View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12578_low_26 (Length: 270)

Name: NF12578_low_26
Description: NF12578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12578_low_26
NF12578_low_26
[»] chr5 (19 HSPs)
chr5 (46-270)||(4160466-4160690)
chr5 (45-270)||(40147094-40147321)
chr5 (45-270)||(38746838-38747065)
chr5 (45-270)||(27015365-27015591)
chr5 (45-270)||(5057880-5058105)
chr5 (45-270)||(213302-213525)
chr5 (45-258)||(28278161-28278376)
chr5 (45-259)||(316609-316822)
chr5 (124-264)||(16641128-16641269)
chr5 (197-256)||(33906291-33906350)
chr5 (147-260)||(14689622-14689735)
chr5 (59-244)||(35616030-35616215)
chr5 (125-266)||(27637802-27637947)
chr5 (45-233)||(10700756-10700946)
chr5 (45-99)||(39468657-39468712)
chr5 (45-98)||(13488209-13488263)
chr5 (48-90)||(22097879-22097921)
chr5 (45-90)||(3325928-3325973)
chr5 (45-90)||(13239766-13239811)
[»] chr3 (30 HSPs)
chr3 (45-270)||(46860304-46860534)
chr3 (124-270)||(34491046-34491194)
chr3 (45-270)||(30235958-30236185)
chr3 (125-270)||(6095787-6095934)
chr3 (45-270)||(4569784-4570012)
chr3 (135-270)||(40913172-40913309)
chr3 (125-269)||(36018685-36018831)
chr3 (45-270)||(49199578-49199806)
chr3 (45-270)||(54593538-54593764)
chr3 (45-270)||(5433984-5434212)
chr3 (125-270)||(55302153-55302300)
chr3 (45-245)||(26323182-26323385)
chr3 (125-270)||(41819712-41819857)
chr3 (178-270)||(43403975-43404068)
chr3 (178-270)||(43402032-43402125)
chr3 (151-262)||(1683329-1683440)
chr3 (177-259)||(34795713-34795795)
chr3 (148-259)||(47304095-47304208)
chr3 (48-259)||(20937501-20937713)
chr3 (45-99)||(5236564-5236619)
chr3 (48-255)||(35138817-35139026)
chr3 (45-229)||(39127421-39127607)
chr3 (53-99)||(45095169-45095215)
chr3 (45-90)||(7762280-7762325)
chr3 (46-83)||(25491077-25491114)
chr3 (45-192)||(31340309-31340457)
chr3 (48-84)||(8166568-8166604)
chr3 (45-85)||(24635277-24635317)
chr3 (45-85)||(29813083-29813123)
chr3 (45-85)||(51398834-51398874)
[»] chr1 (33 HSPs)
chr1 (45-270)||(11348531-11348758)
chr1 (45-270)||(37033181-37033408)
chr1 (135-264)||(34603415-34603545)
chr1 (48-268)||(41135656-41135877)
chr1 (45-270)||(29136080-29136307)
chr1 (45-270)||(37879019-37879246)
chr1 (45-270)||(13547197-13547424)
chr1 (45-269)||(47115005-47115231)
chr1 (45-270)||(42298083-42298310)
chr1 (165-264)||(34602569-34602668)
chr1 (45-266)||(6808284-6808512)
chr1 (135-266)||(193448-193581)
chr1 (64-270)||(13549127-13549335)
chr1 (135-270)||(7482430-7482565)
chr1 (45-270)||(37168130-37168357)
chr1 (125-270)||(28242221-28242368)
chr1 (125-270)||(31925895-31926041)
chr1 (45-269)||(47255448-47255673)
chr1 (140-270)||(19752518-19752650)
chr1 (151-270)||(19754324-19754448)
chr1 (147-268)||(22079158-22079278)
chr1 (45-133)||(12318631-12318719)
chr1 (179-255)||(12318725-12318801)
chr1 (45-266)||(25651922-25652146)
chr1 (199-267)||(9109665-9109733)
chr1 (45-99)||(28220334-28220389)
chr1 (52-90)||(2926523-2926561)
chr1 (48-101)||(9109531-9109584)
chr1 (45-90)||(33775924-33775969)
chr1 (45-85)||(3156885-3156925)
chr1 (151-254)||(3331403-3331505)
chr1 (64-99)||(8871175-8871211)
chr1 (45-85)||(49918370-49918410)
[»] chr6 (16 HSPs)
chr6 (45-270)||(21593499-21593724)
chr6 (45-270)||(5043460-5043687)
chr6 (45-266)||(2973047-2973270)
chr6 (45-266)||(26830231-26830455)
chr6 (135-270)||(603278-603415)
chr6 (45-270)||(17762822-17763050)
chr6 (125-270)||(3808897-3809043)
chr6 (45-214)||(25073457-25073628)
chr6 (125-266)||(22425016-22425156)
chr6 (214-270)||(17757917-17757973)
chr6 (122-265)||(5740975-5741120)
chr6 (48-90)||(186729-186771)
chr6 (53-99)||(5406316-5406362)
chr6 (53-99)||(5410641-5410687)
chr6 (53-99)||(31404791-31404837)
chr6 (211-239)||(25073048-25073076)
[»] chr4 (43 HSPs)
chr4 (45-270)||(379212-379440)
chr4 (129-270)||(33989695-33989837)
chr4 (45-266)||(12073229-12073452)
chr4 (125-270)||(50674034-50674181)
chr4 (45-270)||(55085473-55085700)
chr4 (45-266)||(54882857-54883080)
chr4 (135-267)||(41964251-41964384)
chr4 (148-270)||(26364098-26364222)
chr4 (140-269)||(35662276-35662405)
chr4 (45-270)||(8665240-8665468)
chr4 (49-258)||(32091324-32091534)
chr4 (45-269)||(46703334-46703560)
chr4 (125-270)||(6655789-6655936)
chr4 (45-241)||(2209575-2209773)
chr4 (125-270)||(50262886-50263033)
chr4 (54-250)||(41961264-41961468)
chr4 (45-262)||(12119380-12119599)
chr4 (125-270)||(8647971-8648118)
chr4 (208-270)||(40630817-40630879)
chr4 (45-195)||(40632354-40632505)
chr4 (166-237)||(33089754-33089825)
chr4 (176-268)||(3785926-3786017)
chr4 (166-270)||(34112445-34112549)
chr4 (125-270)||(26699634-26699780)
chr4 (141-245)||(27417165-27417271)
chr4 (176-259)||(22882994-22883077)
chr4 (176-259)||(22934658-22934741)
chr4 (174-268)||(35370576-35370669)
chr4 (47-156)||(44967939-44968049)
chr4 (45-161)||(6677412-6677529)
chr4 (48-92)||(34788886-34788930)
chr4 (45-99)||(9927566-9927621)
chr4 (45-99)||(26364241-26364296)
chr4 (45-99)||(34570522-34570577)
chr4 (176-259)||(35369681-35369763)
chr4 (45-99)||(54200014-54200069)
chr4 (45-83)||(33089900-33089938)
chr4 (53-90)||(27994835-27994871)
chr4 (49-90)||(44570478-44570519)
chr4 (45-90)||(48143058-48143103)
chr4 (45-90)||(56178745-56178790)
chr4 (45-85)||(5349930-5349970)
chr4 (45-85)||(52467462-52467502)
[»] chr8 (18 HSPs)
chr8 (45-270)||(44353625-44353853)
chr8 (45-270)||(11383819-11384045)
chr8 (45-269)||(42435099-42435325)
chr8 (64-266)||(40328616-40328820)
chr8 (45-270)||(4283357-4283584)
chr8 (125-270)||(40221578-40221725)
chr8 (45-258)||(18655246-18655460)
chr8 (176-268)||(40585561-40585652)
chr8 (214-267)||(9633816-9633869)
chr8 (179-259)||(33655548-33655628)
chr8 (45-85)||(4162517-4162557)
chr8 (46-105)||(29796431-29796491)
chr8 (45-99)||(15212791-15212846)
chr8 (45-91)||(11137039-11137085)
chr8 (50-91)||(41266982-41267024)
chr8 (45-90)||(12702742-12702787)
chr8 (45-90)||(42498209-42498254)
chr8 (45-133)||(32902282-32902370)
[»] chr7 (29 HSPs)
chr7 (45-270)||(2361080-2361306)
chr7 (45-270)||(34310824-34311051)
chr7 (45-267)||(48599442-48599666)
chr7 (45-266)||(6431808-6432031)
chr7 (125-270)||(4512578-4512725)
chr7 (135-270)||(2390115-2390252)
chr7 (135-270)||(6360110-6360247)
chr7 (140-270)||(29608569-29608701)
chr7 (45-270)||(4508814-4509041)
chr7 (125-270)||(4510736-4510883)
chr7 (135-270)||(3258829-3258964)
chr7 (47-259)||(1360263-1360478)
chr7 (140-267)||(22328601-22328730)
chr7 (45-270)||(22269806-22270033)
chr7 (64-270)||(8359444-8359653)
chr7 (49-92)||(43363586-43363629)
chr7 (188-258)||(43363667-43363737)
chr7 (198-263)||(5116475-5116540)
chr7 (48-145)||(5116564-5116661)
chr7 (45-90)||(23555055-23555100)
chr7 (45-99)||(4586166-4586221)
chr7 (45-99)||(27347822-27347877)
chr7 (45-99)||(48489436-48489491)
chr7 (45-99)||(48491584-48491639)
chr7 (70-163)||(3904751-3904844)
chr7 (50-91)||(26639334-26639375)
chr7 (185-245)||(22552683-22552743)
chr7 (45-85)||(43864264-43864304)
chr7 (45-85)||(47674051-47674091)
[»] chr2 (14 HSPs)
chr2 (45-270)||(1631840-1632067)
chr2 (49-270)||(35446996-35447219)
chr2 (45-270)||(45726762-45726989)
chr2 (125-270)||(42288298-42288445)
chr2 (45-265)||(17450429-17450651)
chr2 (140-270)||(24397891-24398018)
chr2 (45-102)||(42261594-42261651)
chr2 (45-267)||(33648006-33648231)
chr2 (45-90)||(6595114-6595159)
chr2 (45-128)||(30218153-30218236)
chr2 (176-259)||(43730992-43731074)
chr2 (169-259)||(30218269-30218358)
chr2 (45-90)||(41446154-41446199)
chr2 (45-90)||(41454249-41454294)
[»] scaffold0014 (1 HSPs)
scaffold0014 (45-268)||(80391-80616)
[»] scaffold0466 (1 HSPs)
scaffold0466 (45-270)||(7161-7387)
[»] scaffold0286 (1 HSPs)
scaffold0286 (53-270)||(11391-11609)
[»] scaffold0176 (1 HSPs)
scaffold0176 (45-270)||(18111-18336)
[»] scaffold0002 (1 HSPs)
scaffold0002 (45-102)||(490429-490486)
[»] scaffold0197 (1 HSPs)
scaffold0197 (208-267)||(1679-1737)


Alignment Details
Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 46 - 270
Target Start/End: Complemental strand, 4160690 - 4160466
Alignment:
Q  46 agcttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgttt 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4160690 agcttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgttt 4160591  T
Q  146 gcaattgtttctcaactctgaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccc 245  Q
     |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4160590 acaattgtttctcaactctgaatctaacccccaaaagagaaccaacccttagcctttaattacctaaggatcttctcttttggtttcccaagattcaccc 4160491  T
Q  246 tagttgctcacaaatgactctccac 270  Q
    |||||||||||||||||||||||||    
T  4160490 tagttgctcacaaatgactctccac 4160466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 40147321 - 40147094
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttc-actcaaccaatgtg 142  Q
    ||||||||||||| || | |||||||| ||||||||||||| ||||||| ||||||  |  |||| ||| ||| |||| |||||| ||||  |||| |||    
T  40147321 tagcttcaacaagctcacgaagaacaaccctaatttctacccattttcccaatctcacca-atgaacaagacactcat-gatttccactctcccaaggtg 40147224  T
Q  143 tttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagact 240  Q
    ||| |||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | |||||||||||||||||||||||| |||||||    
T  40147223 tttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagact 40147124  T
Q  241 caccctagttgctcacaaatgactctccac 270  Q
    ||||| ||||||||||||| ||||||||||    
T  40147123 cacccaagttgctcacaaaagactctccac 40147094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 38747065 - 38746838
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| ||||||||||||| ||||||| |||||| | | |||| ||| | | ||||   ||||||||  |||| ||||    
T  38747065 tagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcat-taatgaacaagatactcatgattttcactctcccaaggtgt 38746967  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacc-taaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||| ||| |  ||||||||||||||||||||||| ||||||||    
T  38746966 ttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcaataaggatcttctcttttggtttcacaagactc 38746867  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    |||| |||||||| |||||||||||||||    
T  38746866 acccaagttgctcgcaaatgactctccac 38746838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 27015591 - 27015365
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    |||||||||||||||| | |||||||| ||||||||||||| ||||||| ||||||  |  |||| |||| || ||||   ||||||||  ||||  |||    
T  27015591 tagcttcaacaagttcacaaagaacaaccctaatttctacctattttcccaatctcacca-atgaccaaa-cactcatgattttcactctcccaagatgt 27015494  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | |||||||||||||||||||||||  ||||||||    
T  27015493 ttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggttttacaagactc 27015394  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    |||| ||||||||||||| ||||||||||    
T  27015393 acccaagttgctcacaaaagactctccac 27015365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 5058105 - 5057880
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || |  ||||||| ||||||||||||| ||||||| ||||||  |  |||| ||| ||| ||||   ||||||||  |||| ||||    
T  5058105 tagcttcaacaagctcac--agaacaaccctaatttctacccattttcccaatctcacca-atgaacaagacactcatgattttcactcttccaaggtgt 5058009  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||  ||||||| |||||||||| |||||||||||||||||||| |||||| |||   |||||||||||||||||||||||| ||||||||    
T  5058008 ttacaattgttttccaactctagaatctaacccccaaaagagaaccaacccttagcctttgattttactaaggatcttctcttttggtttcacaagactc 5057909  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
     ||| ||||||||||||||||||||||||    
T  5057908 gcccaagttgctcacaaatgactctccac 5057880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 213525 - 213302
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    |||||| |||||| || | |||||||| ||||||||||||| ||||||| ||||||  |  |||| ||| ||| ||||   ||||||||  |||| ||||    
T  213525 tagctttaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcacca-atgaacaagacactcatgattttcactctcccaaggtgt 213427  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||| |||||||||||||    ||| |||||| ||| | |||||||||||||||||||||||| ||||||||    
T  213426 ttacaattgtttcccaactctagaatctaacccccaaaagagaacc----cttagcctttgatttcactaaggatcttctcttttggtttcacaagactc 213331  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    |||| ||||||||||||| ||||||||||    
T  213330 acccaagttgctcacaaaagactctccac 213302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 45 - 258
Target Start/End: Complemental strand, 28278376 - 28278161
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| | ||||||||||| ||||||| ||||||  |  |||| ||| ||| ||||   ||||||||  |||||||||    
T  28278376 tagcttcaacaagctcacaaagaacaaccataatttctacccattttcccaatctcacca-atgaacaagacactcatgattttcactctcccaatgtgt 28278278  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||| | |||||||| ||||||||| || ||| ||| | ||||  ||||||||||||| |||| ||||||||    
T  28278277 ttacaattgtttcccaactctagaatctaacccctaaaagagagccaacccttagcatttgatttcactaacaatcttctcttttgatttcacaagactc 28278178  T
Q  242 accctagttgctcacaa 258  Q
    |||| ||||||||||||    
T  28278177 acccaagttgctcacaa 28278161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 259
Target Start/End: Complemental strand, 316822 - 316609
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgtt 144  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||  |||||  || | | | ||| | |  || |||||||||||| || |  | ||    
T  316822 tagcttcaacaagctctccaagaacaaacctaatttctacctttttctcaatcttttcccctaaacaagagacccaatgatttcactcacccgagttttt 316723  T
Q  145 tgcaattgtttctcaactctgaa-tctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcac 243  Q
      |||||||||  ||||| | || ||||||| |||||||||||||||||||| |||||| ||| ||| ||||| |||||||||||| |||||||| |||     
T  316722 cccaattgttttccaactttaaaatctaacccccaaaagagaaccaacccttagcctttgatttcct-aggattttctcttttggtctcccaagattca- 316625  T
Q  244 cctagttgctcacaaa 259  Q
    || |||||||||||||    
T  316624 ccaagttgctcacaaa 316609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 264
Target Start/End: Original strand, 16641128 - 16641269
Alignment:
Q  124 atttcactcaaccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctc 222  Q
    ||||||||||  ||| |||||| ||| |||| | ||||||| |||||||| | ||||||||||||||||| || |||||| |||   |||| ||||||||    
T  16641128 atttcactcactcaaggtgtttacaaatgttccccaactctagaatctaatccccaaaagagaaccaacctttagcctttgattttttaagtatcttctc 16641227  T
Q  223 ttttggtttcccaagactcaccctagttgctcacaaatgact 264  Q
    |||||||||| |||||||||||  ||||| |||||| |||||    
T  16641228 ttttggtttcacaagactcaccaaagttgttcacaattgact 16641269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 256
Target Start/End: Original strand, 33906291 - 33906350
Alignment:
Q  197 gcctttaattacctaaggatcttctcttttggtttcccaagactcaccctagttgctcac 256  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33906291 gcctttgatttcctaaggatcttctcttttggtttcccaagactcacccaagttgctcac 33906350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 147 - 260
Target Start/End: Original strand, 14689622 - 14689735
Alignment:
Q  147 caattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccc 245  Q
    |||||||||| ||||||| ||||||| || |||||||||||||||||| | |||||| |||  ||||||||||| ||||||||| |||||||||| | |     
T  14689622 caattgtttcacaactctagaatctatcc-ccaaaagagaaccaacccctagcctttgattttctaaggatcttttcttttggtgtcccaagacttatct 14689720  T
Q  246 tagttgctcacaaat 260  Q
     ||||||||||||||    
T  14689721 aagttgctcacaaat 14689735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 244
Target Start/End: Complemental strand, 35616215 - 35616030
Alignment:
Q  59 tctccaagaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgtttgc-aattgtttct 157  Q
    ||||||||||||||||||||||||||   ||||  |||||| || | ||| ||| | | ||| |||||||||||| |||| |||||| | |||||||||     
T  35616215 tctccaagaacaaacctaatttctactcatttctcaatctcttcccgtgaacaagagactcaatgatttcactcacccaaggtgtttcctaattgtttcc 35616116  T
Q  158 caactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcacc 244  Q
     |||||| |||||||||| | ||||||||| |||| || | ||||| ||| | | | ||||||| |||||||||||||||||||||||    
T  35616115 aaactctagaatctaaccac-aaaagagaatcaactctag-cctttgatttcttgatgatcttcgcttttggtttcccaagactcacc 35616030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 266
Target Start/End: Original strand, 27637802 - 27637947
Alignment:
Q  125 tttcactcaaccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctc 222  Q
    ||||||||  |||| |||||  |||||||||| ||||||| | |||||||| |||||||||||| |||  || | |||| ||| | ||||||||||||||    
T  27637802 tttcactcttccaaggtgttcacaattgtttcccaactctagcatctaacccccaaaagagaacaaacttttagtctttgatttcactaaggatcttctc 27637901  T
Q  223 --ttttggtttcccaagactcaccctagttgctcacaaatgactct 266  Q
      |||||||||| |||||||||||| ||||||||| ||| ||||||    
T  27637902 tcttttggtttcacaagactcacccaagttgctcataaaagactct 27637947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 233
Target Start/End: Original strand, 10700756 - 10700946
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattga-tttcactcaaccaatgtgt 143  Q
    ||||||||||||| |||| |||||||||||||||||||||| |||| | |||||  | |||||| ||||| | ||| ||| |||||| || |||| ||||    
T  10700756 tagcttcaacaagctctctaagaacaaacctaatttctaccttttttccaatctattttcatgaacaaaatactcaatgattttcacgcacccaaggtgt 10700855  T
Q  144 ttgc-aattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcc 233  Q
    || | ||||||||| ||  | | ||||||| || |||||||   ||||| |||| |||||| ||| ||| ||||||||| | ||||||||||    
T  10700856 ttcctaattgtttcccatttttagaatctagcccccaaaag-tcaccaaaccttagccttttatttcctgaggatcttcacgtttggtttcc 10700946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 39468657 - 39468712
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttcta-ccattttccaaatctc 99  Q
    |||||||||||||||| | |||||||| ||||||||||| ||||||||| ||||||    
T  39468657 tagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctc 39468712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 13488263 - 13488209
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttcta-ccattttccaaatct 98  Q
    |||||||||||||||| | |||||||| ||||||||||| ||||||||| |||||    
T  13488263 tagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatct 13488209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 22097921 - 22097879
Alignment:
Q  48 cttcaacaagttctccaagaacaaacctaatttctaccatttt 90  Q
    ||||||||| |||||||||||||| ||||||||||||| ||||    
T  22097921 cttcaacaaattctccaagaacaaccctaatttctaccctttt 22097879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 3325973 - 3325928
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccatttt 90  Q
    ||||||||||||| ||| |||||||||| |||||||||||| ||||    
T  3325973 tagcttcaacaagctcttcaagaacaaaactaatttctaccttttt 3325928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 13239811 - 13239766
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccatttt 90  Q
    |||||||||||||||| | ||||| || ||||||||||||||||||    
T  13239811 tagcttcaacaagttcacaaagaaaaaccctaatttctaccatttt 13239766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 46860534 - 46860304
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattga--tttcactcaaccaatgt 141  Q
    ||||||||||||| || | |||||||||||||||||||||| ||||||  ||||||  |  |||| ||| ||| |||||||  ||||||||  |||| ||    
T  46860534 tagcttcaacaagctcacaaagaacaaacctaatttctacccattttctcaatctcacca-atgaacaagacactcattgaattttcactctcccaaggt 46860436  T
Q  142 gtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaaccct--tggcctttaattacctaaggatcttctcttttggtttcccaaga 238  Q
    |||| |||||||||||||||||| |||||||||| |||||||||||||||||||  | | |||| ||| ||||||||||||||||||||||||| |||||    
T  46860435 gtttacaattgtttctcaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaaga 46860336  T
Q  239 ctcaccctagttgctcacaaatgactctccac 270  Q
    ||||||| ||||||||||||||||||||||||    
T  46860335 ctcacccaagttgctcacaaatgactctccac 46860304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 124 - 270
Target Start/End: Complemental strand, 34491194 - 34491046
Alignment:
Q  124 atttcactcaaccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttct 221  Q
    |||||||||  |||| |||||| |||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | |||||||||||||    
T  34491194 atttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttct 34491095  T
Q  222 cttttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  34491094 cttttggtttcacaagactcacccaagttgctcacaaatgactctccac 34491046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 30236185 - 30235958
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| ||||||||||||| ||||||| |||||| ||  |||| ||| ||| ||||   |||||||   |||| ||||    
T  30236185 tagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcatca-atgaacaagacactcatgattttcactatcccaaggtgt 30236087  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||| ||||||||||||||| | || |||||  ||| | |||||||||||||||||||||||| ||||||||    
T  30236086 ttacaattgtttcccaactctagaatctaacccccaaaagagaaccaatcattagccttcgatttcactaaggatcttctcttttggtttcacaagactc 30235987  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    |||| | ||||||||||||||||||||||    
T  30235986 acccaacttgctcacaaatgactctccac 30235958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 6095787 - 6095934
Alignment:
Q  125 tttcactcaaccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctc 222  Q
    ||||||||  |||| |||||| |||||||||| ||||||| |||||||||| ||||||||||||||||| || || ||| ||| | ||||||||||||||    
T  6095787 tttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacctttagcatttgatttcactaaggatcttctc 6095886  T
Q  223 ttttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  6095887 ttttggtttcacaagactcacccaagttgctcacaaatgactctccac 6095934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 4570012 - 4569784
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgattt-cactcaaccaatgtg 142  Q
    ||||||||| ||| || | | |||||| ||||||||||||| ||||||| ||||||  |  | || ||||||| ||| |||||| |||||| |||| |||    
T  4570012 tagcttcaataagctcacaatgaacaaccctaatttctacccattttcccaatctcaccaaa-gaacaaaacactcaatgattttcactcacccaaggtg 4569914  T
Q  143 tttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagact 240  Q
    ||| |||||||||  ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | |||| |||| |||||||||||||| |||||||    
T  4569913 tttacaattgttttccaactctagaatctaaccaccaaaagagaaccaacccttagcctttgatttcactaaagatcatctcttttggtttcacaagact 4569814  T
Q  241 caccctagttgctcacaaatgactctccac 270  Q
    ||||| ||||||||||||| ||||||||||    
T  4569813 cacccaagttgctcacaaaagactctccac 4569784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 135 - 270
Target Start/End: Complemental strand, 40913309 - 40913172
Alignment:
Q  135 ccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttc 232  Q
    |||| |||||| |||||||||| ||||||| |||||||||| ||||||||||||||||||||  ||||||||| | ||||||||||||||||||| ||||    
T  40913309 ccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttaacctttaatttcactaaggatcttctcttttgctttc 40913210  T
Q  233 ccaagactcaccctagttgctcacaaatgactctccac 270  Q
     |||||||||||| | ||||||||||||||||||||||    
T  40913209 acaagactcacccaatttgctcacaaatgactctccac 40913172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 125 - 269
Target Start/End: Complemental strand, 36018831 - 36018685
Alignment:
Q  125 tttcactcaaccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctc 222  Q
    ||||||||  |||| |||||| |||||||||| ||||||| |||||||| | ||||||||||||||| || | |||||| ||| | ||||||||||||||    
T  36018831 tttcactctcccaaggtgtttacaattgtttcccaactctagaatctaaaccccaaaagagaaccaatccatagcctttgatttcactaaggatcttctc 36018732  T
Q  223 ttttggtttcccaagactcaccctagttgctcacaaatgactctcca 269  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||    
T  36018731 ttttggtttcacaagactcacccaagttgctcacaaatgactctcca 36018685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 45 - 270
Target Start/End: Original strand, 49199578 - 49199806
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| | ||||||||||| ||||||| ||||||  |  | || ||| ||| ||||   ||||||||  |||| ||||    
T  49199578 tagcttcaacaagctcacaaagaacaaccttaatttctacccattttcccaatctcacca-acgaacaagacactcatgattttcactctcccaaagtgt 49199676  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||| ||||||||||||||||| || |||||| ||| | |||||||||||||||||||||||| ||||||||    
T  49199677 ttacaattgtttcccaactctagaatctaacccccaaaagagaaccaaccattagcctttgatttcactaaggatcttctcttttggtttcacaagactc 49199776  T
Q  242 -accctagttgctcacaaatgactctccac 270  Q
     |||| ||||||||||||| ||||||||||    
T  49199777 aacccaagttgctcacaaaagactctccac 49199806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 54593764 - 54593538
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctac-cattttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| |||||||||| | |||||||| ||||||  |  |||| ||| ||| ||||   ||||||||  |||| ||||    
T  54593764 tagcttcaacaagctcacaaagaacaaccctaatttctgcacattttcccaatctcacca-atgaacaagacactcatgattttcactctcccaaggtgt 54593666  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||| |||||||||||| ||||||| |||||| ||| | ||||||||||||| |||||||||| ||||||||    
T  54593665 ttacaattgtttcccaactctagaatctaacccccaaaagagaac-aacccttagcctttgatttcactaaggatcttctattttggtttcacaagactc 54593567  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    || | ||||||||||||| ||||||||||    
T  54593566 actcaagttgctcacaaaagactctccac 54593538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 45 - 270
Target Start/End: Original strand, 5433984 - 5434212
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacc-taatttctaccattttc--caaatctcctctcatgagcaaaacattcattgattt-cactcaaccaatg 140  Q
    |||||| |||||| || | ||||||||||| |||||||||||||||||  | ||||||  |  |||| ||| ||| ||| |||||| |||||| |||| |    
T  5433984 tagctttaacaagctcacaaagaacaaaccctaatttctaccattttctcccaatctcacca-atgaacaagacactcaatgattttcactca-ccaagg 5434081  T
Q  141 tgtttgcaattgtttctcaactctg-aatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagac 239  Q
    ||||| |||||||||| |||||||  ||||||||| ||||||||||| ||| | || | |||| ||||| ||||||||||||||||||||||||||||||    
T  5434082 tgtttacaattgtttcccaactctataatctaacccccaaaagagaatcaatctttagtctttgattacataaggatcttctcttttggtttcccaagac 5434181  T
Q  240 tcaccctagttgctcacaaatgactctccac 270  Q
    |||||| | ||||||||||| ||||||||||    
T  5434182 tcacccaacttgctcacaaaagactctccac 5434212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 55302153 - 55302300
Alignment:
Q  125 tttcactcaaccaatgtgtttgcaattgtttctcaactctg-aatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctc 222  Q
    ||||||||  |||| || ||| |||||||||| |||||||  |||||||||| ||||||||||||||||| | |||||| ||| | ||||||||||||||    
T  55302153 tttcactctcccaaggtatttacaattgtttcccaactctataatctaacctacaaaagagaaccaacccctagcctttgatttcactaaggatcttctc 55302252  T
Q  223 ttttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    |||||||||| |||||||||| | ||||||||||||| || |||||||    
T  55302253 ttttggtttcacaagactcactcaagttgctcacaaaagaatctccac 55302300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 245
Target Start/End: Original strand, 26323182 - 26323385
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgat-ttcactcaaccaatgtgt 143  Q
    ||||||||||||  ||| ||| |||||||||||||| |||| |||||  |||||| || ||||| ||| ||| | | |||| ||||||||  ||| ||||    
T  26323182 tagcttcaacaaactcttcaaaaacaaacctaatttttacccttttctcaatctcatcccatgaacaagacacttaatgatgttcactcactcaaggtgt 26323281  T
Q  144 ttgc-aattgtttctcaactctgaa-tctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactc 241  Q
    || | ||||||||| ||||||| || |||||||  ||||||||||||||||||| || ||| ||| ||||||||| |||| ||||||| |||||||||||    
T  26323282 ttcccaattgtttcccaactctaaaatctaaccctcaaaagagaaccaacccttagcttttgatttcctaaggatattcttttttggtctcccaagactc 26323381  T
Q  242 accc 245  Q
    ||||    
T  26323382 accc 26323385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 41819712 - 41819857
Alignment:
Q  125 tttcactcaaccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctct 223  Q
    ||||||||  |||| |||||| ||||| |||| ||||||| |||||||||| | |||||||||||||||||| || ||| ||| | ||| ||||||||||    
T  41819712 tttcactctcccaaggtgtttacaattatttcccaactctagaatctaaccgctaaaagagaaccaacccttagc-tttgatttcataaagatcttctct 41819810  T
Q  224 tttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    |||||||||  ||||||||| | |||||||||||||||| |||||||    
T  41819811 tttggtttcataagactcactcaagttgctcacaaatgagtctccac 41819857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 178 - 270
Target Start/End: Original strand, 43403975 - 43404068
Alignment:
Q  178 aaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    |||||||||||||||| | |||||| ||| | |||||||||||||||||| ||||| |||||||||||| |||||||| |||||||||||||||    
T  43403975 aaaagagaaccaacccatagcctttgatttcactaaggatcttctcttttagtttcacaagactcacccaagttgctcccaaatgactctccac 43404068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 270
Target Start/End: Original strand, 43402032 - 43402125
Alignment:
Q  178 aaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    |||||||||||||||| | |||||| ||| | |||||||||||||||||||||||| ||||||| |||| ||||| |||||||||| |||||||    
T  43402032 aaaagagaaccaacccatagcctttgatttcactaaggatcttctcttttggtttcacaagacttacccaagttgttcacaaatgattctccac 43402125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 262
Target Start/End: Complemental strand, 1683440 - 1683329
Alignment:
Q  151 tgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccctagt 249  Q
    |||||| ||||||| || ||||||| |||||||| ||||||||||| |||||| |||  ||||||||||||||||||||| || |||||||||||  |||    
T  1683440 tgtttcccaactctagattctaacc-ccaaaagataaccaacccttagcctttgattttctaaggatcttctcttttggtctcacaagactcaccaaagt 1683342  T
Q  250 tgctcacaaatga 262  Q
    |||||| ||||||    
T  1683341 tgctcataaatga 1683329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 177 - 259
Target Start/End: Complemental strand, 34795795 - 34795713
Alignment:
Q  177 caaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaa 259  Q
    ||||||||||||| ||||| |||||| |||  ||||||||||||||||||||| ||||||||||||||| |||| || |||||    
T  34795795 caaaagagaaccatcccttagcctttgattttctaaggatcttctcttttggtctcccaagactcacccaagtttcttacaaa 34795713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 47304208 - 47304095
Alignment:
Q  148 aattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactcaccc 245  Q
    ||||||||  ||||||| |||||||||| |||||||||||||||||||| |  ||| ||| | |||||||| ||||||||||||||  |||||||||||     
T  47304208 aattgttttccaactctagaatctaacccccaaaagagaaccaacccttagtttttgatttcactaaggatattctcttttggttttacaagactcacct 47304109  T
Q  246 tagttgctcacaaa 259  Q
     |||||||||||||    
T  47304108 aagttgctcacaaa 47304095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 259
Target Start/End: Complemental strand, 20937713 - 20937501
Alignment:
Q  48 cttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgtttg 146  Q
    |||||||||| ||||||| ||||||| ||||||||||| ||||||| | |||| |   |||| ||| | | ||| ||||| |||||| | ||  |||||     
T  20937713 cttcaacaagctctccaaaaacaaacataatttctacctattttccga-tctctttctatgaacaagagactcaatgattgcactcatctaagctgtttt 20937615  T
Q  147 c-aattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcacc 244  Q
    | |||| |||||||||||| |||||||  | ||||||||||||||||| ||  ||||| ||| |||||| ||||||||||||||| |||||||| |||||    
T  20937614 ccaattatttctcaactctagaatctactc-ccaaaagagaaccaacctttatcctttgatttcctaagaatcttctcttttggtctcccaagaatcacc 20937516  T
Q  245 ctagttgctcacaaa 259  Q
    | ||||  |||||||    
T  20937515 caagtttgtcacaaa 20937501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 5236564 - 5236619
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttcta-ccattttccaaatctc 99  Q
    |||||||||||||||| | |||||||| ||||||||||| ||||||||| ||||||    
T  5236564 tagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctc 5236619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 255
Target Start/End: Original strand, 35138817 - 35139026
Alignment:
Q  48 cttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgattt-cactcaaccaatgtgtttg 146  Q
    |||||||||  || |||||||||||| |||||||||||  ||||  |||||| |  ||||| ||| ||| ||| |||||| |||||  |||| ||||||     
T  35138817 cttcaacaaactcaccaagaacaaacataatttctacccatttctcaatctctttccatgaacaagacactcaatgattttcactctcccaaggtgtttc 35138916  T
Q  147 -caattgtttctcaactctgaa-tctaacctccaaaagagaaccaacccttggccttta-attacctaaggatcttctcttttggtttcccaagactcac 243  Q
     |||||||||| ||||| | || | ||||| |||||||||||  ||||||| || |||  ||| |||||||||||||| ||||||| ||||||||||||     
T  35138917 acaattgtttc-caactttaaaatttaacc-ccaaaagagaattaacccttagcttttttatttcctaaggatcttctattttggtctcccaagactcat 35139014  T
Q  244 cctagttgctca 255  Q
     | |||||||||    
T  35139015 tcaagttgctca 35139026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 229
Target Start/End: Complemental strand, 39127607 - 39127421
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgattt-cactcaaccaatgtgt 143  Q
    ||||||||||||| || |||||||||||| |||||| |||   ||||  |||||| ||||||||  || ||  ||| |||||| |||||  |||| || |    
T  39127607 tagcttcaacaagctcaccaagaacaaacataatttatacttatttctcaatctcttctcatgaataagacgctcaatgattttcactcttccaaggtat 39127508  T
Q  144 ttgc-aattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggt 229  Q
    || | |||||||||  |||||| |||| ||||| | |||||||||| ||||||| |||||| ||| ||||||| | ||||||||||||    
T  39127507 tttccaattgtttccaaactctagaatttaaccac-aaaagagaactaacccttagcctttgatttcctaagggtattctcttttggt 39127421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 45095215 - 45095169
Alignment:
Q  53 acaagttctccaagaacaaacctaatttctaccattttccaaatctc 99  Q
    |||||||| | |||||||| |||||||||||||||||||| ||||||    
T  45095215 acaagttcacaaagaacaaccctaatttctaccattttcccaatctc 45095169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 7762325 - 7762280
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccatttt 90  Q
    |||||||||||||||| | |||||||| ||||||||||||| ||||    
T  7762325 tagcttcaacaagttcacaaagaacaaccctaatttctaccctttt 7762280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 83
Target Start/End: Original strand, 25491077 - 25491114
Alignment:
Q  46 agcttcaacaagttctccaagaacaaacctaatttcta 83  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  25491077 agcttcaacaagctctcaaagaacaaacctaatttcta 25491114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 192
Target Start/End: Original strand, 31340309 - 31340457
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| |  |||||||||| ||||||| ||||| | |  |||| ||||||| ||||   ||||||||  |||| ||||    
T  31340309 tagcttcaacaagctcacaaagaacaacctcaatttctaccaattttcccaatct-caccaatgaacaaaacactcatgattttcactctcccaaggtgt 31340407  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacc 192  Q
    || |||||||||| ||||||| |||||||||| | ||||| | |||||||    
T  31340408 ttacaattgtttcccaactctagaatctaacccctaaaagggcaccaacc 31340457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 8166568 - 8166604
Alignment:
Q  48 cttcaacaagttctccaagaacaaacctaatttctac 84  Q
    |||||||||  ||||||||||||||||||||||||||    
T  8166568 cttcaacaaactctccaagaacaaacctaatttctac 8166604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 24635317 - 24635277
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc 85  Q
    ||||||||||||  ||||||||||||||| |||||||||||    
T  24635317 tagcttcaacaaactctccaagaacaaacttaatttctacc 24635277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 29813123 - 29813083
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc 85  Q
    |||||||||||||||| | |||||||| |||||||||||||    
T  29813123 tagcttcaacaagttcacaaagaacaaccctaatttctacc 29813083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 51398874 - 51398834
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc 85  Q
    |||||||||||||||| | |||||||| |||||||||||||    
T  51398874 tagcttcaacaagttcactaagaacaaccctaatttctacc 51398834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 11348758 - 11348531
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacca-ttttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| |||||||||||||| |||||| ||||||  |  |||| ||| ||| ||||   ||||||||  |||| ||||    
T  11348758 tagcttcaacaagctcacaaagaacaaccctaatttctaccaattttcccaatctcacca-atgaacaagacactcatgattttcactctcccaaggtgt 11348660  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | |||||||||||||||||||||||| ||||||||    
T  11348659 ttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactc 11348560  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    |||| ||||||||||||||||||||||||    
T  11348559 acccaagttgctcacaaatgactctccac 11348531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 45 - 270
Target Start/End: Original strand, 37033181 - 37033408
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| ||||||||||||| ||||||| ||||||  |  |||| ||| ||| ||||   ||||||||  |||| ||||    
T  37033181 tagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcacca-atgaacaagacactcatgattttcactctcccaaggtgt 37033279  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||| | |||||||||||||||| | |||||| ||| | |||||||||||||||||||||||| ||||||||    
T  37033280 ttacaattgtttcccaactctagaatctaaccccaaaaagagaaccaacccatagcctttgatttcactaaggatcttctcttttggtttcacaagactc 37033379  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    |||| ||||||||||||||||||||||||    
T  37033380 acccaagttgctcacaaatgactctccac 37033408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 135 - 264
Target Start/End: Complemental strand, 34603545 - 34603415
Alignment:
Q  135 ccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcc 233  Q
    |||| |||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||     
T  34603545 ccaaggtgtttacaattgtttcccaactctagaatctaacctccaaaagagaaccaacccttagcctttgatttcctaaggatcttctcttttggtttca 34603446  T
Q  234 caagactcaccctagttgctcacaaatgact 264  Q
    |||||||||||| ||||||||||||| ||||    
T  34603445 caagactcacccaagttgctcacaaaagact 34603415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 48 - 268
Target Start/End: Complemental strand, 41135877 - 41135656
Alignment:
Q  48 cttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgtttg- 146  Q
    |||||| ||||||| |||||||||| |||||||||||| |||| | | ||||||| || || ||| | | ||| ||||||| |||| |||| ||||||      
T  41135877 cttcaaaaagttcttcaagaacaaatctaatttctaccctttttctattctcctcacaggaacaagagactcaatgatttccctcacccaaggtgttttt 41135778  T
Q  147 caattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccc 245  Q
    ||| |||||||||||||| |||||||||| ||||||||||||||| |||| |||||||||| || || |||||||||||||||||||| |||||||||||    
T  41135777 caaatgtttctcaactctagaatctaacccccaaaagagaaccaatccttagcctttaatttccaaatgatcttctcttttggtttcctaagactcaccc 41135678  T
Q  246 tagttgctcacaaatgactctcc 268  Q
     |||| |||||||| ||||||||    
T  41135677 aagtttctcacaaa-gactctcc 41135656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 29136307 - 29136080
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| ||||||||||||| ||||||| ||||||  |  |||| ||| ||| ||||   ||||||||  |||| ||||    
T  29136307 tagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcacca-atgaacaagacactcatgattttcactctcccaaggtgt 29136209  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||| |||||||||||| ||||||| |||||| ||| | |||||||||||||||||||||||| ||||||||    
T  29136208 ttacaattgtttcacaactctagaatctaacccccaaaagagaactaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactc 29136109  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    |||| |||||||||||||  |||||||||    
T  29136108 acccaagttgctcacaaaaaactctccac 29136080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 270
Target Start/End: Original strand, 37879019 - 37879246
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| ||||||||||||| ||||||| ||||||  |  |||| ||| ||| ||||   ||||||||  |||| ||||    
T  37879019 tagcttcaacaagctcacaaagaacaaccctaatttctacctattttcccaatctcacca-atgaacaagacactcatgattttcactctcccaaggtgt 37879117  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||| ||||||||||||||| |||| |||||| ||| | ||||||||||||||||||| |||| ||||||||    
T  37879118 ttacaattgtttcccaactctagaatctaacccccaaaagagaaccaatccttagcctttgatttcactaaggatcttctcttttgatttcacaagactc 37879217  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    |||| ||||||||||||| ||||||||||    
T  37879218 acccaagttgctcacaaaagactctccac 37879246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 270
Target Start/End: Original strand, 13547197 - 13547424
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| ||||||||||||| ||||||| ||||||  |  |||| ||| ||| ||||   ||||||||  |||| ||||    
T  13547197 tagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcacca-atgaacaagacactcatgattttcactctcccaaggtgt 13547295  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||| ||| |||||||||| |||||||||||||||||||| |||||| ||| | ||||| |||||||||||||||||| ||||| ||    
T  13547296 ttacaattgtttcccaaatctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagtatcttctcttttggtttcacaagattc 13547395  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    |||| ||||||||||||| ||||||||||    
T  13547396 acccaagttgctcacaaaagactctccac 13547424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 45 - 269
Target Start/End: Complemental strand, 47115231 - 47115005
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacca-ttttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    |||||| |||||| || | |||||||| |||||||||||||| |||||| ||||||  |  |||| ||| ||| ||||   ||||||||  ||||  |||    
T  47115231 tagcttaaacaagctcacaaagaacaaccctaatttctaccaattttcccaatctcacca-atgaacaagacactcatgattttcactctcccaagatgt 47115133  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacct-aaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | | |||||||||||||||||||||| ||||||||    
T  47115132 ttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcattaaggatcttctcttttggtttcacaagactc 47115033  T
Q  242 accctagttgctcacaaatgactctcca 269  Q
    |||| ||||||||||||| |||||||||    
T  47115032 acccaagttgctcacaaaagactctcca 47115005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 45 - 270
Target Start/End: Original strand, 42298083 - 42298310
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacca-ttttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | || ||||| |||||||||||||| |||||| ||||||  |  |||| ||| ||| ||||   ||| ||||  |||| ||||    
T  42298083 tagcttcaacaagctcacaaaaaacaaccctaatttctaccaattttcccaatctcacca-atgaacaagacactcatgatttttactctcccaaggtgt 42298181  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||| |||||||||||||||| ||| |||||| ||| | || ||||||||||||||||||||| ||||||||    
T  42298182 ttacaattgtttcacaactctagaatctaacccccaaaagagaaccaactcttagcctttgatttcacttaggatcttctcttttggtttcacaagactc 42298281  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    |||| |||||||| |||||||||||||||    
T  42298282 acccaagttgctcgcaaatgactctccac 42298310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 165 - 264
Target Start/End: Original strand, 34602569 - 34602668
Alignment:
Q  165 gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaatgact 264  Q
    ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||    
T  34602569 gaatctaacctccaaaagagaaccaacccttagcctttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagact 34602668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 45 - 266
Target Start/End: Complemental strand, 6808512 - 6808284
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaat------ttctaccattttccaaatctcctctcatgagcaaaacattcattgattt-cactcaacca 137  Q
    ||||||||||||| ||||||||||||||||||||      ||||||||||| || ||||||  ||||||| ||| ||| ||| | |||| |||||  |||    
T  6808512 tagcttcaacaagctctccaagaacaaacctaatcctaatttctaccatttccctaatctctactcatgaacaagacactcaataattttcactctccca 6808413  T
Q  138 atgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaa 236  Q
    | |||||| | | |||||||||||||| |||||||||||| ||| ||||||||||| |  | |||| ||||| ||| |||||||||||||||||| |||     
T  6808412 aagtgtttcccaatgtttctcaactctagaatctaacctcgaaa-gagaaccaaccttccgtctttgattacataatgatcttctcttttggttttccat 6808314  T
Q  237 gactcaccctagttgctcacaaatgactct 266  Q
     |||||||||||||||||||||||||||||    
T  6808313 tactcaccctagttgctcacaaatgactct 6808284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 193581 - 193448
Alignment:
Q  135 ccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttc 232  Q
    |||| |||||| |||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | ||||||||||||||||||||||||    
T  193581 ccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttc 193482  T
Q  233 ccaagactcaccctagttgctcacaaatgactct 266  Q
     ||||||||| || ||||||||||||| ||||||    
T  193481 acaagactcatccaagttgctcacaaaagactct 193448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 64 - 270
Target Start/End: Original strand, 13549127 - 13549335
Alignment:
Q  64 aagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgtttgcaattgtttctcaact 162  Q
    |||||||| ||||||||||||| ||||||| ||||||  |  |||| ||| ||| ||||   ||||||||  |||| |||||| |||||||||| ||| |    
T  13549127 aagaacaaccctaatttctacccattttcccaatctcacca-atgaacaagacactcatgattttcactctcccaaggtgtttacaattgtttcccaaat 13549225  T
Q  163 ct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaat 260  Q
    || |||||||||| |||||||||||||||||||| |||||| ||| | ||||| |||||||||||||||||| ||||| |||||| |||||||||||||     
T  13549226 ctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagtatcttctcttttggtttcacaagattcacccaagttgctcacaaaa 13549325  T
Q  261 gactctccac 270  Q
    ||||||||||    
T  13549326 gactctccac 13549335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 135 - 270
Target Start/End: Original strand, 7482430 - 7482565
Alignment:
Q  135 ccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcc 233  Q
    |||| |||||| |||||| ||| ||||||| |||||||||| |||||||||||||||||||| || ||| ||| ||||||||||||||||||| |||||     
T  7482430 ccaaggtgtttacaattgcttcccaactctagaatctaacccccaaaagagaaccaacccttagc-tttgatttcctaaggatcttctctttttgtttca 7482528  T
Q  234 caagactcaccctagttgctcacaaatgactctccac 270  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  7482529 caagactcacccaagttgctcacaaaagactctccac 7482565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 37168357 - 37168130
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    |||||| |||||| || | |||||||| ||||||||||||| ||||||| ||||||  |  |||| ||| ||| ||||   ||||||||   ||| ||||    
T  37168357 tagcttaaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcacca-atgaacaagacactcatgattttcactctctcaaggtgt 37168259  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||| ||||||||||| ||||| || |||||| ||| | |||||||||||||||||| ||||| ||||||||    
T  37168258 ttacaattgtttcccaactctagaatctaacccccaaaagagaatcaacctttagcctttgatttcactaaggatcttctcttttagtttcacaagactc 37168159  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    |||| ||||||||||||| ||||||||||    
T  37168158 acccaagttgctcacaaaagactctccac 37168130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 28242368 - 28242221
Alignment:
Q  125 tttcactcaaccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctc 222  Q
    ||||||||  |||| |||||| |||||||||  ||||||| |||||||||| | |||||||||||||||| | |||||| ||| | |||||||| |||||    
T  28242368 tttcactctcccaaggtgtttacaattgttttccaactctagaatctaacccctaaaagagaaccaacccatagcctttgatttcactaaggatattctc 28242269  T
Q  223 ttttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  28242268 ttttggtttcacaagactcacccaagttgctcacaaatgactctccac 28242221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 31925895 - 31926041
Alignment:
Q  125 tttcactcaaccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctc 222  Q
    ||||||||  |||| |||||| ||| || ||| ||||||| |||||||||| ||||||||||||||||| || |||||| ||| | ||||||||||||||    
T  31925895 tttcactctcccaaggtgtttacaactgcttc-caactctagaatctaacccccaaaagagaaccaaccattagcctttgatttcactaaggatcttctc 31925993  T
Q  223 ttttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    |||||||||| |||| ||||||| ||||||||||||| || |||||||    
T  31925994 ttttggtttcacaagtctcacccaagttgctcacaaaagattctccac 31926041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 269
Target Start/End: Original strand, 47255448 - 47255673
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| ||||||||||||| ||||| | ||||||  |  |||| ||| ||| ||||   ||||||||  |||| |  |    
T  47255448 tagcttcaacaagctcacaaagaacaaccctaatttctacccatttttccaatctcacca-atgaacaagacactcatgattttcactctcccaaggcat 47255546  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || ||||| |||| ||||||| |||||||||| |||||||||||||||||||| | |||| ||| | |||||||||||||||||||||||| ||||||||    
T  47255547 ttacaattatttcccaactctagaatctaacccccaaaagagaaccaacccttagtctttgatttcactaaggatcttctcttttggtttcacaagactc 47255646  T
Q  242 accctagttgctcacaaatgactctcca 269  Q
    | |  ||||||||||||| |||||||||    
T  47255647 a-ctaagttgctcacaaaagactctcca 47255673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 270
Target Start/End: Complemental strand, 19752650 - 19752518
Alignment:
Q  140 gtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaag 237  Q
    |||||| | ||| |||| ||||||| |||||||||| ||||||||||||||| | || |||||| ||| | |||||||||||||||||||||||| ||||    
T  19752650 gtgtttacgattatttcccaactctagaatctaacccccaaaagagaaccaatcattagcctttgatttcactaaggatcttctcttttggtttcacaag 19752551  T
Q  238 actcaccctagttgctcacaaatgactctccac 270  Q
    ||||| |  |||||||||||||  |||||||||    
T  19752550 actcatctaagttgctcacaaaatactctccac 19752518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 151 - 270
Target Start/End: Complemental strand, 19754448 - 19754324
Alignment:
Q  151 tgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacc----taaggatcttctcttttggtttcccaagactcaccc 245  Q
    |||||| ||||||| |||||||||| ||||||||||||||||| ||  ||||| ||| |     ||||||| ||||||||||||||| ||||||||||||    
T  19754448 tgtttcccaactctagaatctaacccccaaaagagaaccaaccattatcctttgatttcacttataaggattttctcttttggtttcacaagactcaccc 19754349  T
Q  246 tagttgctcacaaatgactctccac 270  Q
     ||||||||||||| ||||||||||    
T  19754348 aagttgctcacaaaagactctccac 19754324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 268
Target Start/End: Complemental strand, 22079278 - 22079158
Alignment:
Q  147 caattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccc 245  Q
    |||||||||||||||||| |||||||||| |||||||||||| || |||| |||||| ||| | |||| ||||| | ||||||||| ||||||||||||     
T  22079278 caattgtttctcaactctagaatctaacccccaaaagagaac-aatccttagcctttgatttcataagcatcttatattttggtttgccaagactcacct 22079180  T
Q  246 tagttgctcacaaatgactctcc 268  Q
     ||||||||||||| ||||||||    
T  22079179 aagttgctcacaaa-gactctcc 22079158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 12318631 - 12318719
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgatttcactca 133  Q
    ||||||||||||| |||||| ||||||||||||||||||||  ||||||||||||  | ||||| ||| | | ||| ||||||||||||    
T  12318631 tagcttcaacaagctctccatgaacaaacctaatttctacccatttccaaatctctacccatgaacaagaaactcaatgatttcactca 12318719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 255
Target Start/End: Original strand, 12318725 - 12318801
Alignment:
Q  179 aaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccctagttgctca 255  Q
    ||||||||||||||||| |||||| ||| || || ||| |||| ||||||| ||||||||||||||| |||||||||    
T  12318725 aaagagaaccaacccttagcctttgatttccaaaagattttctattttggtctcccaagactcacccaagttgctca 12318801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 266
Target Start/End: Complemental strand, 25652146 - 25651922
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgattt-cactcaaccaatgtgt 143  Q
    ||||||||||||  |||| || |||| || |||||||||||| ||||  ||| |  |||||||| ||||| | ||| |||||| ||| ||   || ||||    
T  25652146 tagcttcaacaaactctcaaataacacacttaatttctaccaatttctcaatattttctcatgaacaaaatactcaatgattttcacacacttaaggtgt 25652047  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctcc-aaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| ||||||| | ||  |||||||||||||  |||    ||| |||  |||||||||||| |||||| |||||||||| ||    
T  25652046 ttacaattgtttcccaactctagaatctaccttcataaaagagaaccaattcttaatatttgattttctaaggatcttcacttttgctttcccaagattc 25651947  T
Q  242 accctagttgctcacaaatgactct 266  Q
    |||| ||||||||||| || |||||    
T  25651946 acccaagttgctcacatataactct 25651922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 9109665 - 9109733
Alignment:
Q  199 ctttaattacctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaatgactctc 267  Q
    |||| ||||||| | |||||||| ||||| |||||||||||||| || | ||||||||||| |||||||    
T  9109665 ctttgattacctcatgatcttctattttgatttcccaagactcatccaaattgctcacaaaagactctc 9109733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 28220334 - 28220389
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttcta-ccattttccaaatctc 99  Q
    |||||||||||||||| | |||||||| ||||||||||| ||||||||| ||||||    
T  28220334 tagcttcaacaagttcacaaagaacaaccctaatttctacccattttccgaatctc 28220389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 90
Target Start/End: Complemental strand, 2926561 - 2926523
Alignment:
Q  52 aacaagttctccaagaacaaacctaatttctaccatttt 90  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  2926561 aacaagttcttcaagcacaaacctaatttctaccatttt 2926523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 9109531 - 9109584
Alignment:
Q  48 cttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcct 101  Q
    ||||||||||||||||||| | |||| |||||||| ||||||||  ||||||||    
T  9109531 cttcaacaagttctccaagtaaaaacttaatttcttccattttctcaatctcct 9109584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 33775969 - 33775924
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccatttt 90  Q
    ||||||||| ||||||||||||| ||| ||||||||||| ||||||    
T  33775969 tagcttcaagaagttctccaagagcaatcctaatttctatcatttt 33775924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 3156925 - 3156885
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc 85  Q
    |||||||||||||||| | |||||||| |||||||||||||    
T  3156925 tagcttcaacaagttcacaaagaacaaccctaatttctacc 3156885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 254
Target Start/End: Complemental strand, 3331505 - 3331403
Alignment:
Q  151 tgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccctagt 249  Q
    |||||| ||||||| ||||| |||| |||||||| ||| ||||||| |||||| ||| ||||||||||| ||||||||||  || |||| |||||  |||    
T  3331505 tgtttcccaactctagaatccaacc-ccaaaaga-aacaaacccttagcctttgatttcctaaggatctcctcttttggtaccctaagattcacctaagt 3331408  T
Q  250 tgctc 254  Q
    |||||    
T  3331407 tgctc 3331403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 99
Target Start/End: Original strand, 8871175 - 8871211
Alignment:
Q  64 aagaacaaacc-taatttctaccattttccaaatctc 99  Q
    ||||||||||| |||||||||||||||||||||||||    
T  8871175 aagaacaaaccctaatttctaccattttccaaatctc 8871211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 49918410 - 49918370
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc 85  Q
    |||||||||||||||| | |||||||| |||||||||||||    
T  49918410 tagcttcaacaagttcacaaagaacaaccctaatttctacc 49918370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 9e-45; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 21593724 - 21593499
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| ||||||||||||| ||||||| ||||||  |  |||| ||| ||| ||||   ||||||||  |||| ||||    
T  21593724 tagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcacca-atgaacaagacactcatgattttcactctcccaaggtgt 21593626  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactca 242  Q
    || |||||||||| ||||||| |||||||||| |||||||||||||||||||| || ||| ||| ||||||||||||||||||||||||| |||||||||    
T  21593625 ttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagc-tttgatttcctaaggatcttctcttttggtttcacaagactca 21593527  T
Q  243 ccctagttgctcacaaatgactctccac 270  Q
    ||| ||||||||| ||||||||||||||    
T  21593526 cccaagttgctcaaaaatgactctccac 21593499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 5043687 - 5043460
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctac-cattttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | ||||||||||||||||||||| |||||||  ||||||  |  |||| ||| ||| ||||   ||||||||   ||| ||||    
T  5043687 tagcttcaacaagctcacaaagaacaaacctaatttctactcattttctcaatctca-cgaatgaacaagacactcatgattttcactctcacaaggtgt 5043589  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||| |||||||||||||||| ||| |||||| ||| | |||||||||||||||||||||||| ||||||||    
T  5043588 ttacaattgtttcccaactctagaatctaacccccaaaagagaaccaactcttagcctttgattccactaaggatcttctcttttggtttcacaagactc 5043489  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    |||| | ||||||||||| ||||||||||    
T  5043488 acccaaattgctcacaaaagactctccac 5043460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 45 - 266
Target Start/End: Original strand, 2973047 - 2973270
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||||||||||||||||| ||||||| ||||||  |  |||| ||  ||| | ||   ||||||||  |||| ||||    
T  2973047 tagcttcaacaagctcacaaagaacaaacctaatttctacccattttcccaatctcacca-atgaacacgacacttatgattttcactctcccaaggtgt 2973145  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||| | | |||||||||||||||||| |||||| ||| | |||||||||||||||||||||||| ||||||||    
T  2973146 ttacaattgtttcccaactctagaatctaatccctaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactc 2973245  T
Q  242 accctagttgctcacaaatgactct 266  Q
    |||| ||||| ||||||||||||||    
T  2973246 acccaagttgttcacaaatgactct 2973270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 45 - 266
Target Start/End: Original strand, 26830231 - 26830455
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | ||||||||  |||||||||||| ||||| | ||||||  |  |||| ||| ||| ||||   ||||||||  |||| ||||    
T  26830231 tagcttcaacaagctcacaaagaacaactctaatttctacccatttttccaatctcacccaatgaacaagacactcatgattttcactctcccaaggtgt 26830330  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||  ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | ||||| |||||||||||||||||| ||||||||    
T  26830331 ttacaattgttttccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagaatcttctcttttggtttcacaagactc 26830430  T
Q  242 accctagttgctcacaaatgactct 266  Q
     ||| ||||||||||||||||||||    
T  26830431 gcccaagttgctcacaaatgactct 26830455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 135 - 270
Target Start/End: Original strand, 603278 - 603415
Alignment:
Q  135 ccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttc 232  Q
    |||| |||||| |||||||||| ||||||| |||||||||| ||||||||||||||||| || |||||| ||| | ||||||||||||||||||||||||    
T  603278 ccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaaccattagcctttgatttcactaaggatcttctcttttggtttc 603377  T
Q  233 ccaagactcaccctagttgctcacaaatgactctccac 270  Q
     |||||||||||| ||||||||||||| ||| ||||||    
T  603378 acaagactcacccaagttgctcacaaaggacactccac 603415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 17763050 - 17762822
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgattt-cactcaaccaatgtg 142  Q
    ||||||||||||| || | |||||||| ||||||||||||| ||||||  ||||||  |  |||| ||| ||| ||||  |||| |||||   ||| |||    
T  17763050 tagcttcaacaagctcacaaagaacaaccctaatttctacccattttctcaatctcacca-atgaacaagacactcatgaattttcactctctcaaagtg 17762952  T
Q  143 tttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagact 240  Q
    ||| |||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | |||||||||||||||||| ||||| |||||||    
T  17762951 tttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctctttttgtttcacaagact 17762852  T
Q  241 caccctagttgctcacaaatgactctccac 270  Q
    ||||| |||||||| |||| ||||||||||    
T  17762851 cacccaagttgctcccaaaagactctccac 17762822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 3808897 - 3809043
Alignment:
Q  125 tttcactcaaccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctc 222  Q
    ||||||||  |||| |||||| |||||||||| ||||||| |||||||||| |||||| ||||||||||||| |||||| ||| | |||||||| |||||    
T  3808897 tttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaa-agaaccaacccttagcctttgatttcactaaggattttctc 3808995  T
Q  223 ttttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||||    
T  3808996 ttttggttttacaagactcacccaagttgctcacaaatgactctccac 3809043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 214
Target Start/End: Complemental strand, 25073628 - 25073457
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgtt 144  Q
    |||||| |||||| || | ||||| ||| |||||||||||||||||   ||||||||| ||||| ||| | | ||| |||||||||||| ||||  ||||    
T  25073628 tagctttaacaagctcacgaagaataaatctaatttctaccattttttcaatctcctcccatgaacaagatactcaatgatttcactcacccaagatgtt 25073529  T
Q  145 tgc-aattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaagg 214  Q
    | | ||||||||| ||||||| |||||||||| ||||||||||| |||||||| |||||||||| |||||||    
T  25073528 tcccaattgtttcccaactctagaatctaacccccaaaagagaatcaacccttagcctttaatttcctaagg 25073457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 125 - 266
Target Start/End: Original strand, 22425016 - 22425156
Alignment:
Q  125 tttcactcaaccaatgtgtttgcaattgtttctcaactctg-aatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctct 223  Q
    ||||||||  |||| |||||| |||||||||| |||||||  ||||||||| |||||||||||||||||||| || ||| ||| ||||||||| ||||||    
T  22425016 tttcactctcccaaagtgtttacaattgtttcccaactctataatctaacc-ccaaaagagaaccaacccttagc-tttgatttcctaaggatattctct 22425113  T
Q  224 tttggtttcccaagactcaccctagttgctcacaaatgactct 266  Q
    ||||||||| ||||||| |||  ||||||||  ||||||||||    
T  22425114 tttggtttcacaagactaaccgaagttgctcttaaatgactct 22425156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 17757973 - 17757917
Alignment:
Q  214 gatcttctcttttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||||| ||||||||||    
T  17757973 gatcttctctttttgtttcacaagactcacccaagttgctcacaaaagactctccac 17757917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 265
Target Start/End: Original strand, 5740975 - 5741120
Alignment:
Q  122 tgatttcactcaaccaatgtgtttgc-aattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatctt 219  Q
    |||||||||||| | || |||||| | ||||||||  ||||| | |||||||||| || |||   ||||||||||| |||||| |||  |||||||||||    
T  5740975 tgatttcactcaccgaaggtgttttccaattgttttccaactttagaatctaaccccccaaaagtaaccaacccttagcctttgatttactaaggatctt 5741074  T
Q  220 ctcttttggtttcccaagactcaccctagttgctcacaaatgactc 265  Q
    | ||||| ||||| ||||| |||||| | ||||||||||| |||||    
T  5741075 cactttttgtttctcaagattcacccaaattgctcacaaaagactc 5741120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 186771 - 186729
Alignment:
Q  48 cttcaacaagttctccaagaacaaacctaatttctaccatttt 90  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  186771 cttcaacaagctctccaagaacaaaccttatttctaccatttt 186729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 5406316 - 5406362
Alignment:
Q  53 acaagttctccaagaacaaacctaatttctaccattttccaaatctc 99  Q
    |||||||| | |||||||| |||||||||||||||||||| ||||||    
T  5406316 acaagttcacaaagaacaaccctaatttctaccattttcccaatctc 5406362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 5410641 - 5410687
Alignment:
Q  53 acaagttctccaagaacaaacctaatttctaccattttccaaatctc 99  Q
    |||||||| | |||||||| |||||||||||||||||||| ||||||    
T  5410641 acaagttcacaaagaacaaccctaatttctaccattttcccaatctc 5410687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 31404791 - 31404837
Alignment:
Q  53 acaagttctccaagaacaaacctaatttctaccattttccaaatctc 99  Q
    |||||||| | |||||||| |||||||||||||||||||| ||||||    
T  31404791 acaagttcacaaagaacaaccctaatttctaccattttcccaatctc 31404837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 239
Target Start/End: Complemental strand, 25073076 - 25073048
Alignment:
Q  211 aaggatcttctcttttggtttcccaagac 239  Q
    |||||||||||||||||||||||||||||    
T  25073076 aaggatcttctcttttggtttcccaagac 25073048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 4e-44; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 379440 - 379212
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattga--tttcactcaaccaatgt 141  Q
    ||||||||||||| || | |||||||||||||||||||||| ||||||  ||||||  |  |||| ||| | | | |||||  ||||||||  |||| ||    
T  379440 tagcttcaacaagctcacaaagaacaaacctaatttctacccattttctcaatctca-caaatgaacaagatactaattgaattttcactctcccaaggt 379342  T
Q  142 gtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagact 240  Q
    |||| |||||||||| ||||||| ||||||||||  ||||||||||||||||||| |||||| ||| |||||||||||||||||||| |||| |||||||    
T  379341 gtttacaattgtttcccaactctagaatctaacccacaaaagagaaccaacccttagcctttgatttcctaaggatcttctcttttgatttcacaagact 379242  T
Q  241 caccctagttgctcacaaatgactctccac 270  Q
    ||||| ||||||||||||||||||||||||    
T  379241 cacccaagttgctcacaaatgactctccac 379212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 129 - 270
Target Start/End: Complemental strand, 33989837 - 33989695
Alignment:
Q  129 actcaaccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttg 227  Q
    |||||||||| |||||| || ||||||| ||||||| ||||||||||||||||||||||| || |||| |||||| ||||||||||||||||||||||||    
T  33989837 actcaaccaaggtgtttacagttgtttcccaactctagaatctaacctccaaaagagaacaaatccttagcctttgattacctaaggatcttctcttttg 33989738  T
Q  228 gtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    |||||  ||||||||||| ||||||||||||||||||||||||    
T  33989737 gtttcaaaagactcacccaagttgctcacaaatgactctccac 33989695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 266
Target Start/End: Complemental strand, 12073452 - 12073229
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||||||||||||||||| ||||||| ||||||  |  || ||||| ||| ||||   |||||| |  |||| ||||    
T  12073452 tagcttcaacaagctcacaaagaacaaacctaatttctacccattttcccaatctcacca-ataagcaagacactcatgattttcacactcccaaggtgt 12073354  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||| |||||||||||||||||||| || ||| ||| | ||||||||||||||||||||||||  |||||||    
T  12073353 ttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcatttgatttcactaaggatcttctcttttggtttcataagactc 12073254  T
Q  242 accctagttgctcacaaatgactct 266  Q
    |||| ||||||||||||| ||||||    
T  12073253 acccaagttgctcacaaaagactct 12073229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 50674034 - 50674181
Alignment:
Q  125 tttcactcaaccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctc 222  Q
    ||||||||  |||| |||||| |||||||||  ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | ||||||||||||||    
T  50674034 tttcactctcccaaggtgtttacaattgttttccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctc 50674133  T
Q  223 ttttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    |||||||||| |||||||||||| ||||||||||||| ||||||||||    
T  50674134 ttttggtttcacaagactcacccaagttgctcacaaaagactctccac 50674181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 270
Target Start/End: Original strand, 55085473 - 55085700
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgattt-cactcaaccaatgtg 142  Q
    ||||||||||||| || | |||||||| | ||||||||||| ||||||||| ||||  |  |||| ||| ||| ||| |||||| |||||| |||| |||    
T  55085473 tagcttcaacaagctcacaaagaacaaccttaatttctacctattttccaa-tctcacca-atgaacaagacagtcaatgattttcactcacccaaggtg 55085570  T
Q  143 tttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagact 240  Q
    ||| ||||||||||  |||||| |||||||||| ||||| ||||| |||||||| |||||| ||| | |||||||||||||||||||||||| |||||||    
T  55085571 tttacaattgtttccgaactctagaatctaacccccaaaggagaatcaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagact 55085670  T
Q  241 caccctagttgctcacaaatgactctccac 270  Q
    ||| | ||||||||||||||||||||||||    
T  55085671 cacacaagttgctcacaaatgactctccac 55085700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 45 - 266
Target Start/End: Complemental strand, 54883080 - 54882857
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | || ||||| ||||||||||||| ||||||| ||||||  |  |||| ||| ||| ||||   ||||||||  |||| ||||    
T  54883080 tagcttcaacaagctcacaaaaaacaaccctaatttctacccattttcccaatctcacca-atgaacaagacactcatgattttcactctcccaaggtgt 54882982  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | |||||||||||||||||||||||| | ||||||    
T  54882981 ttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacgagactc 54882882  T
Q  242 accctagttgctcacaaatgactct 266  Q
    |||| |||| |||||||| ||||||    
T  54882881 acccaagtttctcacaaaagactct 54882857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 135 - 267
Target Start/End: Complemental strand, 41964384 - 41964251
Alignment:
Q  135 ccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttc 232  Q
    |||| |||||| |||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | ||||||||||||||||||||||||    
T  41964384 ccaaggtgtttacaattgtttcccaactctagaatctaacc-ccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttc 41964286  T
Q  233 ccaagactcaccctagttgctcacaaatgactctc 267  Q
     |||||||||||| ||||||||||||| |||||||    
T  41964285 acaagactcacccaagttgctcacaaaagactctc 41964251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 148 - 270
Target Start/End: Complemental strand, 26364222 - 26364098
Alignment:
Q  148 aattgtttctcaactctgaa-tctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactcaccc 245  Q
    ||||||||| ||||||| || ||||||| |||||||||||||||||||| || ||| ||| | |||||||||||||||||||||||| ||||||||||||    
T  26364222 aattgtttcccaactctaaaatctaaccaccaaaagagaaccaacccttagcatttgatttcactaaggatcttctcttttggtttcacaagactcaccc 26364123  T
Q  246 tagttgctcacaaatgactctccac 270  Q
     ||||||||||||||||||||||||    
T  26364122 aagttgctcacaaatgactctccac 26364098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 269
Target Start/End: Complemental strand, 35662405 - 35662276
Alignment:
Q  140 gtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaaga 238  Q
    |||||| |||||||||| ||||||| |||||||||  |||||||||||||||||||| || ||| ||| ||||||||||||||||||||||||| |||||    
T  35662405 gtgtttacaattgtttcccaactctagaatctaacacccaaaagagaaccaacccttagc-tttgatttcctaaggatcttctcttttggtttcacaaga 35662307  T
Q  239 ctcaccctagttgctcacaaatgactctcca 269  Q
    ||||||| |||||||||||||  ||||||||    
T  35662306 ctcacccaagttgctcacaaagaactctcca 35662276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 8665468 - 8665240
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgattt-cactcaaccaatgtg 142  Q
    ||||||||||||| |||| |||||||| ||||||||||||| ||||||| | ||||  |  |||| ||| ||| ||||  |||| |||||  |||| |||    
T  8665468 tagcttcaacaagctctcaaagaacaaccctaatttctacccattttcccattctcacca-atgaacaagacactcatgaattttcactcttccaaggtg 8665370  T
Q  143 tttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagact 240  Q
    ||| |||||||||| ||||||  |||||||||| |||||||| ||||||| | |  ||||| ||| | |||||||||||||||||||||||| |||||||    
T  8665369 tttacaattgtttcccaactccagaatctaacccccaaaagaaaaccaacacataacctttgatttcactaaggatcttctcttttggtttcacaagact 8665270  T
Q  241 caccctagttgctcacaaatgactctccac 270  Q
    ||||| ||||||||||||| ||||||||||    
T  8665269 cacccaagttgctcacaaaagactctccac 8665240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 258
Target Start/End: Complemental strand, 32091534 - 32091324
Alignment:
Q  49 ttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgttt-gc 147  Q
    ||||||||  ||||||||||||||||||||||||| |||||||| ||||| ||| ||||| ||| | | ||| ||||||| |||| |||||||||||  |    
T  32091534 ttcaacaaactctccaagaacaaacctaatttctagcattttcccaatcttctcccatgaacaagagactcaatgatttcgctcacccaatgtgtttctc 32091435  T
Q  148 aattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccct 246  Q
    |||||||||  |||| | |||||| ||| |||||| ||||||||| ||| |||||| ||| ||||||||||||||| | |||| |||||| ||| ||||     
T  32091434 aattgtttccaaactttagaatcttacc-ccaaaaaagaaccaacactttgcctttgatttcctaaggatcttctcctctggtctcccaaaacttaccca 32091336  T
Q  247 agttgctcacaa 258  Q
    ||||| ||||||    
T  32091335 agttgttcacaa 32091324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 269
Target Start/End: Complemental strand, 46703560 - 46703334
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctac-cattttccaaatctcctctcatgagcaaaacattcattgattt-cactcaaccaatgtg 142  Q
    |||||| |||||| || | |||||||| |||||||||||| |||||||| ||||||  |  |||| ||| ||| ||||  |||| |||||  |||| |||    
T  46703560 tagcttaaacaagctcacaaagaacaaccctaatttctactcattttcccaatctcacca-atgaacaagacactcatgaattttcactctcccaaggtg 46703462  T
Q  143 tttgcaattgtttctcaactctg-aatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactc 241  Q
    ||| |||||||||| |||| ||  ||||||||| ||||||||||||||||  || |||||| ||| ||||||||| ||||||||||||||| ||||||||    
T  46703461 tttacaattgtttcccaacactataatctaacccccaaaagagaaccaacttttagcctttgatttcctaaggattttctcttttggtttcacaagactc 46703362  T
Q  242 accctagttgctcacaaatgactctcca 269  Q
    |||| ||||||| ||||| |||||||||    
T  46703361 acccaagttgctgacaaaagactctcca 46703334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 6655936 - 6655789
Alignment:
Q  125 tttcactcaaccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctc 222  Q
    ||||||||  |||| |||||| |||||||||| ||||||| |||||||||| | ||||||||| ||||| || |||||| |||   |||| |||||||||    
T  6655936 tttcactctcccaaggtgtttacaattgtttcccaactctagaatctaaccccaaaaagagaaacaacctttagcctttgattttactaatgatcttctc 6655837  T
Q  223 ttttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    |||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  6655836 ttttggtttcacaagactcacccaagttgctcagaaatgactctccac 6655789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 241
Target Start/End: Complemental strand, 2209773 - 2209575
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | ||||| || ||||||||||||| ||||||| ||||||  |  |||| ||| ||| ||||   ||||||||  |||| ||||    
T  2209773 tagcttcaacaagctcacaaagaaaaaccctaatttctacccattttcccaatctcaaca-atgaacaagacactcatgattttcactctcccaaggtgt 2209675  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || ||||| |||| ||||||| |||||||||| |||||||||||||||||| | |||||| ||| | |||||||||||||||||||||||| ||||||||    
T  2209674 ttacaattatttcccaactctagaatctaacccccaaaagagaaccaacccatagcctttgatttcactaaggatcttctcttttggtttcacaagactc 2209575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 50262886 - 50263033
Alignment:
Q  125 tttcactcaaccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctc 222  Q
    ||||||||  |||| || ||| |||||||||| ||||||| |||||||||| ||||||||||||||||| || |||||| ||| | |||||| |||||||    
T  50262886 tttcactctcccaaggtatttacaattgtttcccaactctagaatctaacccccaaaagagaaccaaccattagcctttgatttcactaagggtcttctc 50262985  T
Q  223 ttttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    |||||||||| ||||| |||||   |||||||||||| ||||||||||    
T  50262986 ttttggtttcacaagagtcaccgaggttgctcacaaaagactctccac 50263033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 250
Target Start/End: Complemental strand, 41961468 - 41961264
Alignment:
Q  54 caagttctccaagaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgtttgc------ 147  Q
    |||| |||||| |||||||| ||||||||||  |||| | |||||| |||||||| ||| | | ||| |||||||| ||| |||| |||||| |          
T  41961468 caagctctccatgaacaaacttaatttctactctttttccaatctcttctcatgaacaagagactcaatgatttcaatcagccaaggtgtttccctttcc 41961369  T
Q  148 -aattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccc 245  Q
     ||||||||| ||||||| ||||||||||  ||||||||||||||||||| || ||| ||| ||||||||| |||| ||||||| |||||||||||||||    
T  41961368 caattgtttcccaactctagaatctaaccctcaaaagagaaccaacccttagcttttgatttcctaaggatattcttttttggtctcccaagactcaccc 41961269  T
Q  246 tagtt 250  Q
     ||||    
T  41961268 aagtt 41961264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 262
Target Start/End: Complemental strand, 12119599 - 12119380
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacc-taatttctac-cattttccaaatctcctctcatgagcaaaacattcattgattt-cactcaaccaatgt 141  Q
    ||||||||| |||||| | ||||||||||| |||||||||| | |||| | ||||||  || |||| ||| ||| |||||||||| |||||  |||| ||    
T  12119599 tagcttcaaaaagttcacaaagaacaaaccataatttctactcttttttccaatctcacct-atgaacaagacactcattgattttcactctcccaaggt 12119501  T
Q  142 gtttgcaattgtttctcaactctg-aatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagact 240  Q
     ||| |||||||||| |||||||  ||||||||| ||||||||||||||||||||   |||  ||| | ||||||||||||||||||||||| ||||||     
T  12119500 atttacaattgtttcccaactctataatctaacccccaaaagagaaccaaccctt-aacttcgatttcttaaggatcttctcttttggtttcacaagaca 12119402  T
Q  241 caccctagttgctcacaaatga 262  Q
    ||||| | ||||||||||||||    
T  12119401 cacccaaattgctcacaaatga 12119380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 8648118 - 8647971
Alignment:
Q  125 tttcactcaaccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctc 222  Q
    ||||||||  |||| |||||| || |||||||  |||||  |||||||||| |||||||||||||||| | |  | ||| ||| | ||||||||||||||    
T  8648118 tttcactcttccaaggtgtttacagttgtttcctaactccagaatctaacccccaaaagagaaccaacacataacatttgatttcactaaggatcttctc 8648019  T
Q  223 ttttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    ||||| |||| |||||||||||| ||||||||||||| ||||||||||    
T  8648018 ttttgatttcacaagactcacccaagttgctcacaaaagactctccac 8647971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 40630879 - 40630817
Alignment:
Q  208 cctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||    
T  40630879 cctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccac 40630817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 195
Target Start/End: Complemental strand, 40632505 - 40632354
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | ||||||||  |||||||||||| ||||||| ||||||  |  |||| ||| ||| ||||   ||||||||  |||| ||||    
T  40632505 tagcttcaacaagctcacaaagaacaactctaatttctacccattttcccaatctcacca-atgaacaagacactcatgattttcactctcccaaggtgt 40632407  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaaccctt 195  Q
    || |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  40632406 ttacaattgtttctcaactctagaatctaacccccaaaagagaaccaaccctt 40632354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 33089825 - 33089754
Alignment:
Q  166 aatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaag 237  Q
    ||||||||||||||||||||||||||| || |||||| |||  ||||||||||||||||||||| |||||||    
T  33089825 aatctaacctccaaaagagaaccaacctttagcctttgattttctaaggatcttctcttttggtctcccaag 33089754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 268
Target Start/End: Complemental strand, 3786017 - 3785926
Alignment:
Q  176 ccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaatgactctcc 268  Q
    |||||||||||||||| ||| |||||| ||| ||||||||| |||||||||||| ||||||||||| | | | ||||||||||| ||||||||    
T  3786017 ccaaaagagaaccaactcttagcctttgatttcctaaggatattctcttttggtctcccaagactcgcacaatttgctcacaaa-gactctcc 3785926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 34112549 - 34112445
Alignment:
Q  166 aatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaatgactc 265  Q
    |||||| | |||||||||||||||| | || |||||| ||| |||||||||||||  ||||| ||| |||||| ||| || ||||||||||| |||||||    
T  34112549 aatctaccttccaaaagagaaccaaactttagcctttgatttcctaaggatcttcagttttgtttttccaagattcatccaagttgctcacagatgactc 34112450  T
Q  266 tccac 270  Q
    |||||    
T  34112449 tccac 34112445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 26699634 - 26699780
Alignment:
Q  125 tttcactcaaccaatgtgtttgcaattgtttctcaactctg-aatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctct 223  Q
    ||||||||| |||| |||||| |||||||||| ||||| |  ||||||||| | ||||||||||||||| ||  ||||| ||||| ||| |||| |||||    
T  26699634 tttcactcacccaaagtgtttacaattgtttcccaactttataatctaacccctaaaagagaaccaacctttaacctttgattacataaagatcatctct 26699733  T
Q  224 tttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    ||| |||| | |||||||| |  ||||| |||| ||||| |||||||    
T  26699734 tttagttttctaagactcatctgagttgttcactaatgaatctccac 26699780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 27417165 - 27417271
Alignment:
Q  141 tgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaaga 238  Q
    ||||| ||||||||||  |||||  |||||||||| |||||||||||||||||||| | |||| ||| | ||||||||||||| |||||||||  |||||    
T  27417165 tgtttacaattgtttcaaaactcaagaatctaacccccaaaagagaaccaacccttagtctttgatttcactaaggatcttcttttttggttttacaaga 27417264  T
Q  239 ctcaccc 245  Q
    |||||||    
T  27417265 ctcaccc 27417271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 22882994 - 22883077
Alignment:
Q  176 ccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaa 259  Q
    ||||||||||||||||| ||  ||||| |||  ||||||||||||||||||||| ||| ||||||| ||| | |||||||||||    
T  22882994 ccaaaagagaaccaaccattatcctttgattttctaaggatcttctcttttggtctcctaagactcgcccaaattgctcacaaa 22883077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 22934658 - 22934741
Alignment:
Q  176 ccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaa 259  Q
    ||||||||||||||||| ||  ||||| |||  ||||||||||||||||||||| ||| ||||||| ||| | |||||||||||    
T  22934658 ccaaaagagaaccaaccattatcctttgattttctaaggatcttctcttttggtctcctaagactcgcccaaattgctcacaaa 22934741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 268
Target Start/End: Original strand, 35370576 - 35370669
Alignment:
Q  174 ctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaatgactctcc 268  Q
    ||||||||||||||||||| || |||||| ||| || || |||||||| ||||||| |||  |||||||||| ||||||| ||||| ||||||||    
T  35370576 ctccaaaagagaaccaaccattagcctttgatttcccaaagatcttctattttggtatccatagactcacccaagttgcttacaaa-gactctcc 35370669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 44967939 - 44968049
Alignment:
Q  47 gcttcaacaagttctccaagaacaaa-cctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgttt 145  Q
    |||||| |||| ||||||||| |||| |||||||||||||||||||| |||||| || || || ||| |   ||| |||||||||||||||||| |||||    
T  44967939 gcttcagcaagctctccaagagcaaaacctaatttctaccattttcccaatctcttcccaagaacaacaggctcaatgatttcactcaaccaatttgttt 44968038  T
Q  146 gcaattgtttc 156  Q
     ||| ||||||    
T  44968039 acaaatgtttc 44968049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 161
Target Start/End: Complemental strand, 6677529 - 6677412
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaa--cctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtg 142  Q
    ||||||||||||| |||||||||| |||  |||||||||||||||||||| ||| || || || || ||| | | ||| | |||||||||| ||||||||    
T  6677529 tagcttcaacaagctctccaagaaaaaaaacctaatttctaccattttcc-aatttcttcccaagaacaagagactcaattatttcactcatccaatgtg 6677431  T
Q  143 tttgcaattgtttctcaac 161  Q
    ||| ||| |||||| ||||    
T  6677430 tttacaaatgtttcccaac 6677412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 34788886 - 34788930
Alignment:
Q  48 cttcaacaagttctccaagaacaaacctaatttctaccattttcc 92  Q
    |||||||||| ||||||||| ||| ||||||||||||||||||||    
T  34788886 cttcaacaagctctccaagagcaatcctaatttctaccattttcc 34788930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 9927566 - 9927621
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttcta-ccattttccaaatctc 99  Q
    |||||||||||||||| | |||||||| ||||||||||| ||||||||| ||||||    
T  9927566 tagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctc 9927621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 26364296 - 26364241
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttcta-ccattttccaaatctc 99  Q
    |||||||||||||||| | |||||||| ||||||||||| ||||||||| ||||||    
T  26364296 tagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctc 26364241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 34570522 - 34570577
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctc 99  Q
    |||||||||||||||| | |||||||| ||||||||||||| ||||||| ||||||    
T  34570522 tagcttcaacaagttcacaaagaacaaccctaatttctacctattttcccaatctc 34570577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 35369681 - 35369763
Alignment:
Q  176 ccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaa 259  Q
    |||||||||||||||||||| |||||| ||| || || |||||||| ||||| | |||  |||||||||| ||||||| |||||    
T  35369681 ccaaaagagaaccaacccttagcctttgatt-cccaaagatcttctattttgctatccatagactcacccaagttgcttacaaa 35369763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 54200014 - 54200069
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttcta-ccattttccaaatctc 99  Q
    |||||||||||||||| | |||||||| ||||||||||| ||||||||| ||||||    
T  54200014 tagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctc 54200069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 33089938 - 33089900
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttcta 83  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  33089938 tagcttcaacaagctctccaagaacaaacataatttcta 33089900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 90
Target Start/End: Complemental strand, 27994871 - 27994835
Alignment:
Q  53 acaagttctccaagaacaaacctaatttctaccatttt 90  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  27994871 acaagttctccaagaacaa-cctaatttctaccatttt 27994835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 44570478 - 44570519
Alignment:
Q  49 ttcaacaagttctccaagaacaaacctaatttctaccatttt 90  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||    
T  44570478 ttcaacaagctctccaacaacaaacataatttctaccatttt 44570519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 48143103 - 48143058
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccatttt 90  Q
    |||||||||||||||| | |||||||| ||||||||||||| ||||    
T  48143103 tagcttcaacaagttcacaaagaacaaccctaatttctaccttttt 48143058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 56178745 - 56178790
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccatttt 90  Q
    |||||||||||||||| | |||||||| ||||||||||||| ||||    
T  56178745 tagcttcaacaagttcacaaagaacaaccctaatttctaccctttt 56178790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 5349970 - 5349930
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc 85  Q
    ||||||| |||||||| | ||||||||||||||||||||||    
T  5349970 tagcttcgacaagttcacaaagaacaaacctaatttctacc 5349930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 52467462 - 52467502
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc 85  Q
    ||||||||||||| || | ||||||||||||||||||||||    
T  52467462 tagcttcaacaagctcacaaagaacaaacctaatttctacc 52467502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 4e-41; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 44353853 - 44353625
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttc-actcaaccaatgtg 142  Q
    |||||||||||||||| | |||||||| ||||||||||||| ||||||| ||||||  |  |||| ||| | | ||| ||||||  ||||| ||||||||    
T  44353853 tagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctca-caaatgaacaagatactcaatgatttttactcacccaatgtg 44353755  T
Q  143 tttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagact 240  Q
    ||| |||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | ||||| ||||| |||||||||||| |||||||    
T  44353754 tttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagaatcttttcttttggtttcacaagact 44353655  T
Q  241 caccctagttgctcacaaatgactctccac 270  Q
    ||||| ||||||||||  ||||||||||||    
T  44353654 cacccaagttgctcaccgatgactctccac 44353625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 11384045 - 11383819
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||  || | |||||||| ||||||||||||| ||||| | |||||| |   |||| ||| ||| ||||   ||||||||  |||| ||||    
T  11384045 tagcttcaacaaactcacaaagaacaaccctaatttctacccatttttccaatctcata--atgaacaagacactcatgattttcactctcccaaggtgt 11383948  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || ||||| |||| ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | |||||||||||||||||||||||| ||||||||    
T  11383947 ttacaattatttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactc 11383848  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    |||| ||||||||||||| |||| |||||    
T  11383847 acccaagttgctcacaaaagactttccac 11383819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 45 - 269
Target Start/End: Original strand, 42435099 - 42435325
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| ||||||||||||| ||||| | ||||||  |  |||| ||| ||| ||||   ||||||||  |||| ||||    
T  42435099 tagcttcaacaagctcacaaagaacaaccctaatttctacccatttttccaatctcacca-atgaacaagacactcatgattttcactctcccaaagtgt 42435197  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||  ||||||| ||||||||||  ||||||||||||||||||| |||||| ||| | |||||||||||||||||||||||| ||||||||    
T  42435198 ttacaattgtttaccaactctagaatctaaccctcaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactc 42435297  T
Q  242 accctagttgctcacaaatgactctcca 269  Q
    || | ||||||||||||| |||||||||    
T  42435298 actcaagttgctcacaaaagactctcca 42435325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 64 - 266
Target Start/End: Complemental strand, 40328820 - 40328616
Alignment:
Q  64 aagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgtttgcaattgtttctcaact 162  Q
    |||||||||||||||||||||| ||||||| ||||||  |  |||| ||| ||||||||   ||||||||  ||||  ||||| |||||||||| |||||    
T  40328820 aagaacaaacctaatttctacccattttcccaatctca-caaatgaacaagacattcatgattttcactctcccaagatgtttacaattgtttcccaact 40328722  T
Q  163 ct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaat 260  Q
    || |||||||||| |||||||||||||||| | | |||||| ||| | |||| ||||||||||||||||||| |||||||||||| |||||||||||||     
T  40328721 ctagaatctaacccccaaaagagaaccaactcatagcctttgatttcactaaagatcttctcttttggtttcacaagactcacccaagttgctcacaaaa 40328622  T
Q  261 gactct 266  Q
    ||||||    
T  40328621 gactct 40328616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 4283584 - 4283357
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | || ||||| ||||||||||||| ||||||| ||||||  |  |||| ||| ||| ||||   ||||||||  | || ||||    
T  4283584 tagcttcaacaagctcacaaaaaacaaccctaatttctacccattttcccaatctcacca-atgaacaagacactcatgattttcactctcctaaggtgt 4283486  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | |||||||||||||||||||||||| ||||||||    
T  4283485 ttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactc 4283386  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    | || |||| |||||||| |||| |||||    
T  4283385 aaccaagtttctcacaaaagactttccac 4283357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 125 - 270
Target Start/End: Complemental strand, 40221725 - 40221578
Alignment:
Q  125 tttcactcaaccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctc 222  Q
    ||||||||  |||| |||||| |||||||||| ||||||| |||||||||| ||||||||||||||||| || |||||| ||| | ||||||||||||||    
T  40221725 tttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacctttagcctttgatttcactaaggatcttctc 40221626  T
Q  223 ttttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    |||||||||  |||||||||||  ||||||||||||| ||||||||||    
T  40221625 ttttggttttacaagactcacctaagttgctcacaaaagactctccac 40221578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 258
Target Start/End: Complemental strand, 18655460 - 18655246
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| | ||||||||||| ||||||  ||||||  |  |||| ||||||| ||||   ||||||||  |||| ||||    
T  18655460 tagcttcaacaagctcacaaagaacaaccttaatttctacccattttctcaatctcacca-atgaacaaaacactcatgattttcactctcccaaggtgt 18655362  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || ||||||||||  || ||| |||||||||| ||||||||| | |||||||| |||||| ||| | ||||||||||||||||||| |||| ||||||||    
T  18655361 ttacaattgtttcctaagtctagaatctaacc-ccaaaagagtatcaacccttagcctttgatttcactaaggatcttctcttttgatttcacaagactc 18655263  T
Q  242 accctagttgctcacaa 258  Q
    |||  ||||||||||||    
T  18655262 accgaagttgctcacaa 18655246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 176 - 268
Target Start/End: Complemental strand, 40585652 - 40585561
Alignment:
Q  176 ccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaatgactctcc 268  Q
    |||||||||||||||||||| | |||| ||| |||||||||||||||||||||| | |||| |||||||| | ||||||||||| ||||||||    
T  40585652 ccaaaagagaaccaacccttagtctttgatttcctaaggatcttctcttttggtctaccaatactcacccaaattgctcacaaa-gactctcc 40585561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 9633816 - 9633869
Alignment:
Q  214 gatcttctcttttggtttcccaagactcaccctagttgctcacaaatgactctc 267  Q
    ||||||||| |||||||||| |||| |||||| |||||||||||||||||||||    
T  9633816 gatcttctcgtttggtttcctaagattcacccaagttgctcacaaatgactctc 9633869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 33655548 - 33655628
Alignment:
Q  179 aaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaa 259  Q
    |||||||||||||||||  ||||| |||  ||||||||||||||||||| | ||| |||| |||||| | |||||||||||    
T  33655548 aaagagaaccaacccttaacctttgattttctaaggatcttctcttttgttctcctaagattcacccaaattgctcacaaa 33655628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 4162557 - 4162517
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc 85  Q
    |||||||||||||||||| |||||||||||||| |||||||    
T  4162557 tagcttcaacaagttctcaaagaacaaacctaacttctacc 4162517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 29796431 - 29796491
Alignment:
Q  46 agcttcaacaagttctccaagaacaaacc-taatttctaccattttccaaatctcctctca 105  Q
    ||||||||||||||||||||||||||||| | ||||||||  |||||| |||||| |||||    
T  29796431 agcttcaacaagttctccaagaacaaaccttgatttctactcttttcccaatctcttctca 29796491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 15212846 - 15212791
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttcta-ccattttccaaatctc 99  Q
    |||||||||||||||| | |||||||| ||||||||||| ||||||||| ||||||    
T  15212846 tagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctc 15212791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 91
Target Start/End: Complemental strand, 11137085 - 11137039
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccattttc 91  Q
    ||||||||||||||||| |||| ||| || |||||||||||||||||    
T  11137085 tagcttcaacaagttcttcaaggacatacttaatttctaccattttc 11137039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 41267024 - 41266982
Alignment:
Q  50 tcaacaagttctccaagaacaaa-cctaatttctaccattttc 91  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  41267024 tcaacaagttctctaagaacaaaacctaatttctaccattttc 41266982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 12702742 - 12702787
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccatttt 90  Q
    |||||||||||||||| | |||||||| ||||||||||||| ||||    
T  12702742 tagcttcaacaagttcacaaagaacaaccctaatttctaccctttt 12702787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 42498254 - 42498209
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccatttt 90  Q
    |||||||||||||||| | |||||||| ||||||||||||| ||||    
T  42498254 tagcttcaacaagttcacaaagaacaaccctaatttctaccttttt 42498209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 32902282 - 32902370
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgatttcactca 133  Q
    |||||||||||   |||||| |||||||| |||||||||||  |||   ||||||||||||||| ||| | | ||| ||||||||||||    
T  32902282 tagcttcaacagagtctccatgaacaaacataatttctacccatttatcaatctcctctcatgatcaagagactcaatgatttcactca 32902370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 270
Target Start/End: Original strand, 2361080 - 2361306
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| ||||||||||||| ||||||| ||||||  |  |||| ||| ||| ||||   ||||||||  |||| ||||    
T  2361080 tagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcacca-atgaacaagacactcatgattttcactctcccaaggtgt 2361178  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||||| |||||||||||||||||| |||||| ||| | ||||||||||||||||||||||||  |||||||    
T  2361179 ttacaattgtttcccaactctagaatctaacctc-aaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcataagactc 2361277  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    |||| ||||||||||||| ||||||||||    
T  2361278 acccaagttgctcacaaaagactctccac 2361306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 270
Target Start/End: Original strand, 34310824 - 34311051
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    |||||||||||| ||| | |||||||| ||||||||||||| ||||||| ||||||  |  |||| ||| ||| ||||   ||||||||  |||| ||||    
T  34310824 tagcttcaacaatttcacaaagaacaaccctaatttctacccattttcccaatctcacca-atgaacaagacactcatgattttcactctcccaaggtgt 34310922  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || ||||| |||| ||||||| |||||||||| ||||||||||||||||| || |||||| ||| | |||||||||||||||||||||||| ||||||||    
T  34310923 ttacaattatttcccaactctagaatctaacccccaaaagagaaccaacctttagcctttgatttcactaaggatcttctcttttggtttcacaagactc 34311022  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    |||| ||||||||||||| ||||||||||    
T  34311023 acccaagttgctcacaaaagactctccac 34311051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 45 - 267
Target Start/End: Original strand, 48599442 - 48599666
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| ||||||||||||| ||||||| ||| ||  |  |||| ||| ||| ||||   ||||||||  |||| ||||    
T  48599442 tagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatatcacca-atgaacaagacaatcatgattttcactcctccaaggtgt 48599540  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||| ||||| |||||||||||||||||||| |||||| ||| | |||||||||||||||||||||||| ||||||||    
T  48599541 ttacaattgtttcccaactctagaatataacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactc 48599640  T
Q  242 accctagttgctcacaaatgactctc 267  Q
    |||| ||||||||||||| |||||||    
T  48599641 acccaagttgctcacaaaagactctc 48599666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 45 - 266
Target Start/End: Complemental strand, 6432031 - 6431808
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| ||||||||||||| ||||||| |||||   |  |||| ||| ||| ||||   ||||||||  |||||||||    
T  6432031 tagcttcaacaagctcacaaagaacaatcctaatttctacccattttcccaatctaacca-atgaacaagacactcatgattttcactctcccaatgtgt 6431933  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| ||||||||||  ||||||||||||||||||| || ||| ||| | |||||||||||||||||||||||| ||||||||    
T  6431932 ttacaattgtttcccaactctagaatctaaccctcaaaagagaaccaacccttagcatttgatttcactaaggatcttctcttttggtttcacaagactc 6431833  T
Q  242 accctagttgctcacaaatgactct 266  Q
    |||| ||||||||||||| ||||||    
T  6431832 acccaagttgctcacaaaagactct 6431808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 4512578 - 4512725
Alignment:
Q  125 tttcactcaaccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctc 222  Q
    ||||||||  |||| |||||| |||||||||| ||||||| |||| ||||| |||||||||||| ||||||| |||||| ||| | ||||||||||||||    
T  4512578 tttcactctcccaaggtgtttacaattgtttcccaactctagaatataacccccaaaagagaactaacccttagcctttgatttcactaaggatcttctc 4512677  T
Q  223 ttttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  4512678 ttttggtttcacaagactcacccaagttgctcacaaatgactctccac 4512725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 135 - 270
Target Start/End: Complemental strand, 2390252 - 2390115
Alignment:
Q  135 ccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttc 232  Q
    |||| |||||| |||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | ||||||||||||||||||||||||    
T  2390252 ccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttc 2390153  T
Q  233 ccaagactcaccctagttgctcacaaatgactctccac 270  Q
     |||||||||||| ||||||||||||| |||| |||||    
T  2390152 acaagactcacccaagttgctcacaaaagactatccac 2390115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 135 - 270
Target Start/End: Original strand, 6360110 - 6360247
Alignment:
Q  135 ccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttc 232  Q
    |||| ||||||  ||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | ||||||||||||||||||| ||||    
T  6360110 ccaaggtgtttaaaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttgatttc 6360209  T
Q  233 ccaagactcaccctagttgctcacaaatgactctccac 270  Q
     |||||||||||| ||||||||||||||||||||||||    
T  6360210 acaagactcacccaagttgctcacaaatgactctccac 6360247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 140 - 270
Target Start/End: Complemental strand, 29608701 - 29608569
Alignment:
Q  140 gtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaag 237  Q
    |||||| |||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | ||||| ||||||| |||||||||| ||||    
T  29608701 gtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagaatcttctattttggtttcacaag 29608602  T
Q  238 actcaccctagttgctcacaaatgactctccac 270  Q
    |||||||| ||||||||||||| ||||||||||    
T  29608601 actcacccaagttgctcacaaaagactctccac 29608569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 45 - 270
Target Start/End: Original strand, 4508814 - 4509041
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctac-cattttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||| ||| || | |||||||| |||||||||||| |||||||| ||||||  |  || | ||| ||| ||||   ||||||||  |||| ||||    
T  4508814 tagcttcaataagctcacaaagaacaaccctaatttctactcattttcccaatctcacca-atcaacaagacactcatgattttcactctcccaaggtgt 4508912  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| ||||||||||   ||||||||||||| |||| |||||| ||| | ||||||||||| |||||||||||| ||||||||    
T  4508913 ttacaattgtttcccaactctagaatctaacccataaaagagaaccaatccttagcctttgatttcactaaggatcttatcttttggtttcacaagactc 4509012  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    |||  ||||||||||||||||||||||||    
T  4509013 accaaagttgctcacaaatgactctccac 4509041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 4510736 - 4510883
Alignment:
Q  125 tttcactcaaccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctc 222  Q
    ||||||||  |||| |||||| |||||||||| ||||||| ||||||||||   ||||||||||||| | || |||||| ||| | ||||||||||||||    
T  4510736 tttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccataaaagagaaccaatcgttagcctttgatttcactaaggatcttctc 4510835  T
Q  223 ttttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    |||||||||| |||||||||||  ||||||||||||||||||||||||    
T  4510836 ttttggtttcacaagactcaccaaagttgctcacaaatgactctccac 4510883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 270
Target Start/End: Complemental strand, 3258964 - 3258829
Alignment:
Q  135 ccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcc 233  Q
    |||| |||||| |||||||||| ||||||| |||||||||| ||||| |||||||||||||| |  ||| ||| |||||||||||||||||||||||||     
T  3258964 ccaaggtgtttacaattgtttcccaactctagaatctaacccccaaatgagaaccaacccttagg-tttgatttcctaaggatcttctcttttggtttca 3258866  T
Q  234 caagactcaccctagttgctcacaaatgactctccac 270  Q
    |||||||||||| ||||||| | ||| ||||||||||    
T  3258865 caagactcacccaagttgctaataaaagactctccac 3258829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 47 - 259
Target Start/End: Original strand, 1360263 - 1360478
Alignment:
Q  47 gcttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgttt- 145  Q
    |||||||||||||||||||||  |||||||||||||||| |||||| |||||| |  ||||| ||| | | ||| |||||||||||| | || ||||||     
T  1360263 gcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcactcaccaaaggtgtttc 1360362  T
Q  146 gcaattgtttctcaactct-gaatctaa-cctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcac 243  Q
     ||||||||| |||||||| |||||||| || ||||||||||||||| || |  ||||| ||| || ||  || |||||||||||||| |||||||||||    
T  1360363 ccaattgtttttcaactctagaatctaaccccccaaaagagaaccaatccatatcctttgatttcccaaaaatattctcttttggttttccaagactcac 1360462  T
Q  244 cctagttgctcacaaa 259  Q
     | |||||||| ||||    
T  1360463 tcaagttgctcgcaaa 1360478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 140 - 267
Target Start/End: Original strand, 22328601 - 22328730
Alignment:
Q  140 gtgtttgcaattgtttctcaactct-gaatctaacctcc-aaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaag 237  Q
    |||||| |||||||||| ||||| | | |||||||| || |||||||||||||||||| || ||| ||||| ||||||| ||||||||| ||||||||||    
T  22328601 gtgtttacaattgtttcccaactttaggatctaaccccccaaaagagaaccaacccttagcttttgattacataaggatattctcttttagtttcccaag 22328700  T
Q  238 actcaccctagttgctcacaaatgactctc 267  Q
    | |||||| |||||||||||||||||||||    
T  22328701 attcacccaagttgctcacaaatgactctc 22328730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 22270033 - 22269806
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgattt-cactcaaccaatgtg 142  Q
    ||||||||||||| || | |||||||| ||||||||||||| ||||||| ||||||  |  |||| ||| ||| ||||  |||| |||||  |||| |||    
T  22270033 tagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcacca-atgaacaagacactcatgaattttcactctcccaaggtg 22269935  T
Q  143 tttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagact 240  Q
    |||  ||||||||| ||||||| |||||||||| |||||||||||||||||| | |||| | ||| | ||||||||||||| |||||||||| |||||||    
T  22269934 tttagaattgtttc-caactctagaatctaacccccaaaagagaaccaacccatagcctatgatttcactaaggatcttctattttggtttcacaagact 22269836  T
Q  241 caccctagttgctcacaaatgactctccac 270  Q
    ||||| |||| ||| |||  ||||||||||    
T  22269835 cacccaagtttctctcaatagactctccac 22269806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 64 - 270
Target Start/End: Original strand, 8359444 - 8359653
Alignment:
Q  64 aagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgtttgcaattgtttctcaact 162  Q
    ||||| || ||||||||||||| ||||||| ||||||| |  |||| ||| ||| ||||   ||||||||   ||| |||||| |||||||||  |||||    
T  8359444 aagaaaaaccctaatttctacccattttcccaatctcccca-atgaacaagacactcatgattttcactctctcaaggtgtttacaattgttttccaact 8359542  T
Q  163 ct-gaatctaa-cctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaa 259  Q
    |  |||||||| || |||||| | ||||||| ||| |||||| ||| | |||||||| ||||||||||||||| ||||||||| || |||||||||||||    
T  8359543 caagaatctaaacccccaaaaaataaccaactcttagcctttgatttcactaaggattttctcttttggtttcacaagactcatccaagttgctcacaaa 8359642  T
Q  260 tgactctccac 270  Q
     ||||||||||    
T  8359643 agactctccac 8359653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 43363586 - 43363629
Alignment:
Q  49 ttcaacaagttctccaagaacaaacctaatttctaccattttcc 92  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  43363586 ttcaacaagctctccaagaacaaacctaatttctaccattttcc 43363629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 43363667 - 43363737
Alignment:
Q  188 caacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaa 258  Q
    |||||||| || ||||||| ||||| |||||||||||||||| || ||||| |||||| | ||||||||||    
T  43363667 caacccttagcatttaatttcctaaagatcttctcttttggtctctcaagattcacccaaattgctcacaa 43363737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 5116540 - 5116475
Alignment:
Q  198 cctttaattacctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaatgac 263  Q
    ||||| ||| ||| ||||||||||||||||||| |||||||||||||  ||||  |||||||||||    
T  5116540 cctttgatttcctgaggatcttctcttttggttacccaagactcacctaagtttatcacaaatgac 5116475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 145
Target Start/End: Complemental strand, 5116661 - 5116564
Alignment:
Q  48 cttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgttt 145  Q
    |||||||||  | ||||||||||||||||||||||||  |||||| ||||||||| ||| | ||| | | ||| ||||||||| |  |||||||||||    
T  5116661 cttcaacaaactatccaagaacaaacctaatttctactcttttcctaatctcctcccataaacaagagactcaatgatttcacccgcccaatgtgttt 5116564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 23555100 - 23555055
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccatttt 90  Q
    |||||||||||||||| | |||||||| ||||||||||||||||||    
T  23555100 tagcttcaacaagttcacaaagaacaaccctaatttctaccatttt 23555055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 4586221 - 4586166
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttcta-ccattttccaaatctc 99  Q
    |||||||||||||||| | |||||||| ||||||||||| ||||||||| ||||||    
T  4586221 tagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctc 4586166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 27347877 - 27347822
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttcta-ccattttccaaatctc 99  Q
    |||||||||||||||| | |||||||| ||||||||||| ||||||||| ||||||    
T  27347877 tagcttcaacaagttcacaaagaacaatcctaatttctacccattttcccaatctc 27347822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 48489491 - 48489436
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttcta-ccattttccaaatctc 99  Q
    ||||||||||||||| || |||||||| ||||||||||| ||||||||| ||||||    
T  48489491 tagcttcaacaagttttcaaagaacaaccctaatttctacccattttcccaatctc 48489436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 48491639 - 48491584
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttcta-ccattttccaaatctc 99  Q
    |||||||||||||||| | |||||||| ||||||||||| ||||||||| ||||||    
T  48491639 tagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctc 48491584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 3904751 - 3904844
Alignment:
Q  70 aaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgtttgcaattgtttctcaactc 163  Q
    ||||||||||||||||||||||| |||||| ||  | || ||| | | ||| |||||||||||  |||| |||||| ||| ||||||| |||||    
T  3904751 aaacctaatttctaccattttcccaatctcttcctaagaacaagagactcaatgatttcactcgcccaaggtgtttacaaatgtttcttaactc 3904844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 26639375 - 26639334
Alignment:
Q  50 tcaacaagttctccaagaacaaacctaatttctaccattttc 91  Q
    |||||||  |||||||||||| ||||||||||||||||||||    
T  26639375 tcaacaaactctccaagaacatacctaatttctaccattttc 26639334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 22552683 - 22552743
Alignment:
Q  185 aaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccc 245  Q
    |||||||||||  ||||| ||| |||| | ||||||||||||||| |||||||| ||||||    
T  22552683 aaccaacccttatcctttgatttcctatgaatcttctcttttggtctcccaagattcaccc 22552743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 43864304 - 43864264
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc 85  Q
    |||||||||||||||| | |||||||| |||||||||||||    
T  43864304 tagcttcaacaagttcacaaagaacaaccctaatttctacc 43864264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 47674051 - 47674091
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc 85  Q
    |||||||||||||||| | |||||||| |||||||||||||    
T  47674051 tagcttcaacaagttcacaaagaacaaccctaatttctacc 47674091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 45 - 270
Target Start/End: Original strand, 1631840 - 1632067
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| ||||||||||||| ||||| | ||||||  |  |||| ||| ||| ||||   ||||||||   ||| ||||    
T  1631840 tagcttcaacaagctcacaaagaacaatcctaatttctacccatttttccaatctcacca-atgaacaagacactcatgattttcactctctcaaggtgt 1631938  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | |||||||||||||||||||||||| ||||||||    
T  1631939 ttacaattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacaagactc 1632038  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    |||| ||||||||||||| ||||||||||    
T  1632039 acccaagttgctcacaaaagactctccac 1632067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 49 - 270
Target Start/End: Original strand, 35446996 - 35447219
Alignment:
Q  49 ttcaacaagttctccaagaacaaacctaatttctacca-ttttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgtttgc 147  Q
    ||||||||| || | |||||||| |||||||||||||| |||| | ||||||  |  |||| ||| ||| ||||   ||||||||  |||| |||||| |    
T  35446996 ttcaacaagatcacaaagaacaaccctaatttctaccaattttaccaatctcacca-atgaacaagacactcatgattttcactctcccaaggtgtttac 35447094  T
Q  148 aattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactcaccc 245  Q
    ||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||| ||| | ||||| |||||||||||||||||  ||||||||||||    
T  35447095 aattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaagtatcttctcttttggttttacaagactcaccc 35447194  T
Q  246 tagttgctcacaaatgactctccac 270  Q
     ||||||||||||| ||||||||||    
T  35447195 aagttgctcacaaaagactctccac 35447219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 45726989 - 45726762
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | ||||||||  |||||||||||| ||||||| ||||||  |  ||||  || ||| ||||   ||||||||  |||| ||||    
T  45726989 tagcttcaacaagctcacaaagaacaactctaatttctacccattttcccaatctcacca-atgaataagacactcatgattttcactctcccaaggtgt 45726891  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || ||||||||||  ||| || |||||||||| |||||||||||||||||||| |||||| ||| | |||||||||||||||||||||||| || |||||    
T  45726890 ttacaattgtttcctaaccctagaatctaacccccaaaagagaaccaacccttagcctttgatttcactaaggatcttctcttttggtttcacatgactc 45726791  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    |||| ||||||||||||||||||||||||    
T  45726790 acccaagttgctcacaaatgactctccac 45726762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 42288298 - 42288445
Alignment:
Q  125 tttcactcaaccaatgtgtttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctc 222  Q
    ||||||||  |||| |||||| |||||||||| ||||||| |||||||| | | |||||||||||||||||| |||||| ||| | ||||||||||||||    
T  42288298 tttcactctcccaaggtgtttacaattgtttcccaactctagaatctaaacccgaaaagagaaccaacccttagcctttgatttcactaaggatcttctc 42288397  T
Q  223 ttttggtttcccaagactcaccctagttgctcacaaatgactctccac 270  Q
    |||||||||| |||||||||||| ||||||||||||| ||||||||||    
T  42288398 ttttggtttcacaagactcacccaagttgctcacaaaagactctccac 42288445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 45 - 265
Target Start/End: Complemental strand, 17450651 - 17450429
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttcta-ccattttccaaatctcctctcatgagcaaaacattcattga-tttcactcaaccaatgtg 142  Q
    ||||||||||||| || | |||||||| |||||| |||| ||||||| ||||||| | |  |||| ||| ||| ||| ||| ||||||||| |||| |||    
T  17450651 tagcttcaacaagctcacaaagaacaagcctaatctctacccatttttcaaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtg 17450553  T
Q  143 tttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactc 241  Q
    ||||||| |||||  ||||||| ||||| |||| |||| |||||| |||||||| |||||| ||| ||||| ||||||||||||||||||| ||||||||    
T  17450552 tttgcaaatgtttgccaactctagaatccaacccccaatagagaatcaacccttagcctttgatttcctaatgatcttctcttttggtttcacaagactc 17450453  T
Q  242 accctagttgctcacaaatgactc 265  Q
    |||| |||| ||||||| ||||||    
T  17450452 acccaagtttctcacaattgactc 17450429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 140 - 270
Target Start/End: Complemental strand, 24398018 - 24397891
Alignment:
Q  140 gtgtttgcaattgtttctcaactctg-aatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaaga 238  Q
    |||||| |||||||||| |||||||  ||||||||| |||||   |||||||||||| || || | || | ||||||| ||||||||||||||| |||||    
T  24398018 gtgtttacaattgtttcccaactctataatctaacccccaaa---gaaccaacccttagctttgactttc-taaggatattctcttttggtttcacaaga 24397923  T
Q  239 ctcaccctagttgctcacaaatgactctccac 270  Q
    || |||| | ||| ||||||||||||||||||    
T  24397922 ctaacccaaattggtcacaaatgactctccac 24397891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 42261594 - 42261651
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcctc 102  Q
    ||||||||||||| ||||||||||||||| |||||||||| ||||||  |||||||||    
T  42261594 tagcttcaacaagctctccaagaacaaacttaatttctacgattttctcaatctcctc 42261651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 267
Target Start/End: Complemental strand, 33648231 - 33648006
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacc-taatttctaccattttccaaatctcctctcatgagcaaaacattc-attgatttcactcaaccaatgtg 142  Q
    ||||||||||||| || | ||||||||||| |||||| ||||||||||  ||||||||||||||  ||| ||| || |||  ||||||||  ||||  ||    
T  33648231 tagcttcaacaagctcacaaagaacaaaccctaatttttaccattttctcaatctcctctcatgtacaagacactcaattattttcactctcccaagatg 33648132  T
Q  143 -tttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagact 240  Q
     ||| |  || | || ||||||| |||||||||| |||||||| ||  ||||||| || || | || ||||||||||||||||||||||||   ||||||    
T  33648131 ttttacggttatgtcccaactctagaatctaacccccaaaagataattaaccctt-gctttgatttccctaaggatcttctcttttggttttataagact 33648033  T
Q  241 caccctagttgctcacaaatgactctc 267  Q
    | ||  ||| ||| |||||||||||||    
T  33648032 cgcctaagtagctaacaaatgactctc 33648006  T

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Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 6595114 - 6595159
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccatttt 90  Q
    |||||||||||||||| | |||||||| ||||||||||||||||||    
T  6595114 tagcttcaacaagttcacaaagaacaaccctaatttctaccatttt 6595159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 30218153 - 30218236
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgatttc 128  Q
    ||||||||| ||| ||||||||||||||||||| |||||||  ||||  ||||||||  ||||| ||| ||| ||| |||||||    
T  30218153 tagcttcaataagctctccaagaacaaacctaacttctacccatttctcaatctccttccatgaacaagacactcaatgatttc 30218236  T

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Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 43731074 - 43730992
Alignment:
Q  176 ccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaa 259  Q
    |||||||| |||||||| || | |||| ||| |||| |||| |||| |||||||||||||||| |||||| | |||||||||||    
T  43731074 ccaaaaga-aaccaacctttagactttgatttcctacggatattctattttggtttcccaagattcacccaaattgctcacaaa 43730992  T

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Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 259
Target Start/End: Original strand, 30218269 - 30218358
Alignment:
Q  169 ctaacctccaaaagagaaccaacccttggcctttaattacctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaa 259  Q
    |||||| |||||||||||||||   || || ||| ||| ||||||||||  | ||||||||||| |||||||||| | |||||||||||||    
T  30218269 ctaacccccaaaagagaaccaatatttagcttttgatttcctaaggatcccc-cttttggtttcgcaagactcactcaagttgctcacaaa 30218358  T

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Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 41446199 - 41446154
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccatttt 90  Q
    ||||||||||||| |||| |||||||||| ||||||||||| ||||    
T  41446199 tagcttcaacaagctctcaaagaacaaacataatttctaccttttt 41446154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 41454294 - 41454249
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccatttt 90  Q
    ||||||||||||| |||| || |||||| |||||||||||||||||    
T  41454294 tagcttcaacaagctctcaaaaaacaaatctaatttctaccatttt 41454249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 45 - 268
Target Start/End: Original strand, 80391 - 80616
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| ||||||||||||| ||||||| ||||||  |  |||| ||| ||| ||||   ||||||||  |||| ||||    
T  80391 tagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcagca-atgaacaagacactcatgattttcactctcccaaggtgt 80489  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    |  ||||||||||  |||||| |||||||||| |||||| ||||||||||||| |||||| ||| | |||||||||| ||||||| ||||||||||||||    
T  80490 tcacaattgtttcctaactctagaatctaacccccaaaatagaaccaacccttagcctttgatttcactaaggatctactcttttagtttcccaagactc 80589  T
Q  242 accctagttgctcacaaatgactctcc 268  Q
    |||| ||||||||||||| ||||||||    
T  80590 acccaagttgctcacaaaagactctcc 80616  T

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Target: scaffold0466 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 270
Target Start/End: Complemental strand, 7387 - 7161
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacc-attttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | |||||||| | ||||||||||| ||||| | ||||||  |  |||| ||| ||| ||||   ||||||||  |||| ||||    
T  7387 tagcttcaacaagctcacaaagaacaaccttaatttctacccatttttccaatctcacca-atgaacaagacactcatgattttcactctcccaaggtgt 7289  T
Q  144 ttgcaattgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| || |||| |||||||||| |||||||||||||||||||| |||||| |||   |||||||||||||||||||||||| ||||||||    
T  7288 ttacaattgtttc-cagctctagaatctaacccccaaaagagaaccaacccttagcctttgattttactaaggatcttctcttttggtttcacaagactc 7190  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    |||| ||||||||||||| ||||||||||    
T  7189 acccaagttgctcacaaaagactctccac 7161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 53 - 270
Target Start/End: Complemental strand, 11609 - 11391
Alignment:
Q  53 acaagttctccaagaacaaacctaatttctaccatttt-ccaaatctcctctcatgagcaaaacattcattgattt-cactcaaccaatgtgtttgcaat 150  Q
    |||||||| | |||||||| |||||||||||||||||| || ||||||  |  |||| ||| ||| ||| |||||| |||||| |||| |||||| ||||    
T  11609 acaagttcacaaagaacaaccctaatttctaccatttttcccaatctcacca-atgaacaagacactcaatgattttcactca-ccaaggtgtttacaat 11512  T
Q  151 tgtttctcaactct-gaatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactcaccctag 248  Q
     ||||| ||||||| |||||||||| | ||||||||| ||||| || |||||| |||   |||| ||||||||||||||||||| |||||||||||| ||    
T  11511 -gtttcccaactctagaatctaaccccaaaaagagaaacaacctttagcctttgattttactaatgatcttctcttttggtttcacaagactcacccaag 11413  T
Q  249 ttgctcacaaatgactctccac 270  Q
    ||||||| ||||||||||||||    
T  11412 ttgctcagaaatgactctccac 11391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 45 - 270
Target Start/End: Original strand, 18111 - 18336
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctacca-ttttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgt 143  Q
    ||||||||||||| || | | |||||| |||||||||||||| |||||| | ||||  |  |||| ||||||| ||||   ||||||||  |||| ||||    
T  18111 tagcttcaacaagctcacaatgaacaaccctaatttctaccaattttcccactctcacca-atgaacaaaacactcatgattttcactctcccaaagtgt 18209  T
Q  144 ttgcaattgtttctcaactctg-aatctaacctccaaaagagaaccaacccttggcctttaattac-ctaaggatcttctcttttggtttcccaagactc 241  Q
    || |||||||||| |||||||  ||||||||| |||||||||||||||| ||| | |||| ||| | |||||||||||||||||||||||  ||||||||    
T  18210 ttacaattgtttc-caactctataatctaacc-ccaaaagagaaccaactcttagtctttgatttcactaaggatcttctcttttggttttacaagactc 18307  T
Q  242 accctagttgctcacaaatgactctccac 270  Q
    || | |||||||||||||| |||||||||    
T  18308 actcaagttgctcacaaataactctccac 18336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 490429 - 490486
Alignment:
Q  45 tagcttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcctc 102  Q
    ||||||||||||| ||||||||||||||| |||||||||| ||||||  |||||||||    
T  490429 tagcttcaacaagctctccaagaacaaacttaatttctacgattttctcaatctcctc 490486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 267
Target Start/End: Original strand, 1679 - 1737
Alignment:
Q  208 cctaaggatcttctcttttggtttcccaagactcaccctagttgctcacaaatgactctc 267  Q
    |||||||||||||||||||| | ||||||||||| ||| |||||||||| ||||||||||    
T  1679 cctaaggatcttctcttttgatctcccaagactcgcccaagttgctcac-aatgactctc 1737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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