View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12579_low_42 (Length: 269)

Name: NF12579_low_42
Description: NF12579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12579_low_42
NF12579_low_42
[»] chr1 (28 HSPs)
chr1 (1-263)||(21037939-21038201)
chr1 (155-224)||(25361896-25361965)
chr1 (149-224)||(44482234-44482309)
chr1 (148-224)||(34371717-34371792)
chr1 (152-207)||(7918208-7918263)
chr1 (148-207)||(20157347-20157406)
chr1 (128-207)||(40285651-40285730)
chr1 (146-204)||(52903250-52903308)
chr1 (148-221)||(5376483-5376556)
chr1 (148-224)||(9629880-9629956)
chr1 (152-224)||(9828051-9828123)
chr1 (148-220)||(17754314-17754386)
chr1 (151-207)||(34712380-34712436)
chr1 (148-203)||(38503323-38503378)
chr1 (153-204)||(39130767-39130818)
chr1 (153-224)||(47989505-47989576)
chr1 (148-220)||(17831518-17831587)
chr1 (148-202)||(26238115-26238168)
chr1 (120-185)||(2896140-2896205)
chr1 (130-207)||(6427335-6427412)
chr1 (147-224)||(23804430-23804507)
chr1 (119-192)||(28674774-28674847)
chr1 (130-223)||(36905982-36906075)
chr1 (148-208)||(48148033-48148094)
chr1 (148-204)||(19637771-19637827)
chr1 (131-187)||(37055873-37055929)
chr1 (156-196)||(41500714-41500754)
chr1 (156-196)||(41510892-41510932)
[»] chr3 (21 HSPs)
chr3 (148-219)||(8039820-8039891)
chr3 (153-191)||(25892468-25892506)
chr3 (148-204)||(8383260-8383316)
chr3 (152-224)||(14209120-14209192)
chr3 (152-224)||(14216899-14216971)
chr3 (152-224)||(14223028-14223100)
chr3 (149-224)||(15812803-15812876)
chr3 (148-204)||(49505154-49505210)
chr3 (153-224)||(16789020-16789091)
chr3 (128-219)||(17005604-17005695)
chr3 (126-193)||(29508425-29508492)
chr3 (153-191)||(1830351-1830389)
chr3 (153-203)||(20691327-20691377)
chr3 (146-192)||(21419467-21419513)
chr3 (153-203)||(40150572-40150622)
chr3 (148-185)||(4466619-4466656)
chr3 (145-186)||(4469850-4469891)
chr3 (160-221)||(29386494-29386555)
chr3 (148-204)||(7928453-7928509)
chr3 (151-207)||(11313797-11313853)
chr3 (148-224)||(16192730-16192806)
[»] chr7 (25 HSPs)
chr7 (125-224)||(32308100-32308199)
chr7 (152-207)||(18013071-18013126)
chr7 (148-192)||(5235989-5236033)
chr7 (153-204)||(4909159-4909210)
chr7 (148-207)||(5548679-5548738)
chr7 (153-215)||(23128650-23128712)
chr7 (148-202)||(27093415-27093469)
chr7 (148-202)||(27184832-27184886)
chr7 (148-193)||(8160419-8160464)
chr7 (146-202)||(17851432-17851488)
chr7 (153-193)||(27732250-27732290)
chr7 (152-207)||(7758329-7758384)
chr7 (120-187)||(13770666-13770733)
chr7 (146-207)||(7328688-7328749)
chr7 (151-204)||(21568622-21568675)
chr7 (150-187)||(21880157-21880194)
chr7 (151-224)||(24339648-24339721)
chr7 (152-220)||(6630896-6630964)
chr7 (153-193)||(8239061-8239101)
chr7 (153-193)||(10377515-10377555)
chr7 (153-193)||(12278843-12278883)
chr7 (148-204)||(20549794-20549850)
chr7 (152-184)||(21141002-21141034)
chr7 (151-187)||(30813818-30813854)
chr7 (175-219)||(41811668-41811712)
[»] chr5 (20 HSPs)
chr5 (118-193)||(15410459-15410534)
chr5 (150-217)||(2236772-2236839)
chr5 (148-220)||(3966506-3966578)
chr5 (148-220)||(18592076-18592148)
chr5 (148-204)||(32630735-32630791)
chr5 (148-208)||(36838546-36838606)
chr5 (130-224)||(39698526-39698620)
chr5 (125-193)||(33035812-33035880)
chr5 (148-187)||(27932238-27932277)
chr5 (150-203)||(12927659-12927712)
chr5 (123-224)||(19579679-19579780)
chr5 (120-193)||(26312744-26312817)
chr5 (148-193)||(34879353-34879398)
chr5 (153-220)||(2419865-2419930)
chr5 (148-204)||(2548390-2548446)
chr5 (151-207)||(6471886-6471942)
chr5 (153-193)||(19293434-19293474)
chr5 (152-224)||(21542037-21542109)
chr5 (148-204)||(30502388-30502444)
chr5 (148-204)||(30542731-30542787)
[»] chr2 (22 HSPs)
chr2 (148-220)||(24975309-24975381)
chr2 (148-224)||(44860323-44860399)
chr2 (149-220)||(18889575-18889646)
chr2 (148-216)||(31456629-31456697)
chr2 (126-202)||(31808058-31808134)
chr2 (146-204)||(34691805-34691863)
chr2 (146-204)||(34714217-34714275)
chr2 (171-224)||(35056894-35056947)
chr2 (148-204)||(18570975-18571031)
chr2 (145-221)||(36281685-36281761)
chr2 (120-187)||(21091698-21091765)
chr2 (153-204)||(23406876-23406927)
chr2 (155-193)||(17520081-17520119)
chr2 (153-191)||(25544489-25544527)
chr2 (146-223)||(6045897-6045974)
chr2 (146-207)||(15909629-15909690)
chr2 (148-193)||(21616765-21616810)
chr2 (146-187)||(23921254-23921295)
chr2 (153-193)||(4229419-4229459)
chr2 (223-263)||(27084344-27084384)
chr2 (131-207)||(29970546-29970622)
chr2 (148-192)||(31026698-31026742)
[»] scaffold0136 (1 HSPs)
scaffold0136 (153-224)||(3829-3900)
[»] chr6 (23 HSPs)
chr6 (151-204)||(7996378-7996431)
chr6 (151-204)||(8022370-8022423)
chr6 (116-192)||(9658850-9658926)
chr6 (130-204)||(7265593-7265667)
chr6 (146-224)||(10294108-10294186)
chr6 (153-203)||(34895035-34895085)
chr6 (146-187)||(24614411-24614452)
chr6 (155-207)||(9024173-9024225)
chr6 (151-207)||(9025491-9025547)
chr6 (148-204)||(19040355-19040411)
chr6 (152-187)||(8389489-8389524)
chr6 (155-202)||(13364707-13364754)
chr6 (120-187)||(31579242-31579309)
chr6 (148-187)||(32511683-32511722)
chr6 (153-191)||(19602194-19602232)
chr6 (174-220)||(28862151-28862197)
chr6 (148-193)||(1532243-1532288)
chr6 (156-224)||(10339105-10339174)
chr6 (150-207)||(34073344-34073401)
chr6 (151-187)||(2224232-2224268)
chr6 (148-220)||(9629386-9629458)
chr6 (151-207)||(12696330-12696386)
chr6 (120-220)||(16766672-16766772)
[»] chr4 (17 HSPs)
chr4 (118-191)||(7424643-7424716)
chr4 (117-193)||(22440611-22440687)
chr4 (152-192)||(37698719-37698759)
chr4 (148-207)||(18513238-18513297)
chr4 (117-224)||(30838182-30838289)
chr4 (225-263)||(5922535-5922573)
chr4 (148-178)||(43240997-43241027)
chr4 (148-198)||(56488516-56488566)
chr4 (149-222)||(847955-848028)
chr4 (152-205)||(6933282-6933335)
chr4 (151-207)||(56257939-56257993)
chr4 (148-224)||(903925-904001)
chr4 (153-193)||(1213232-1213271)
chr4 (148-224)||(30982858-30982934)
chr4 (153-220)||(31243532-31243599)
chr4 (151-207)||(35952614-35952670)
chr4 (153-193)||(55941014-55941054)
[»] scaffold0049 (2 HSPs)
scaffold0049 (155-207)||(56932-56984)
scaffold0049 (143-183)||(63771-63811)
[»] scaffold0036 (1 HSPs)
scaffold0036 (152-224)||(9727-9799)
[»] chr8 (18 HSPs)
chr8 (132-224)||(11803246-11803338)
chr8 (148-192)||(14634153-14634197)
chr8 (151-193)||(12559117-12559159)
chr8 (148-224)||(24362181-24362258)
chr8 (152-224)||(15816109-15816181)
chr8 (153-204)||(4786338-4786389)
chr8 (153-224)||(11927066-11927137)
chr8 (153-203)||(29198480-29198530)
chr8 (151-204)||(3025557-3025610)
chr8 (148-193)||(4611537-4611582)
chr8 (152-197)||(13203648-13203693)
chr8 (163-224)||(26902155-26902216)
chr8 (148-193)||(34897088-34897133)
chr8 (152-192)||(7658470-7658510)
chr8 (153-193)||(9936822-9936862)
chr8 (151-203)||(12606830-12606882)
chr8 (155-191)||(26507450-26507486)
chr8 (148-208)||(33382015-33382075)
[»] scaffold1528 (1 HSPs)
scaffold1528 (148-225)||(1038-1115)
[»] scaffold0008 (1 HSPs)
scaffold0008 (151-224)||(263352-263425)
[»] scaffold0020 (2 HSPs)
scaffold0020 (154-221)||(137789-137856)
scaffold0020 (151-207)||(135309-135365)
[»] scaffold0004 (1 HSPs)
scaffold0004 (148-187)||(92810-92849)
[»] scaffold0044 (1 HSPs)
scaffold0044 (146-224)||(53181-53259)
[»] scaffold0011 (1 HSPs)
scaffold0011 (153-203)||(240022-240072)
[»] scaffold0188 (1 HSPs)
scaffold0188 (120-169)||(9515-9564)
[»] scaffold0022 (1 HSPs)
scaffold0022 (131-192)||(90829-90890)
[»] scaffold0123 (1 HSPs)
scaffold0123 (148-220)||(44509-44581)
[»] scaffold0024 (1 HSPs)
scaffold0024 (121-205)||(68241-68325)


Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 21037939 - 21038201
Alignment:
Q  1 tcagaatcaagaaagaattacaacatcagaacccaagaaattcaatttgttttcataagtatgaatttggaagaaaagtggaagatataaaagttgaatg 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  21037939 tcagaatcaagaaagaattactacatcagaacccaagaaattcaatttgttttcataagtatgaatttggaagaaaagtggaagatataaaagttgaata 21038038  T
Q  101 aatcacatatatggccacagacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagt 200  Q
    || ||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21038039 aaccacatatatgaacacagacacaacatggacacttatacactaataccgctaataatttaagaaaattacataattcagtgtaatcatatgcgtcagt 21038138  T
Q  201 gtcgtgttcgtgtcggacacgacaacactgagacacgcctaatctgatgagtgtctctgcttc 263  Q
    |||||||  |||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  21038139 gtcgtgtcggtgtcggacacgacgacactgagacacgcctaatctgatgagtgtctgtgcttc 21038201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 25361896 - 25361965
Alignment:
Q  155 ataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    ||||||| ||||||| | ||||||||||||||| ||||| |||||||||||||  |||||||||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacgaca 25361965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 44482234 - 44482309
Alignment:
Q  149 ccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    ||||| ||||||| ||||||| | ||||||||||||||| ||||| ||| |||||||||  |||||||||||||||    
T  44482234 ccgcttataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgaca 44482309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 34371717 - 34371792
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    ||||||||||||| | |||||| | ||||||||||||||| ||||| ||| |||||||||| |||||||| ||||||    
T  34371717 accgctaataattga-gaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcggatacgaca 34371792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 7918263 - 7918208
Alignment:
Q  152 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    |||||||||| ||||||| | ||||||||||||||| ||||| |||||||||||||    
T  7918263 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgt 7918208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 20157406 - 20157347
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    |||||||||||| | ||||||| | ||||||||||||||||||||| ||| |||||||||    
T  20157406 accgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgt 20157347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 40285730 - 40285651
Alignment:
Q  128 atggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    ||||||||||| |||| || |||||||||||||| |||||||   ||||||||||||| ||||||| |||  ||||||||    
T  40285730 atggacactgacacaccaacaccgctaataatttgagaaaatcgcataattcagtgtagtcatatgtgtcgatgtcgtgt 40285651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 52903250 - 52903308
Alignment:
Q  146 ataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    |||||| ||||||||||| ||||| ||||||||||||||||| ||||| ||| ||||||    
T  52903250 ataccgttaataatttaataaaatcatataattcagtgtaattatatgtgtcggtgtcg 52903308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 5376556 - 5376483
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacg 221  Q
    |||||||||||||||||||||| | ||||||||||||||| | | | ||| |||||||||   |||||||||||    
T  5376556 accgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcgtgtcgatgtcggacacg 5376483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 9629956 - 9629880
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    |||||||||||||| | ||||| |||||||||||||| || ||| | ||| |||||||||   ||||||||||||||    
T  9629956 accgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcgtgtcgatgtcggacacgaca 9629880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 9828051 - 9828123
Alignment:
Q  152 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    |||||||||| | ||||| | |||||||||||||||  |||| ||| ||||||||| |||||| |||||||||    
T  9828051 ctaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgaca 9828123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 17754314 - 17754386
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 220  Q
    |||||||||||||| | ||||||| ||||||||||||||  ||||| |||||||| ||||  |||| ||||||    
T  17754314 accgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacac 17754386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 34712436 - 34712380
Alignment:
Q  151 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    ||||||||||| ||||||| | |||||| |||||||| ||||| |||||||||||||    
T  34712436 gctaataatttgagaaaataacataatttagtgtaattatatgtgtcagtgtcgtgt 34712380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 38503323 - 38503378
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtc 203  Q
    |||||||||||||| ||||||| ||||| ||||||||||| ||||| ||| |||||    
T  38503323 accgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtc 38503378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 39130818 - 39130767
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    ||||||||| |||||||||||||||| |||||||| ||||| ||| ||||||    
T  39130818 taataattttagaaaattatataatttagtgtaattatatgtgtcggtgtcg 39130767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 47989505 - 47989576
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    ||||||||||| ||||| | ||||||||||||||| | | | ||| |||||||||  |||||||||||||||    
T  47989505 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgaca 47989576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 17831587 - 17831518
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 220  Q
    |||||||||||||| ||||||| | || |||||||||||||||||| |||   |||||||  |||||||||||    
T  17831587 accgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtc---gtcgtgtcagtgtcggacac 17831518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 26238168 - 26238115
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgt 202  Q
    |||||||||||||| ||||||| | ||||||||||||||| ||||| ||||||||    
T  26238168 accgctaataatttgagaaaataacataattcagtgtaat-atatgtgtcagtgt 26238115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 2896205 - 2896140
Alignment:
Q  120 gacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgta 185  Q
    ||||||||| ||||||||| || |  | |||||||||||||| ||||||| | |||||||||||||    
T  2896205 gacacaacacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 207
Target Start/End: Original strand, 6427335 - 6427412
Alignment:
Q  130 ggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    ||||||||| || | || |||||||||||||| ||||||| | |||||||| |||||| ||||| ||  |||||||||    
T  6427335 ggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgt 6427412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 23804430 - 23804507
Alignment:
Q  147 taccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    ||||| ||||||||| | |||||||||||||| | |||||| ||||| |||| ||| ||| | |||||||| ||||||    
T  23804430 taccgttaataatttgataaaattatataatttaatgtaattatatgtgtcattgttgtgctggtgtcggatacgaca 23804507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 28674774 - 28674847
Alignment:
Q  119 agacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatat 192  Q
    ||||||||||| ||| | || || |||| |||| ||||||||| ||||||||| |||||||||| |||| ||||    
T  28674774 agacacaacatagacgccgacacgctaacaccgttaataatttgagaaaattacataattcagtataattatat 28674847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 223
Target Start/End: Original strand, 36905982 - 36906075
Alignment:
Q  130 ggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgac 223  Q
    ||||||||| |||| || |||||||||||| | ||||||| | ||||||||| ||||| ||||| ||  | || ||||  ||||||||||||||    
T  36905982 ggacactgacacaccaacaccgctaataatctgagaaaatcacataattcagagtaattatatgtgttggcgttgtgtcagtgtcggacacgac 36906075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 48148094 - 48148033
Alignment:
Q  148 accgctaataattt-aagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgtt 208  Q
    |||||||||||||| || ||||| ||||||||||||||||| ||||  ||| ||||||||||    
T  48148094 accgctaataattttaaaaaaatcatataattcagtgtaattatatatgtcggtgtcgtgtt 48148033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 19637771 - 19637827
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    |||| ||||||||||||||||| | || ||||| |||||||||||| ||| ||||||    
T  19637771 accgataataatttaagaaaatgacattattcaatgtaatcatatgtgtcggtgtcg 19637827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 37055929 - 37055873
Alignment:
Q  131 gacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaat 187  Q
    ||||||||||||   |||| ||||||||||| ||||||||| |||||| ||||||||    
T  37055929 gacactgatacatcgatactgctaataatttgagaaaattacataatttagtgtaat 37055873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 41500754 - 41500714
Alignment:
Q  156 taatttaagaaaattatataattcagtgtaatcatatgcgt 196  Q
    |||||||||||||| |||||||| | |||||||||||||||    
T  41500754 taatttaagaaaatgatataattgaatgtaatcatatgcgt 41500714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 41510932 - 41510892
Alignment:
Q  156 taatttaagaaaattatataattcagtgtaatcatatgcgt 196  Q
    |||||||||||||| |||||||| | |||||||||||||||    
T  41510932 taatttaagaaaatgatataattgaatgtaatcatatgcgt 41510892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 8039891 - 8039820
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggaca 219  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||| ||| |||||||||  ||||||||||    
T  8039891 accgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 8039820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 25892468 - 25892506
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcata 191  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  25892468 taataatttaagaaaatgatataattcagtgtaatcata 25892506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 8383260 - 8383316
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    |||||||||||||| ||||||| ||||||||||||||||| ||| | ||| ||||||    
T  8383260 accgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcg 8383316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 14209120 - 14209192
Alignment:
Q  152 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    |||||||||| | ||||| | ||||||||||||||| | | | |||||||||||||  |||||||||||||||    
T  14209120 ctaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgaca 14209192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 14216899 - 14216971
Alignment:
Q  152 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    |||||||||| | || || ||||||||||||||||| | | | ||| |||||||||| |||||||||||||||    
T  14216899 ctaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgaca 14216971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 14223028 - 14223100
Alignment:
Q  152 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    |||||||||| | || || ||||||||||||||||| | | | ||| |||||||||| |||||||||||||||    
T  14223028 ctaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgaca 14223100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 15812876 - 15812803
Alignment:
Q  149 ccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    |||| |||||||| ||||||| | |||| |||||||||| ||||||  | |||||||||| |||||||||||||||    
T  15812876 ccgcaaataatttgagaaaatcacataactcagtgtaattatatgc--cggtgtcgtgttggtgtcggacacgaca 15812803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 49505210 - 49505154
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    |||||||||||||| ||||||| | |||||| |||||||| ||||| ||||||||||    
T  49505210 accgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcg 49505154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 224
Target Start/End: Original strand, 16789020 - 16789091
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    ||||||||||| ||||| ||||||||||||||||| ||| | ||  |||||||||  |||||||||| ||||    
T  16789020 taataatttaaaaaaatcatataattcagtgtaattataagtgttggtgtcgtgtcagtgtcggacatgaca 16789091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 17005695 - 17005604
Alignment:
Q  128 atggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggaca 219  Q
    |||||||||||  ||| || ||| |||||||||| | ||||| ||||||||||||||||| ||| | ||| |||| ||||| ||||| ||||    
T  17005695 atggacactgactcaccaacaccactaataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgttggtgtcagaca 17005604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 29508425 - 29508492
Alignment:
Q  126 acatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    ||||||||| ||| ||||  ||||| |||||||||| | ||||| ||||||||||||||||| |||||    
T  29508425 acatggacattgacacaccgataccactaataatttgaaaaaatcatataattcagtgtaattatatg 29508492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 1830351 - 1830389
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcata 191  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  1830351 taataatttaagaaaatgacataattcagtgtaatcata 1830389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 20691327 - 20691377
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtc 203  Q
    ||||||||| ||||||| | ||||||||||||||||||||| ||| |||||    
T  20691327 taataatttgagaaaatgacataattcagtgtaatcatatgtgtcggtgtc 20691377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 21419513 - 21419467
Alignment:
Q  146 ataccgctaataatttaagaaaattatataattcagtgtaatcatat 192  Q
    |||||| ||||||||||||||||| |||||||||| |||||| ||||    
T  21419513 ataccgttaataatttaagaaaataatataattcaatgtaattatat 21419467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 40150622 - 40150572
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtc 203  Q
    ||||||||| ||||||| |||||||||| |||||||||||| ||| |||||    
T  40150622 taataatttgagaaaatgatataattcaatgtaatcatatgtgtcggtgtc 40150572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 4466656 - 4466619
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgta 185  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  4466656 accggtaataatttaagaaaatcatataattcagtgta 4466619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 4469850 - 4469891
Alignment:
Q  145 aataccgctaataatttaagaaaattatataattcagtgtaa 186  Q
    |||||||| |||||||||||||||| | ||||||||||||||    
T  4469850 aataccgccaataatttaagaaaatcacataattcagtgtaa 4469891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 29386555 - 29386494
Alignment:
Q  160 ttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacg 221  Q
    ||||||||| |  ||||||||||||||||||||| ||| |||||||||  || |||||||||    
T  29386555 ttaagaaaactgcataattcagtgtaatcatatgtgtcggtgtcgtgtaggtatcggacacg 29386494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 7928453 - 7928509
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    |||||||||||||| | ||||| | ||||||||||||||| ||||| ||| ||||||    
T  7928453 accgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7928509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 11313853 - 11313797
Alignment:
Q  151 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    ||||||||||| ||||||| | |||||| |||||||| ||||| || ||||||||||    
T  11313853 gctaataatttgagaaaatcacataatttagtgtaattatatgtgttagtgtcgtgt 11313797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 16192806 - 16192730
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    |||| ||||||||| ||||||| | ||||||||||||||| ||||| ||   ||||||||  ||||| |||||||||    
T  16192806 accgttaataatttgagaaaataacataattcagtgtaattatatgtgttgatgtcgtgtcggtgtcagacacgaca 16192730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 224
Target Start/End: Original strand, 32308100 - 32308199
Alignment:
Q  125 aacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    |||||||||||||| || |  | |||||||||||||| ||||||| | |||||||||||||||  |||| |||||||||||||  |||| ||||||||||    
T  32308100 aacatggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgaca 32308199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 18013126 - 18013071
Alignment:
Q  152 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    |||||||||||| ||||||| ||||||||||||||| ||||| |||||||||||||    
T  18013126 ctaataatttaaaaaaattacataattcagtgtaattatatgtgtcagtgtcgtgt 18013071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 5235989 - 5236033
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatat 192  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||    
T  5235989 accgctaataatttaagaaaattatataatttagtgtaattatat 5236033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 4909159 - 4909210
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    ||||||||| ||||||||| |||||||| |||||||||||| ||||||||||    
T  4909159 taataatttgagaaaattacataattcattgtaatcatatgtgtcagtgtcg 4909210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 5548679 - 5548738
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    |||||| ||||||| ||||||| | ||||||||||||||| ||||| |||||||||||||    
T  5548679 accgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtcgtgt 5548738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 23128712 - 23128650
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcg 215  Q
    ||||||||| ||||||  ||||||||||||||||||||||| ||| |||| ||||| ||||||    
T  23128712 taataatttgagaaaaccatataattcagtgtaatcatatgtgtcggtgttgtgttggtgtcg 23128650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 27093469 - 27093415
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgt 202  Q
    |||||||||||||||||||||| | |||||| |||||||| ||||||||| ||||    
T  27093469 accgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgt 27093415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 27184832 - 27184886
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgt 202  Q
    |||||||||||||||||||||| | |||||| |||||||| ||||||||| ||||    
T  27184832 accgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgt 27184886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 8160419 - 8160464
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    |||||||||||||||||||||||| |||||| |||||||| |||||    
T  8160419 accgctaataatttaagaaaattacataatttagtgtaattatatg 8160464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 17851432 - 17851488
Alignment:
Q  146 ataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgt 202  Q
    |||||||||||||||| ||||||| | ||||||||||||||| ||||| ||| ||||    
T  17851432 ataccgctaataattttagaaaatcacataattcagtgtaattatatgtgtctgtgt 17851488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 27732290 - 27732250
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    ||||||||||||||||||| ||||||||||||||| |||||    
T  27732290 taataatttaagaaaattacataattcagtgtaattatatg 27732250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 7758329 - 7758384
Alignment:
Q  152 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    |||||||||| |||||||||||||||||||| |||| || || ||| |||||||||    
T  7758329 ctaataattttagaaaattatataattcagtataattatgtgtgtcggtgtcgtgt 7758384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 13770666 - 13770733
Alignment:
Q  120 gacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaat 187  Q
    ||||| ||| |||||||||||| |  | || ||||||||||||| ||||||| |||||||||||||||    
T  13770666 gacacgacacggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaat 13770733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 7328749 - 7328688
Alignment:
Q  146 ataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    |||| ||||||||||| ||||||| | |||||| |||||||| ||||| ||| |||||||||    
T  7328749 atactgctaataatttgagaaaataacataatttagtgtaattatatgtgtcggtgtcgtgt 7328688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 21568675 - 21568622
Alignment:
Q  151 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    |||||||||||||||||||   |||||| |||||||||||||| ||| ||||||    
T  21568675 gctaataatttaagaaaatctcataattaagtgtaatcatatgagtcggtgtcg 21568622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 21880157 - 21880194
Alignment:
Q  150 cgctaataatttaagaaaattatataattcagtgtaat 187  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  21880157 cgctaataatttgagaaaattacataattcagtgtaat 21880194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 24339648 - 24339721
Alignment:
Q  151 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    ||||||||||| | ||||| | ||||||||||||||| | | | ||| |||||||||  |||||||||||||||    
T  24339648 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgaca 24339721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 6630964 - 6630896
Alignment:
Q  152 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 220  Q
    |||||||||| ||||| | |  |||||||||||||| ||||| |||  ||||||||| |||||||||||    
T  6630964 ctaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggacac 6630896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 8239101 - 8239061
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    |||||||||||||||||  |||||||||||||||| |||||    
T  8239101 taataatttaagaaaatcttataattcagtgtaattatatg 8239061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 10377515 - 10377555
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    ||||||| ||||||||| ||||||||||||||||| |||||    
T  10377515 taataatataagaaaatcatataattcagtgtaattatatg 10377555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 12278843 - 12278883
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    ||||||||||||||||| | ||||||||||||||| |||||    
T  12278843 taataatttaagaaaatgacataattcagtgtaattatatg 12278883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 20549794 - 20549850
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    |||||||||||||| ||||||| |  |||||||||||||| ||||| ||| ||||||    
T  20549794 accgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcg 20549850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 21141034 - 21141002
Alignment:
Q  152 ctaataatttaagaaaattatataattcagtgt 184  Q
    |||||||||||||||||| ||||||||||||||    
T  21141034 ctaataatttaagaaaatcatataattcagtgt 21141002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 30813818 - 30813854
Alignment:
Q  151 gctaataatttaagaaaattatataattcagtgtaat 187  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  30813818 gctaataatttgagaaaattacataattcagtgtaat 30813854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 41811668 - 41811712
Alignment:
Q  175 aattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggaca 219  Q
    |||||| |||||||||||| |||||||||||||| ||||| ||||    
T  41811668 aattcaatgtaatcatatgtgtcagtgtcgtgttggtgtcagaca 41811712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 193
Target Start/End: Complemental strand, 15410534 - 15410459
Alignment:
Q  118 cagacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    ||||||| ||| ||||||||| || |  | ||||||||||||||||||||||||||| ||||||||||||||||||    
T  15410534 cagacacgacacggacactgacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaatcatatg 15410459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 217
Target Start/End: Complemental strand, 2236839 - 2236772
Alignment:
Q  150 cgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcgga 217  Q
    ||||||||||||||||||||||||||||| | ||||||  ||||| || ||||||||| |||||||||    
T  2236839 cgctaataatttaagaaaattatataatttaatgtaattttatgcatcggtgtcgtgtccgtgtcgga 2236772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 3966506 - 3966578
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 220  Q
    |||||||||||||| ||||||| | | ||||||||||||| ||||| ||| |||||||||  |||||||||||    
T  3966506 accgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacac 3966578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 18592076 - 18592148
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 220  Q
    |||||||||| ||||||||||||| |||||||| |||||| ||||| | | |||||||||  |||||||||||    
T  18592076 accgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgtcgtgtcggtgtcggacac 18592148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 32630791 - 32630735
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    |||| ||||||||| |||||||||||||||||| |||||| ||||| ||||||||||    
T  32630791 accgataataatttgagaaaattatataattcaatgtaattatatgtgtcagtgtcg 32630735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 36838546 - 36838606
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgtt 208  Q
    |||||||||||||| ||||||||| |||||| |||||||| ||||| ||| ||||||||||    
T  36838546 accgctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcgtgtt 36838606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 224
Target Start/End: Original strand, 39698526 - 39698620
Alignment:
Q  130 ggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    ||||||||| || || | || ||||||||||| | ||||| | ||||||||||||||| | | | |||||||||||||  |||||||||||||||    
T  39698526 ggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgaca 39698620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 193
Target Start/End: Complemental strand, 33035880 - 33035812
Alignment:
Q  125 aacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    |||||||||||||||||||  |||||  ||||||||| |  |||| ||||||||||||||||| |||||    
T  33035880 aacatggacactgatacaccgataccattaataatttgaataaatcatataattcagtgtaattatatg 33035812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 187
Target Start/End: Original strand, 27932238 - 27932277
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaat 187  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  27932238 accgctaataatttgagaaaattacataattcagtgtaat 27932277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 12927659 - 12927712
Alignment:
Q  150 cgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtc 203  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||  |||||||||    
T  12927659 cgctaataatttgagaaaatcatataatttagtgtaattatatatgtcagtgtc 12927712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 224
Target Start/End: Original strand, 19579679 - 19579780
Alignment:
Q  123 acaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacga 222  Q
    |||||| |||||||||||| |  | || ||||||||||| ||||||| | |||||| |||| ||| | | | ||| |||||||||  |||||||||||||    
T  19579679 acaacacggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacga 19579778  T
Q  223 ca 224  Q
    ||    
T  19579779 ca 19579780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 193
Target Start/End: Original strand, 26312744 - 26312817
Alignment:
Q  120 gacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    ||||| |||||||||||||||  |  ||||||| |||||||| ||||||| |  |||||||||||||| |||||    
T  26312744 gacacgacatggacactgatatgccgataccgcaaataatttgagaaaatcaattaattcagtgtaattatatg 26312817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 34879353 - 34879398
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    |||||||| ||||| ||||||| ||||||||||||||||| |||||    
T  34879353 accgctaaaaatttgagaaaatcatataattcagtgtaataatatg 34879398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 2419865 - 2419930
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 220  Q
    ||||||||| ||||||||| | ||||||||||||||  ||| ||||||| |||||| ||||| |||||    
T  2419865 taataatttgagaaaattacacaattcagtgtaatc--atgtgtcagtgccgtgttggtgtcagacac 2419930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 2548390 - 2548446
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    |||| ||||||||  ||||||||| ||||||||||||||||||| | ||| ||||||    
T  2548390 accgataataattagagaaaattacataattcagtgtaatcataagtgtcggtgtcg 2548446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 6471942 - 6471886
Alignment:
Q  151 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    ||||||||||| ||||||| | ||||||||||||||| ||||| ||  |||||||||    
T  6471942 gctaataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcgtgt 6471886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 19293474 - 19293434
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    ||||||||||||||||| | |||||| ||||||||||||||    
T  19293474 taataatttaagaaaataacataattaagtgtaatcatatg 19293434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 21542037 - 21542109
Alignment:
Q  152 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    |||||||||||| || || | ||||||||||||||| | | | ||| |||||||||  |||||||||||||||    
T  21542037 ctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgaca 21542109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 30502444 - 30502388
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    |||||||||||||| ||||||| |  |||||||||||||| ||||| ||| ||||||    
T  30502444 accgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 30502388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 30542787 - 30542731
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    |||||||||||||| ||||||| |  |||||||||||||| ||||| ||| ||||||    
T  30542787 accgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcg 30542731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 24975381 - 24975309
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 220  Q
    |||||||||||||| |||||||  |||||||||||||||  ||||||||| ||||||||| |||||| |||||    
T  24975381 accgctaataatttgagaaaatcgtataattcagtgtaaatatatgcgtcggtgtcgtgtccgtgtcagacac 24975309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 44860323 - 44860399
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    |||||||||||||| |||||||   ||||||||||||||| ||||| ||| |||||||||| |||| ||||||||||    
T  44860323 accgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgaca 44860399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 18889646 - 18889575
Alignment:
Q  149 ccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 220  Q
    |||||||||| || ||||||| | ||||||||||||||||||||| ||| ||||| |||| |||||||||||    
T  18889646 ccgctaataaattgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcttgtttgtgtcggacac 18889575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 31456697 - 31456629
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcgg 216  Q
    ||||||||||||||||||||||||| |||||||||||||| ||| |  ||||| ||||||  |||||||    
T  31456697 accgctaataatttaagaaaattatgtaattcagtgtaattataagtatcagtttcgtgtaggtgtcgg 31456629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 31808058 - 31808134
Alignment:
Q  126 acatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgt 202  Q
    |||| |||||||| ||||  | |||||||||||||||| ||||| | ||||||||||||||| ||||| ||||||||    
T  31808058 acattgacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtcagtgt 31808134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 34691863 - 34691805
Alignment:
Q  146 ataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    |||||||||||||||| | ||||| ||||||||||||||||| ||||| ||| ||||||    
T  34691863 ataccgctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcg 34691805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 34714275 - 34714217
Alignment:
Q  146 ataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    |||||||||||||||| | ||||| ||||||||||||||||| ||||| ||| ||||||    
T  34714275 ataccgctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcg 34714217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 35056894 - 35056947
Alignment:
Q  171 atataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    ||||||||||||||||| ||||| ||| |||||||||  |||||||||||||||    
T  35056894 atataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgaca 35056947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 18570975 - 18571031
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    |||| ||||||||| ||||||| | |||||||| |||||||||||| ||||||||||    
T  18570975 accgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcg 18571031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 36281685 - 36281761
Alignment:
Q  145 aataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacg 221  Q
    ||||||| ||||||||| ||||||| | |||||| ||||||||||||||  ||  ||| |||| |||||||||||||    
T  36281685 aataccgttaataatttgagaaaatcacataatttagtgtaatcatatgtttcgatgtggtgtccgtgtcggacacg 36281761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 21091698 - 21091765
Alignment:
Q  120 gacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaat 187  Q
    ||||||| | ||||||||| ||||  | |||||||||||||||||||||| | ||| |||||||||||    
T  21091698 gacacaagacggacactgacacaccgacaccgctaataatttaagaaaataacatacttcagtgtaat 21091765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 23406876 - 23406927
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    ||||||||||||||||||| |||||||||  |||||||| | ||||||||||    
T  23406876 taataatttaagaaaattacataattcagaataatcataggtgtcagtgtcg 23406927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 17520119 - 17520081
Alignment:
Q  155 ataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  17520119 ataatttaagaaaatcacataattcagtgtaatcatatg 17520081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 25544489 - 25544527
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcata 191  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  25544489 taataatttgagaaaatgatataattcagtgtaatcata 25544527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 6045974 - 6045897
Alignment:
Q  146 ataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgac 223  Q
    |||||||||||||||| | ||||| ||| ||||||  ||| | ||||| ||| |||| ||||| ||||||||||||||    
T  6045974 ataccgctaataatttgataaaatcatacaattcaaagtagttatatgtgtcggtgtggtgttggtgtcggacacgac 6045897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 15909690 - 15909629
Alignment:
Q  146 ataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    |||| ||||| | ||| ||||||||| ||||||||||||||| ||||| | |||||||||||    
T  15909690 atacagctaaaattttgagaaaattacataattcagtgtaattatatgtgacagtgtcgtgt 15909629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 21616765 - 21616810
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||||    
T  21616765 accgctaataatttgagaaaatcacataattcagtgtaattatatg 21616810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 23921254 - 23921295
Alignment:
Q  146 ataccgctaataatttaagaaaattatataattcagtgtaat 187  Q
    |||||| ||||||||| ||||||||| |||||||||||||||    
T  23921254 ataccgttaataatttgagaaaattacataattcagtgtaat 23921295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 4229459 - 4229419
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    ||||||||||||| ||| | |||||||||||||||||||||    
T  4229459 taataatttaagagaatgacataattcagtgtaatcatatg 4229419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 263
Target Start/End: Original strand, 27084344 - 27084384
Alignment:
Q  223 caacactgagacacgcctaatctgatgagtgtctctgcttc 263  Q
    |||||| ||||||||||||||| || |||||||||||||||    
T  27084344 caacaccgagacacgcctaatcggaggagtgtctctgcttc 27084384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 29970622 - 29970546
Alignment:
Q  131 gacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    |||||||| ||| | | |||||||||||||| |||||||   ||| ||||||||||||||||| |||  ||||||||    
T  29970622 gacactgacacattgacaccgctaataatttgagaaaatcgcatagttcagtgtaatcatatgtgtcgatgtcgtgt 29970546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 31026698 - 31026742
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatat 192  Q
    |||| ||||||||||||||||| | |||||||| |||||||||||    
T  31026698 accgataataatttaagaaaatgacataattcaatgtaatcatat 31026742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 3900 - 3829
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    ||||||||||| ||||| | ||||||||||||||| | | | |||||||||||||| |||||||||||||||    
T  3900 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgaca 3829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 7996431 - 7996378
Alignment:
Q  151 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    ||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||    
T  7996431 gctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 7996378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 8022370 - 8022423
Alignment:
Q  151 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    ||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||    
T  8022370 gctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 8022423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 9658850 - 9658926
Alignment:
Q  116 cacagacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatat 192  Q
    ||||||||| ||| ||||||||| || |  | |||||||||||||||||||||| | ||||||||||||||| ||||    
T  9658850 cacagacacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatat 9658926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 7265667 - 7265593
Alignment:
Q  130 ggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    ||||||||| || | || |||||||||||||| ||||||| | ||||||||||||||| ||||| ||| ||||||    
T  7265667 ggacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 7265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 10294108 - 10294186
Alignment:
Q  146 ataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    |||||||||||||||| ||| |||   ||| |||| |||||| ||||| ||| |||||||||| |||||||||||||||    
T  10294108 ataccgctaataatttgagataatcgcatatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcggacacgaca 10294186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 34895085 - 34895035
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtc 203  Q
    ||||||||| ||||||||||| ||||||||||||||||| | |||||||||    
T  34895085 taataatttgagaaaattatacaattcagtgtaatcataggtgtcagtgtc 34895035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 24614411 - 24614452
Alignment:
Q  146 ataccgctaataatttaagaaaattatataattcagtgtaat 187  Q
    |||||||||||||||||| |||||||||||||| ||||||||    
T  24614411 ataccgctaataatttaaaaaaattatataatttagtgtaat 24614452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 9024225 - 9024173
Alignment:
Q  155 ataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    ||||||| ||||||| | |||||||| |||||||||||| |||||||||||||    
T  9024225 ataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcgtgt 9024173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 9025547 - 9025491
Alignment:
Q  151 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    ||||||||||| ||||||| | ||||||||||||||| ||||| ||| |||||||||    
T  9025547 gctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 9025491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 19040355 - 19040411
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    |||||||||||||| ||||||| | ||||||||||||||| ||||| ||| ||||||    
T  19040355 accgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcg 19040411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 187
Target Start/End: Complemental strand, 8389524 - 8389489
Alignment:
Q  152 ctaataatttaagaaaattatataattcagtgtaat 187  Q
    |||||||||||||||||| |||||||||||||||||    
T  8389524 ctaataatttaagaaaatcatataattcagtgtaat 8389489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 13364754 - 13364707
Alignment:
Q  155 ataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgt 202  Q
    ||||||| ||||||| ||||||||||||||||||||||| ||| ||||    
T  13364754 ataatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgt 13364707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 187
Target Start/End: Complemental strand, 31579309 - 31579242
Alignment:
Q  120 gacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaat 187  Q
    ||||| ||||||||||||  |||| || |||| ||||||||| ||||||| | |||||||||||||||    
T  31579309 gacacgacatggacactgccacaccaacaccgttaataatttgagaaaatcacataattcagtgtaat 31579242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 187
Target Start/End: Complemental strand, 32511722 - 32511683
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaat 187  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  32511722 accgctaataatttaagaaaatcacataattcagtgtaat 32511683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 19602232 - 19602194
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcata 191  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  19602232 taataatttgagaaaatgatataattcagtgtaatcata 19602194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 28862151 - 28862197
Alignment:
Q  174 taattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 220  Q
    |||||||||||||||||||| ||| |||||||||| ||||| |||||    
T  28862151 taattcagtgtaatcatatgtgtcggtgtcgtgttggtgtctgacac 28862197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 1532243 - 1532288
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    |||||||||||||| | ||||||| ||||||||||||||| |||||    
T  1532243 accgctaataatttgataaaattacataattcagtgtaattatatg 1532288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 224
Target Start/End: Complemental strand, 10339174 - 10339105
Alignment:
Q  156 taatttaagaaaattatataattcagtgt-aatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    |||||| ||||||| | |||||||||||| ||| ||||| ||||||| |||||  |||||||||||||||    
T  10339174 taatttgagaaaatcacataattcagtgttaattatatgtgtcagtgccgtgtcggtgtcggacacgaca 10339105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 34073401 - 34073344
Alignment:
Q  150 cgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    |||||||||||| |||||||   ||||||||||||||| ||||| ||| |||||||||    
T  34073401 cgctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgt 34073344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 187
Target Start/End: Original strand, 2224232 - 2224268
Alignment:
Q  151 gctaataatttaagaaaattatataattcagtgtaat 187  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  2224232 gctaataatttaaaaaaatcatataattcagtgtaat 2224268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 9629386 - 9629458
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 220  Q
    ||||| |||||||| ||||||| | |||||||| |||||| ||||| ||| ||||||   |||||||||||||    
T  9629386 accgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggtgtcgtgtcggacac 9629458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 12696330 - 12696386
Alignment:
Q  151 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    ||||||||||| | ||||||| ||||||||||||||| | | | |||||||||||||    
T  12696330 gctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgt 12696386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 16766672 - 16766772
Alignment:
Q  120 gacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggaca 219  Q
    ||||| ||||||||||||| || |  | || ||||||||||| | ||||| | ||||||||||||||| | | | ||| |||||||||  ||||||||||    
T  16766672 gacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggaca 16766771  T
Q  220 c 220  Q
    |    
T  16766772 c 16766772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 7424643 - 7424716
Alignment:
Q  118 cagacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcata 191  Q
    ||||||| |||||||||| || |||  || |||| ||||||||||||||||| |||||||| ||||||||||||    
T  7424643 cagacacgacatggacaccgacacatcaacaccgataataatttaagaaaataatataattgagtgtaatcata 7424716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 22440687 - 22440611
Alignment:
Q  117 acagacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    |||||||| |||||||||||||||||   | |||| ||||||||| ||||||| | ||||||||||||||| |||||    
T  22440687 acagacacgacatggacactgatacatcgacaccgttaataatttgagaaaatcacataattcagtgtaattatatg 22440611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 37698719 - 37698759
Alignment:
Q  152 ctaataatttaagaaaattatataattcagtgtaatcatat 192  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  37698719 ctaataatttgagaaaattatataattcagtgtaattatat 37698759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 18513297 - 18513238
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    |||| ||||||||| ||||||| | |||||||| |||||||||||| |||||||| ||||    
T  18513297 accgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgttgtgt 18513238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 224
Target Start/End: Original strand, 30838182 - 30838289
Alignment:
Q  117 acagacacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcgg 216  Q
    ||||||||  || ||||||||||||    |||| ||||||||||| | |||||||||||||| |||||||| ||| |  || |||||||||  |||||||    
T  30838182 acagacacggcacggacactgatacgtcgatactgctaataatttgataaaattatataatttagtgtaattataagtatcggtgtcgtgtcagtgtcgg 30838281  T
Q  217 acacgaca 224  Q
    || |||||    
T  30838282 acgcgaca 30838289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 5922573 - 5922535
Alignment:
Q  225 acactgagacacgcctaatctgatgagtgtctctgcttc 263  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  5922573 acactgggacacgcctaatctgaggagtgtctctgcttc 5922535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Complemental strand, 43241027 - 43240997
Alignment:
Q  148 accgctaataatttaagaaaattatataatt 178  Q
    |||||||||||||||||||||||||||||||    
T  43241027 accgctaataatttaagaaaattatataatt 43240997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 56488566 - 56488516
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtca 198  Q
    |||||||| ||||| ||||||| ||||||||||| ||||||||||| ||||    
T  56488566 accgctaacaatttgagaaaatcatataattcagggtaatcatatgtgtca 56488516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 847955 - 848028
Alignment:
Q  149 ccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacga 222  Q
    ||||||||||||| ||||||||| |||||||| | |||| | | | ||| ||||| |||| |||||||||||||    
T  847955 ccgctaataatttgagaaaattacataattcactataattacaagtgtcggtgtcttgttggtgtcggacacga 848028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 6933282 - 6933335
Alignment:
Q  152 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgt 205  Q
    |||||||| |||||||||   |||||||||| |||||||||| |||||||||||    
T  6933282 ctaataatgtaagaaaatctcataattcagtttaatcatatgtgtcagtgtcgt 6933335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 56257939 - 56257993
Alignment:
Q  151 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    ||||||||||| ||||||| |||||||||||||||||  |||| ||| |||||||||    
T  56257939 gctaataatttgagaaaatcatataattcagtgtaat--tatgtgtctgtgtcgtgt 56257993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 903925 - 904001
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    |||| ||||||||| ||||||| | ||||||||||||||| |||||  ||||| |||| |  |||| ||||||||||    
T  903925 accgttaataatttgagaaaatcacataattcagtgtaattatatgtatcagtatcgtatcggtgttggacacgaca 904001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 1213271 - 1213232
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  1213271 taataatttaa-aaaattatataattcagtgtaattatatg 1213232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 30982934 - 30982858
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    ||||||||| |||| ||||||| | ||| ||||||||||| ||| | ||| |||||||||  ||||| |||||||||    
T  30982934 accgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgaca 30982858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 31243599 - 31243532
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtc-gtgttcgtgtcggacac 220  Q
    ||||||||| ||||||| | ||||||||||||||||||| | |||| |||| ||||| |||||||||||    
T  31243599 taataatttgagaaaatgacataattcagtgtaatcataggtgtca-tgtcggtgttggtgtcggacac 31243532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 35952670 - 35952614
Alignment:
Q  151 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    ||||||||||| | ||||| |||||||||| |||||| |||||  ||||||||||||    
T  35952670 gctaataatttgataaaatcatataattcaatgtaattatatgtatcagtgtcgtgt 35952614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 55941054 - 55941014
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    ||||||||||||||||||| |||||| ||| ||||||||||    
T  55941054 taataatttaagaaaattacataatttagtataatcatatg 55941014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 56932 - 56984
Alignment:
Q  155 ataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    ||||||| ||||||| ||||||||||||||||||||| | |||||||||||||    
T  56932 ataatttgagaaaatgatataattcagtgtaatcataagtgtcagtgtcgtgt 56984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 63771 - 63811
Alignment:
Q  143 ctaataccgctaataatttaagaaaattatataattcagtg 183  Q
    |||| |||||||||||||| ||||||||| |||||||||||    
T  63771 ctaacaccgctaataatttgagaaaattacataattcagtg 63811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 9799 - 9727
Alignment:
Q  152 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    |||||||||| ||||||| |  |||||||||||||| ||||| ||| |||||||||| ||||| |||||||||    
T  9799 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgttggtgtcagacacgaca 9727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 11803246 - 11803338
Alignment:
Q  132 acactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    ||||||||||||| | || | ||||||||||||||||| | ||||||||||||||| ||||| ||  |||| ||||| |||| ||| ||||||    
T  11803246 acactgatacactgacactgttaataatttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgttggtgttggatacgaca 11803338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 14634197 - 14634153
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatat 192  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||    
T  14634197 accgctaacaatttaagaaaattatataattcagtgtaattatat 14634153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 12559159 - 12559117
Alignment:
Q  151 gctaataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    ||||||||||| ||||||| |||||||||||||||||||||||    
T  12559159 gctaataatttgagaaaatgatataattcagtgtaatcatatg 12559117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 24362258 - 24362181
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgt-cggacacgaca 224  Q
    |||||||||||||| ||| ||| | ||||||||||||||| ||||| |||| ||||||||  |||| |||||||||||    
T  24362258 accgctaataatttgagagaatcacataattcagtgtaattatatgtgtcaatgtcgtgtcggtgtccggacacgaca 24362181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 15816181 - 15816109
Alignment:
Q  152 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    |||||||||| | ||||| | |||||| |||||||| ||| | ||| |||||||||| |||||||||||||||    
T  15816181 ctaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgaca 15816109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 4786389 - 4786338
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    ||||||||||||||||| | ||||||||||||||| ||||| ||| ||||||    
T  4786389 taataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 4786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 11927137 - 11927066
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    ||||||||| | ||||| | ||||||||||||||| ||||| ||| |||||||||| |||||  ||||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgttggtgtcatacacgaca 11927066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 29198530 - 29198480
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtc 203  Q
    ||||||||| ||||||| | |||||||| ||||||||||||||||| ||||    
T  29198530 taataatttgagaaaatgacataattcaatgtaatcatatgcgtcaatgtc 29198480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 3025557 - 3025610
Alignment:
Q  151 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcg 204  Q
    ||||||||||| ||||||| | ||||||||||||||| ||| | ||||||||||    
T  3025557 gctaataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcg 3025610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 4611537 - 4611582
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||||    
T  4611537 accgctaataatttgagaaaataacataattcagtgtaattatatg 4611582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 13203648 - 13203693
Alignment:
Q  152 ctaataatttaagaaaattatataattcagtgtaatcatatgcgtc 197  Q
    |||||||||| ||||||||| ||||||||||||||| |||| ||||    
T  13203648 ctaataatttgagaaaattacataattcagtgtaattatatacgtc 13203693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 26902216 - 26902155
Alignment:
Q  163 agaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    ||||||| | ||||||||||||||| ||||| ||| ||||||| |  |||||||||||||||    
T  26902216 agaaaatcacataattcagtgtaattatatgtgtcggtgtcgtatgagtgtcggacacgaca 26902155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 34897088 - 34897133
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    |||||||||||||| ||||||| | ||||||||||||||| |||||    
T  34897088 accgctaataatttgagaaaatcacataattcagtgtaattatatg 34897133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 7658470 - 7658510
Alignment:
Q  152 ctaataatttaagaaaattatataattcagtgtaatcatat 192  Q
    |||||||||| ||||||||| ||||||||||||||| ||||    
T  7658470 ctaataatttgagaaaattacataattcagtgtaattatat 7658510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 9936822 - 9936862
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatg 193  Q
    ||||||||||||||||| |||||||||| | ||||||||||    
T  9936822 taataatttaagaaaatgatataattcaatataatcatatg 9936862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 12606882 - 12606830
Alignment:
Q  151 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtc 203  Q
    ||||||||||| ||||||| |||||||||| |||||| ||||| ||| |||||    
T  12606882 gctaataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgtc 12606830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 26507450 - 26507486
Alignment:
Q  155 ataatttaagaaaattatataattcagtgtaatcata 191  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  26507450 ataatttaagaaaataatataattaagtgtaatcata 26507486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 33382075 - 33382015
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgtt 208  Q
    |||| ||||||||||||||||| | ||||||||| ||||| ||||| ||| ||||| ||||    
T  33382075 accgataataatttaagaaaatgacataattcagagtaattatatgtgtcggtgtcatgtt 33382015  T

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Target: scaffold1528 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 1038 - 1115
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgacaa 225  Q
    |||||||||||||| | ||||||| ||||||||||||||  ||||| |||||||| ||||  |||| |||||| ||||    
T  1038 accgctaataatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaacaa 1115  T

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Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 263425 - 263352
Alignment:
Q  151 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    ||||||||||| ||||||  | ||||||||||||||| ||| | |||||||||||||  ||||| |||||||||    
T  263425 gctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacgaca 263352  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 137789 - 137856
Alignment:
Q  154 aataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacg 221  Q
    |||||||||||||||| | | ||||||||||| ||||||| ||  |||||||||  ||||||||||||    
T  137789 aataatttaagaaaatcacacaattcagtgtagtcatatgtgttggtgtcgtgtcagtgtcggacacg 137856  T

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Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 135365 - 135309
Alignment:
Q  151 gctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgt 207  Q
    ||||||||||| ||||||| | ||||||| ||||||| ||||| ||| |||||||||    
T  135365 gctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgt 135309  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 187
Target Start/End: Original strand, 92810 - 92849
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaat 187  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  92810 accgctaataatttgagaaaattacataattcagtgtaat 92849  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 53181 - 53259
Alignment:
Q  146 ataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacacgaca 224  Q
    ||||||| |||||||| ||||||| | ||||||||||||||| ||| | ||| ||| |||||  |||||||||| ||||    
T  53181 ataccgccaataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgaca 53259  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 240072 - 240022
Alignment:
Q  153 taataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtc 203  Q
    ||||||||| ||||||| |||||||||| |||||||||||| ||| |||||    
T  240072 taataatttgagaaaataatataattcaatgtaatcatatgtgtcggtgtc 240022  T

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Target: scaffold0188 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 9515 - 9564
Alignment:
Q  120 gacacaacatggacactgatacactaataccgctaataatttaagaaaat 169  Q
    ||||||||||||||||||| ||||| | |||||||||||| | |||||||    
T  9515 gacacaacatggacactgagacactcacaccgctaataatatgagaaaat 9564  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 90829 - 90890
Alignment:
Q  131 gacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatat 192  Q
    |||||||| |||| || |||  ||||||||| ||||||| ||||||||||||||||| ||||    
T  90829 gacactgacacaccaacaccattaataatttgagaaaatcatataattcagtgtaattatat 90890  T

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Target: scaffold0123 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 220
Target Start/End: Complemental strand, 44581 - 44509
Alignment:
Q  148 accgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgtgttcgtgtcggacac 220  Q
    |||||||| ||||| ||||||| | ||||||||||||||| ||||| ||| || ||||||  |||| ||||||    
T  44581 accgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacac 44509  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 68325 - 68241
Alignment:
Q  121 acacaacatggacactgatacactaataccgctaataatttaagaaaattatataattcagtgtaatcatatgcgtcagtgtcgt 205  Q
    |||||||||| | ||||| ||| ||  |||| ||||||||| ||||||| |||||||| ||| |||| ||| | |||||||||||    
T  68325 acacaacatgaatactgacacattagcaccgttaataatttgagaaaatcatataatttagtataattataggtgtcagtgtcgt 68241  T

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