View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12579_high_19 (Length: 313)
Name: NF12579_high_19
Description: NF12579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12579_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 14 - 306
Target Start/End: Original strand, 36872545 - 36872837
Alignment:
| Q |
14 |
cataaatatattttatagctgggaacattgttgttaagattgcgagttagattttaggattggacattacaaccattacgaaaactaactcacatgtaaa |
113 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |
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| T |
36872545 |
cataaatatattttatagctgggaacgttgttgttaagattgcgagttagattttaggattggacattacgaccattgggaaaactaactcacatgtaaa |
36872644 |
T |
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| Q |
114 |
atcagactctgaaaccagtcttttgactcatttttacccaagaaattactcattctcatacaagacactaattttctcgatatctatgggcctctctccc |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
36872645 |
atcagactctgaaaccagtcttttgactcatttttacccaagaaattactcattctcatacaagacactaattttctcgatatctatgagcctctctccc |
36872744 |
T |
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| Q |
214 |
cttcagcaattactactctgcctttcaacctctctgctgttgagttgtattgatctctcccaagaatctctccactttgtgtgttctctgctt |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36872745 |
cttcagcaattactactctgcctttcaacctctctgctgttgagttgtattgatctctcccaagaatctctccactttgtgtgttctctgctt |
36872837 |
T |
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