||||||||||||| |||||| |||||    
T  26508111 acacagctaataatttgaaaaaatcacataattcagtgtaattaca 26508156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 26665205 - 26665242
Alignment:
Q  78 cgtgtccgacaccagaacacgcctaattcgaggagtgt 115  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  26665205 cgtgtccgacaccagaacacccctaattcaaggagtgt 26665242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41961732 - 41961663
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||| ||||||||||| ||  ||||||| |||||||||||| ||||||| |||  ||||| |||||    
T  41961732 cacgacacagacactgacacgccgtcacaactaataatttgaaaatatcacattattcggtgtaattaca 41961663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 1509637 - 1509681
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgctt 123  Q
    |||||||||||| | |||||||||||  |||||||||||||||||    
T  1509637 gtgtccgacaccggtacacgcctaatcggaggagtgtccgtgctt 1509681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 3610610 - 3610678
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttac 69  Q
    |||||||| ||||||||||| ||||||||  | ||||||| ||||||| |||||| | |||||| ||||    
T  3610610 cacgacacagacactgacacgccaacacagttaataatttaaaaaaataacataactcagtgtaattac 3610678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 13807229 - 13807273
Alignment:
Q  84 cgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||| || ||| ||||||||||||||||||||||| |||||||    
T  13807229 cgacactaggacatgcctaattcgaggagtgtccgtgtttcatag 13807273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 17276792 - 17276848
Alignment:
Q  74 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    |||||||||||||||||   || | |||||| |||| ||||||||||||||||||||    
T  17276792 gacacgtgtccgacaccgagacgcacctaatccgagaagtgtccgtgcttcatagct 17276848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 18427012 - 18427068
Alignment:
Q  72 acgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||| |||| | |||| ||||||  |||||||||||||| |||||||    
T  18427012 acgacacgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcatag 18427068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 25948966 - 25948906
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    ||||||||||||||||  || | ||  || |||||||||||||||||||||||| ||||||    
T  25948966 gacacggacactgacatgccgatacggctaataatttgaaaaaatcacataattcagtgta 25948906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 29508424 - 29508484
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||| ||||| ||||||||| | || ||| ||||||||||||||||| |||||| ||||||    
T  29508424 gacatggacattgacacaccgataccactaataatttgaaaaaatcatataattcagtgta 29508484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 9e-21; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 36450833 - 36450692
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca---------------cacgacacgtgtccgaca 88  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||||| |||| |||||| |||||               |||||| |||||||||||    
T  36450833 gacacggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcggacacgacgcgtgtccgaca 36450734  T
Q  89 ccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    |||| ||||||||||| ||||||||||| |||||||||||||    
T  36450733 ccaggacacgcctaatccgaggagtgtctgtgcttcatagct 36450692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 14134760 - 14134820
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||    
T  14134760 acacgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtttcatagct 14134820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 183 - 317
Target Start/End: Original strand, 11064995 - 11065129
Alignment:
Q  183 atacctgagaagcaaggagaacagcatctctatccaaatagagagtaaagtgactagtaagactaaaactaccagtgagccattttcctgctggaacata 282  Q
    |||||||||||||||| |||||||||||| | |  | ||| ||||| ||||||||  |||||||||| || ||||| ||||||||||| || ||||||||    
T  11064995 atacctgagaagcaagaagaacagcatctttgtgtagataaagagtgaagtgacttataagactaaagctcccagtaagccattttccagcaggaacata 11065094  T
Q  283 cagctgagaaccaccttgagaaccatactgactca 317  Q
    ||  ||||| || |||| |||| ||| ||||||||    
T  11065095 caattgagaccctccttcagaagcattctgactca 11065129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 126
Target Start/End: Original strand, 44067596 - 44067644
Alignment:
Q  78 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44067596 cgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 44067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 6065644 - 6065585
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    ||||||||| ||||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  6065644 acacgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcatagc 6065585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 124
Target Start/End: Original strand, 5813653 - 5813707
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttc 124  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||||||||||||    
T  5813653 acacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 18407780 - 18407838
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| |||||||||| || |||||||||||| ||||||||||||||||||||||    
T  18407780 acacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcatag 18407838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 15816205 - 15816148
Alignment:
Q  7 acggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||||||||| || |||||||| |||||||||||||||||||||||| ||||||    
T  15816205 acggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgta 15816148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22651953 - 22652009
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    |||||||||||||||||||| || ||||| || ||||||||||||||||||||||||    
T  22651953 cacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatt 22652009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 22652048 - 22652108
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    |||||||| |||||||||||| | ||||| ||||| |||||||||||||||||||||||||    
T  22652048 acacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatagct 22652108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 8343388 - 8343446
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||||||| | ||||||||||| ||| ||||||| |||||||||||    
T  8343388 acacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 21465484 - 21465546
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctca 132  Q
    ||||||||||||||| ||||  | | |||||||||| ||||||||||||||||||||||||||    
T  21465484 acacgacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgcttcatagctca 21465546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 29510291 - 29510233
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||| ||||||||||||| | |||| |||||| |||||||||||||||||||||||    
T  29510291 acacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 29510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 3951534 - 3951469
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctcagaa 135  Q
    |||||||||||||| |||||  ||||||||||||| | |||||| |||||||||||||||| ||||    
T  3951534 acacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcatagcttagaa 3951469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 8343293 - 8343362
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||| ||||| |||||||| ||| | || |||||||||||||||||||||||| |||||| |||||    
T  8343293 cacgacactgacaccgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattaca 8343362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 20873046 - 20873115
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||| || ||| |  | |||||||||||||||||||||||| |||||| |||||    
T  20873046 cacgacacggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattaca 20873115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 22197824 - 22197755
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||| |||||| |||| |||||||| || ||||||||||||| |||||||||| |||||| |||||    
T  22197824 cacgacacagacactaacacgccaacacagctaataatttgaaaaattcacataatttagtgtaattaca 22197755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 29447097 - 29447040
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    |||||||| ||||| |||||||| ||||||||||| | ||||||||||||||||||||    
T  29447097 acacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29510386 - 29510317
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||| || ||||| || ||||||||||||||||||| |||| ||| || |||||    
T  29510386 cacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattaca 29510317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 15816116 - 15816056
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    ||||||||||  ||||||||| | ||||||||||| |||| ||||||||||||||||||||    
T  15816116 acacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagct 15816056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 127
Target Start/End: Original strand, 3658224 - 3658271
Alignment:
Q  80 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    ||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  3658224 tgtccgacatcaagacacgcctaattcgaggagtgtccgtgcttcata 3658271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 22197725 - 22197671
Alignment:
Q  74 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||| || ||||||||||  ||||||||||||||||| ||||    
T  22197725 gacacgtgtccgacaccggatcacgcctaatctgaggagtgtccgtgctttatag 22197671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 22943347 - 22943301
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtc 116  Q
    ||||||||||||||||||||| | ||||||||||| |||||||||||    
T  22943347 acacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 24613509 - 24613566
Alignment:
Q  12 cactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||| ||||| || |||||||||||| |||||||||||||||||| |||||    
T  24613509 cactgacacaccgacacagctaataatttgaaaa-atcacataattaagtgtaattaca 24613566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2572138 - 2572069
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||| || |||||  | ||||| || |||||||||||||||||||||||| |||||| |||||    
T  2572138 cacgacacggataccgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaattaca 2572069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 13437043 - 13436990
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    |||| |||||||||||| || ||||| || ||||||||||||||||||||||||    
T  13437043 gacatggacactgacacgccgacacagctaataatttgaaaaaatcacataatt 13436990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18170564 - 18170495
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||| || |||||| | | ||||||||||||| |||||||| | |||| |||||    
T  18170564 cacgacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattaca 18170495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18634132 - 18634063
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||| || |||||| | | ||||||||||||| |||||||| | |||| |||||    
T  18634132 cacgacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattaca 18634063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 135
Target Start/End: Original strand, 29447516 - 29447581
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctcagaa 135  Q
    |||||||| |||||||||||| | ||| | |||||  |||||||||||||||||||||| ||||||    
T  29447516 acacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcatagatcagaa 29447581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 3677763 - 3677819
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    ||||||||||| ||||||||| | |||||| | ||||||| ||||||||||||||||    
T  3677763 cacgacacggatactgacacatcgacacaattaataattttaaaaaatcacataatt 3677819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 11803333 - 11803389
Alignment:
Q  72 acgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||| ||||||||||  | ||||| ||||| |||||||||||||||||||||||    
T  11803333 acgacacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgcttcatag 11803389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 13397622 - 13397670
Alignment:
Q  80 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||   ||||||||||||| |||||||||||||||||||||    
T  13397622 tgtccgacaccgagacacgcctaattcaaggagtgtccgtgcttcatag 13397670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 80 - 127
Target Start/End: Complemental strand, 24205796 - 24205749
Alignment:
Q  80 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    |||| |||||| ||||||||||||| ||||||||||||||| ||||||    
T  24205796 tgtctgacaccggaacacgcctaatccgaggagtgtccgtgtttcata 24205749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 24727735 - 24727684
Alignment:
Q  74 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttca 125  Q
    ||||||||||| | ||||||||||||||||| |||| ||||| |||||||||    
T  24727735 gacacgtgtccaataccagaacacgcctaatccgagaagtgttcgtgcttca 24727684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 31514939 - 31514974
Alignment:
Q  94 acacgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    ||||||||||| ||||||||||||||||||||||||    
T  31514939 acacgcctaatccgaggagtgtccgtgcttcatagc 31514974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 40332252 - 40332307
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttca 125  Q
    ||||||||||||||| ||||| | || |||||||| ||||||||||||||| ||||    
T  40332252 acacgacacgtgtcccacaccgggacgcgcctaatccgaggagtgtccgtgtttca 40332307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 41831933 - 41831874
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    |||||| |||| ||||||| ||| ||||| |||||||||||||||||| | |||||||||    
T  41831933 acacgatacgtatccgacaacaggacacgtctaattcgaggagtgtccattcttcatagc 41831874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 4673400 - 4673354
Alignment:
Q  82 tccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| ||||||||||||| | ||||||||| |||||||||||    
T  4673400 tccgacaccggaacacgcctaatccaaggagtgtctgtgcttcatag 4673354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 12570496 - 12570438
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||| |||||||||||||||||| |||||||||||  || || ||||||||||| ||||    
T  12570496 acactacacgtgtccgacaccaggacacgcctaatctgaagattgtccgtgctttatag 12570438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 12570722 - 12570664
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||| |||||||||||||||||| |||||||||||  || || ||||||||||| ||||    
T  12570722 acactacacgtgtccgacaccaggacacgcctaatctgaagattgtccgtgctttatag 12570664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 24196678 - 24196628
Alignment:
Q  2 acgacacggacactgacacaccaacacaactcataatttgaaaaaatcaca 52  Q
    |||| |||||||| ||||| || |||||||| |||||||||||||||||||    
T  24196678 acgatacggacaccgacacgccgacacaactaataatttgaaaaaatcaca 24196628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 28745570 - 28745632
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctca 132  Q
    ||||||||| |||||| ||||   ||| | ||||||| |||||||||||||||||||||||||    
T  28745570 acacgacacctgtccgtcaccgagacaagtctaattcaaggagtgtccgtgcttcatagctca 28745632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 30271366 - 30271304
Alignment:
Q  8 cggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||| || ||||| || || ||||||||||||||||||||  |||||| |||||    
T  30271366 cggacactgacacgccgacacagctaatcatttgaaaaaatcacataatgcagtgtaattaca 30271304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 31557057 - 31557115
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| ||||||||||||| ||||||||||| | ||| |||||| ||| ||||||    
T  31557057 acacgacacatgtccgacaccaggacacgcctaatccaaggtgtgtccatgcctcatag 31557115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 34451019 - 34450961
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||| |||||  | |||||||| || | |||||||||||||||||||||    
T  34451019 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 34450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 131
Target Start/End: Original strand, 39820493 - 39820550
Alignment:
Q  73 cgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctc 131  Q
    |||| ||||||||||||  || |||||||||| |||| |||||||||||||||||||||    
T  39820493 cgacgcgtgtccgacacggga-cacgcctaatccgagaagtgtccgtgcttcatagctc 39820550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 926783 - 926730
Alignment:
Q  73 cgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    |||||||||||||||||| | ||| || | || |||||||||||||||||||||    
T  926783 cgacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcat 926730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 4673507 - 4673438
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||| ||||||||||| || |||||  | ||||||||||||||||| | |||| |||||| |||||    
T  4673507 cacgacacagacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaattaca 4673438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 4948657 - 4948698
Alignment:
Q  29 aactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||| |||||||||||||||||||||||| |||||| |||||    
T  4948657 aactaataatttgaaaaaatcacataattcagtgtaattaca 4948698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 8343037 - 8343086
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||| | ||||||||||| ||| ||||||| |||||||||||    
T  8343037 gtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 17751730 - 17751775
Alignment:
Q  83 ccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||| | ||||||||||| ||||||||||||| |||||||||    
T  17751730 ccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17751775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 17760717 - 17760762
Alignment:
Q  83 ccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||| | ||||||||||| ||||||||||||| |||||||||    
T  17760717 ccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17760762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 25566842 - 25566887
Alignment:
Q  25 acacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||| || |||||||||||||||||||||||| |||||| |||||    
T  25566842 acacagctaataatttgaaaaaatcacataattcagtgtaattaca 25566887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 30077461 - 30077400
Alignment:
Q  9 ggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||| ||||| ||||| || || |||||||||||| ||||||||||| |||||| |||||    
T  30077461 ggacacggacacgccaacgcagctaataatttgaaaacatcacataattcagtgtaattaca 30077400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41838205 - 41838144
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtg 62  Q
    ||||| ||||||||||||||  | ||||| || ||||||| |||||||||||||||| ||||    
T  41838205 cacgatacggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 41838144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 926870 - 926822
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatc 49  Q
    |||||||||||||||||||| |||||||  || ||||||||| ||||||    
T  926870 cacgacacggacactgacacgccaacactcctaataatttgagaaaatc 926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 3025612 - 3025668
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    |||||||||||||| |||||    ||||| ||||| |||||||||||||||||||||    
T  3025612 acacgacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 4122236 - 4122176
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    |||||||||||||  |||||| ||||||| ||||| | | ||||||||||||||| |||||    
T  4122236 acacgacacgtgttggacaccggaacacgtctaatccaaagagtgtccgtgcttcgtagct 4122176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 8342982 - 8343018
Alignment:
Q  34 ataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||||||| |||||| |||||    
T  8342982 ataatttgaaaaaatcacataatttagtgtaattaca 8343018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 13403177 - 13403225
Alignment:
Q  80 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||   |||||| |||||| |||||||||||||||||||||    
T  13403177 tgtccgacaccgagacacgcttaattcaaggagtgtccgtgcttcatag 13403225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 25192429 - 25192373
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    ||||| |||||||||||||| || ||||| || ||||||||||||| | ||||||||    
T  25192429 cacgatacggacactgacacgccgacacagctaataatttgaaaaagtgacataatt 25192373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 9e-21; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 48450669 - 48450548
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttacacacgacacgtgtccgacaccagaacacgcc 100  Q
    |||||||||||||||||||| |||||||| || ||||||||||||||| |||||||| |||||| ||       ||| ||||| |||| ||| ||||| |    
T  48450669 cacgacacggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaatt-------acaagtgtcggaca-caggacacgtc 48450578  T
Q  101 taattcgaggagtgtccgtgcttcatagct 130  Q
    |||| |||||||||||||||||||||||||    
T  48450577 taatccgaggagtgtccgtgcttcatagct 48450548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 40917821 - 40917884
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctcag 133  Q
    ||||||||||||||||||||| | ||||||||||| |||||| |||||||||||||||| ||||    
T  40917821 acacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcataggtcag 40917884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 9828116 - 9828174
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||    
T  9828116 acacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 9828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 18471356 - 18471414
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||||||| ||||||||    
T  18471356 acacgacacgtgtccgacaccgaaacacacctaattcgaggagtgtccgtacttcatag 18471414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 128
Target Start/End: Complemental strand, 46940834 - 46940748
Alignment:
Q  42 aaaaaatcacataattaagtgtagttacacacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||| ||||||||||||||| |||||     | ||||||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  46940834 aaaaaataacataattaagtgtaattacaagtttcgcgtgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcatag 46940748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 40258931 - 40258874
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  40258931 acacgacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 1486702 - 1486646
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||||| |||||||||    
T  1486702 acacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 16297279 - 16297223
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    |||||||  |||||||||||||| ||||||||||| |||||||||||||||||||||    
T  16297279 acacgacgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 22881689 - 22881629
Alignment:
Q  10 gacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||| || |||||||| |||||||||||||||||||||||| |||||| |||||    
T  22881689 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattaca 22881629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 398847 - 398784
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||||||||||||||| || ||||  || |||||||||||||||||||||||| ||||||    
T  398847 cacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgta 398784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 34298413 - 34298476
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    ||||||||||| ||||||||||| |||| ||| ||||||||| |||||||||||||| ||||||    
T  34298413 cacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgta 34298476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 6427536 - 6427594
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||||||| | |||||||||||  || |||||||||||||||||||    
T  6427536 acacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatag 6427594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 30359374 - 30359428
Alignment:
Q  10 gacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    ||||||||||||||  ||||||| |||||||||||||||||||||||| ||||||    
T  30359374 gacactgacacaccggcacaactgataatttgaaaaaatcacataatttagtgta 30359428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 37598892 - 37598950
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||||||||   | ||||||||||| |||||||||||||||||||||||    
T  37598892 acacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatag 37598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 46348462 - 46348396
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||| || ||||| || ||||||||||||||||| |||||| |||||| |||||    
T  46348462 gacacggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattaca 46348396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 29144369 - 29144320
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  29144369 gtgtccgacaccggaacacgcctaatccgaagagtgtccgtgcttcatag 29144320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 31672969 - 31672908
Alignment:
Q  9 ggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||| ||||| || |||||||||||||||||| ||||| |||||| |||||    
T  31672969 ggacactgacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaattaca 31672908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 1705068 - 1705005
Alignment:
Q  7 acggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||| |||||||| ||||| || |||||||||||||||||||||||| || ||| |||||    
T  1705068 acggacaccgacacaccgacacatctaataatttgaaaaaatcacataattcagggtaattaca 1705005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 25452155 - 25452108
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    ||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  25452155 gtgtcagacaccggaacacgcctaattcgagcagtgtccgtgcttcat 25452108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 42359438 - 42359391
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    |||||||||||| | ||||||||||| |||||||||||||||||||||    
T  42359438 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 1486790 - 1486728
Alignment:
Q  2 acgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||||| |||||||| |  ||||| || |||||||||||||||||||||||| ||||||    
T  1486790 acgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgta 1486728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 2218297 - 2218347
Alignment:
Q  78 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||| || |||||||||||  ||||||||||||||||||||||    
T  2218297 cgtgtccgacactaggacacgcctaatctgaggagtgtccgtgcttcatag 2218347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 5898264 - 5898206
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||| ||||| | ||||| ||||| |||||||||||||||||| ||||    
T  5898264 acacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctttatag 5898206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 13011298 - 13011228
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaa-tcacataattaagtgtagttaca 70  Q
    ||||||||| |||||||||  || ||||| || |||||||||||||| ||||||||||||||||| |||||    
T  13011298 cacgacacgaacactgacatgccgacacagctaataatttgaaaaaaatcacataattaagtgtaattaca 13011228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 16812523 - 16812581
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtg 62  Q
    |||||||||||||||||||| |||| | | ||||||||| |||||||||||||| ||||    
T  16812523 gacacggacactgacacaccgacaccaataataatttgacaaaatcacataattcagtg 16812581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 18337390 - 18337452
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctca 132  Q
    |||| |||||||||||||||  | ||| |||| || |||||||||||||||||||||||||||    
T  18337390 acacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcatagctca 18337452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 18556535 - 18556469
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||| || ||||| || |||||||||||| ||||||||||| | |||| |||||    
T  18556535 gacacggacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattaca 18556469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 22515885 - 22515827
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| | |||||||||   ||||||||||| |||||||||||||||||||||||    
T  22515885 acacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 28663677 - 28663715
Alignment:
Q  89 ccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  28663677 ccagaacacgcctaattcgaggagtgtctgtgcttcata 28663715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 35702661 - 35702533
Alignment:
Q  10 gacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttacacacgacacgtgtccgacacca--gaacacgcctaattcg 107  Q
    ||||||||||  || ||||| || ||||||||||||  ||| ||||||||||||| |||||   | || ||||| ||||| |  | ||||||||||| ||    
T  35702661 gacactgacatgccgacacagctaataatttgaaaacttcaaataattaagtgtaattacaagtgtca-gtgtcggacacgatgggacacgcctaatccg 35702563  T
Q  108 aggagtgtccgtgcttcatagctcagaagt 137  Q
    ||||||||||||||||||||| | ||||||    
T  35702562 aggagtgtccgtgcttcatagttaagaagt 35702533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 40917728 - 40917795
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||| |||||||| || ||||| || ||||||||||||||||||  ||||||||||| |||||    
T  40917728 cacgacacggatactgacacgccgacacagctaataatttgaaaaaatcac--aattaagtgtaattaca 40917795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 46348381 - 46348323
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||||||||||   |||||||| || ||||| |||||||||||||||||    
T  46348381 acacgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatag 46348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 47989569 - 47989627
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| |||| |||| | | ||||||||||| |||||||||||||||||||||||    
T  47989569 acacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5927422 - 5927353
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||| | |||||  || ||||||||||||||||| |||||| | |||| |||||    
T  5927422 cacgacacggacactgacacgctaacactgctaataatttgaaaaaatcatataatttaatgtaattaca 5927353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21378555 - 21378624
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||  |||||||| ||||| || |||| |||||||||| |||||||| |||||| |||||    
T  21378555 cacgacacggacatggacacaccgacacagctaataaattgaaaaaattacataattcagtgtaattaca 21378624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 24577244 - 24577199
Alignment:
Q  25 acacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||    
T  24577244 acacaactaataatttgaaaaaatcacataattcagtgtaattaca 24577199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31015020 - 31015089
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||| ||||||| | || ||||| || ||||||||| |||||||||||||| |||||| |||||    
T  31015020 cacgacacgggcactgacgcgcctacacagctaataatttgagaaaatcacataattcagtgtaattaca 31015089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 40285728 - 40285671
Alignment:
Q  9 ggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagt 66  Q
    ||||||||||||||||||||  || ||||||||| |||||| ||||||| ||||||||    
T  40285728 ggacactgacacaccaacaccgctaataatttgagaaaatcgcataattcagtgtagt 40285671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 42359527 - 42359462
Alignment:
Q  5 acacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||| |  ||||| || ||||||||||||||||||| |||| |||||| |||||    
T  42359527 acacggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattaca 42359462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 47989475 - 47989543
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||| ||||||||||| || |||||| | ||||||| |||||||||||||||| |||||| |||||    
T  47989475 cacgacacagacactgacacgccgacacaa-taataatttaaaaaaatcacataattcagtgtaattaca 47989543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 48040544 - 48040412
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaa-tcacataattaagtgtagttacacacgaca--cgtgtccgacaccagaacac 97  Q
    |||||||||||||||||||| || |||||  | |||||||||||||  ||||||| || ||||||  ||||   | |   ||||||||||||  | ||||    
T  48040544 cacgacacggacactgacacgccgacacagataataatttgaaaaaggtcacatattttagtgtaaatacaagtgtcggtcgtgtccgacactgggacac 48040445  T
Q  98 gcctaattcgaggagtgtccgtgcttcatagct 130  Q
    |||||||| |||||||||||||||||| |||||    
T  48040444 gcctaattggaggagtgtccgtgcttcgtagct 48040412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 48547970 - 48547937
Alignment:
Q  96 acgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    ||||||||||||||||||||||||||||||||||    
T  48547970 acgcctaattcgaggagtgtccgtgcttcatagc 48547937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 113289 - 113345
Alignment:
Q  14 ctgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||| || ||||| || |||||||||||||||||||||||| |||||| |||||    
T  113289 ctgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattaca 113345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 2896199 - 2896139
Alignment:
Q  5 acacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtag 65  Q
    |||||||||||||||| || ||||  || ||||||||| |||||||||||||| |||||||    
T  2896199 acacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtag 2896139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6427327 - 6427383
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    |||| ||||||||||||||| |||||||  || ||||||||| ||||||||||||||    
T  6427327 cacggcacggacactgacacgccaacaccgctaataatttgagaaaatcacataatt 6427383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 10233326 - 10233374
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    |||||||||||||| |||| ||||||  |||||||||||||||||||||    
T  10233326 gtgtccgacaccaggacacacctaatcagaggagtgtccgtgcttcata 10233374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 15323233 - 15323289
Alignment:
Q  74 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    |||||||||||||||||  ||||| |||||| ||||||||||| ||| |||||||||    
T  15323233 gacacgtgtccgacaccgaaacacacctaatccgaggagtgtcagtgtttcatagct 15323289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 22515964 - 22515900
Alignment:
Q  6 cacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||| ||||| |  ||||| || |||||||||||||||||||||||| |||||| |||||    
T  22515964 cacggacacggacacgcagacacagctaataatttgaaaaaatcacataatttagtgtaattaca 22515900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 31694683 - 31694639
Alignment:
Q  84 cgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||| |||||||||||||  ||||||||||||||||||||||    
T  31694683 cgacaccggaacacgcctaatctgaggagtgtccgtgcttcatag 31694639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 37598816 - 37598860
Alignment:
Q  8 cggacactgacacaccaacacaactcataatttgaaaaaatcaca 52  Q
    ||||||||||||| || |||||||| |||||||||||||||||||    
T  37598816 cggacactgacacgccgacacaactaataatttgaaaaaatcaca 37598860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 42004929 - 42004882
Alignment:
Q  80 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||| | |||||||||||||||| |||||||||||||||||||    
T  42004929 tgtccgacacta-aacacgcctaattcgaagagtgtccgtgcttcatag 42004882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 1815240 - 1815303
Alignment:
Q  7 acggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||| || |||||| | || |||| |||||||||||||||| |||||| |||||    
T  1815240 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattaca 1815303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 85 - 128
Target Start/End: Complemental strand, 7918197 - 7918154
Alignment:
Q  85 gacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||| |||| |||||| |||||||||||||||||||||||    
T  7918197 gacaccaggacacacctaatccgaggagtgtccgtgcttcatag 7918154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 9033085 - 9033026
Alignment:
Q  6 cacggacactgacacaccaacacaactcataatttgaa-aaaatcacataattaagtgta 64  Q
    |||||||||||||||  |||||| ||| |||||||||| |||||||||||||| ||||||    
T  9033085 cacggacactgacacgtcaacaccactaataatttgaaaaaaatcacataattcagtgta 9033026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 18556440 - 18556385
Alignment:
Q  73 cgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||| ||||||||  | ||||||||||| |||| ||||||||||||||||||    
T  18556440 cgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 18556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 85 - 128
Target Start/End: Original strand, 22947806 - 22947849
Alignment:
Q  85 gacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||| | ||||||||||| |||||||||||||||||||||||    
T  22947806 gacacctggacacgcctaatccgaggagtgtccgtgcttcatag 22947849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 32434792 - 32434729
Alignment:
Q  8 cggacactgacac-accaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||| ||| |||||||| ||||||||||||| |||||||||| | |||| |||||    
T  32434792 cggacactgacaccaccgacacaactaataatttgaaaaagtcacataattcattgtaattaca 32434729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 32461451 - 32461392
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    |||||||||||||| |||||  | ||||||||||| | || |||||||||||||||||||    
T  32461451 acacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcatagc 32461392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 40258997 - 40258946
Alignment:
Q  19 acaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||| |||||| | |||||||||||||||||||||||| |||||| |||||    
T  40258997 acaccgacacaattaataatttgaaaaaatcacataattcagtgtaattaca 40258946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 1815318 - 1815376
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| ||||||||||| | |||||||||||  |||||||| ||||| |||||||    
T  1815318 acacgacacatgtccgacaccgggacacgcctaatctgaggagtgaccgtgattcatag 1815376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 5944355 - 5944413
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||| |||| ||||||||||| | | ||||||||| |||||||||| ||||||||||||    
T  5944355 acacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcatag 5944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 9449080 - 9449034
Alignment:
Q  11 acactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    |||| ||||||||||||| | | ||||||||||||||||||||||||    
T  9449080 acacagacacaccaacaccattaataatttgaaaaaatcacataatt 9449034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 17754289 - 17754351
Alignment:
Q  2 acgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    ||||||| ||| |||||||||| ||||  || ||||||||||||||| |||||||| ||||||    
T  17754289 acgacacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgta 17754351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 21366026 - 21365992
Alignment:
Q  94 acacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||| |||||||||||||||||||||||    
T  21366026 acacgcctaatccgaggagtgtccgtgcttcatag 21365992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 22794066 - 22794016
Alignment:
Q  80 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    |||||||| || | |||| ||||||||||||||||| ||||||||||||||    
T  22794066 tgtccgactccgggacacacctaattcgaggagtgtacgtgcttcatagct 22794016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 34712377 - 34712323
Alignment:
Q  74 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||| ||||  | ||||| ||||||| |||||||||||||||||||||    
T  34712377 gacacgtgtcctacactgggacacgtctaattcaaggagtgtccgtgcttcatag 34712323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 38078659 - 38078601
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| ||| | ||||||| ||||||||||| |||||||| | ||||||||||||    
T  38078659 acacgacacatgttcaacaccaggacacgcctaatccgaggagtattcgtgcttcatag 38078601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 38078740 - 38078674
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||| ||||||||||  | ||||| || |||||||||||||||||||||||| | |||| |||||    
T  38078740 gacacgaacactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattaca 38078674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 6612253 - 6612184
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||| |||||| || | |||  | ||||||||||||||| |||||||| |||||| |||||    
T  6612253 cacgacacggacaatgacacgccgatacagttaataatttgaaaaaattacataattcagtgtaattaca 6612184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 9103624 - 9103673
Alignment:
Q  8 cggacactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    ||||||||||||| || |||||  | ||||||||||||||||||||||||    
T  9103624 cggacactgacacgccgacacagttaataatttgaaaaaatcacataatt 9103673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 127
Target Start/End: Complemental strand, 10572568 - 10572535
Alignment:
Q  94 acacgcctaattcgaggagtgtccgtgcttcata 127  Q
    ||||||||||||| ||||||||||||||||||||    
T  10572568 acacgcctaattcaaggagtgtccgtgcttcata 10572535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 14359603 - 14359535
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||| ||||| ||||| || ||||| || ||||||||| |||||||||||||| |||||| |||||    
T  14359603 cacgacacagacacggacacgccgacacagctaataatttga-aaaatcacataatttagtgtaattaca 14359535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 16164297 - 16164244
Alignment:
Q  75 acacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||||||| ||||||||||| ||| ||||||  ||| |||||||    
T  16164297 acacgtgtccgacaccaggacacgcctaatccgaagagtgtatgtgtttcatag 16164244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 17778617 - 17778670
Alignment:
Q  73 cgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    |||||||||||||||||| | ||| ||||||| |||| ||||| ||||||||||    
T  17778617 cgacacgtgtccgacaccgggacatgcctaatccgagaagtgttcgtgcttcat 17778670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 27965983 - 27965938
Alignment:
Q  85 gacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    |||||| | ||||||||||| |||||||||||| ||||||||||||    
T  27965983 gacaccgggacacgcctaatccgaggagtgtccatgcttcatagct 27965938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 52903316 - 52903365
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||| | ||||| || |||||| |||||||||||||||||||    
T  52903316 gtgtccgacaccgggacacggcttattcgaagagtgtccgtgcttcatag 52903365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1262861 - 1262917
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    ||||||||| |||| ||||| || ||||| || ||||||||| ||||||||||||||    
T  1262861 cacgacacgaacacggacacgccgacacagctaataatttgagaaaatcacataatt 1262917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9709797 - 9709853
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    |||||||||||||||||||  || ||||  || ||||||||| ||||||||||||||    
T  9709797 cacgacacggacactgacatgcctacaccgctaataatttgagaaaatcacataatt 9709853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 10233245 - 10233293
Alignment:
Q  16 gacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    ||||||||||||| ||| |||| |||| |||||||||||||| ||||||    
T  10233245 gacacaccaacaccactaataaattgagaaaatcacataattcagtgta 10233293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 10572671 - 10572615
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    ||||||| | |||||||||| || |||| ||| ||||||||| ||||||||||||||    
T  10572671 cacgacatgaacactgacacgccgacaccactaataatttgagaaaatcacataatt 10572615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 13011208 - 13011172
Alignment:
Q  86 acaccagaacacgcctaattcgaggagtgtccgtgct 122  Q
    |||||||||||| |||||| |||||||||||||||||    
T  13011208 acaccagaacacacctaatccgaggagtgtccgtgct 13011172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 18337339 - 18337375
Alignment:
Q  34 ataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||||||| |||||| |||||    
T  18337339 ataatttgaaaaaatcacataattcagtgtaattaca 18337375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 22881611 - 22881567
Alignment:
Q  84 cgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||| | ||||| ||||| |||||||||||||||||||||||    
T  22881611 cgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22881567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 32461520 - 32461476
Alignment:
Q  26 cacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||| |||||||||||||||||||||||| | |||| |||||    
T  32461520 cacaactaataatttgaaaaaatcacataatttaatgtaattaca 32461476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 36878551 - 36878587
Alignment:
Q  94 acacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    ||||||||||| | |||||||||||||||||||||||    
T  36878551 acacgcctaatcccaggagtgtccgtgcttcatagct 36878587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 36905982 - 36906030
Alignment:
Q  9 ggacactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    ||||||||||||||||||||  || ||||| ||| ||||||||||||||    
T  36905982 ggacactgacacaccaacaccgctaataatctgagaaaatcacataatt 36906030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 10770756 - 10770687
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||||    
T  10770756 cacgacatggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattaca 10770687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 34595111 - 34595253
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttac---------------acacgacacgtgtccg 85  Q
    ||||||||||||| |||||| || |||||||| |||||||||||||||||||||||| |||||| ||||               |||||||||||||| |    
T  34595111 cacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctg 34595210  T
Q  86 acaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||| | |||| |||||| |||||||||||||||||||||||    
T  34595211 acaccgggacacacctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 7938093 - 7938221
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttacacacgacacgtgtccgacaccagaacacgcc 100  Q
    ||||||| |||||||||||| || ||||| || ||||||||||||||||| |||||| |||||| ||| |   | |  ||||||||||||   |||||||    
T  7938093 cacgacatggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtc-ggtgtccgacaccgagacacgcc 7938191  T
Q  101 taattcgaggagtgtccgtgcttcatagct 130  Q
    | || |||||||||||||||||||||||||    
T  7938192 tgatccgaggagtgtccgtgcttcatagct 7938221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8777055 - 8776986
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||| || |||||||| ||||||||||||||||||| |||| |||||| |||||    
T  8777055 cacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattaca 8776986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 17841668 - 17841602
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||| || ||||| || |||||||||||||||||||||||| |||||| |||||    
T  17841668 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattaca 17841602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 31959139 - 31959268
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttacaca------cgacacgtgtccgacaccagaacac 97  Q
    |||||| |||||||||| ||  |||| || |||||||||||||||||||||||  |||||| |||||        ||||| |||||||||||| | ||||    
T  31959139 gacacgaacactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcggcgacatgtgtccgacaccgggacac 31959238  T
Q  98 gcctaattcgaggagtgtccgtgcttcata 127  Q
     |||||| ||||||||||||||||||||||    
T  31959239 acctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 426596 - 426527
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||| || |||||  | |||||||||||||||||||||||||| |||| |||||    
T  426596 cacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattaca 426527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 853941 - 853880
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtg 62  Q
    |||||||||||  ||||||| || |||||||| |||||||||||||||||||||||||||||    
T  853941 cacgacacggatgctgacacgccgacacaactaataatttgaaaaaatcacataattaagtg 853880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8365601 - 8365532
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||| || |||||||| |||||||||||| |||||||||||  ||||| |||||    
T  8365601 cacgacacggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattaca 8365532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 12696301 - 12696370
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||| || ||||| || ||||||||||||||| |||||||| |||||| |||||    
T  12696301 cacgacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattaca 12696370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16766674 - 16766743
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||| |||||||||||| || ||||| || |||||||||||||||||||||||| |||||| |||||    
T  16766674 cacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattaca 16766743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16833285 - 16833354
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||| ||||||||||| || |||||||| ||||||||||||||||||||| || |||||| |||||    
T  16833285 cacgacacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattaca 16833354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 9658935 - 9658998
Alignment:
Q  65 gttacacacgacacgtgtccgacaccagaacacgcctaatt-cgaggagtgtccgtgcttcata 127  Q
    |||| |||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||    
T  9658935 gttagacacgacacgtgtctgacaccggaacacgcctaattccaaggagtgtccgtgcttcata 9658998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 4878004 - 4878061
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| |||||||||| || ||||||||||| |||||||||||||||||||||||    
T  4878004 acacgacacatgtccgacac-aggacacgcctaatccgaggagtgtccgtgcttcatag 4878061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 8365506 - 8365448
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||||||  | ||||||||||| |||||||| ||||||||||||||    
T  8365506 acacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcatag 8365448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 8776966 - 8776908
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||||||||||   |||| |||||| |||||||||||||||||||||||    
T  8776966 acacgacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcatag 8776908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 17327648 - 17327590
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||| |||||  | ||||||||||| |||||||||||||||||||||||    
T  17327648 acacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 17327590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 28152159 - 28152217
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||||||| | ||| ||||||| |||||||||| ||||||||||||    
T  28152159 acacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 28715356 - 28715414
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||| ||||||| | |||||||||||||||| ||||| ||||||||||||    
T  28715356 acacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcatag 28715414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 7930368 - 7930413
Alignment:
Q  76 cacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgc 121  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||    
T  7930368 cacgtgtccgacaccaggacacgcctaattcgaggagtgttcgtgc 7930413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9107452 - 9107383
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||| |||| || ||||| || ||||||||||||||||||| |||| |||||| |||||    
T  9107452 cacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattaca 9107383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 31384991 - 31385048
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    ||||||||||||||| ||||| | ||||||||||| | ||||||||||||||||||||    
T  31384991 acacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 16766769 - 16766828
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    |||| |||||||||||||||| | ||||||||||| ||| || |||||||||||||||||    
T  16766769 acacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatagc 16766828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 3209460 - 3209518
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||| |||||||||| | ||||||||||| ||||||||||  |||||||||||    
T  3209460 acacgacacgcgtccgacacccggacacgcctaatccgaggagtgtttgtgcttcatag 3209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 10339112 - 10339054
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| ||||||||||  | |||||||||||  ||||||||||||||||||||||    
T  10339112 acacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 10339054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 24645542 - 24645600
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||||||||  ||||| ||||| ||| ||||||| |||||||||||    
T  24645542 acacgacacgtgtccgacaccaagacacgtctaatccgaagagtgtctgtgcttcatag 24645600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1681735 - 1681804
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||  ||||| |||| || |||||||| |||||||||||||||||| ||||| |||||| |||||    
T  1681735 cacgacacatacactaacacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaattaca 1681804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4877919 - 4877980
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaa-tcacataattaagt 61  Q
    ||||||||||| | ||||||||| ||||| || |||||||||||||| ||||||||||||||    
T  4877919 cacgacacggatagtgacacaccgacacagctaataatttgaaaaaagtcacataattaagt 4877980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 130
Target Start/End: Complemental strand, 7723234 - 7723197
Alignment:
Q  93 aacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    |||||||||||| |||||||||||||||||||||||||    
T  7723234 aacacgcctaatccgaggagtgtccgtgcttcatagct 7723197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 7977912 - 7977843
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||| ||| |||||||| || ||||| || ||||||||||||||| |||||||| |||||| |||||    
T  7977912 cacgacatggatactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattaca 7977843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 17841587 - 17841530
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    |||||||| |||||||||||    ||||||||||| ||||||||||||||||||||||    
T  17841587 acacgacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 1700406 - 1700454
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    ||||| |||||||||| ||||||||||| ||||||||||||| ||||||    
T  1700406 gtgtcggacaccagaatacgcctaattcaaggagtgtccgtgtttcata 1700454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 7265668 - 7265612
Alignment:
Q  8 cggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    ||||||||||||| |||||||  || ||||||||| |||||||||||||| ||||||    
T  7265668 cggacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgta 7265612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 26553816 - 26553864
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    ||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  26553816 gtgtctgacatcagaacacgcctaattcgaggagtgtatgtgcttcata 26553864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 3398596 - 3398658
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||||||||||||||| || ||||| || |||||||| |||||||| |||||| ||||||    
T  3398596 cacgacacggacactgacacgccgacacagctaataatttg-aaaaatcatataattcagtgta 3398658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 7801228 - 7801169
Alignment:
Q  11 acactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||| |||| || |||||||| |||||||||||||||||||||||| || ||| |||||    
T  7801228 acactaacacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattaca 7801169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 7930288 - 7930343
Alignment:
Q  7 acggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtg 62  Q
    |||||||||||||  || |||||| | |||||||||||||||||||||||| ||||    
T  7930288 acggacactgacatgccgacacaattaataatttgaaaaaatcacataatttagtg 7930343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 9025495 - 9025448
Alignment:
Q  78 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttca 125  Q
    ||||||||||||| | ||||||||||| |||| |||||||||||||||    
T  9025495 cgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9658856 - 9658919
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||||||||||||||| || ||||  || ||||||| | |||||||||||||| ||||||    
T  9658856 cacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgta 9658919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 70
Target Start/End: Original strand, 31384923 - 31384966
Alignment:
Q  27 acaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||| |||||||||||||||||||||||| |||||| |||||    
T  31384923 acaactaataatttgaaaaaatcacataattcagtgtaattaca 31384966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 31579307 - 31579244
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    ||||||| |||||||| |||||||||||   | ||||||||| |||||||||||||| ||||||    
T  31579307 cacgacatggacactgccacaccaacaccgttaataatttgagaaaatcacataattcagtgta 31579244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 32978897 - 32978842
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttca 125  Q
    ||||||||| ||||||||||| | ||||| ||||| | ||||||||||||||||||    
T  32978897 acacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 7151422 - 7151452
Alignment:
Q  34 ataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||||||||||||||||||||||||||    
T  7151422 ataatttgaaaaaatcacataattaagtgta 7151452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 7248430 - 7248488
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||| ||| |||||||||||| | ||||| | ||| |||||||||||||||||||||||    
T  7248430 acacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcatag 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 7625185 - 7625235
Alignment:
Q  78 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||| |||||||| |||| | |||||||| ||||||||||||    
T  7625185 cgtgtccgacaccggaacacgcttaatccaaggagtgttcgtgcttcatag 7625235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 8389457 - 8389411
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttca 125  Q
    |||||||||||| | |||| |||||| ||||||||||||||||||||    
T  8389457 gtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 16833369 - 16833427
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||| |||||||||||| |||| || ||| ||||||||||| || ||||||||    
T  16833369 acacgacacgcgtccgacaccaggacacaccgaatccgaggagtgtctgtacttcatag 16833427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 28152079 - 28152144
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||| || ||| | || |||||||| ||||||||||||||| |||||| |||||    
T  28152079 gacacggacactgacacgccgacaaagctaataatttg-aaaaatcacataattcagtgtaattaca 28152144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 34073335 - 34073278
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||| ||| |||||||| | ||||  |||||||||||||||||||||||||||||    
T  34073335 acacgacatgtg-ccgacaccgggacacctctaattcgaggagtgtccgtgcttcatag 34073278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 5569825 - 5569866
Alignment:
Q  85 gacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    |||||| |||||||||||||  ||||||||||||||||||||    
T  5569825 gacacctgaacacgcctaatctgaggagtgtccgtgcttcat 5569866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 131
Target Start/End: Complemental strand, 5732508 - 5732471
Alignment:
Q  94 acacgcctaattcgaggagtgtccgtgcttcatagctc 131  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  5732508 acacgcctaatccgaggagtgtccatgcttcatagctc 5732471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 9107348 - 9107299
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||| | |||| |||||| ||||||||| |||||||||||||    
T  9107348 gtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcatag 9107299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 19044442 - 19044503
Alignment:
Q  2 acgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgt 63  Q
    |||||| |||||||||||| || |||| ||| ||||||||| || ||||||||||| |||||    
T  19044442 acgacatggacactgacacgccgacacgactaataatttgagaatatcacataattcagtgt 19044503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 99
Target Start/End: Complemental strand, 25038058 - 25038029
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgc 99  Q
    ||||||||||||||||||||||||||||||    
T  25038058 acacgacacgtgtccgacaccagaacacgc 25038029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 30866223 - 30866170
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    ||||| ||||| |||||||||||||  || ||||||||| ||||||||||||||    
T  30866223 gacactgacaccgacacaccaacaccgctaataatttgagaaaatcacataatt 30866170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 4118382 - 4118346
Alignment:
Q  34 ataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||||||||| |||| |||||    
T  4118382 ataatttgaaaaaatcacataattaaatgtaattaca 4118346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 5000613 - 5000557
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    ||||||||| | ||||||||||| ||||| ||||| ||| |||||| ||||||||||    
T  5000613 acacgacacatatccgacaccaggacacgtctaatccgaagagtgttcgtgcttcat 5000557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 5970157 - 5970121
Alignment:
Q  34 ataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||||||| |||||| |||||    
T  5970157 ataatttgaaaaaatcacataattcagtgtaattaca 5970121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9027155 - 9027211
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    |||||||||||||||||||| || ||||  || ||||||||| | ||||||||||||    
T  9027155 cacgacacggacactgacacgccgacaccgctaataatttgagataatcacataatt 9027211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 19147479 - 19147431
Alignment:
Q  7 acggacactgacacaccaacacaactcataatttgaaaaaatcacataa 55  Q
    ||||||||||||||||  ||||| || ||||||||| ||||||||||||    
T  19147479 acggacactgacacacggacacagctaataatttgagaaaatcacataa 19147431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 23293068 - 23292926
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca---------------cacgacacgtgtccg 85  Q
    ||||||||||||| |||||| || ||||| || |||||||||||||||||||||||| ||| || |||||               |||||||||||||||    
T  23293068 cacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggacacgacacgtgtccg 23292969  T
Q  86 acaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||| | ||||||||||| |||||||||||||||||||||||    
T  23292968 acaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 128
Target Start/End: Complemental strand, 3064961 - 3064868
Alignment:
Q  35 taatttgaaaaaatcacataattaagtgtagttacacacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||| ||||||||| |||| |||||| ||| ||||||||| |||||||| |    ||||||||||| |||||||||||||||||||||||    
T  3064961 taatttgagaaaatcacacaattcagtgtaattatacacgacacatgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcatag 3064868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 3947759 - 3947702
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||    
T  3947759 acacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 22440682 - 22440559
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttacacacgacacgtgtccgacaccagaacacgcc 100  Q
    ||||||| ||||||||| ||| | ||||   | ||||||||| |||||||||||||| |||||| ||| |   |||  ||||||||||| || |||||||    
T  22440682 cacgacatggacactgatacatcgacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtgac--gtgtccgacactaggacacgcc 22440585  T
Q  101 taattcgaggagtgtccgtgcttcat 126  Q
    |||| |||||||||||||||||||||    
T  22440584 taatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 36635301 - 36635364
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||| ||||||||||||| ||||||| ||| ||||||||| |||||||||||||| ||||||    
T  36635301 cacgactcggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgta 36635364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 715603 - 715545
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| ||||||||||  | ||||||||||| |||||||||||||||||||||||    
T  715603 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 752929 - 752871
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| ||||||||||  | ||||||||||| |||||||||||||||||||||||    
T  752929 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 24613688 - 24613630
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||| |||||||| ||||| ||||| | |||||||||||||||||||||    
T  24613688 acacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgcttcatag 24613630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 35161097 - 35161155
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||||||| |||||| |||||| |||  ||||||||||||||||||    
T  35161097 acacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcatag 35161155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 42640589 - 42640643
Alignment:
Q  74 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||| |||||| ||||||||||| |||||||| ||||||||||||||    
T  42640589 gacacgtgtccggcaccaggacacgcctaatccgaggagtttccgtgcttcatag 42640643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 18513224 - 18513175
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  18513224 gtgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcatag 18513175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 19482645 - 19482714
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||| ||||||||||| || |||||||| |||||||||||| |||||||||||  ||||| |||||    
T  19482645 cacgacacagacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattaca 19482714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 30982865 - 30982808
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    ||||||||||||||||||||| | ||||||||||| | | ||||||||||||||||||    
T  30982865 acacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 28084589 - 28084640
Alignment:
Q  74 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttca 125  Q
    ||||||||||||||||  | ||||||||||| ||||||||||||||||||||    
T  28084589 gacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 35158063 - 35158004
Alignment:
Q  5 acacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||||||||||| || || ||||| |||||||| ||||||||||||||| ||||||    
T  35158063 acacggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgta 35158004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 2626009 - 2625959
Alignment:
Q  78 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||| ||| ||||||||||||| |||||| ||||||||||||||    
T  2626009 cgtgtccgacatcaggacacgcctaattcaaggagtatccgtgcttcatag 2625959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 14465154 - 14465088
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||| ||||||||||| | |||||| || |||||||||||||||||||||||| | |||| |||||    
T  14465154 gacacagacactgacactctaacacacctaataatttgaaaaaatcacataattcaatgtaattaca 14465088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 19482740 - 19482798
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||||||  | |||| |||||| |||||||||| ||||||||||||    
T  19482740 acacgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 19482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 22234877 - 22234819
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||||||||| ||||  ||||| |||| ||||| ||||||||||||    
T  22234877 acacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcatag 22234819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 29205529 - 29205587
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| ||||||||||  | ||||||||||| |||||||||| ||||||||||||    
T  29205529 acacgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatag 29205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 123
Target Start/End: Original strand, 30838285 - 30838335
Alignment:
Q  73 cgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgctt 123  Q
    |||||||||||||||||||  ||||||||||  ||||||||||||||||||    
T  30838285 cgacacgtgtccgacaccaagacacgcctaacccgaggagtgtccgtgctt 30838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 35157983 - 35157925
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| ||||| ||||| |||||||| |||| |||| ||||||||||||||||||    
T  35157983 acacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcatag 35157925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 36635391 - 36635449
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||| ||| |||||| | ||||||||||| ||| |||||||||||||||||||    
T  36635391 acacgacacgcgtcagacaccgggacacgcctaatccgaagagtgtccgtgcttcatag 36635449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 27706259 - 27706190
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||| ||||||||||||  | |||||| | ||||||| |||||||||||||||| |||||| |||||    
T  27706259 cacgacagggacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaattaca 27706190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 40481614 - 40481682
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||| ||||||||||| || | |||||| |||||||| ||||||||||||||| |||||| |||||    
T  40481614 cacgacactgacactgacacgccgatacaactaataatttg-aaaaatcacataattcagtgtaattaca 40481682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 11596425 - 11596365
Alignment:
Q  10 gacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||| || |||||| | || |||||||||||||||||||||||| |||||| |||||    
T  11596425 gacactgatacgccaacaaagctaataatttgaaaaaatcacataattcagtgtaattaca 11596365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 12797418 - 12797351
Alignment:
Q  2 acgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||||| ||  || |||| ||||||||| |||||||||||||| |||||| |||||    
T  12797418 acgacacggacactgacacgccggcaaaactaataatttga-aaaatcacataattcagtgtaattaca 12797351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2362057 - 2361994
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||  |||| ||||||||| ||||| || ||||||||||||||| |||||||| ||||||    
T  2362057 cacgacattgacattgacacaccgacacagctaataatttgaaaaaattacataatttagtgta 2361994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 12895272 - 12895213
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    |||||||| || ||||||| | | ||||||||||| |||||||||| |||||||||||||    
T  12895272 acacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatagc 12895213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 12895355 - 12895300
Alignment:
Q  2 acgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    |||||||| ||| |||||| || |||||| | ||||||||||||||||||||||||    
T  12895355 acgacacgaacaatgacacgccgacacaaataataatttgaaaaaatcacataatt 12895300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 20743261 - 20743210
Alignment:
Q  73 cgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttc 124  Q
    |||||||||||||||||| ||||||  ||||| ||| |||||||||||||||    
T  20743261 cgacacgtgtccgacaccggaacacatctaatccgatgagtgtccgtgcttc 20743210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 24343577 - 24343632
Alignment:
Q  73 cgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||| ||||||||||||| | ||||||||| |  ||||||||||||||||||||||    
T  24343577 cgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcatag 24343632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 29205439 - 29205490
Alignment:
Q  19 acaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||  || |||||||||||||||||||||||| |||||| |||||    
T  29205439 acaccaacacggctaataatttgaaaaaatcacataattcagtgtaattaca 29205490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 30298926 - 30298993
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttg-aaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||| || ||||| || |||||||| ||||||| |||||||| |||||| |||||    
T  30298926 gacacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattaca 30298993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 30327794 - 30327861
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttg-aaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||| || ||||| || |||||||| ||||||| |||||||| |||||| |||||    
T  30327794 gacacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattaca 30327861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 54580081 - 54580042
Alignment:
Q  25 acacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  54580081 acacaactaataatttgaaaaaatcacataattcagtgta 54580042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 941314 - 941368
Alignment:
Q  78 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctca 132  Q
    ||||||||||| ||| |||| |||||| ||| || ||||||||||||||||||||    
T  941314 cgtgtccgacatcaggacacacctaatccgaagactgtccgtgcttcatagctca 941368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 5775338 - 5775304
Alignment:
Q  94 acacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||| |||||||||||||||||||||||    
T  5775338 acacgcctaatccgaggagtgtccgtgcttcatag 5775304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 12708225 - 12708263
Alignment:
Q  92 gaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  12708225 gaacacgcctaatccgaggagcgtccgtgcttcatagct 12708263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 12895100 - 12895054
Alignment:
Q  83 ccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    |||||||| | | ||||||||||||| ||||||||||||||||||||    
T  12895100 ccgacaccgggatacgcctaattcgaagagtgtccgtgcttcatagc 12895054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 15724541 - 15724483
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||| ||||||||| ||||||| |||||||||||| |||||||| |  |||||||||||    
T  15724541 acacaacacgtgtcagacaccaaaacacgcctaatccgaggagtttatgtgcttcatag 15724483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 16073455 - 16073513
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||| || |||||||||| |  ||||||||||| |||||||||||| ||||||||||    
T  16073455 acacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcatag 16073513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 21945483 - 21945549
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||| ||||||||||  || ||||| || ||||||||||||||| |||||||| |||||| |||||    
T  21945483 gacacagacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattaca 21945549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 28964246 - 28964188
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| | ||||||||  | ||||||||||| |||||||||||| ||||||||||    
T  28964246 acacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcatag 28964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 32273594 - 32273552
Alignment:
Q  15 tgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||    
T  32273594 tgacacgccaacacaactaataatttgaaaaaataacataatt 32273552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 34306802 - 34306744
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||||||||||   |||||||||||  ||||| ||| ||||||||||||    
T  34306802 acacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcatag 34306744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 49431087 - 49431145
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||| ||||| | |||||||| || |||||||||||| ||||| ||||    
T  49431087 acacgacacgtgtccaacaccgggacacgccttatccgaggagtgtccatgctttatag 49431145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 128
Target Start/End: Complemental strand, 53381576 - 53381530
Alignment:
Q  82 tccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| | |||| |||||| |||||||||||||||||||||||    
T  53381576 tccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 53381530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 4157210 - 4157266
Alignment:
Q  70 acacgacacgtgtccgacacc-agaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    ||||||||| ||||||||||| |||| || |||||||||||||||||| |||||||||    
T  4157210 acacgacacatgtccgacaccgagaa-acacctaattcgaggagtgtctgtgcttcat 4157266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 4157497 - 4157553
Alignment:
Q  70 acacgacacgtgtccgacacc-agaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    ||||||||| ||||||||||| |||| |||||||||||||||||||||  ||||||||    
T  4157497 acacgacacatgtccgacaccgagaa-acgcctaattcgaggagtgtctatgcttcat 4157553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 127
Target Start/End: Original strand, 4383451 - 4383484
Alignment:
Q  94 acacgcctaattcgaggagtgtccgtgcttcata 127  Q
    ||||||||||| ||||||||||||||||||||||    
T  4383451 acacgcctaatccgaggagtgtccgtgcttcata 4383484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11651216 - 11651155
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtg 62  Q
    ||||| ||||||||||||||  | ||||| || ||||||| |||||||||||||||| ||||    
T  11651216 cacgatacggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 11651155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 14465063 - 14465006
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    ||||||||||||| ||||||  | ||||| |||||  |||||||||||||||||||||    
T  14465063 acacgacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcata 14465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 50280867 - 50280920
Alignment:
Q  10 gacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgt 63  Q
    ||||| ||||| || ||||| || ||||||||||||| ||||||||||||||||    
T  50280867 gacacggacacgccgacacagctaataatttgaaaaattcacataattaagtgt 50280920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 1148430 - 1148370
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    |||||||||||||  ||||||||||||||  |||| |||| |||||| | |||||||||||    
T  1148430 acacgacacgtgtttgacaccagaacacgtataatccgagaagtgtctgagcttcatagct 1148370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 6485660 - 6485624
Alignment:
Q  34 ataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||||||| |||||| |||||    
T  6485660 ataatttgaaaaaatcacataatttagtgtaattaca 6485624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 11596345 - 11596297
Alignment:
Q  80 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| | | |||||||||||  ||||||||||||||||||||||    
T  11596345 tgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11596297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 11931362 - 11931410
Alignment:
Q  80 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||| |||| |||||| |  ||||||||||||||||||||    
T  11931362 tgtccgacaccaggacacacctaatccatggagtgtccgtgcttcatag 11931410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 17425396 - 17425348
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    ||||| ||||| || ||||||||||| ||||||||||| ||||||||||    
T  17425396 gtgtcagacacaaggacacgcctaatccgaggagtgtctgtgcttcata 17425348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 17876237 - 17876285
Alignment:
Q  80 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||| |||| |||||| | ||||||||| |||||||||||    
T  17876237 tgtccgacaccaggacacacctaatccaaggagtgtctgtgcttcatag 17876285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 28964297 - 28964261
Alignment:
Q  34 ataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||||||| |||||| |||||    
T  28964297 ataatttgaaaaaatcacataattcagtgtaattaca 28964261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 40965341 - 40965389
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    |||||||||||||  |||||||||||  |||||||||| ||||||||||    
T  40965341 gtgtccgacaccaagacacgcctaatctgaggagtgtcggtgcttcata 40965389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 47264060 - 47264116
Alignment:
Q  72 acgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||| |||| |||||||| ||||||||||| ||| ||| ||| |||||||||||    
T  47264060 acgacacatgtctgacaccaggacacgcctaatccgaagagcgtctgtgcttcatag 47264116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 49431002 - 49431066
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttg-aaaaaatcacataattaagtgta 64  Q
    |||||| |||||| |||||| || ||||| || |||||||| |||||||||||||||| ||||||    
T  49431002 cacgactcggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgta 49431066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 18841095 - 18840953
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttac---------------acacgacacgtgtccg 85  Q
    ||||||| |||||||||||| |  |||||||| ||||||||||||||| ||||||||||||||| ||||               ||||||||| ||||||    
T  18841095 cacgacatggacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtcagacacgacacatgtccg 18840996  T
Q  86 acaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||| | |||| |||||| |||||||||||||||||||||||    
T  18840995 acaccgggacacacctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 26769583 - 26769641
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||||||  | ||||||||||| |||||||||||||||||||||||    
T  26769583 acacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 2438717 - 2438661
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    ||||||||| ||||||||||| | ||||||||||| |||||||||||||||||||||    
T  2438717 acacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 35056940 - 35057000
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    ||||||||||||||||||||   ||||||||||||  ||||||||||||||||||||||||    
T  35056940 acacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcatagct 35057000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 30717610 - 30717543
Alignment:
Q  3 cgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||| ||| ||| | || |||||||||||||||||||||||| |||||| |||||    
T  30717610 cgacacggacactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaattaca 30717543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 19536480 - 19536410
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaa-aaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||| |||||| || |||||||| |||||||||| |||||||||||||| |||||| |||||    
T  19536480 cacgacacggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattaca 19536410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 37419823 - 37419873
Alignment:
Q  78 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  37419823 cgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 37559042 - 37559096
Alignment:
Q  74 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||| | |||||| |||| |||||||||||||||||||||||    
T  37559042 gacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcatag 37559096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 38117157 - 38117099
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||| |||||||||||||||| | ||||||||||| ||||| |||||||||||||||||    
T  38117157 acacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12941017 - 12940948
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||||||    |||||||| ||||||||||||||||| |||||| |||||| |||||    
T  12941017 cacgacacggacactgacacgttgacacaactaataatttgaaaaaatcatataattcagtgtaattaca 12940948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15657841 - 15657910
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||| |||| || || ||||| |||||||| ||||||||||||||| |||||| |||||    
T  15657841 cacgacacggacactaacacgccgactcaactaataatttgtaaaaatcacataattcagtgtaattaca 15657910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 20539756 - 20539687
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||||||  | ||||| || ||||||||||||||||| |||||| |||||| |||||    
T  20539756 cacgacacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattaca 20539687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 28596530 - 28596587
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    ||||||||||||||||||||  | |||| |||||| ||||||||||||||||||||||    
T  28596530 acacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 30335394 - 30335463
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||  ||| || |||||||| ||||||||||||||| |||||||| |||||| |||||    
T  30335394 cacgacacggacactagcacgccgacacaactaataatttgaaaaaatgacataatttagtgtaattaca 30335463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 44860392 - 44860449
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    |||||||| |||||||||| | | |||| |||||||||||||||||||||||||||||    
T  44860392 acacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 6940233 - 6940301
Alignment:
Q  2 acgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||||| || ||||| || ||||||| ||||| | ||||||||||||||| |||||    
T  6940233 acgacacggacactgacacgccgacacagctaataattttaaaaagttacataattaagtgtaattaca 6940301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 15972851 - 15972919
Alignment:
Q  2 acgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||||| || |||||| | ||||||||||||||| ||| |||| |||||| |||||    
T  15972851 acgacacggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattaca 15972919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 18421941 - 18422009
Alignment:
Q  2 acgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||||| || |||||| | ||||||| |||| ||||||||||| |||||| |||||    
T  18421941 acgacacggacactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattaca 18422009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 42511380 - 42511320
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    |||| |||||||||||||||  | ||||| ||||| |||||||||||||||||||||||||    
T  42511380 acacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatagct 42511320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34785064 - 34785001
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    ||||||||||||||||||||||| |||||||| ||  ||| | |||||||||||||| ||||||    
T  34785064 cacgacacggacactgacacaccgacacaactaatttttttagaaaatcacataatttagtgta 34785001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 21374778 - 21374712
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||| |||| || ||||| || ||||||||||||||| |||||||| |||||| |||||    
T  21374778 gacacggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattaca 21374712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 30404929 - 30404863
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||| || ||||   | |||||||||||||||||||||||| |||||| |||||    
T  30404929 gacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattaca 30404863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 34006980 - 34006930
Alignment:
Q  78 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||| |||||| |||||| |||||||| |||||||||||||||||||||    
T  34006980 cgtgtctgacaccggaacacacctaattcaaggagtgtccgtgcttcatag 34006930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 34993980 - 34993922
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||| |||||||||||  | ||||||||||||| |||||||| ||||||||||||    
T  34993980 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcatag 34993922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 37558957 - 37559023
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||| || ||||| || |||||||| ||||||||||||||| | |||| |||||    
T  37558957 gacacggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattaca 37559023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 10535734 - 10535685
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||| |||||||| ||||||||||| |||||||||| ||||||||||||    
T  10535734 gtgtctgacaccaggacacgcctaatccgaggagtgttcgtgcttcatag 10535685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 24894370 - 24894427
Alignment:
Q  5 acacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtg 62  Q
    |||||||||||||||| || ||||| || ||||||| |||||||||||||||| ||||    
T  24894370 acacggacactgacacgccgacacagctaataatttaaaaaaatcacataattcagtg 24894427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 23718006 - 23718066
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||||||||||||||| ||||  || ||||||||| ||| |||||||||| ||||||    
T  23718006 gacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgta 23718066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 24105678 - 24105738
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||||||||||||||| ||||  || ||||||||| ||| |||||||||| ||||||    
T  24105678 gacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgta 24105738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 30717517 - 30717457
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    ||||||||||||| ||||||  | | ||||||||| | |||||||||||||||||||||||    
T  30717517 acacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcatagct 30717457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 35449568 - 35449627
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacg--cctaattcgaggagtgtccgtgcttcata 127  Q
    ||||||||| |||||||||||||||||||   ||||| ||||||||||| ||||||||||    
T  35449568 acacgacacatgtccgacaccagaacacgtctctaatccgaggagtgtctgtgcttcata 35449627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 21616739 - 21616802
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||||||||| ||||| || ||||  || ||||||||| |||||||||||||| ||||||    
T  21616739 cacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgta 21616802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 34337257 - 34337202
Alignment:
Q  2 acgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    |||||||||||| |||||| || |||||  | ||||||||||||||||||||||||    
T  34337257 acgacacggacattgacacgccgacacagttgataatttgaaaaaatcacataatt 34337202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 11223850 - 11223793
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| |||| |||||| | |||||||||||  ||||||||||||||||||||||    
T  11223850 acacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 11223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 15972934 - 15972992
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||||||| || | |||| |||||| ||| || ||||||||||||||||    
T  15972934 acacgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcatag 15972992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23058525 - 23058455
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaa-aaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||| |||||| || |||||| | |||||||||| |||||||||||||  |||||| |||||    
T  23058525 cacgacacggacagtgacacgcccacacaattaataatttgaaaaaaatcacataatccagtgtaattaca 23058455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 24009356 - 24009414
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||| |||||  | |||||||| || | |||||||||||||||||||||    
T  24009356 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 24009414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 28412422 - 28412476
Alignment:
Q  74 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||  | ||||| ||||||||||||| ||| |||||||||||    
T  28412422 gacacgtgtccgacactgggacacggctaattcgaggagcgtcagtgcttcatag 28412476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 34784969 - 34784911
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| |||| |||||  | |||||||| |||||||||||||| |||||||||||    
T  34784969 acacgacacctgtctgacacggggacacgccttattcgaggagtgtctgtgcttcatag 34784911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 36756425 - 36756363
Alignment:
Q  2 acgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    ||||||| |||||||||||  | |||||||| |||||||||| |||| |||||||| ||||||    
T  36756425 acgacacagacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgta 36756363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 2331773 - 2331834
Alignment:
Q  3 cgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    ||||||||||| |||||| | ||||| | | ||||||||| |||||||||||||| ||||||    
T  2331773 cgacacggacattgacacgcaaacaccattaataatttgagaaaatcacataattcagtgta 2331834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 14996212 - 14996171
Alignment:
Q  75 acacgtgtccgacaccagaacacgcctaattcgaggagtgtc 116  Q
    ||||||||| |||||| ||||||||||||| |||||||||||    
T  14996212 acacgtgtctgacaccggaacacgcctaatccgaggagtgtc 14996171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 15657939 - 15657992
Alignment:
Q  73 cgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    ||||||||||||||| || | ||||||||| | |||||||||||| ||||||||    
T  15657939 cgacacgtgtccgacgccgggacacgcctagtccgaggagtgtccatgcttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 15909619 - 15909570
Alignment:
Q  79 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||  | ||||||||||||||| |||||| ||||||||||||    
T  15909619 gtgtccgacacagggacacgcctaattcgaagagtgttcgtgcttcatag 15909570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 21782801 - 21782744
Alignment:
Q  71 cacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||| ||||| | ||||| |||||  | ||||||||||||||||||||    
T  21782801 cacgacacgtgtccaacaccgggacacgtctaatctgtggagtgtccgtgcttcatag 21782744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 12601196 - 12601140
Alignment:
Q  73 cgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    |||| ||||||| ||||||  |||| |||||||||||||||||| || |||||||||    
T  12601196 cgacgcgtgtccaacaccaagacacacctaattcgaggagtgtctgtacttcatagc 12601140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 19580283 - 19580223
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    |||| |||||||||| |||||| |||||  ||||| ||| ||||||| |||||||||||||    
T  19580283 acacaacacgtgtccaacaccaaaacacatctaatccgaagagtgtctgtgcttcatagct 19580223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 19942326 - 19942382
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    ||||| || ||||| |||||| | ||||||||||| |||||||||||| ||||||||    
T  19942326 acacggcatgtgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 27084330 - 27084390
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    ||||||||||||||| |||||   |||||||||||  ||||||||||  ||||||||||||    
T  27084330 acacgacacgtgtccaacaccgagacacgcctaatcggaggagtgtctctgcttcatagct 27084390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 36756331 - 36756275
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    |||| |||| |||||||||||  |||||||||||| | ||||||||| |||||||||    
T  36756331 acacaacacatgtccgacaccgcaacacgcctaatcctaggagtgtctgtgcttcat 36756275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 38117232 - 38117188
Alignment:
Q  10 gacactgacacaccaacacaactcataatttgaaaaaatcacata 54  Q
    ||||||||||| || ||||| || |||||||||||||||||||||    
T  38117232 gacactgacacgccgacacagctaataatttgaaaaaatcacata 38117188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 3000 - 3059
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  3000 acacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgctccatagc 3059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 6326379 - 6326253
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttacacacgacacgtgtccgacaccagaacacgcc 100  Q
    |||||||||||||||||||| || |||   ||  |||||||| ||||| |||||||| |||||| |||||   | || | ||| |||||| |||||||||    
T  6326379 cacgacacggacactgacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaattacaagtgtca-gcgtcggacaccggaacacgcc 6326281  T
Q  101 taattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| ||||||||||||||||||    
T  6326280 taattcgagaagtgtccgtgcttcatag 6326253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 19552625 - 19552562
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||||||||||||||| || |||||  | |||||||||||||||||||||||||||||||    
T  19552625 cacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaagtgta 19552562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 14674249 - 14674315
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||| || ||||| || |||||||||||||||||||||||| |||||| |||||    
T  14674249 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattaca 14674315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 21191138 - 21190998
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttac---------------acacgacacgtgtccg 85  Q
    |||||||||||||||||||  || ||||| || |||||||||||||||||||||||| |||||| ||||               |||| |||||||||||    
T  21191138 cacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccg 21191039  T
Q  86 acaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    || || | ||||||||||| |||||||||||||||||||||    
T  21191038 actccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 21576824 - 21576684
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca---------------cacgacacgtgtccgaca 88  Q
    |||||| ||||||| || |||||||| || |||||||||||||||||||||||| |||||| |||||               ||||||||||||| ||||    
T  21576824 gacacgaacactgatacgccaacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcggacacgacacgtgtctgaca 21576725  T
Q  89 ccagaacacgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    |  | ||||||||||| ||||||||||||||||||||||||    
T  21576724 ctgggacacgcctaatccgaggagtgtccgtgcttcatagc 21576684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 27932296 - 27932354
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||  |||||||||||    
T  27932296 acacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcatag 27932354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 30098398 - 30098456
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||| |||||||| |||| |||||| |||||| ||||||||||||||||    
T  30098398 acacgacacgtgtcagacaccaggacacacctaatccgaggaatgtccgtgcttcatag 30098456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 42893421 - 42893479
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||| |||||||||||||||||| |||||||||||  ||||||||||| ||||||||||    
T  42893421 acacaacacgtgtccgacaccaggacacgcctaatatgaggagtgtccatgcttcatag 42893479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 2436980 - 2437033
Alignment:
Q  78 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctc 131  Q
    ||||||||||||||  ||||||||||| |||||||||| |||||||||||||||    
T  2436980 cgtgtccgacaccaagacacgcctaatccgaggagtgttcgtgcttcatagctc 2437033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6247599 - 6247668
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||| ||| |||||||||| || ||||| || |||||||||||||||||||||||| |||||| |||||    
T  6247599 cacgatacgcacactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattaca 6247668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 14873588 - 14873641
Alignment:
Q  75 acacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||| ||||| | ||||||||||| |||||||||||||||||||||||    
T  14873588 acacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 14873641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 21351979 - 21351918
Alignment:
Q  9 ggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||| |||||||| |||||| |||||| |||||||||| |||||| |||||    
T  21351979 ggacactgacacaccgacacaactaataattggaaaaagtcacataattcagtgtaattaca 21351918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21522727 - 21522796
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||| || ||||| || ||||||| ||||||| |||||||| |||||| |||||    
T  21522727 cacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattaca 21522796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21533293 - 21533362
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||||||||| || ||||| || ||||||| ||||||| |||||||| |||||| |||||    
T  21533293 cacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattaca 21533362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24906383 - 24906314
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||| |||||||||| ||||||||  | ||||||||||||||| |||||||| |||||| |||||    
T  24906383 cacgacacgaacactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattaca 24906314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 6770523 - 6770583
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||||||||||||||  |||||||| ||||||| | |||||||||||||| ||||||    
T  6770523 gacacggacactgacacactgacacaactaataatttaagaaaatcacataattcagtgta 6770583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 72 - 128
Target Start/End: Complemental strand, 32766928 - 32766872
Alignment:
Q  72 acgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||||||| | ||| |||||  ||||||||||||||||||||||    
T  32766928 acgacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcatag 32766872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 43001866 - 43001922
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    ||||||||||||||  ||||| | ||||||||||| |||||||||||||||||||||    
T  43001866 acacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 22013391 - 22013454
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||||||||||||||| || ||||| || |||||||| |||||| |||||||| ||||||    
T  22013391 cacgacacggacactgacacgccgacacagctaataatttggaaaaattacataatttagtgta 22013454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 39268596 - 39268541
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttca 125  Q
    |||||||| |||||||||||  | ||||||||||| ||||||||||||||||||||    
T  39268596 acacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 39698524 - 39698587
Alignment:
Q  7 acggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||||||||| |  ||||| || |||||||||||||||||||||||| |||||| |||||    
T  39698524 acggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattaca 39698587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 41995449 - 41995504
Alignment:
Q  2 acgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    ||||||| ||||||||||| || |||||||| |||||| |||||||||||||||||    
T  41995449 acgacacagacactgacacgccgacacaactaataattcgaaaaaatcacataatt 41995504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 24906286 - 24906252
Alignment:
Q  94 acacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||||||||||||||||||||||||||    
T  24906286 acacgcctaattcgaggagtgtccgtgcttcatag 24906252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 124
Target Start/End: Original strand, 30183621 - 30183675
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttc 124  Q
    ||||||||||||||||||||  | |||||||||||||||| |||||| |||||||    
T  30183621 acacgacacgtgtccgacactgggacacgcctaattcgagaagtgtctgtgcttc 30183675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 31084389 - 31084447
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||||||  | ||| ||||||| ||||||||||||||| |||||||    
T  31084389 acacgacacgtgtccgacactgggacatgcctaatccgaggagtgtccgtggttcatag 31084447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 39698613 - 39698671
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||| || |||||||||   ||||||||||| |||||||||||||||||||||||    
T  39698613 acacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 43564942 - 43565000
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||| ||||||||| || | ||||||||||| |||| ||||||||||||||||||    
T  43564942 acacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcatag 43565000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 33178014 - 33178071
Alignment:
Q  13 actgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||| || |||||||| ||||||| |||||||||||||||| |||||| |||||    
T  33178014 actgacacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattaca 33178071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 37328926 - 37328857
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||| ||||| ||||| |  |||||||| |||||||||| |||| |||||| |||||    
T  37328926 cacgacacggacactgatacaccgacacagcaaataatttgtaaaaatcacaaaattcagtgtaattaca 37328857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 42893345 - 42893406
Alignment:
Q  9 ggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||| |||||||| ||||| || |||||||||||||||||||||||  |||||| |||||    
T  42893345 ggacacggacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattaca 42893406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 17088358 - 17088402
Alignment:
Q  76 cacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtg 120  Q
    ||||||||||||||| | ||||||||||| |||||||||||||||    
T  17088358 cacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 19820376 - 19820328
Alignment:
Q  80 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||| | |||||||||||  ||||||||||||||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcatag 19820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 21522822 - 21522882
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    |||||||||||||||| |||| | ||||||||||| | | |||||||||||| ||||||||    
T  21522822 acacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatagct 21522882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 21533388 - 21533448
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    |||||||||||||||| |||| | ||||||||||| | | |||||||||||| ||||||||    
T  21533388 acacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatagct 21533448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 31084309 - 31084369
Alignment:
Q  10 gacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||| || ||||| || |||||||||||||||||||||||| | |||| |||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattaca 31084369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 35017110 - 35017162
Alignment:
Q  76 cacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| ||| | | ||||||||||| |||||||||||||||||||||||    
T  35017110 cacgtgtccaacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 35017162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 7677777 - 7677836
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    ||||| ||| ||||||||||| | ||||||||||| ||||||| ||| ||||||||||||    
T  7677777 acacgtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcatagc 7677836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13287481 - 13287418
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    ||||||||||||||| ||||  | |||||  | |||||||||||||||||||||||| ||||||    
T  13287481 cacgacacggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgta 13287418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 21194121 - 21194062
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 129  Q
    ||||||||| |||| |||||| |  |||||||||| |||||||||||||||||| |||||    
T  21194121 acacgacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctttatagc 21194062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 137
Target Start/End: Complemental strand, 41558638 - 41558579
Alignment:
Q  78 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctcagaagt 137  Q
    |||| |||||||||| | |||||||||| || ||||||| ||||||||||| ||||||||    
T  41558638 cgtgaccgacaccaggatacgcctaatttgaagagtgtcagtgcttcatagatcagaagt 41558579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 10298635 - 10298669
Alignment:
Q  94 acacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||| |||||||||||||||||||||||    
T  10298635 acacgcctaatccgaggagtgtccgtgcttcatag 10298669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 15382546 - 15382592
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtc 116  Q
    ||||||||| ||||||||||| | ||||||||||| |||||||||||    
T  15382546 acacgacacatgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 16304424 - 16304366
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||||||||| ||||||||   ||||| ||||| |||||| ||||||||||||||||    
T  16304424 acacgacacgtgcccgacaccgagacacgtctaatccgaggaatgtccgtgcttcatag 16304366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 17123132 - 17123166
Alignment:
Q  94 acacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||| |||||||||||||||||||||||    
T  17123132 acacgcctaatccgaggagtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 17593715 - 17593661
Alignment:
Q  76 cacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    ||||||||| ||||| | |||||| |||| |||||||||||||| ||||||||||    
T  17593715 cacgtgtccaacaccgggacacgcttaatccgaggagtgtccgtacttcatagct 17593661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 22423798 - 22423764
Alignment:
Q  94 acacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||| |||||||||||||||||||||||    
T  22423798 acacgcctaatccgaggagtgtccgtgcttcatag 22423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 36642749 - 36642696
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttc 124  Q
    ||||||||||||||||||||  || ||||||||||| |||||||||| |||||||    
T  36642749 acacgacacgtgtccgacacggga-cacgcctaattggaggagtgtcggtgcttc 36642696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 4105237 - 4105305
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaa--atcacataattaagtgtagttaca 70  Q
    |||||||| |||||||| || ||| |||| |||||||||||||  ||||||||||| |||||| |||||    
T  4105237 gacacggatactgacacgccgacataactaataatttgaaaaaagatcacataattcagtgtaattaca 4105305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 18586265 - 18586232
Alignment:
Q  92 gaacacgcctaattcgaggagtgtccgtgcttca 125  Q
    |||||| |||||||||||||||||||||||||||    
T  18586265 gaacacacctaattcgaggagtgtccgtgcttca 18586232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 19579682 - 19579739
Alignment:
Q  5 acacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtg 62  Q
    ||||||||||||| || || ||||| || ||||||||| |||||||||||||| ||||    
T  19579682 acacggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtg 19579739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 21542102 - 21542159
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    ||||||||||||||||||||| | ||||||| ||| | |||| ||||||||| |||||    
T  21542102 acacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcatcata 21542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 43564863 - 43564921
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||| |||||||||| || |||||  |||||||||| ||||||||||||||| ||||||    
T  43564863 gacacgaacactgacacgccgacaca--tcataatttggaaaaatcacataatttagtgta 43564921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 10298553 - 10298601
Alignment:
Q  8 cggacactgacacaccaacacaactcataatttgaaaaaatcacataat 56  Q
    |||||||| |||| || |||||||| ||||||||||||| |||||||||    
T  10298553 cggacactaacacgccgacacaactaataatttgaaaaagtcacataat 10298601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 14422881 - 14422942
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    ||||||| ||||||||||||||| | ||| || |||||||  ||||||||||||||| ||||||    
T  14422881 cacgacaaggacactgacacaccgatacagctaataattt--aaaaatcacataattcagtgta 14422942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 17123033 - 17123085
Alignment:
Q  9 ggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagt 61  Q
    |||||||||||| |||||||  || ||||||||| ||||||||||||| ||||    
T  17123033 ggacactgacacgccaacaccgctaataatttgagaaaatcacataatcaagt 17123085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 17177104 - 17177056
Alignment:
Q  2 acgacacggacactgacacaccaacacaactcataatttgaaaaaatca 50  Q
    ||||| |||||||||| || |||||||| || |||||||||||||||||    
T  17177104 acgactcggacactgatacgccaacacagctaataatttgaaaaaatca 17177056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 19168900 - 19168840
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||||||||||||||| ||||  ||  |||||||| |||||||||| ||| ||||||    
T  19168900 gacacggacactgacacacctacaccgctattaatttgataaaatcacattattcagtgta 19168840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 22423894 - 22423838
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataatt 57  Q
    ||||||||||| |||||||| |  |||| ||| ||||||||| ||||||||||||||    
T  22423894 cacgacacggatactgacaccctgacactactaataatttgagaaaatcacataatt 22423838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 23015982 - 23015926
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    |||||||| ||||||||||   | ||||||||||| ||||||||||||| |||||||    
T  23015982 acacgacatgtgtccgacattgggacacgcctaatccgaggagtgtccgagcttcat 23015926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 38464361 - 38464313
Alignment:
Q  80 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||| | |||| |||||| ||||||||||| |||||||||||    
T  38464361 tgtccgacaccgggacacacctaatccgaggagtgtctgtgcttcatag 38464313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 8622 - 8564
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||||| |||||||||||||  | |||||||||||||||||||||||||||||||||||    
T  8622 acacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcatag 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 51791 - 51857
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||||||| || ||||| || |||||||||||||||||||||||| |||||| |||||    
T  51791 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattaca 51857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 178901 - 178831
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatca-cataattaagtgtagttaca 70  Q
    |||||||||||||||||||| || |||||||| ||||||||||||||||| ||||||| |||||| |||||    
T  178901 cacgacacggacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattaca 178831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 241666 - 241724
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||||||| | ||||||||||| |||| ||||||||||||||||||    
T  241666 acacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

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Target: scaffold0003; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 241571 - 241634
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||||||||||||||| || ||||| || |||||||| ||||||||||||||| ||||||    
T  241571 cacgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgta 241634  T

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Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 348083 - 348142
Alignment:
Q  7 acggacactgacacaccaacacaactcataatttgaaaa--aatcacataattaagtgta 64  Q
    |||||||||||||||||||| || || | ||||| ||||  |||||||||||||||||||    
T  348083 acggacactgacacaccaacccagctaaaaatttaaaaaaaaatcacataattaagtgta 348142  T

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Target: scaffold0223 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 20149 - 20218
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||| |||||| || ||||| || |||||||||||||||||||||||| |||||| |||||    
T  20149 cacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattaca 20218  T

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Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 225247 - 225199
Alignment:
Q  78 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  225247 cgtgttcgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 225199  T

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Target: scaffold0053 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 8775 - 8924
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttac---------------acacgacacgtgtccg 85  Q
    |||||||||||||||||||| || ||||| || ||||||||||||||||| || ||| |||||| ||||               ||||||||||||||||    
T  8775 cacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccg 8874  T
Q  86 acaccagaacacgcctaattcgaggagtgtccgtgcttcatagctcagaa 135  Q
    |||||   |||||||||||  ||||||| |||||||||||||| ||||||    
T  8875 acaccgagacacgcctaatctgaggagtctccgtgcttcatagatcagaa 8924  T

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Target: scaffold0793 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 4879 - 4821
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| ||||||||||  | ||||||||||| |||||||||||||||||||||||    
T  4879 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 4821  T

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Target: scaffold0652 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 460 - 398
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctca 132  Q
    ||||||| ||||||||||||| | |||| |||||| |||||||||||||||||||||| ||||    
T  460 acacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcataactca 398  T

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Target: scaffold0652; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 544 - 475
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||| |||||||||||| || || ||||  || ||||||||||||||||||| |||| |||||| |||||    
T  544 cacgccacggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattaca 475  T

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Target: scaffold0306 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 13380 - 13438
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtg 62  Q
    ||||||||||||||||| || |||||||| ||||||||| |||||||||||||| ||||    
T  13380 gacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtg 13438  T

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Target: scaffold0306; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 13467 - 13523
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    |||||||||| ||| ||||| || |||| |||||| | |||||||||||||||||||    
T  13467 acacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 13523  T

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Target: scaffold0152 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 21947 - 21889
Alignment:
Q  4 gacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtg 62  Q
    ||||||||||||||||| || |||||||| ||||||||| |||||||||||||| ||||    
T  21947 gacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtg 21889  T

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Target: scaffold0152; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 21860 - 21804
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    |||||||||| ||| ||||| || |||| |||||| | |||||||||||||||||||    
T  21860 acacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 21804  T

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Target: scaffold0027 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 46659 - 46728
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||| |||||| || |||||  | |||||||||||||||||||||||| |||||| |||||    
T  46659 cacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattaca 46728  T

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Target: scaffold0027; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 46742 - 46776
Alignment:
Q  94 acacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||| |||||||||||||||||||||||    
T  46742 acacgcctaatccgaggagtgtccgtgcttcatag 46776  T

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Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 92883 - 92940
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 127  Q
    ||||||||| |||| |||||| | ||||||||||| ||||||||||||||||||||||    
T  92883 acacgacacatgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcata 92940  T

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Target: scaffold0050 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 70339 - 70399
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    ||||||||||||||||||||||| ||| ||||||| ||| |||||| ||||||||| ||||    
T  70339 acacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttcaaagct 70399  T

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Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 14522 - 14646
Alignment:
Q  16 gacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttac------------acacgacacgtgtccgacaccagaacacgcctaa 103  Q
    ||||| || |||||||| |||||||||||||||||||||||| |||||| ||||            |||||||||||||||||||||   ||||||||||    
T  14522 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtggtgtcggacacgacacgtgtccgacaccgagacacgcctaa 14621  T
Q  104 ttcgaggagtgtccgtgcttcatag 128  Q
    |   |||||||| ||||||||||||    
T  14622 tcgaaggagtgtacgtgcttcatag 14646  T

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Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 90820 - 90883
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    |||||||| ||||||||||||||||||| | | ||||||||| ||||||| |||||| ||||||    
T  90820 cacgacacagacactgacacaccaacaccattaataatttgagaaaatcatataattcagtgta 90883  T

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Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 90904 - 90962
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||| ||||||||||||||||| |||||||||||| | | ||||||  |||||||||||    
T  90904 acacaacacgtgtccgacaccaaaacacgcctaatccaatgagtgtatgtgcttcatag 90962  T

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Target: scaffold0380 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 8662 - 8720
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||||||||  | | ||||||||| | |||||||||||||||||||||    
T  8662 acacgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 8720  T

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Target: scaffold0019 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 71797 - 71855
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    |||| |||||||||||||||| | ||||| ||||| ||||||||||| |||||||||||    
T  71797 acacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcatag 71855  T

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Target: scaffold0246 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 19553 - 19621
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||| ||||||||||| || | |||||| |||||||| ||||||||||||||| |||||| |||||    
T  19553 cacgacactgacactgacacgccgatacaactaataatttg-aaaaatcacataattcagtgtaattaca 19621  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 17807 - 17762
Alignment:
Q  25 acacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||    
T  17807 acacaactaataatttgaaaaaatcacataatttagtgtaattaca 17762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 263359 - 263303
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 126  Q
    ||||||||||||| ||| ||||  ||||||||||| ||||||||||||||| |||||    
T  263359 acacgacacgtgttcgataccaagacacgcctaatccgaggagtgtccgtggttcat 263303  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 121
Target Start/End: Original strand, 188473 - 188512
Alignment:
Q  82 tccgacaccagaacacgcctaattcgaggagtgtccgtgc 121  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  188473 tccgacaccaggacacgcctaatccgaggagtgtccgtgc 188512  T

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Target: scaffold1528 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 1013 - 1075
Alignment:
Q  2 acgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    ||||||| ||| |||||||||| ||||  || ||||||||||||||| |||||||| ||||||    
T  1013 acgacacagacgctgacacaccgacaccgctaataatttgaaaaaattacataattcagtgta 1075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 3393 - 3427
Alignment:
Q  94 acacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||| |||||||||||||||||||||||    
T  3393 acacgcctaatccgaggagtgtccgtgcttcatag 3427  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 3836 - 3778
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| ||||||||| |   ||||||||||| |||||||||||| ||||||||||    
T  3836 acacgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcatag 3778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 3036 - 2978
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||| ||||||||||   ||||||||||||  | ||||||||||||||||||||    
T  3036 acacgacacatgtccgacactgaaacacgcctaatatggggagtgtccgtgcttcatag 2978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 130459 - 130528
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaaaatcacataattaagtgtagttaca 70  Q
    ||||||||||||| |||||  || |||||  | ||| |||||||||||||||||||| |||||| |||||    
T  130459 cacgacacggacaatgacaagccgacacagttaatagtttgaaaaaatcacataattcagtgtaattaca 130528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 135313 - 135263
Alignment:
Q  78 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 128  Q
    ||||||||||||||| |||||||||||  |||| |||| ||||||||||||    
T  135313 cgtgtccgacaccaggacacgcctaatctgaggcgtgttcgtgcttcatag 135263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 5034 - 4974
Alignment:
Q  70 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 130  Q
    |||||||||||||||||||     ||| ||||||| ||||||||||| |||||||||||||    
T  5034 acacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcatagct 4974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10553 - 10509
Alignment:
Q  1 cacgacacggacactgacacaccaacacaactcataatttgaaaa 45  Q
    ||||||||||||||| ||||||| ||||| || ||||||||||||    
T  10553 cacgacacggacactaacacaccgacacagctaataatttgaaaa 10509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 7378 - 7330
Alignment:
Q  16 gacacaccaacacaactcataatttgaaaaaatcacataattaagtgta 64  Q
    ||||| || |||||||| |||||||| ||||||||||||||| ||||||    
T  7378 gacacgccgacacaactaataatttggaaaaatcacataatttagtgta 7330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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