View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12576_low_2 (Length: 275)

Name: NF12576_low_2
Description: NF12576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12576_low_2
NF12576_low_2
[»] chr1 (52 HSPs)
chr1 (84-261)||(8447940-8448113)
chr1 (41-85)||(8447852-8447896)
chr1 (1-44)||(38713614-38713657)
chr1 (1-42)||(8411704-8411745)
chr1 (1-42)||(8447780-8447821)
chr1 (1-42)||(9008269-9008310)
chr1 (1-42)||(21486303-21486344)
chr1 (1-42)||(33054074-33054115)
chr1 (1-42)||(34040486-34040527)
chr1 (1-42)||(44632572-44632613)
chr1 (1-42)||(44789129-44789170)
chr1 (1-42)||(47214252-47214293)
chr1 (1-42)||(47721453-47721494)
chr1 (1-42)||(47728445-47728486)
chr1 (1-42)||(48220130-48220171)
chr1 (1-42)||(52362526-52362567)
chr1 (41-81)||(33358073-33358113)
chr1 (1-40)||(4514442-4514481)
chr1 (1-40)||(16986982-16987021)
chr1 (1-44)||(35539343-35539386)
chr1 (1-44)||(36577396-36577439)
chr1 (42-85)||(45383880-45383923)
chr1 (1-40)||(49241493-49241532)
chr1 (1-39)||(8200119-8200157)
chr1 (4-42)||(29586040-29586078)
chr1 (41-75)||(36494567-36494601)
chr1 (41-79)||(36673649-36673687)
chr1 (1-42)||(49931597-49931639)
chr1 (4-42)||(50882096-50882134)
chr1 (1-42)||(756900-756941)
chr1 (1-42)||(902682-902723)
chr1 (1-42)||(7128162-7128203)
chr1 (1-42)||(10890032-10890073)
chr1 (1-42)||(13489706-13489747)
chr1 (1-42)||(18336190-18336231)
chr1 (1-42)||(19969548-19969589)
chr1 (1-42)||(32915058-32915099)
chr1 (1-42)||(33024557-33024598)
chr1 (1-42)||(37588661-37588702)
chr1 (1-42)||(38303674-38303715)
chr1 (1-42)||(45417816-45417857)
chr1 (1-42)||(46911337-46911378)
chr1 (1-42)||(50433813-50433854)
chr1 (1-42)||(50781556-50781597)
chr1 (1-42)||(51286353-51286394)
chr1 (42-94)||(4469330-4469382)
chr1 (41-81)||(8200191-8200231)
chr1 (41-81)||(10889961-10890001)
chr1 (41-81)||(29147789-29147829)
chr1 (41-85)||(47721525-47721569)
chr1 (41-85)||(47728517-47728561)
chr1 (2-42)||(48624921-48624961)
[»] chr7 (25 HSPs)
chr7 (1-42)||(3293173-3293214)
chr7 (1-42)||(4713617-4713658)
chr7 (1-42)||(11564937-11564978)
chr7 (1-42)||(35452559-35452600)
chr7 (1-42)||(39231714-39231755)
chr7 (1-42)||(43573529-43573570)
chr7 (1-42)||(47078237-47078278)
chr7 (41-81)||(7817752-7817792)
chr7 (42-78)||(47500725-47500761)
chr7 (42-81)||(4713690-4713729)
chr7 (1-44)||(11352958-11353001)
chr7 (42-85)||(16980413-16980456)
chr7 (4-42)||(3343316-3343354)
chr7 (4-42)||(21023103-21023141)
chr7 (4-42)||(33180696-33180734)
chr7 (1-42)||(13729770-13729811)
chr7 (1-42)||(21559842-21559883)
chr7 (1-42)||(28036788-28036829)
chr7 (1-42)||(29162962-29163003)
chr7 (1-42)||(40353308-40353349)
chr7 (1-38)||(41458640-41458677)
chr7 (1-42)||(44184545-44184586)
chr7 (1-42)||(46532546-46532587)
chr7 (1-42)||(46812891-46812932)
chr7 (41-81)||(42926255-42926295)
[»] chr4 (49 HSPs)
chr4 (1-42)||(31076098-31076139)
chr4 (1-44)||(32696225-32696268)
chr4 (1-44)||(43769755-43769798)
chr4 (1-42)||(12112671-12112712)
chr4 (42-75)||(12799831-12799864)
chr4 (1-42)||(21617227-21617268)
chr4 (1-42)||(28458363-28458404)
chr4 (1-42)||(28657427-28657468)
chr4 (1-42)||(30079890-30079931)
chr4 (1-42)||(30170006-30170047)
chr4 (41-85)||(21172396-21172440)
chr4 (41-81)||(43769827-43769867)
chr4 (4-40)||(48335601-48335637)
chr4 (41-80)||(12138969-12139008)
chr4 (1-44)||(22819693-22819736)
chr4 (42-81)||(39344895-39344934)
chr4 (1-44)||(45851804-45851847)
chr4 (42-85)||(53299304-53299347)
chr4 (4-42)||(9118850-9118888)
chr4 (1-43)||(14527688-14527730)
chr4 (41-75)||(17475992-17476026)
chr4 (4-42)||(26206963-26207001)
chr4 (1-51)||(52846204-52846254)
chr4 (1-42)||(624298-624339)
chr4 (1-38)||(6494883-6494920)
chr4 (1-42)||(14451437-14451478)
chr4 (1-42)||(23822231-23822272)
chr4 (1-42)||(31657690-31657731)
chr4 (1-42)||(33860691-33860731)
chr4 (1-42)||(38338908-38338949)
chr4 (1-42)||(39344966-39345007)
chr4 (1-42)||(41082362-41082403)
chr4 (1-42)||(41486129-41486170)
chr4 (42-79)||(42959389-42959426)
chr4 (1-42)||(51194313-51194354)
chr4 (1-42)||(51852120-51852161)
chr4 (1-42)||(51887707-51887748)
chr4 (1-42)||(53654736-53654777)
chr4 (41-81)||(1815916-1815956)
chr4 (1-41)||(4949550-4949589)
chr4 (41-85)||(4949621-4949665)
chr4 (41-85)||(9362590-9362634)
chr4 (42-85)||(13263308-13263352)
chr4 (4-44)||(25318049-25318089)
chr4 (41-81)||(26718484-26718524)
chr4 (41-81)||(26731112-26731152)
chr4 (6-42)||(45143657-45143693)
chr4 (6-42)||(45152426-45152462)
chr4 (2-42)||(51573618-51573658)
[»] chr2 (48 HSPs)
chr2 (1-42)||(433894-433935)
chr2 (1-44)||(18723638-18723681)
chr2 (1-51)||(23352882-23352932)
chr2 (40-81)||(7648504-7648545)
chr2 (1-42)||(9377500-9377541)
chr2 (1-42)||(25881588-25881629)
chr2 (1-42)||(26206891-26206932)
chr2 (1-42)||(28245772-28245813)
chr2 (1-42)||(34119638-34119679)
chr2 (1-42)||(36802940-36802981)
chr2 (1-42)||(39449103-39449144)
chr2 (1-42)||(40937050-40937091)
chr2 (1-42)||(42678793-42678834)
chr2 (4-44)||(6940990-6941030)
chr2 (41-85)||(9377572-9377616)
chr2 (41-81)||(36211975-36212015)
chr2 (42-85)||(1836130-1836173)
chr2 (42-85)||(12498549-12498591)
chr2 (41-80)||(15245675-15245714)
chr2 (1-44)||(32869870-32869913)
chr2 (41-80)||(36517312-36517351)
chr2 (1-47)||(3012827-3012873)
chr2 (42-80)||(11167434-11167472)
chr2 (1-42)||(18876907-18876949)
chr2 (1-51)||(22525971-22526021)
chr2 (41-75)||(42866866-42866900)
chr2 (1-42)||(2221037-2221078)
chr2 (1-42)||(2841878-2841919)
chr2 (1-42)||(4758625-4758666)
chr2 (1-42)||(4952466-4952507)
chr2 (1-42)||(6999054-6999095)
chr2 (1-42)||(12889818-12889859)
chr2 (1-42)||(13347801-13347842)
chr2 (1-42)||(15269905-15269946)
chr2 (1-42)||(18176984-18177025)
chr2 (1-42)||(26277139-26277180)
chr2 (1-42)||(39213756-39213797)
chr2 (1-42)||(42866794-42866835)
chr2 (1-42)||(43513456-43513497)
chr2 (41-81)||(5054724-5054764)
chr2 (4-40)||(5200213-5200249)
chr2 (41-81)||(23352822-23352862)
chr2 (41-81)||(34119567-34119607)
chr2 (41-81)||(34431744-34431784)
chr2 (41-85)||(35589298-35589342)
chr2 (4-44)||(35705541-35705581)
chr2 (41-81)||(37105754-37105794)
chr2 (41-85)||(40936975-40937019)
[»] scaffold0532 (2 HSPs)
scaffold0532 (41-81)||(11080-11120)
scaffold0532 (1-42)||(11008-11049)
[»] chr8 (31 HSPs)
chr8 (1-44)||(30135999-30136042)
chr8 (42-81)||(30439421-30439460)
chr8 (1-44)||(42569713-42569756)
chr8 (4-42)||(18651417-18651455)
chr8 (1-42)||(1633876-1633917)
chr8 (1-42)||(11017849-11017890)
chr8 (1-42)||(29991456-29991497)
chr8 (1-42)||(30439492-30439533)
chr8 (1-42)||(34718159-34718200)
chr8 (1-42)||(38234051-38234092)
chr8 (1-42)||(41159875-41159916)
chr8 (1-42)||(45529232-45529273)
chr8 (41-85)||(12366959-12367003)
chr8 (41-81)||(42110098-42110138)
chr8 (42-81)||(8645281-8645320)
chr8 (41-80)||(31597064-31597103)
chr8 (4-42)||(6991794-6991832)
chr8 (4-42)||(9549185-9549223)
chr8 (41-75)||(14707264-14707298)
chr8 (4-42)||(33589216-33589254)
chr8 (8-42)||(40739898-40739932)
chr8 (1-42)||(4994425-4994466)
chr8 (1-42)||(7473012-7473053)
chr8 (1-42)||(7592893-7592934)
chr8 (1-42)||(7955993-7956034)
chr8 (1-42)||(16327138-16327179)
chr8 (1-42)||(16613678-16613719)
chr8 (1-42)||(16966829-16966870)
chr8 (4-41)||(41521015-41521052)
chr8 (4-40)||(5864250-5864286)
chr8 (41-81)||(7478895-7478935)
[»] chr6 (22 HSPs)
chr6 (1-43)||(15318173-15318215)
chr6 (4-42)||(26832693-26832731)
chr6 (1-42)||(868938-868979)
chr6 (1-42)||(2075437-2075478)
chr6 (1-42)||(4820295-4820336)
chr6 (1-42)||(6531169-6531210)
chr6 (5-42)||(22341160-22341197)
chr6 (1-42)||(30036780-30036821)
chr6 (1-42)||(30152516-30152557)
chr6 (1-42)||(33421804-33421845)
chr6 (4-42)||(11547515-11547553)
chr6 (1-42)||(32459502-32459544)
chr6 (42-75)||(335178-335211)
chr6 (1-42)||(13143368-13143409)
chr6 (1-42)||(14699650-14699691)
chr6 (1-42)||(18141287-18141328)
chr6 (1-42)||(20822854-20822895)
chr6 (5-42)||(32046746-32046783)
chr6 (1-42)||(35213547-35213588)
chr6 (41-81)||(5028181-5028221)
chr6 (41-81)||(6531095-6531135)
chr6 (41-81)||(35213476-35213516)
[»] chr5 (31 HSPs)
chr5 (1-42)||(4430922-4430963)
chr5 (1-42)||(8267806-8267847)
chr5 (1-42)||(15267828-15267869)
chr5 (1-42)||(18842307-18842348)
chr5 (1-42)||(20770175-20770216)
chr5 (1-42)||(30640834-30640875)
chr5 (1-42)||(35098991-35099032)
chr5 (1-42)||(41175692-41175733)
chr5 (41-85)||(3640108-3640152)
chr5 (41-81)||(15952960-15953000)
chr5 (41-81)||(41175621-41175661)
chr5 (1-40)||(1839333-1839372)
chr5 (1-40)||(3640185-3640224)
chr5 (1-40)||(39628833-39628872)
chr5 (4-42)||(15478705-15478743)
chr5 (1-42)||(189689-189730)
chr5 (1-42)||(2688972-2689013)
chr5 (1-42)||(4098655-4098696)
chr5 (1-42)||(5042292-5042333)
chr5 (1-42)||(6292165-6292206)
chr5 (1-42)||(6517756-6517797)
chr5 (1-42)||(9581623-9581664)
chr5 (1-42)||(19481168-19481209)
chr5 (1-38)||(19839976-19840013)
chr5 (42-75)||(35098926-35098959)
chr5 (1-42)||(37700504-37700545)
chr5 (1-42)||(43196611-43196652)
chr5 (1-42)||(43441782-43441823)
chr5 (41-81)||(9226416-9226456)
chr5 (41-81)||(10649551-10649591)
chr5 (1-41)||(21064213-21064253)
[»] chr3 (33 HSPs)
chr3 (1-42)||(8821674-8821715)
chr3 (1-42)||(11633657-11633698)
chr3 (1-42)||(26996360-26996401)
chr3 (1-42)||(32421615-32421656)
chr3 (1-42)||(37927191-37927232)
chr3 (1-42)||(49761351-49761392)
chr3 (41-81)||(9158788-9158828)
chr3 (41-85)||(33795636-33795680)
chr3 (4-42)||(8846538-8846576)
chr3 (4-42)||(32767723-32767761)
chr3 (4-42)||(33375907-33375945)
chr3 (41-75)||(35201461-35201495)
chr3 (4-42)||(44677470-44677508)
chr3 (43-85)||(51343526-51343568)
chr3 (1-42)||(390853-390894)
chr3 (1-42)||(10206959-10207000)
chr3 (1-42)||(21196168-21196209)
chr3 (1-38)||(24095396-24095433)
chr3 (1-42)||(24482949-24482990)
chr3 (1-42)||(30909073-30909114)
chr3 (1-42)||(31376751-31376792)
chr3 (1-42)||(37508484-37508525)
chr3 (1-42)||(39697208-39697249)
chr3 (1-42)||(43905017-43905058)
chr3 (1-42)||(46019506-46019547)
chr3 (1-42)||(49363237-49363278)
chr3 (1-42)||(49417619-49417660)
chr3 (1-42)||(50206956-50206997)
chr3 (1-42)||(55400043-55400084)
chr3 (4-44)||(16675510-16675550)
chr3 (41-81)||(21005091-21005131)
chr3 (41-81)||(46852047-46852087)
chr3 (41-85)||(49761423-49761467)
[»] scaffold0204 (1 HSPs)
scaffold0204 (4-40)||(23123-23159)
[»] scaffold0687 (1 HSPs)
scaffold0687 (1-42)||(2241-2282)


Alignment Details
Target: chr1 (Bit Score: 161; Significance: 6e-86; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 84 - 261
Target Start/End: Original strand, 8447940 - 8448113
Alignment:
Q  84 aacaattattttttcatatatcctcagagaatctatactacttaaaaagaaatttacaacaagcacaccccaacccaaattctaagaatctcctaaagga 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8447940 aacaattattttttcatatatcctcagagaatctatactacttaaaaagaaatttacaacaagcacaccccaacccaaattctaagaatctcctaaagga 8448039  T
Q  184 caatgaatcacctccatgcatgctgctcttcttcacccaatacatcagttgactaagatattcttaacatacttactg 261  Q
    ||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8448040 caatgaatcacctc----catgctgctcttcttcacccaatacatcagttgactaagatattcttaacatacttactg 8448113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 8447852 - 8447896
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaactaaa 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  8447852 ctttttctttgtaaattatgattgtcacataagttatcaactaaa 8447896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38713614 - 38713657
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctcttt 44  Q
    |||||||||||||||||||| || ||||||||||||||||||||    
T  38713614 aactttctctctcatattcatattattttttactttatctcttt 38713657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8411745 - 8411704
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  8411745 aactttctctctcatactcacattattttttactttatctct 8411704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8447780 - 8447821
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||| ||| |||||||||||||||||||||||||    
T  8447780 aactttctctcttatactcacatcattttttactttatctct 8447821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9008269 - 9008310
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  9008269 aactttctctctcatactcacattattttttactttatctct 9008310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21486344 - 21486303
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  21486344 aactttctctctcatactcacattattttttactttatctct 21486303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33054115 - 33054074
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  33054115 aactttctctctcatactcacattattttttactttatctct 33054074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34040527 - 34040486
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  34040527 aactttctctctcatactcacattattttttactttatctct 34040486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44632572 - 44632613
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  44632572 aactttctctctcatactcacattattttttactttatctct 44632613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 44789170 - 44789129
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||| ||||| |||||||||||||||||||||||||    
T  44789170 aactttctctttcatactcacatcattttttactttatctct 44789129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 47214252 - 47214293
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  47214252 aactttctctctcatactcacattattttttactttatctct 47214293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 47721453 - 47721494
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  47721453 aactttctgtctcatattcacattattttttactttatctct 47721494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 47728445 - 47728486
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||| |||||||||||||| ||||||||||||||||||    
T  47728445 aactttctgtctcatattcacattattttttactttatctct 47728486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 48220171 - 48220130
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  48220171 aactttctctctcatactcacattattttttactttatctct 48220130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 52362526 - 52362567
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  52362526 aactttctctctcatactcacattattttttactttatctct 52362567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 33358113 - 33358073
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  33358113 ctttttctttgtaaattatggttgtcacataagttgtcaac 33358073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 4514481 - 4514442
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatct 40  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  4514481 aactttctatctcatattcacattattttttactttatct 4514442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 16986982 - 16987021
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatct 40  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  16986982 aactttctctctcatactcacattattttttactttatct 16987021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 35539386 - 35539343
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctcttt 44  Q
    ||||||| |||| |||||||||| ||||||||||||||||||||    
T  35539386 aactttcactcttatattcacattattttttactttatctcttt 35539343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36577439 - 36577396
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctcttt 44  Q
    |||||||||||||||| |||||| | ||||||||||||||||||    
T  36577439 aactttctctctcatactcacattactttttactttatctcttt 36577396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 45383923 - 45383880
Alignment:
Q  42 tttttctttgtaaattatgattgtcacataagttatcaactaaa 85  Q
    |||||||||||||||||||||| |  ||||||||||||||||||    
T  45383923 tttttctttgtaaattatgattatttcataagttatcaactaaa 45383880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 49241532 - 49241493
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatct 40  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  49241532 aactttctctctcatactcacattattttttactttatct 49241493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8200119 - 8200157
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatc 39  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  8200119 aactttctctctcatactcacattattttttactttatc 8200157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 29586040 - 29586078
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  29586040 tttctctctcatactcacattattttttactttatctct 29586078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 36494567 - 36494601
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagtt 75  Q
    ||||||||||||||||||||||||||| |||||||    
T  36494567 ctttttctttgtaaattatgattgtcaaataagtt 36494601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 36673687 - 36673649
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatca 79  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  36673687 ctttttctttgtaaattatggttgtcaaataagttatca 36673649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 49931597 - 49931639
Alignment:
Q  1 aactttctctctcatattcacatcat-tttttactttatctct 42  Q
    ||||||||||||||||||||||| || ||||||||||||||||    
T  49931597 aactttctctctcatattcacattatatttttactttatctct 49931639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 50882134 - 50882096
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  50882134 tttctctctcatatttacattattttttactttatctct 50882096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 756900 - 756941
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||| ||||||| |||||| ||||||||||||||||||    
T  756900 aactttctttctcatactcacattattttttactttatctct 756941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 902682 - 902723
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  902682 aactttctctctcatactcacattactttttactttatctct 902723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7128162 - 7128203
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||    
T  7128162 aacttcctctctcatattcacattattttctactttatctct 7128203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10890073 - 10890032
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  10890073 aactttctctctcatactcacattactttttactttatctct 10890032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13489706 - 13489747
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  13489706 aactttctctctcatactcacattactttttactttatctct 13489747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18336190 - 18336231
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  18336190 aactttctctctcatactcacattagtttttactttatctct 18336231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19969589 - 19969548
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  19969589 aactttctctctcatactcacattactttttactttatctct 19969548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32915099 - 32915058
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  32915099 aactttctctctcatactcacattactttttactttatctct 32915058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33024598 - 33024557
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||| ||||||||||    
T  33024598 aactttctctctcatactcacattatttttttctttatctct 33024557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37588702 - 37588661
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||| ||||| |||||| ||||||||||||||||||    
T  37588702 aactttctctttcatactcacataattttttactttatctct 37588661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38303715 - 38303674
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| || ||| ||||||||||||||||||    
T  38303715 aactttctctctcatactcgcattattttttactttatctct 38303674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 45417816 - 45417857
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||| ||||||| ||||||||||||||| |||||||||    
T  45417816 aactttctttctcatactcacatcattttttaatttatctct 45417857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 46911337 - 46911378
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||| ||| ||||| |||||||||||||||||||||||||    
T  46911337 aactttttctttcatactcacatcattttttactttatctct 46911378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 50433813 - 50433854
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||| ||| |||||| ||||||||||||||||||    
T  50433813 aactttctctcttatactcacataattttttactttatctct 50433854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 50781597 - 50781556
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  50781597 aactttctctctcatactcacattactttttactttatctct 50781556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 51286394 - 51286353
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| |||||||| |||||||||    
T  51286394 aactttctctctcatactcacattattttttattttatctct 51286353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 94
Target Start/End: Complemental strand, 4469382 - 4469330
Alignment:
Q  42 tttttctttgtaaattatgattgtcacataagttatcaactaaacaattattt 94  Q
    |||||||||||||||||||||||||  ||| ||| ||||| ||| ||||||||    
T  4469382 tttttctttgtaaattatgattgtcttatacgttgtcaaccaaataattattt 4469330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 8200191 - 8200231
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||||||||| ||||| |||||||| |||||    
T  8200191 ctttttctttgtaaattatggttgtcccataagttgtcaac 8200231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 10890001 - 10889961
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||||||||| |||||||| ||||| |||||    
T  10890001 ctttttctttgtaaattatggttgtcacaaaagttgtcaac 10889961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 29147829 - 29147789
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    ||||| |||||||||||||| ||||||||||| ||||||||    
T  29147829 cttttcctttgtaaattatggttgtcacataaattatcaac 29147789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 47721525 - 47721569
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaactaaa 85  Q
    |||||||||||||||||||| ||||| |||||||| || ||||||    
T  47721525 ctttttctttgtaaattatggttgtcccataagttgtccactaaa 47721569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 47728517 - 47728561
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaactaaa 85  Q
    |||||||||||||||||||| ||||| |||||||| || ||||||    
T  47728517 ctttttctttgtaaattatggttgtcccataagttgtccactaaa 47728561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 48624921 - 48624961
Alignment:
Q  2 actttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||| ||| |||||| ||||||||||||||||||    
T  48624921 actttctctcttatactcacattattttttactttatctct 48624961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3293173 - 3293214
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  3293173 aactttctctctcatattcacataattttttactttatctct 3293214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4713617 - 4713658
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||| |||||||| ||||||||||||||||||    
T  4713617 aactttctctctcaaattcacattattttttactttatctct 4713658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11564937 - 11564978
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  11564937 aactttctctctcatactcacattattttttactttatctct 11564978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 35452600 - 35452559
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  35452600 aactttctctctcatactcacataattttttactttatctct 35452559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39231755 - 39231714
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  39231755 aactttctctctcatactcacattattttttactttatctct 39231714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 43573570 - 43573529
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||||||||||||||| | ||||||||||||||||    
T  43573570 aactttctctctcatattcacattactttttactttatctct 43573529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 47078278 - 47078237
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  47078278 aactttctctctcatactcacattattttttactttatctct 47078237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 7817752 - 7817792
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  7817752 ctttttctttgtaaattatggttgtcacataagttgtcaac 7817792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 47500725 - 47500761
Alignment:
Q  42 tttttctttgtaaattatgattgtcacataagttatc 78  Q
    ||||||||||||||||||||||||| |||||||||||    
T  47500725 tttttctttgtaaattatgattgtcgcataagttatc 47500761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 4713690 - 4713729
Alignment:
Q  42 tttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    ||||||||||||||||||| |||||||||||||| |||||    
T  4713690 tttttctttgtaaattatggttgtcacataagttgtcaac 4713729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11353001 - 11352958
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctcttt 44  Q
    |||||||||||||||| |||||| | ||||||||||||||||||    
T  11353001 aactttctctctcatactcacattactttttactttatctcttt 11352958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 16980413 - 16980456
Alignment:
Q  42 tttttctttgtaaattatgattgtcacataagttatcaactaaa 85  Q
    ||||||||||||||||||||||||| || ||||| |||||||||    
T  16980413 tttttctttgtaaattatgattgtctcaaaagttgtcaactaaa 16980456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 3343354 - 3343316
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  3343354 tttctctctcatattcacattactttttactttatctct 3343316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 21023141 - 21023103
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  21023141 tttctctttcatattcacattattttttactttatctct 21023103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 33180734 - 33180696
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  33180734 tttctctctcatactcacattattttttactttatctct 33180696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13729770 - 13729811
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||| ||||||| |||||| ||||||||||||||||||    
T  13729770 aactttctttctcatactcacattattttttactttatctct 13729811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21559842 - 21559883
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||| ||||||||| |||||| ||||||||||||||||||    
T  21559842 aactttatctctcatactcacattattttttactttatctct 21559883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28036788 - 28036829
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||| ||| |||||| ||||||||||||||||||    
T  28036788 aactttctctcttatactcacattattttttactttatctct 28036829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 29163003 - 29162962
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  29163003 aactttctctctcatactcacattactttttactttatctct 29162962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 40353308 - 40353349
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| |||||||| |||||||||    
T  40353308 aactttctctctcatactcacattattttttattttatctct 40353349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 41458640 - 41458677
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttat 38  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  41458640 aactttctctctcatactcacattattttttactttat 41458677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 44184586 - 44184545
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  44184586 aactttctctctcatactcacattactttttactttatctct 44184545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 46532546 - 46532587
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||| |||||| |||||| ||||||||||||||||||    
T  46532546 aactttctcactcatactcacattattttttactttatctct 46532587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 46812932 - 46812891
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||| ||||| |||| ||||||||||||||||||    
T  46812932 aactttctctcttatatttacattattttttactttatctct 46812891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 42926255 - 42926295
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||||||||| ||||||||||| || |||||    
T  42926255 ctttttctttgtaaattatggttgtcacataaattgtcaac 42926295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31076098 - 31076139
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  31076098 aactttctctctcatactcacatcattttttactttatctct 31076139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 32696225 - 32696268
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctcttt 44  Q
    |||||||||||||||||||||||  |||||||||||||||||||    
T  32696225 aactttctctctcatattcacattgttttttactttatctcttt 32696268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43769755 - 43769798
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctcttt 44  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  43769755 aactttctctctcatactcacattattttttactttatctcttt 43769798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12112671 - 12112712
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  12112671 aactttctctctcatattcatattattttttactttatctct 12112712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 75
Target Start/End: Original strand, 12799831 - 12799864
Alignment:
Q  42 tttttctttgtaaattatgattgtcacataagtt 75  Q
    ||||||||||||||||||||||||||||||||||    
T  12799831 tttttctttgtaaattatgattgtcacataagtt 12799864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21617227 - 21617268
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  21617227 aactttctctctcatactcacattattttttactttatctct 21617268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28458404 - 28458363
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  28458404 aactttctctctcatactcacattattttttactttatctct 28458363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28657468 - 28657427
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  28657468 aactttctctctcatactcacattattttttactttatctct 28657427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30079890 - 30079931
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  30079890 aactttctctctcatactcacattattttttactttatctct 30079931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30170047 - 30170006
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  30170047 aactttctctctcatactcacattattttttactttatctct 30170006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 21172396 - 21172440
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaactaaa 85  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||    
T  21172396 ctttttctttgtaaattatgattatcccataaattatcaactaaa 21172440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 43769827 - 43769867
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||||||||| ||||| ||||||||||||||    
T  43769827 ctttttctttgtaaattatggttgtcgcataagttatcaac 43769867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 48335601 - 48335637
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatct 40  Q
    |||||||||||||||||||| ||||||||||||||||    
T  48335601 tttctctctcatattcacattattttttactttatct 48335637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 12138969 - 12139008
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaa 80  Q
    |||||||||||||||||||| |||| ||||||||||||||    
T  12138969 ctttttctttgtaaattatggttgttacataagttatcaa 12139008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22819693 - 22819736
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctcttt 44  Q
    |||||||||||||||| |||||| | ||||||||||||||||||    
T  22819693 aactttctctctcatactcacattactttttactttatctcttt 22819736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 39344934 - 39344895
Alignment:
Q  42 tttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  39344934 tttttctttgtaaattatgattgtctcaaaagttatcaac 39344895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45851804 - 45851847
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctcttt 44  Q
    |||||| ||| ||||| |||||||||||||||||||||||||||    
T  45851804 aactttttctttcatactcacatcattttttactttatctcttt 45851847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 53299304 - 53299347
Alignment:
Q  42 tttttctttgtaaattatgattgtcacataagttatcaactaaa 85  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||    
T  53299304 tttttctttgtaaatcatgcttgtcatataagttatcaactaaa 53299347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 9118888 - 9118850
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  9118888 tttctctctcataatcacattattttttactttatctct 9118850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 14527688 - 14527730
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctctt 43  Q
    ||||||| |||||||| |||||| |||||||||||||||||||    
T  14527688 aactttcactctcatactcacattattttttactttatctctt 14527730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 17475992 - 17476026
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagtt 75  Q
    ||||||||||||||||||||||||||| |||||||    
T  17475992 ctttttctttgtaaattatgattgtcaaataagtt 17476026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 26207001 - 26206963
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  26207001 tttctctctcatattcacattactttttactttatctct 26206963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 52846254 - 52846204
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctctttttctttg 51  Q
    |||||||||||||||| |||||| | |||||||||||||||| || |||||    
T  52846254 aactttctctctcatactcacattactttttactttatctctattgctttg 52846204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 624339 - 624298
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  624339 aactttctctctcatactcacattactttttactttatctct 624298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 6494920 - 6494883
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttat 38  Q
    |||||||||||||||||||| || ||||||||||||||    
T  6494920 aactttctctctcatattcatattattttttactttat 6494883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14451437 - 14451478
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  14451437 aactttctctctcatactcacattagtttttactttatctct 14451478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23822272 - 23822231
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||| |||||||||| || ||||||||||||||||||    
T  23822272 aactttctccctcatattcatattattttttactttatctct 23822231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31657690 - 31657731
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  31657690 aactttctctctcatactcacattactttttactttatctct 31657731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33860691 - 33860731
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||||| ||||||||||||||||    
T  33860691 aactttctctctcatactcacatca-tttttactttatctct 33860731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38338949 - 38338908
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  38338949 aactttctctctcatactcacattactttttactttatctct 38338908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39345007 - 39344966
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  39345007 aactttctctctcatactcacattactttttactttatctct 39344966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41082362 - 41082403
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| |||||| |||||||||||    
T  41082362 aactttctctctcatactcacattatttttcactttatctct 41082403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41486170 - 41486129
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  41486170 aactttctctctcatactcacattactttttactttatctct 41486129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 42959389 - 42959426
Alignment:
Q  42 tttttctttgtaaattatgattgtcacataagttatca 79  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  42959389 tttttctttgtaaaatatgattgtcaaataagttatca 42959426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 51194313 - 51194354
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||| ||||| |||||||| ||||||||||||||||    
T  51194313 aactttctctttcatactcacatcactttttactttatctct 51194354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 51852120 - 51852161
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||| |||| ||||||||||| ||||||||||||||||||    
T  51852120 aactttttctcccatattcacattattttttactttatctct 51852161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 51887707 - 51887748
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| ||| || ||||||||||||||||||    
T  51887707 aactttctctctcatactcaaattattttttactttatctct 51887748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 53654777 - 53654736
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||| ||||||||| || ||||||||||||||||||    
T  53654777 aactttctctttcatattcatattattttttactttatctct 53654736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 1815956 - 1815916
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    ||||||||||||||||||||  ||||||||||||| |||||    
T  1815956 ctttttctttgtaaattatggctgtcacataagttgtcaac 1815916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4949550 - 4949589
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctc 41  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  4949550 aactttctctctcatactcacatca-tttttactttatctc 4949589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 4949621 - 4949665
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaactaaa 85  Q
    |||||||||||||||||||  ||||| |||||||| |||||||||    
T  4949621 ctttttctttgtaaattatagttgtcgcataagttgtcaactaaa 4949665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 9362634 - 9362590
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaactaaa 85  Q
    |||||||||| |||| |||| |||||||| |||||||||||||||    
T  9362634 ctttttctttataaactatggttgtcacaaaagttatcaactaaa 9362590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 13263352 - 13263308
Alignment:
Q  42 tttttctttgtaaattatgattgt-cacataagttatcaactaaa 85  Q
    |||||||||| ||||||||||||| | ||||||||||||||||||    
T  13263352 tttttctttgcaaattatgattgtccccataagttatcaactaaa 13263308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 25318089 - 25318049
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctcttt 44  Q
    ||||||||||||| ||| || ||||||||||||||||||||    
T  25318089 tttctctctcatactcatattattttttactttatctcttt 25318049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 26718484 - 26718524
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||||||||||||||| || || ||||||||    
T  26718484 ctttttctttgtaaattatgattgtcccaaaaattatcaac 26718524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 26731112 - 26731152
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||||||||||||||| || || ||||||||    
T  26731112 ctttttctttgtaaattatgattgtcccaaaaattatcaac 26731152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 45143693 - 45143657
Alignment:
Q  6 tctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  45143693 tctctctcataatcacattattttttactttatctct 45143657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 45152462 - 45152426
Alignment:
Q  6 tctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  45152462 tctctctcataatcacattattttttactttatctct 45152426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 51573658 - 51573618
Alignment:
Q  2 actttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||| ||||| |||||| ||||||||||||||||||    
T  51573658 actttctctttcatactcacattattttttactttatctct 51573618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 433894 - 433935
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  433894 aactttctctctcatactcacatcattttttactttatctct 433935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18723638 - 18723681
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctcttt 44  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  18723638 aactttctctctcatactcacattattttttactttatctcttt 18723681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23352932 - 23352882
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctctttttctttg 51  Q
    |||||||||||||||| |||||| |||||||||||||||||| || |||||    
T  23352932 aactttctctctcatactcacattattttttactttatctctattgctttg 23352882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 7648504 - 7648545
Alignment:
Q  40 tctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  7648504 tctttttctttgtaaattatgattgttgcataagttatcaac 7648545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9377500 - 9377541
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||||||||||||||| | ||||||||||||||||    
T  9377500 aactttctctctcatattcacattactttttactttatctct 9377541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25881588 - 25881629
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  25881588 aactttctctctcatactcacattattttttactttatctct 25881629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 26206891 - 26206932
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  26206891 aactttctctctcatactcacattattttttactttatctct 26206932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28245772 - 28245813
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  28245772 aactttctctctcatactcacattattttttactttatctct 28245813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34119679 - 34119638
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  34119679 aactttctctctcatactcacattattttttactttatctct 34119638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36802940 - 36802981
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  36802940 aactttctctctcatactcacattattttttactttatctct 36802981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39449144 - 39449103
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||| ||||| |||||||||||||||||||||||||    
T  39449144 aactttctctttcatactcacatcattttttactttatctct 39449103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40937091 - 40937050
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  40937091 aactttctctctcatactcacattattttttactttatctct 40937050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 42678793 - 42678834
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  42678793 aactttctctctcatactcacattattttttactttatctct 42678834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 6940990 - 6941030
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctcttt 44  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  6940990 tttctttcttatattcacatcattttttactttatctcttt 6941030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 9377572 - 9377616
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaactaaa 85  Q
    ||||||||||||||||||||| |||| |||||||| |||||||||    
T  9377572 ctttttctttgtaaattatgactgtctcataagttgtcaactaaa 9377616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 36212015 - 36211975
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||| ||||||||||||||||||||| ||||||||    
T  36212015 ctttttctttataaattatgattgtcacataatttatcaac 36211975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 85
Target Start/End: Original strand, 1836130 - 1836173
Alignment:
Q  42 tttttctttgtaaattatgattgtcacataagttatcaactaaa 85  Q
    ||||||||||||||||||| ||||| ||||| ||||||||||||    
T  1836130 tttttctttgtaaattatggttgtctcataatttatcaactaaa 1836173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 85
Target Start/End: Complemental strand, 12498591 - 12498549
Alignment:
Q  42 tttttctttgtaaattatgattgtcacataagttatcaactaaa 85  Q
    ||||||||||||||||||||||||||||||| || |||||||||    
T  12498591 tttttctttgtaaattatgattgtcacataa-ttgtcaactaaa 12498549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 15245714 - 15245675
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaa 80  Q
    |||||||||||||||||||||||||| |||||||| ||||    
T  15245714 ctttttctttgtaaattatgattgtctcataagttgtcaa 15245675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 32869870 - 32869913
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctcttt 44  Q
    |||||||||| ||||||| |||| ||||||||||||||||||||    
T  32869870 aactttctctttcatatttacattattttttactttatctcttt 32869913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 36517312 - 36517351
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaa 80  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  36517312 ctttttctttgtaaattatgattgtcccaaaagttatcaa 36517351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3012873 - 3012827
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctctttttc 47  Q
    |||||||||||||||| | |||| |||||||||||||||||| ||||    
T  3012873 aactttctctctcatacttacattattttttactttatctctatttc 3012827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 11167472 - 11167434
Alignment:
Q  42 tttttctttgtaaattatgattgtcacataagttatcaa 80  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  11167472 tttttctttgtaaattatggttgttacataagttatcaa 11167434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18876949 - 18876907
Alignment:
Q  1 aactttctctctcatattcacatca-ttttttactttatctct 42  Q
    ||||||||||||||||||||||| | |||||||||||||||||    
T  18876949 aactttctctctcatattcacataatttttttactttatctct 18876907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22526021 - 22525971
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctctttttctttg 51  Q
    |||||||||| | |||||||||| |||||||||||||||||| || |||||    
T  22526021 aactttctcttttatattcacattattttttactttatctctattgctttg 22525971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 42866866 - 42866900
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagtt 75  Q
    |||||||||||||||||||||||||||| ||||||    
T  42866866 ctttttctttgtaaattatgattgtcacgtaagtt 42866900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2221037 - 2221078
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| |||||| |||||||||||    
T  2221037 aactttctctctcatactcacattatttttcactttatctct 2221078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2841878 - 2841919
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||| ||||||| |||||| ||||||||||||||||||    
T  2841878 aactttctttctcatactcacattattttttactttatctct 2841919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4758666 - 4758625
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||| |||||||||||| |||||||| |||||||||    
T  4758666 aactttctctttcatattcacattattttttattttatctct 4758625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4952507 - 4952466
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||| | |||||||||||| ||||||||||||||||||    
T  4952507 aactttctatttcatattcacattattttttactttatctct 4952466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6999095 - 6999054
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  6999095 aactttctctctcatactcacattactttttactttatctct 6999054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12889859 - 12889818
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| |||||||| |||||||||    
T  12889859 aactttctctctcatactcacattattttttaatttatctct 12889818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 13347842 - 13347801
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  13347842 aactttctctctcatactcacattactttttactttatctct 13347801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15269905 - 15269946
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||| |||||||||||| | ||||||||||||||||    
T  15269905 aactttctctttcatattcacattactttttactttatctct 15269946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18176984 - 18177025
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||| ||||||||||    
T  18176984 aactttctctctcatactcacattatttttttctttatctct 18177025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 26277139 - 26277180
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||| ||| |||||| ||||||||||||||||||    
T  26277139 aactttctctcttatactcacattattttttactttatctct 26277180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39213797 - 39213756
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||| ||||||||| |||||| ||||||||||||||||||    
T  39213797 aactttatctctcatactcacattattttttactttatctct 39213756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 42866794 - 42866835
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||| ||||||||| |||||| ||||||||||||||||||    
T  42866794 aactttttctctcatactcacattattttttactttatctct 42866835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43513456 - 43513497
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||| ||||| |||| ||||||||||||||||||||    
T  43513456 aactttctctttcatactcacgtcattttttactttatctct 43513497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 5054724 - 5054764
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||||||||  |||||||||||||| |||||    
T  5054724 ctttttctttgtaaattattgttgtcacataagttgtcaac 5054764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 5200249 - 5200213
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatct 40  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  5200249 tttctctatcatatttacatcattttttactttatct 5200213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 23352862 - 23352822
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||||||||| ||||| |||||||| |||||    
T  23352862 ctttttctttgtaaattatggttgtcccataagttgtcaac 23352822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 34119607 - 34119567
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    ||||||||||||||||||||| |||| |||||||| |||||    
T  34119607 ctttttctttgtaaattatgagtgtctcataagttgtcaac 34119567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 34431784 - 34431744
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||| ||||| ||||||| ||||||||||||    
T  34431784 ctttttctttgtaagttatggttgtcacgtaagttatcaac 34431744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 35589342 - 35589298
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaactaaa 85  Q
    |||||||||||||||||||| ||||| || || ||||||||||||    
T  35589342 ctttttctttgtaaattatggttgtcccaaaaattatcaactaaa 35589298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 35705541 - 35705581
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctcttt 44  Q
    ||||||||||||| |||||| || |||||||||||||||||    
T  35705541 tttctctctcatactcacattatattttactttatctcttt 35705581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 37105754 - 37105794
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||||||||| |||||||| ||||| |||||    
T  37105754 ctttttctttgtaaattatggttgtcacaaaagttgtcaac 37105794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 40937019 - 40936975
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaactaaa 85  Q
    |||||||||||||||||||| ||||||||||| || ||| |||||    
T  40937019 ctttttctttgtaaattatggttgtcacataaattgtcagctaaa 40936975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 11080 - 11120
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  11080 ctttttctttgtaaattatgattgtcacataagttgtcaac 11120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11008 - 11049
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  11008 aactttctctctcatactcacattattttttactttatctct 11049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30136042 - 30135999
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctcttt 44  Q
    ||||||||||||||||||||||| | ||||||||||||||||||    
T  30136042 aactttctctctcatattcacattactttttactttatctcttt 30135999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 30439460 - 30439421
Alignment:
Q  42 tttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  30439460 tttttctttgtaaattatggttgtcacataagttatcaac 30439421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42569756 - 42569713
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctcttt 44  Q
    ||||||||||||||||||||||| | ||||||||||||||||||    
T  42569756 aactttctctctcatattcacattactttttactttatctcttt 42569713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 18651417 - 18651455
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  18651417 tttctctctcatactcacatcattttttactttatctct 18651455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1633917 - 1633876
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  1633917 aactttctctctcatactcacattattttttactttatctct 1633876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11017849 - 11017890
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  11017849 aactttctctctcatactcacattattttttactttatctct 11017890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 29991456 - 29991497
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||| ||||| |||||||||||||||||||||||||    
T  29991456 aactttctctttcatactcacatcattttttactttatctct 29991497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30439533 - 30439492
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  30439533 aactttctctctcatactcacattattttttactttatctct 30439492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 34718159 - 34718200
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  34718159 aactttctctctcatactcacattattttttactttatctct 34718200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 38234051 - 38234092
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  38234051 aactttctctctcatactcacataattttttactttatctct 38234092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41159916 - 41159875
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  41159916 aactttctctctcatactcacattattttttactttatctct 41159875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 45529273 - 45529232
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  45529273 aactttctctctcatactcacattattttttactttatctct 45529232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 12367003 - 12366959
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaactaaa 85  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||    
T  12367003 ctttttctttataaattatggttgtcagataagttatcaactaaa 12366959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 42110138 - 42110098
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||||||||||| |||||||||||| |||||    
T  42110138 ctttttctttgtaaattatgatcgtcacataagttgtcaac 42110098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 8645281 - 8645320
Alignment:
Q  42 tttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  8645281 tttttctttgtaaaatatgattatcacataagttatcaac 8645320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 31597064 - 31597103
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaa 80  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  31597064 ctttttctttgtaaattatgattgtctcaaaagttatcaa 31597103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 6991832 - 6991794
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  6991832 tttctctctcatactcacattattttttactttatctct 6991794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 9549223 - 9549185
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  9549223 tttctctctcatactcacattattttttactttatctct 9549185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 14707298 - 14707264
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagtt 75  Q
    |||||||||||||||||||||||||| ||||||||    
T  14707298 ctttttctttgtaaattatgattgtctcataagtt 14707264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 33589254 - 33589216
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  33589254 tttctctctcatactcacattattttttactttatctct 33589216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 40739932 - 40739898
Alignment:
Q  8 tctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| ||||||||||||||||||    
T  40739932 tctctcatattcacattattttttactttatctct 40739898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4994425 - 4994466
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||| ||||||||| |||||| ||||||||||||||||||    
T  4994425 aactttatctctcatactcacattattttttactttatctct 4994466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7473053 - 7473012
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  7473053 aactttctctctcatactcacattactttttactttatctct 7473012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7592893 - 7592934
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||| ||||||||| |||||| ||||||||||||||||||    
T  7592893 aactttatctctcatagtcacattattttttactttatctct 7592934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7956034 - 7955993
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  7956034 aactttctctctcatactcacattactttttactttatctct 7955993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16327179 - 16327138
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  16327179 aactttctctctcatactcacattactttttactttatctct 16327138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16613678 - 16613719
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||| ||||||||| |||||| ||||||||||||||||||    
T  16613678 aactttttctctcatactcacattattttttactttatctct 16613719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16966829 - 16966870
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||| ||||||||||||    
T  16966829 aactttctctctcatactcacattattttctactttatctct 16966870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 41521015 - 41521052
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctc 41  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  41521015 tttctctctcatactcacattattttttactttatctc 41521052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 5864250 - 5864286
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatct 40  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  5864250 tttctctctcataatcacattattttttactttatct 5864286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 7478895 - 7478935
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    ||||||||||||||||||||||||||| ||| ||| |||||    
T  7478895 ctttttctttgtaaattatgattgtcaaataggttgtcaac 7478935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15318215 - 15318173
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctctt 43  Q
    ||||||||||||||||||||||| ||| |||||||||||||||    
T  15318215 aactttctctctcatattcacattattatttactttatctctt 15318173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 26832693 - 26832731
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  26832693 tttctctctcatactcacatcattttttactttatctct 26832731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 868979 - 868938
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  868979 aactttctctctcatattcatattattttttactttatctct 868938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2075478 - 2075437
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  2075478 aactttctctctcatactcacattattttttactttatctct 2075437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4820295 - 4820336
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  4820295 aactttctctctcatactcacattattttttactttatctct 4820336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6531210 - 6531169
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  6531210 aactttctctctcatactcacattattttttactttatctct 6531169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 22341197 - 22341160
Alignment:
Q  5 ttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||| |||||||||||||||||||||||||    
T  22341197 ttctctctcatactcacatcattttttactttatctct 22341160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30036821 - 30036780
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  30036821 aactttctctctcataatcacataattttttactttatctct 30036780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30152557 - 30152516
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  30152557 aactttctctctcatactcacataattttttactttatctct 30152516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33421804 - 33421845
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||| ||||| |||||||||||||||||||||||||    
T  33421804 aactttctctttcatactcacatcattttttactttatctct 33421845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 11547553 - 11547515
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  11547553 tttctctctcatactcacattattttttactttatctct 11547515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32459544 - 32459502
Alignment:
Q  1 aactttctctctcatattcacatca-ttttttactttatctct 42  Q
    ||||||||||||||||||||||| | |||||||||||||||||    
T  32459544 aactttctctctcatattcacattacttttttactttatctct 32459502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 75
Target Start/End: Original strand, 335178 - 335211
Alignment:
Q  42 tttttctttgtaaattatgattgtcacataagtt 75  Q
    |||||||||||||||||||||||||| |||||||    
T  335178 tttttctttgtaaattatgattgtcaaataagtt 335211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 13143409 - 13143368
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  13143409 aactttctctctcatactcacattactttttactttatctct 13143368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14699691 - 14699650
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||| ||||||| |||||| ||||||||||||||||||    
T  14699691 aactttctttctcatactcacattattttttactttatctct 14699650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18141328 - 18141287
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  18141328 aactttctctctcatactcacattactttttactttatctct 18141287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20822895 - 20822854
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  20822895 aactttctctctcatactcacattactttttactttatctct 20822854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 32046746 - 32046783
Alignment:
Q  5 ttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  32046746 ttctctctcatactcacattattttttactttatctct 32046783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 35213588 - 35213547
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  35213588 aactttctctctcatactcacattactttttactttatctct 35213547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 5028221 - 5028181
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||| ||||||||| ||||| ||||||||||||||    
T  5028221 ctttttctttataaattatggttgtctcataagttatcaac 5028181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 6531135 - 6531095
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||||||||| ||||| ||| ||||||||||    
T  6531135 ctttttctttgtaaattatggttgtcccattagttatcaac 6531095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 35213516 - 35213476
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||||||||||||||| || ||||| |||||    
T  35213516 ctttttctttgtaaattatgattgtcccaaaagttgtcaac 35213476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000004; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4430963 - 4430922
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  4430963 aactttttctctcatactcacatcattttttactttatctct 4430922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8267847 - 8267806
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  8267847 aactttctctctcatactcacattattttttactttatctct 8267806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15267828 - 15267869
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  15267828 aactttctctctcatattcatattattttttactttatctct 15267869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18842348 - 18842307
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  18842348 aactttctctctcatactcacattattttttactttatctct 18842307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 20770175 - 20770216
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  20770175 aactttctctctcatactcacattattttttactttatctct 20770216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30640834 - 30640875
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  30640834 aactttctctctcatatttacattattttttactttatctct 30640875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 35099032 - 35098991
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  35099032 aactttctctctcatactcacattattttttactttatctct 35098991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41175733 - 41175692
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  41175733 aactttctctctcatactcacattattttttactttatctct 41175692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 3640152 - 3640108
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaactaaa 85  Q
    |||||||||| ||||||||| |||||||||||||| |||||||||    
T  3640152 ctttttctttataaattatggttgtcacataagttgtcaactaaa 3640108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 15953000 - 15952960
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  15953000 ctttttctttgtaaattatggttgtcacataagttgtcaac 15952960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 41175661 - 41175621
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  41175661 ctttttctttgtaaattatggttgtcacataagttgtcaac 41175621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 1839372 - 1839333
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatct 40  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  1839372 aactttctctctcatactcacattattttttactttatct 1839333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 3640224 - 3640185
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatct 40  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  3640224 aactttctctctcatactcacattattttttactttatct 3640185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 39628833 - 39628872
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatct 40  Q
    ||||||||||||||||||||||| |||||| |||||||||    
T  39628833 aactttctctctcatattcacattatttttaactttatct 39628872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 15478705 - 15478743
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  15478705 tttctctctcatactcacattattttttactttatctct 15478743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 189730 - 189689
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  189730 aactttctctctcatactcacattactttttactttatctct 189689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2689013 - 2688972
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||| ||||||| |||| ||||||||||||||||||    
T  2689013 aactttctctttcatatttacattattttttactttatctct 2688972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4098655 - 4098696
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||| |||||||||||||| |||| |||||||||||||||    
T  4098655 aactttatctctcatattcacgtcatattttactttatctct 4098696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 5042292 - 5042333
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||| ||||||||| |||||| ||||||||||||||||||    
T  5042292 aactttatctctcatactcacattattttttactttatctct 5042333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 6292165 - 6292206
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||| ||| |||||| ||||||||||||||||||    
T  6292165 aactttctctcttatactcacattattttttactttatctct 6292206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 6517756 - 6517797
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  6517756 aactttctctctcatactcacattactttttactttatctct 6517797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9581623 - 9581664
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||| ||||| |||||| ||||||||||||||||||    
T  9581623 aactttctctttcatactcacattattttttactttatctct 9581664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19481209 - 19481168
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  19481209 aactttctctctcatactcacattactttttactttatctct 19481168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 19840013 - 19839976
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttat 38  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  19840013 aactttctctctcatactcacattattttttactttat 19839976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 35098959 - 35098926
Alignment:
Q  42 tttttctttgtaaattatgattgtcacataagtt 75  Q
    |||||||||||||||||||||||||| |||||||    
T  35098959 tttttctttgtaaattatgattgtcaaataagtt 35098926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37700504 - 37700545
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||| ||||||||    
T  37700504 aactttctctctcatactcacattattttttaccttatctct 37700545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 43196652 - 43196611
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||| ||||||| |||||| ||||||||||||||||||    
T  43196652 aactttctttctcatactcacattattttttactttatctct 43196611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43441782 - 43441823
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  43441782 aactttctctctcatactcacattactttttactttatctct 43441823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 9226416 - 9226456
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    ||||||||||||||||||| ||||||||| ||||| |||||    
T  9226416 ctttttctttgtaaattataattgtcacaaaagttgtcaac 9226456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 10649551 - 10649591
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||||||||| |||||||| ||||| |||||    
T  10649551 ctttttctttgtaaattatggttgtcacaaaagttgtcaac 10649591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21064253 - 21064213
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctc 41  Q
    |||||||||||||||| |||||| | |||||||||||||||    
T  21064253 aactttctctctcatactcacattactttttactttatctc 21064213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000004; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8821674 - 8821715
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  8821674 aactttctctctcatactcacattattttttactttatctct 8821715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11633657 - 11633698
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||||||||||||||| | ||||||||||||||||    
T  11633657 aactttctctctcatattcacattactttttactttatctct 11633698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 26996360 - 26996401
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  26996360 aactttctctctcatactcacattattttttactttatctct 26996401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32421656 - 32421615
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| ||| |||||||||||||||||||||    
T  32421656 aactttctctctcatactcatatcattttttactttatctct 32421615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37927232 - 37927191
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  37927232 aactttctctctcatactcacataattttttactttatctct 37927191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 49761351 - 49761392
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  49761351 aactttctctctcatactcacattattttttactttatctct 49761392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 9158828 - 9158788
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  9158828 ctttttctttgtaaattatggttgtcacataagttgtcaac 9158788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 33795680 - 33795636
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaactaaa 85  Q
    |||||||||||||||||||| ||||||| |||||| |||||||||    
T  33795680 ctttttctttgtaaattatggttgtcacgtaagttgtcaactaaa 33795636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 8846538 - 8846576
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  8846538 tttctctctcatactcacattattttttactttatctct 8846576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 32767723 - 32767761
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  32767723 tttctctctcatactcacattattttttactttatctct 32767761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 33375907 - 33375945
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  33375907 tttctctctcatactcacattattttttactttatctct 33375945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 35201495 - 35201461
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagtt 75  Q
    ||||||||||||||||||||||||||| |||||||    
T  35201495 ctttttctttgtaaattatgattgtcaaataagtt 35201461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 44677508 - 44677470
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctct 42  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  44677508 tttctctctcatactcacattattttttactttatctct 44677470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 51343526 - 51343568
Alignment:
Q  43 ttttctttgtaaattatgattgtcacataagttatcaactaaa 85  Q
    ||||||||||||||||| | ||||||||||||| |||||||||    
T  51343526 ttttctttgtaaattataaatgtcacataagttgtcaactaaa 51343568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 390853 - 390894
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||| ||||||||| |||||| ||||||||||||||||||    
T  390853 aactttttctctcatactcacattattttttactttatctct 390894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10207000 - 10206959
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  10207000 aactttctctctcatactcacattactttttactttatctct 10206959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21196168 - 21196209
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| | |||| ||||||||||||||||||    
T  21196168 aactttctctctcatacttacattattttttactttatctct 21196209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 24095433 - 24095396
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttat 38  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  24095433 aactttctctctcatactcacattattttttactttat 24095396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24482990 - 24482949
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  24482990 aactttctctctcatactcacattactttttactttatctct 24482949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30909073 - 30909114
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||| |||||||||| | ||||||||||||||||    
T  30909073 aactttctctcttatattcacattactttttactttatctct 30909114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31376792 - 31376751
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||| ||||| |||||| ||||||||||||||||||    
T  31376792 aactttctctttcatactcacataattttttactttatctct 31376751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37508525 - 37508484
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  37508525 aactttctctctcatactcacattactttttactttatctct 37508484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39697249 - 39697208
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  39697249 aactttctctctcatactcacattactttttactttatctct 39697208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43905017 - 43905058
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  43905017 aactttctctctcatactcacattactttttactttatctct 43905058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 46019506 - 46019547
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  46019506 aactttctctctcatactcacattactttttactttatctct 46019547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 49363278 - 49363237
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  49363278 aactttctctctcatactcacattactttttactttatctct 49363237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 49417619 - 49417660
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| |||||||| |||||||||    
T  49417619 aactttctctctcatactcacattattttttattttatctct 49417660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 50206997 - 50206956
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  50206997 aactttctctctcatactcacattactttttactttatctct 50206956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 55400043 - 55400084
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  55400043 aactttctctctcatactcacattactttttactttatctct 55400084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 16675550 - 16675510
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatctcttt 44  Q
    |||||||||||||||||| | | ||||||||||||||||||    
T  16675550 tttctctctcatattcacgttactttttactttatctcttt 16675510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 21005131 - 21005091
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||| ||||||||||||||| || |||||||||||    
T  21005131 ctttttctttataaattatgattgtcccaaaagttatcaac 21005091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 46852087 - 46852047
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaac 81  Q
    |||||||||||||||||||||||||| || ||||| |||||    
T  46852087 ctttttctttgtaaattatgattgtcccaaaagttgtcaac 46852047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 85
Target Start/End: Original strand, 49761423 - 49761467
Alignment:
Q  41 ctttttctttgtaaattatgattgtcacataagttatcaactaaa 85  Q
    |||||||||| ||||||||||||||||  |||||| |||||||||    
T  49761423 ctttttctttataaattatgattgtcatgtaagttgtcaactaaa 49761467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 23123 - 23159
Alignment:
Q  4 tttctctctcatattcacatcattttttactttatct 40  Q
    |||||||||||||||||||| ||||||||||||||||    
T  23123 tttctctctcatattcacattattttttactttatct 23159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2241 - 2282
Alignment:
Q  1 aactttctctctcatattcacatcattttttactttatctct 42  Q
    |||||| ||||||||| |||||| ||||||||||||||||||    
T  2241 aactttatctctcatagtcacattattttttactttatctct 2282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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