View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12573_low_14 (Length: 239)
Name: NF12573_low_14
Description: NF12573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12573_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 24 - 223
Target Start/End: Original strand, 365289 - 365486
Alignment:
| Q |
24 |
ctttttatgttaatggatgagtgtgaattacctaattttaacttttaacaaaacttaagtcaagaaagccgactctccttctttcannnnnnnnnnncct |
123 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
365289 |
ctttttatgttaatggatgagtgtgaattacctaattttaacttttaacaaaacttaagtcaagaaagccgactctccttctttcattttttttt--cct |
365386 |
T |
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| Q |
124 |
ttctaataagcaaaatgaaaattgatggagtagaagaaatacttcaaaatcaaaatccgatacaaggagaactaaccactttgcaatgaaaaggtcattg |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
365387 |
ttctaataagcaaaatgaaaattgatggagtagaagaaatacttcaaaatcaaaatccgatacaaggagaactaaccactttgcaatgaaaaggtcattg |
365486 |
T |
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