View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12574_high_7 (Length: 207)
Name: NF12574_high_7
Description: NF12574
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12574_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 159; Significance: 7e-85; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 15847480 - 15847310
Alignment:
| Q |
20 |
ttgggtcatgaaggggtttggaaatcatcacatttgactttaaacaattatacaagtgagttgacatcatatcttaatccaaaaccttaatcattaggtt |
119 |
Q |
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| T |
15847480 |
ttgggtcatgaaggggtttgggaatcatcacatttgactttaaataattatacaagtgagttgacatcatatcttaatccaaaaccttaatcattaggtt |
15847381 |
T |
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| Q |
120 |
tatgtgttccctcgcttagattttccggtaagtgctataaattctaattgtataactcacaatatattctc |
190 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15847380 |
tatgtgttccctcgcttagattttccagtaagtgctataaattctaattgtataactcacaatatattctc |
15847310 |
T |
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