View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12579_low_44 (Length: 260)

Name: NF12579_low_44
Description: NF12579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12579_low_44
NF12579_low_44
[»] chr8 (40 HSPs)
chr8 (7-198)||(20083621-20083812)
chr8 (16-177)||(6573060-6573221)
chr8 (16-185)||(42817903-42818072)
chr8 (16-167)||(5082226-5082377)
chr8 (23-185)||(19140659-19140820)
chr8 (16-181)||(5761421-5761585)
chr8 (16-191)||(6101743-6101918)
chr8 (16-177)||(6202664-6202824)
chr8 (16-185)||(39936003-39936175)
chr8 (16-177)||(37292593-37292753)
chr8 (7-128)||(20178581-20178704)
chr8 (27-186)||(20397505-20397656)
chr8 (13-198)||(31722476-31722661)
chr8 (59-191)||(45469209-45469342)
chr8 (21-188)||(22532125-22532292)
chr8 (21-188)||(22536810-22536977)
chr8 (69-191)||(36727028-36727151)
chr8 (21-177)||(39694281-39694437)
chr8 (59-181)||(20022040-20022155)
chr8 (59-188)||(22317904-22318033)
chr8 (77-181)||(17906849-17906953)
chr8 (69-191)||(23899977-23900100)
chr8 (129-181)||(4380617-4380669)
chr8 (129-185)||(18761448-18761504)
chr8 (78-181)||(19700109-19700213)
chr8 (114-181)||(23889784-23889851)
chr8 (77-182)||(17218649-17218755)
chr8 (59-131)||(42265559-42265631)
chr8 (111-182)||(36305837-36305908)
chr8 (152-198)||(18816278-18816324)
chr8 (100-181)||(23419411-23419493)
chr8 (78-181)||(23948211-23948315)
chr8 (114-181)||(22583660-22583727)
chr8 (151-185)||(22258302-22258336)
chr8 (59-131)||(3273819-3273892)
chr8 (105-181)||(22254741-22254818)
chr8 (149-181)||(17158963-17158995)
chr8 (149-181)||(19880842-19880874)
chr8 (149-181)||(23479102-23479134)
chr8 (129-181)||(26454708-26454760)
[»] chr3 (52 HSPs)
chr3 (16-198)||(40807883-40808065)
chr3 (16-191)||(40812720-40812895)
chr3 (16-198)||(44274305-44274487)
chr3 (7-181)||(49900608-49900782)
chr3 (16-185)||(17044853-17045022)
chr3 (16-185)||(11259318-11259487)
chr3 (16-185)||(17047013-17047182)
chr3 (16-181)||(17518873-17519038)
chr3 (16-181)||(17533735-17533900)
chr3 (28-185)||(22306579-22306736)
chr3 (16-185)||(17538993-17539162)
chr3 (16-198)||(10563596-10563777)
chr3 (16-185)||(17693954-17694123)
chr3 (18-185)||(41172367-41172534)
chr3 (16-166)||(50348041-50348191)
chr3 (16-177)||(10311415-10311575)
chr3 (16-185)||(35354489-35354658)
chr3 (16-185)||(15931504-15931672)
chr3 (32-185)||(14508749-14508903)
chr3 (21-198)||(19568191-19568368)
chr3 (61-198)||(33565018-33565156)
chr3 (64-156)||(35064566-35064658)
chr3 (21-188)||(9510909-9511076)
chr3 (21-188)||(9518884-9519051)
chr3 (61-198)||(35960911-35961049)
chr3 (59-198)||(42323954-42324094)
chr3 (77-181)||(16050875-16050979)
chr3 (16-80)||(35064681-35064745)
chr3 (59-181)||(11563654-11563777)
chr3 (16-74)||(5200277-5200335)
chr3 (118-185)||(17541423-17541490)
chr3 (59-182)||(49968858-49968981)
chr3 (69-191)||(13185834-13185957)
chr3 (80-198)||(22758817-22758935)
chr3 (77-181)||(24177736-24177840)
chr3 (80-178)||(11885560-11885658)
chr3 (59-144)||(37038978-37039065)
chr3 (140-198)||(5200226-5200284)
chr3 (100-181)||(12509350-12509431)
chr3 (129-181)||(15446868-15446920)
chr3 (129-177)||(15566744-15566792)
chr3 (151-198)||(6156732-6156779)
chr3 (113-181)||(36528851-36528919)
chr3 (151-198)||(2841489-2841536)
chr3 (151-198)||(5215669-5215716)
chr3 (151-198)||(14520468-14520515)
chr3 (158-196)||(9707230-9707268)
chr3 (158-196)||(16749559-16749597)
chr3 (129-191)||(17208524-17208586)
chr3 (158-196)||(19776302-19776340)
chr3 (73-139)||(31223887-31223952)
chr3 (59-131)||(45530652-45530725)
[»] scaffold0334 (1 HSPs)
scaffold0334 (16-195)||(405-584)
[»] scaffold1941 (1 HSPs)
scaffold1941 (16-198)||(25-207)
[»] chr2 (35 HSPs)
chr2 (16-198)||(24516073-24516255)
chr2 (16-181)||(17307373-17307538)
chr2 (13-185)||(5031125-5031297)
chr2 (16-185)||(9975816-9975985)
chr2 (16-185)||(24780836-24781005)
chr2 (16-185)||(24436535-24436704)
chr2 (16-181)||(40912207-40912372)
chr2 (16-181)||(19201200-19201365)
chr2 (29-185)||(22251444-22251600)
chr2 (16-177)||(37270587-37270747)
chr2 (16-144)||(27484514-27484642)
chr2 (16-185)||(2523743-2523912)
chr2 (16-133)||(36841151-36841268)
chr2 (59-196)||(25142133-25142271)
chr2 (57-198)||(1383526-1383667)
chr2 (57-181)||(357809-357933)
chr2 (67-190)||(27852605-27852729)
chr2 (59-191)||(3539766-3539899)
chr2 (81-191)||(44072509-44072619)
chr2 (57-181)||(22501897-22502023)
chr2 (57-181)||(22509831-22509957)
chr2 (78-181)||(25046066-25046170)
chr2 (58-112)||(24884399-24884453)
chr2 (64-188)||(22259974-22260097)
chr2 (78-181)||(5986125-5986229)
chr2 (83-198)||(23068390-23068505)
chr2 (151-198)||(21315459-21315506)
chr2 (151-198)||(21335249-21335296)
chr2 (59-131)||(19358820-19358893)
chr2 (100-191)||(14694296-14694388)
chr2 (129-181)||(25184189-25184241)
chr2 (59-188)||(18388183-18388312)
chr2 (69-166)||(18390229-18390326)
chr2 (129-181)||(21080969-21081021)
chr2 (80-131)||(39683162-39683214)
[»] chr1 (28 HSPs)
chr1 (16-185)||(19676598-19676767)
chr1 (16-198)||(42912936-42913118)
chr1 (16-185)||(21046045-21046214)
chr1 (16-181)||(16058314-16058478)
chr1 (16-185)||(20633627-20633799)
chr1 (21-188)||(51324396-51324563)
chr1 (77-191)||(13302849-13302964)
chr1 (57-198)||(7051905-7052046)
chr1 (57-188)||(24723344-24723475)
chr1 (32-198)||(4595836-4595995)
chr1 (20-186)||(21168825-21168990)
chr1 (78-181)||(42697732-42697836)
chr1 (59-186)||(7320589-7320716)
chr1 (100-191)||(21239039-21239130)
chr1 (129-181)||(12327743-12327795)
chr1 (59-190)||(22350646-22350777)
chr1 (78-181)||(45755468-45755572)
chr1 (57-112)||(44822090-44822145)
chr1 (151-198)||(50544894-50544941)
chr1 (129-181)||(51336479-51336531)
chr1 (111-184)||(45499374-45499446)
chr1 (80-141)||(11946391-11946453)
chr1 (158-196)||(39243662-39243700)
chr1 (158-196)||(39247217-39247255)
chr1 (59-92)||(8276079-8276112)
chr1 (59-92)||(38056762-38056795)
chr1 (129-181)||(29763632-29763684)
chr1 (129-181)||(46197745-46197797)
[»] chr7 (59 HSPs)
chr7 (16-185)||(12465256-12465425)
chr7 (16-198)||(14180381-14180563)
chr7 (16-185)||(8851155-8851324)
chr7 (16-198)||(20214034-20214216)
chr7 (16-182)||(20620173-20620339)
chr7 (16-185)||(12372161-12372330)
chr7 (16-185)||(32433585-32433754)
chr7 (16-182)||(13147471-13147637)
chr7 (16-198)||(20586239-20586421)
chr7 (16-185)||(11067355-11067524)
chr7 (16-185)||(12322926-12323095)
chr7 (16-191)||(46386078-46386253)
chr7 (16-185)||(16999320-16999492)
chr7 (16-181)||(12127163-12127328)
chr7 (16-177)||(10277215-10277375)
chr7 (16-186)||(24269942-24270112)
chr7 (69-191)||(14218885-14219008)
chr7 (57-181)||(47974820-47974944)
chr7 (59-188)||(8135231-8135359)
chr7 (59-191)||(15140143-15140275)
chr7 (59-191)||(48807315-48807448)
chr7 (59-188)||(15095630-15095759)
chr7 (59-198)||(13698621-13698761)
chr7 (60-191)||(15623950-15624080)
chr7 (21-182)||(33002053-33002206)
chr7 (52-182)||(25943041-25943171)
chr7 (69-181)||(35771441-35771554)
chr7 (119-181)||(44374833-44374895)
chr7 (119-181)||(44383698-44383760)
chr7 (59-139)||(13132363-13132443)
chr7 (69-181)||(4071759-4071872)
chr7 (81-181)||(16078281-16078382)
chr7 (77-181)||(12754612-12754716)
chr7 (61-181)||(12557853-12557973)
chr7 (111-184)||(13744655-13744728)
chr7 (77-181)||(15289052-15289157)
chr7 (151-198)||(18874648-18874695)
chr7 (129-198)||(3287744-3287813)
chr7 (100-181)||(10658851-10658932)
chr7 (129-181)||(4690663-4690715)
chr7 (61-141)||(41284963-41285043)
chr7 (16-59)||(25942358-25942401)
chr7 (81-198)||(14928272-14928389)
chr7 (81-198)||(15351738-15351855)
chr7 (152-185)||(19283079-19283112)
chr7 (80-198)||(32302177-32302296)
chr7 (80-198)||(14259346-14259463)
chr7 (129-181)||(18955330-18955382)
chr7 (80-191)||(36704561-36704673)
chr7 (151-198)||(708412-708459)
chr7 (151-198)||(47095474-47095521)
chr7 (73-139)||(36685187-36685253)
chr7 (151-185)||(43276740-43276774)
chr7 (59-131)||(11054642-11054715)
chr7 (161-198)||(20488368-20488405)
chr7 (151-195)||(15575635-15575679)
chr7 (129-181)||(18990847-18990899)
chr7 (129-181)||(29052182-29052234)
chr7 (129-181)||(32160200-32160252)
[»] chr4 (33 HSPs)
chr4 (16-185)||(25091540-25091709)
chr4 (11-184)||(11425825-11425998)
chr4 (16-185)||(53630470-53630639)
chr4 (16-198)||(15115109-15115291)
chr4 (16-185)||(10356432-10356601)
chr4 (20-198)||(37019561-37019739)
chr4 (16-185)||(16998412-16998581)
chr4 (16-185)||(19610211-19610380)
chr4 (16-185)||(42875684-42875853)
chr4 (16-177)||(46001535-46001695)
chr4 (16-177)||(6633541-6633701)
chr4 (61-198)||(9924085-9924223)
chr4 (64-198)||(14549695-14549829)
chr4 (63-198)||(11478636-11478772)
chr4 (68-198)||(19434542-19434672)
chr4 (59-198)||(9870427-9870568)
chr4 (78-181)||(21144-21248)
chr4 (28-94)||(26921708-26921774)
chr4 (100-181)||(15613061-15613142)
chr4 (100-181)||(51993532-51993613)
chr4 (129-181)||(2424387-2424439)
chr4 (151-198)||(14631157-14631204)
chr4 (129-198)||(16296938-16297007)
chr4 (26-138)||(27028642-27028754)
chr4 (129-182)||(35811375-35811428)
chr4 (129-185)||(10694241-10694297)
chr4 (129-185)||(10908007-10908063)
chr4 (82-181)||(21062593-21062693)
chr4 (158-196)||(15225581-15225619)
chr4 (59-92)||(9638939-9638972)
chr4 (125-181)||(14186955-14187010)
chr4 (129-181)||(15008963-15009015)
chr4 (151-187)||(15239810-15239846)
[»] scaffold0241 (2 HSPs)
scaffold0241 (16-198)||(3069-3251)
scaffold0241 (16-123)||(2451-2558)
[»] chr6 (30 HSPs)
chr6 (16-198)||(15890695-15890877)
chr6 (16-185)||(7827859-7828028)
chr6 (16-185)||(19655227-19655396)
chr6 (16-185)||(23150283-23150452)
chr6 (16-185)||(27125473-27125642)
chr6 (16-185)||(18703451-18703624)
chr6 (16-185)||(18709386-18709559)
chr6 (31-181)||(27329981-27330131)
chr6 (31-181)||(27390721-27390871)
chr6 (81-180)||(24267801-24267900)
chr6 (21-188)||(28948466-28948634)
chr6 (20-186)||(19235015-19235180)
chr6 (63-198)||(18928614-18928750)
chr6 (57-188)||(18585733-18585864)
chr6 (20-186)||(30673397-30673556)
chr6 (20-92)||(19167926-19167998)
chr6 (80-182)||(27572121-27572223)
chr6 (63-182)||(19401028-19401147)
chr6 (59-191)||(23501601-23501734)
chr6 (120-181)||(15998880-15998941)
chr6 (77-181)||(31731904-31732009)
chr6 (80-198)||(19772649-19772767)
chr6 (26-91)||(18259262-18259328)
chr6 (100-181)||(24550168-24550249)
chr6 (129-181)||(12041620-12041672)
chr6 (158-198)||(27324695-27324735)
chr6 (111-186)||(19167848-19167923)
chr6 (158-196)||(16624833-16624871)
chr6 (129-181)||(15900654-15900706)
chr6 (80-131)||(26923709-26923761)
[»] scaffold0407 (1 HSPs)
scaffold0407 (16-185)||(11270-11439)
[»] scaffold0207 (1 HSPs)
scaffold0207 (16-191)||(13382-13557)
[»] scaffold0020 (2 HSPs)
scaffold0020 (16-195)||(143498-143677)
scaffold0020 (16-181)||(168999-169164)
[»] scaffold1283 (1 HSPs)
scaffold1283 (16-185)||(464-633)
[»] scaffold1633 (1 HSPs)
scaffold1633 (16-185)||(1092-1261)
[»] scaffold0737 (2 HSPs)
scaffold0737 (16-185)||(4710-4879)
scaffold0737 (59-177)||(5821-5941)
[»] scaffold0077 (2 HSPs)
scaffold0077 (16-185)||(34226-34395)
scaffold0077 (100-181)||(5921-6002)
[»] scaffold0001 (3 HSPs)
scaffold0001 (16-181)||(77574-77739)
scaffold0001 (16-185)||(31881-32050)
scaffold0001 (16-185)||(37188-37357)
[»] scaffold0026 (1 HSPs)
scaffold0026 (16-191)||(146610-146785)
[»] scaffold0064 (1 HSPs)
scaffold0064 (16-182)||(58633-58799)
[»] scaffold1766 (1 HSPs)
scaffold1766 (16-181)||(696-861)
[»] scaffold0111 (2 HSPs)
scaffold0111 (16-178)||(5270-5432)
scaffold0111 (21-180)||(12534-12693)
[»] scaffold0632 (1 HSPs)
scaffold0632 (16-181)||(1052-1217)
[»] chr5 (26 HSPs)
chr5 (20-198)||(20566445-20566615)
chr5 (30-177)||(7484903-7485050)
chr5 (16-181)||(21300044-21300209)
chr5 (16-167)||(19921525-19921676)
chr5 (57-198)||(36508616-36508757)
chr5 (32-181)||(31622028-31622169)
chr5 (57-181)||(31456888-31457012)
chr5 (129-191)||(6551280-6551342)
chr5 (63-191)||(21617918-21618047)
chr5 (77-191)||(20469166-20469281)
chr5 (63-182)||(22111762-22111881)
chr5 (58-112)||(17876132-17876186)
chr5 (61-141)||(31251931-31252011)
chr5 (73-181)||(10774664-10774771)
chr5 (100-181)||(10954060-10954141)
chr5 (59-131)||(21405678-21405751)
chr5 (28-77)||(22111715-22111764)
chr5 (151-191)||(18744896-18744936)
chr5 (158-196)||(10753867-10753905)
chr5 (57-91)||(30138064-30138098)
chr5 (129-182)||(266038-266091)
chr5 (73-110)||(21554366-21554403)
chr5 (129-178)||(30616614-30616663)
chr5 (129-181)||(17011728-17011780)
chr5 (78-181)||(25249828-25249931)
chr5 (78-181)||(25313612-25313715)
[»] scaffold0080 (1 HSPs)
scaffold0080 (16-185)||(21789-21958)
[»] scaffold0004 (4 HSPs)
scaffold0004 (16-181)||(328288-328455)
scaffold0004 (28-182)||(75691-75839)
scaffold0004 (26-95)||(72841-72910)
scaffold0004 (77-182)||(110121-110227)
[»] scaffold0149 (2 HSPs)
scaffold0149 (42-195)||(29559-29711)
scaffold0149 (57-191)||(21539-21673)
[»] scaffold0285 (1 HSPs)
scaffold0285 (20-186)||(19652-19810)
[»] scaffold0113 (1 HSPs)
scaffold0113 (55-198)||(35418-35559)
[»] scaffold0036 (1 HSPs)
scaffold0036 (68-185)||(78181-78298)
[»] scaffold0047 (1 HSPs)
scaffold0047 (20-185)||(78955-79105)
[»] scaffold0019 (2 HSPs)
scaffold0019 (77-185)||(24127-24235)
scaffold0019 (81-198)||(30023-30140)
[»] scaffold0037 (3 HSPs)
scaffold0037 (21-191)||(112956-113127)
scaffold0037 (63-182)||(81501-81620)
scaffold0037 (21-181)||(117807-117960)
[»] scaffold0112 (1 HSPs)
scaffold0112 (20-186)||(2787-2946)
[»] scaffold0956 (1 HSPs)
scaffold0956 (94-178)||(2520-2604)
[»] scaffold0802 (1 HSPs)
scaffold0802 (61-198)||(4692-4830)
[»] scaffold0040 (1 HSPs)
scaffold0040 (57-198)||(106034-106175)
[»] scaffold0230 (1 HSPs)
scaffold0230 (57-188)||(6678-6809)
[»] scaffold0174 (3 HSPs)
scaffold0174 (26-177)||(5167-5310)
scaffold0174 (26-177)||(11287-11430)
scaffold0174 (27-141)||(19605-19718)
[»] scaffold0083 (2 HSPs)
scaffold0083 (21-181)||(10755-10913)
scaffold0083 (106-181)||(5045-5120)
[»] scaffold0628 (1 HSPs)
scaffold0628 (13-181)||(1058-1226)
[»] scaffold0100 (1 HSPs)
scaffold0100 (30-186)||(26629-26779)
[»] scaffold0075 (1 HSPs)
scaffold0075 (78-181)||(60843-60947)
[»] scaffold0175 (2 HSPs)
scaffold0175 (59-191)||(8571-8704)
scaffold0175 (26-138)||(18744-18856)
[»] scaffold0156 (1 HSPs)
scaffold0156 (57-175)||(16532-16650)
[»] scaffold0379 (1 HSPs)
scaffold0379 (64-182)||(10741-10851)
[»] scaffold0008 (1 HSPs)
scaffold0008 (60-192)||(135493-135625)
[»] scaffold0056 (1 HSPs)
scaffold0056 (69-189)||(67060-67181)
[»] scaffold0028 (1 HSPs)
scaffold0028 (59-191)||(3042-3174)
[»] scaffold0010 (1 HSPs)
scaffold0010 (78-181)||(126305-126407)
[»] scaffold0261 (1 HSPs)
scaffold0261 (28-94)||(6620-6686)
[»] scaffold0848 (1 HSPs)
scaffold0848 (59-131)||(2071-2143)
[»] scaffold0251 (1 HSPs)
scaffold0251 (64-191)||(20076-20202)
[»] scaffold0123 (1 HSPs)
scaffold0123 (59-181)||(7205-7329)
[»] scaffold0032 (1 HSPs)
scaffold0032 (129-181)||(61848-61900)
[»] scaffold0205 (1 HSPs)
scaffold0205 (82-198)||(30607-30723)
[»] scaffold0671 (1 HSPs)
scaffold0671 (78-181)||(4888-4992)
[»] scaffold0589 (1 HSPs)
scaffold0589 (78-181)||(4333-4437)
[»] scaffold0439 (1 HSPs)
scaffold0439 (58-137)||(12323-12403)
[»] scaffold0203 (1 HSPs)
scaffold0203 (129-181)||(17940-17992)
[»] scaffold0003 (1 HSPs)
scaffold0003 (78-186)||(96347-96455)
[»] scaffold0002 (1 HSPs)
scaffold0002 (78-181)||(398510-398614)
[»] scaffold1186 (1 HSPs)
scaffold1186 (151-198)||(2042-2089)
[»] scaffold0005 (1 HSPs)
scaffold0005 (151-198)||(186179-186226)
[»] scaffold0256 (1 HSPs)
scaffold0256 (111-173)||(1855-1917)
[»] scaffold0220 (2 HSPs)
scaffold0220 (100-181)||(19924-20006)
scaffold0220 (59-92)||(13878-13911)
[»] scaffold0041 (1 HSPs)
scaffold0041 (127-176)||(5712-5761)
[»] scaffold1256 (1 HSPs)
scaffold1256 (129-181)||(2200-2252)
[»] scaffold0859 (1 HSPs)
scaffold0859 (59-143)||(4612-4696)
[»] scaffold0213 (1 HSPs)
scaffold0213 (129-177)||(19207-19255)
[»] scaffold0071 (1 HSPs)
scaffold0071 (129-181)||(15272-15324)
[»] scaffold0065 (1 HSPs)
scaffold0065 (78-181)||(52544-52648)
[»] scaffold0098 (1 HSPs)
scaffold0098 (151-198)||(40129-40176)
[»] scaffold0819 (1 HSPs)
scaffold0819 (73-181)||(5311-5418)
[»] scaffold0007 (1 HSPs)
scaffold0007 (54-115)||(158888-158949)
[»] scaffold0516 (1 HSPs)
scaffold0516 (133-181)||(5305-5353)
[»] scaffold0630 (1 HSPs)
scaffold0630 (151-198)||(9085-9132)
[»] scaffold1128 (1 HSPs)
scaffold1128 (80-141)||(448-510)
[»] scaffold0577 (1 HSPs)
scaffold0577 (73-139)||(9004-9070)
[»] scaffold0601 (1 HSPs)
scaffold0601 (149-182)||(195-228)
[»] scaffold0328 (1 HSPs)
scaffold0328 (59-92)||(18731-18764)
[»] scaffold0034 (1 HSPs)
scaffold0034 (80-196)||(120905-121021)
[»] scaffold0017 (1 HSPs)
scaffold0017 (78-123)||(568-613)
[»] scaffold0625 (1 HSPs)
scaffold0625 (129-181)||(5861-5913)
[»] scaffold0515 (1 HSPs)
scaffold0515 (129-181)||(5029-5081)
[»] scaffold0462 (1 HSPs)
scaffold0462 (129-181)||(11223-11275)
[»] scaffold0436 (1 HSPs)
scaffold0436 (129-181)||(8960-9012)
[»] scaffold0308 (1 HSPs)
scaffold0308 (59-131)||(13370-13442)
[»] scaffold0306 (1 HSPs)
scaffold0306 (129-181)||(5029-5081)
[»] scaffold0180 (1 HSPs)
scaffold0180 (59-115)||(28395-28451)
[»] scaffold0138 (2 HSPs)
scaffold0138 (129-181)||(21097-21149)
scaffold0138 (129-181)||(34112-34164)
[»] scaffold0116 (1 HSPs)
scaffold0116 (59-131)||(35514-35586)
[»] scaffold0057 (1 HSPs)
scaffold0057 (129-181)||(69853-69905)
[»] scaffold0042 (1 HSPs)
scaffold0042 (82-181)||(29340-29440)


Alignment Details
Target: chr8 (Bit Score: 164; Significance: 1e-87; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 7 - 198
Target Start/End: Complemental strand, 20083812 - 20083621
Alignment:
Q  7 atgagatggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactaca 106  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20083812 atgatatgaacatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactaca 20083713  T
Q  107 acctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  20083712 acctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttacactgatcgacgaagga 20083621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 177
Target Start/End: Complemental strand, 6573221 - 6573060
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  6573221 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctcattcccaaattcccataactacaacctacaac 6573122  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttac 177  Q
    |||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||    
T  6573121 atgctaaactcaatttcaaaattatacaacttagaattagagaaagttagtctcacccttac 6573060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 42818072 - 42817903
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  42818072 acatcaattctacacaaattcaacggattttctactttattaacaaccaattacaacttcaaaatctaatttccaaattcccataactacaacctacaac 42817973  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || |||||||||||||| |||| |||||||||||||||||    
T  42817972 atgctaaactcaatttcagaattatacaacttagaattagagaaagtaagtcccacccttaccttaaatt 42817903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 5082377 - 5082226
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5082377 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 5082278  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtc 167  Q
    |||||||||||||||||| |||||||||| || |||||||||||||||||||    
T  5082277 atgctaaactcaatttcataattatacaacttagaattagagaaagttagtc 5082226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 23 - 185
Target Start/End: Original strand, 19140659 - 19140820
Alignment:
Q  23 ttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaa 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  19140659 ttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacttgctaa 19140758  T
Q  123 actcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    |||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||    
T  19140759 actcaatttcagaattatacaacttagaattagagaaag-tagtcccacccttaccttaaatt 19140820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 5761421 - 5761585
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5761421 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 5761520  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||||||||||||| |||||||| | || ||||||||||||||||||| |||||||||||||    
T  5761521 atgctaaactcaatttcaaaattatac-acttagaattagagaaagttagtcccacccttacctta 5761585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 6101918 - 6101743
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||| ||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||    
T  6101918 acatcaatactacacaaattcaatagattttctactctattaacaaccaattataacttcaaaacctgattcccaaattcccataactacaacctacaac 6101819  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcga 191  Q
    ||||||||| ||||||||||||||||||| || ||||||||||||||||||| |||| |||||||| |||||||||    
T  6101818 atgctaaacacaatttcagaattatacaacttagaattagagaaagttagtcccacctttaccttagattgatcga 6101743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 6202664 - 6202824
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6202664 acatcacttctac-caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 6202762  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttac 177  Q
    |||| ||| ||||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  6202763 atgcaaaattcaatttcagaattatacaacgtagaattagagaaagttagtctcacccttac 6202824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 39936175 - 39936003
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctac--- 112  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||       
T  39936175 acatcaattgtacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcgcaaattcccataactacaacctacaac 39936076  T
Q  113 aacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||| |||||||||| || |||||||||||||||| || |||||||||||||||||    
T  39936075 aacatgctaaactcaatttcataattatacaacttagaattagagaaagttaatcccacccttaccttaaatt 39936003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 37292593 - 37292753
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37292593 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 37292691  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttac 177  Q
    |||||||||| ||||||||||||||||||  | ||||||||||||||||||| |||||||||    
T  37292692 atgctaaacttaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 37292753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 20178704 - 20178581
Alignment:
Q  7 atgagatggacatcaattctacacaaattcaacggattttctactctattaacaaccaatt-acaacttcaaaacctaattcccaaattctcataactac 105  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20178704 atgatatgaacatcaattctacacaaattcaacgaattttctactctattaacaaccaatttacaacttcaaaacctaattcccaaattctcataactac 20178605  T
Q  106 aacctacaaca-tgctaaactcaa 128  Q
    ||||||||||| ||||||||||||    
T  20178604 aacctacaacattgctaaactcaa 20178581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 27 - 186
Target Start/End: Complemental strand, 20397656 - 20397505
Alignment:
Q  27 acacaaattcaacggattttctactctattaacaacc-aattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaact 125  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||     |||||    |||||||||||||    
T  20397656 acacaaattcaatggattttctactctattaacaacctaattacaactttaaaacctaattcccaaaatcaca-----acaac----aacatgctaaact 20397566  T
Q  126 caatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattg 186  Q
    ||||||||||||||||||| || |||||||||||||||| || ||||||||||||| ||||    
T  20397565 caatttcagaattatacaacttagaattagagaaagttaatcccacccttaccttagattg 20397505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 198
Target Start/End: Complemental strand, 31722661 - 31722476
Alignment:
Q  13 tggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctac 112  Q
    ||||||| |||||||||  |||||||| ||||| |||||||   | ||||||||||||||||| ||||| |||| |||||||| || |||||||||||||    
T  31722661 tggacattaattctacatcaattcaacagattt-ctactcttaaatcaaccaattacaacttctaaaccaaatttccaaattcccaaaactacaacctac 31722563  T
Q  113 aacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||| || |||| || |||| || |||||||| | || ||||||||||||||||||| |||||||| |||| ||||||||||||||||    
T  31722562 aacttgttaaattcgattttcaaaattataccacttagaattagagaaagttagtcccacccttatcttagattgatcgacgaagga 31722476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 59 - 191
Target Start/End: Complemental strand, 45469342 - 45469209
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagag 157  Q
    ||||||||||||||||| |||| |||||||||||||  || ||||| |||||||||| || |||| || |||| ||||||||||| | || |||||||||    
T  45469342 caaccaattacaacttctaaacataattcccaaatttacaaaactataacctacaacttgttaaattcgattttcagaattataccacttagaattagag 45469243  T
Q  158 aaagttagtctcacccttaccttaaattgatcga 191  Q
    |||||||||||||||||||||||| |||||||||    
T  45469242 aaagttagtctcacccttaccttagattgatcga 45469209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 188
Target Start/End: Complemental strand, 22532292 - 22532125
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgct 120  Q
    |||||||||| ||||||||  |||||||||| |   ||||| ||||||||||||  ||||||||||||||| ||  || ||||||||||||| || || |    
T  22532292 aattctacaccaattcaacaaattttctactattaaaacaatcaattacaacttttaaacctaattcccaattttccaaaactacaacctaccacctgtt 22532193  T
Q  121 aaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgat 188  Q
    |||  || ||||||||| |||||| || ||||||||||||||||||| ||||||||||||| ||||||    
T  22532192 aaatccagtttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgat 22532125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 188
Target Start/End: Complemental strand, 22536977 - 22536810
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgct 120  Q
    |||||||||| ||||||||  |||||||||| |   ||||| ||||||||||||  ||||||||||||||| ||  || ||||||||||||| || || |    
T  22536977 aattctacaccaattcaacaaattttctactattaaaacaatcaattacaacttttaaacctaattcccaattttccaaaactacaacctaccacctgtt 22536878  T
Q  121 aaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgat 188  Q
    |||  || ||||||||| |||||| || ||||||||||||||||||| ||||||||||||| ||||||    
T  22536877 aaatccagtttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgat 22536810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 36727151 - 36727028
Alignment:
Q  69 caacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtc 167  Q
    ||||||| ||||||||||| ||||| |  | |||||||||||||||| || ||||  |||||| ||||||||||| | || |||||||||||||||||||    
T  36727151 caacttctaaacctaattctcaaatcccaaaaactacaacctacaacttgttaaatccaattttcagaattataccacttagaattagagaaagttagtc 36727052  T
Q  168 tcacccttaccttaaattgatcga 191  Q
    |||||||||||||| |||||||||    
T  36727051 tcacccttaccttagattgatcga 36727028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 177
Target Start/End: Complemental strand, 39694437 - 39694281
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgct 120  Q
    |||||||||| |||||||| |||| |||||| |    ||||| ||||||||| || || |||||||||||||||| || |||||||||||||||| || |    
T  39694437 aattctacaccaattcaacagattctctactattacgacaactaattacaacgtctaaccctaattcccaaattcccaaaactacaacctacaacttgtt 39694338  T
Q  121 aaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttac 177  Q
    |||  || ||||||||| |||||| ||  |||||||||||| ||||| | |||||||    
T  39694337 aaatccagtttcagaatcatacaacttataattagagaaagctagtcacgcccttac 39694281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 20022155 - 20022040
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagag 157  Q
    ||||||||||||||||| ||||||||||||||||        ||||||||||||||| || |||| || |||| ||||||||||| | || |||||||||    
T  20022155 caaccaattacaacttctaaacctaattcccaaa--------actacaacctacaacttgttaaattcgattttcagaattataccacttagaattagag 20022064  T
Q  158 aaagttagtctcacccttacctta 181  Q
    |||||||||| |||||||||||||    
T  20022063 aaagttagtcccacccttacctta 20022040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 188
Target Start/End: Complemental strand, 22318033 - 22317904
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattagag 157  Q
    ||||||||||||||||| |||||||| |||||||||| |  |||||||||||| ||| || |||| |||| ||||||||| |||| | || ||||||| |    
T  22318033 caaccaattacaacttctaaacctaaatcccaaattcccgaaactacaacctagaacctgttaaattcaattttcagaatcatac-acttagaattagtg 22317935  T
Q  158 aaagttagtctcacccttaccttaaattgat 188  Q
    || ||||||| ||||||||||||| ||||||    
T  22317934 aaggttagtcccacccttaccttagattgat 22317904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 181
Target Start/End: Complemental strand, 17906953 - 17906849
Alignment:
Q  77 aaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    ||||||||||| ||||| | ||  ||||||||||||||| || ||||  || ||||||||| |||||| || ||||||||||||||||||| ||||||||    
T  17906953 aaacctaattctcaaatccccaacactacaacctacaacttgttaaatccagtttcagaatcatacaacttagaattagagaaagttagtcccaccctta 17906854  T
Q  177 cctta 181  Q
    |||||    
T  17906853 cctta 17906849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 23900100 - 23899977
Alignment:
Q  69 caacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatt-tcagaattatacaaatttgaattagagaaagttagtc 167  Q
    ||||||| ||||||| ||| ||||| | || ||||||| |||||||| || |||| |||||| ||||| |||||  | || |||||||||||||||||||    
T  23900100 caacttctaaacctagttctcaaatccccaaaactacagcctacaacttgttaaattcaattctcagagttatatcacttagaattagagaaagttagtc 23900001  T
Q  168 tcacccttaccttaaattgatcga 191  Q
     ||||||||||||| |||||||||    
T  23900000 acacccttaccttagattgatcga 23899977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 4380669 - 4380617
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||||||||||| || ||||||||||||||||||| |||||||||||||    
T  4380669 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 4380617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 18761448 - 18761504
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    |||||||||||||| | || ||||||||||||||||||| |||||||||||||||||    
T  18761448 tttcagaattataccacttagaattagagaaagttagtcgcacccttaccttaaatt 18761504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 19700109 - 19700213
Alignment:
Q  78 aacctaattcccaaattctcataactacaacctacaacatgctaaactcaatt-tcagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    |||||||| | ||||| |||| ||||||||||||||||||| ||||  | ||| | |||||||||||| || |||||| |||| ||||||| ||||||||    
T  19700109 aacctaatcctcaaatcctcaaaactacaacctacaacatgttaaatccgattcttagaattatacaacttagaattaaagaaggttagtcccaccctta 19700208  T
Q  177 cctta 181  Q
    |||||    
T  19700209 cctta 19700213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 23889784 - 23889851
Alignment:
Q  114 acatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||| |||| ||||||||||||||||||||  | |||||||||||||||| ||||||||||| ||||    
T  23889784 acatgttaaattcaatttcagaattatacaacctagaattagagaaagttaatctcacccttagctta 23889851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 182
Target Start/End: Original strand, 17218649 - 17218755
Alignment:
Q  77 aaacctaattcccaaattctcataactacaacctacaacatgctaaa-ctcaatttcagaattatacaaatttgaattagagaaagttagtctcaccctt 175  Q
    ||||||||||| ||||| |||| ||| |||||||||||  ||||||| || | |||||||||||||  | || ||| ||||||||||||||| |||||||    
T  17218649 aaacctaattctcaaatcctcaaaacaacaacctacaaattgctaaatctaattttcagaattataatacttagaactagagaaagttagtcccaccctt 17218748  T
Q  176 accttaa 182  Q
    | |||||    
T  17218749 atcttaa 17218755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 42265631 - 42265559
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt 131  Q
    |||||| || ||||||| || |||||||||||||||| || |||||||||||||||| || |||| |||||||    
T  42265631 caaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattt 42265559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 36305837 - 36305908
Alignment:
Q  111 acaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaa 182  Q
    ||||||||||||||||||||||| ||||||||||  |  ||||| ||||||||| || ||||||||| ||||    
T  36305837 acaacatgctaaactcaatttcataattatacaacctaaaattaaagaaagttaatcacacccttacgttaa 36305908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 18816324 - 18816278
Alignment:
Q  152 ttagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||||    
T  18816324 ttagagaaagctagtcccacccttaccttatattgatcgacgaagga 18816278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 23419411 - 23419493
Alignment:
Q  100 aactacaacctacaacatgctaaactcaatt-tcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||| ||||||| ||| ||||  ||||| |||||||||||||| || |||||| |||| ||||||| |||||||||||||    
T  23419411 aactacatcctacaatatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 23419493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 23948211 - 23948315
Alignment:
Q  78 aacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    |||||||||| ||||| | || |||||||||||||||| || ||||  || ||| |||||| |||||| || |||||| |||| ||||||  ||||||||    
T  23948211 aacctaattctcaaatccccaaaactacaacctacaacttgttaaatccacttttcagaatcatacaacttagaattaaagaaggttagtaccaccctta 23948310  T
Q  177 cctta 181  Q
    |||||    
T  23948311 cctta 23948315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 22583727 - 22583660
Alignment:
Q  114 acatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||| |||| ||||||||||||||||||||  | |||||| |||| |||| || |||||||||||||    
T  22583727 acatgttaaattcaatttcagaattatacaacctagaattaaagaatgttaatcccacccttacctta 22583660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 185
Target Start/End: Complemental strand, 22258336 - 22258302
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||| |||||||||||||||||||||||    
T  22258336 attagagaaagctagtctcacccttaccttaaatt 22258302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 3273819 - 3273892
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattctcataactacaacctacaacatgctaaactcaattt 131  Q
    |||||||| |||||||| || ||||||| ||||||||| || |||||||||| ||||| || |||| |||||||    
T  3273819 caaccaatcacaacttctaaccctaatttcccaaattcccaaaactacaacccacaacctgttaaattcaattt 3273892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 22254741 - 22254818
Alignment:
Q  105 caacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||| || ||||  |||||| ||||||||||  | || ||||||||||||||||||| |||| ||||||||    
T  22254741 caacctacaacttgttaaatccaattttcagaattataacacttagaattagagaaagttagtcccaccattacctta 22254818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Complemental strand, 17158995 - 17158963
Alignment:
Q  149 gaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||||||||||| |||||||||||||    
T  17158995 gaattagagaaagttagtcccacccttacctta 17158963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 19880842 - 19880874
Alignment:
Q  149 gaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||||||||||| |||||||||||||    
T  19880842 gaattagagaaagttagtcccacccttacctta 19880874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 181
Target Start/End: Original strand, 23479102 - 23479134
Alignment:
Q  149 gaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||||||||||| |||||||||||||    
T  23479102 gaattagagaaagttagtcccacccttacctta 23479134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 26454708 - 26454760
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||| |  | || ||||||||||||||||||| |||||||||||||    
T  26454708 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 26454760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 163; Significance: 4e-87; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 40807883 - 40808065
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40807883 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 40807982  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  40807983 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattgatcgacgaagga 40808065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 40812720 - 40812895
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40812720 acatcaattctacacaaattcaacggattttctactctattaacaatcaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 40812819  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcga 191  Q
    ||||||||||||||||||||||||| ||| || ||||||||||||||||||| ||||||||||||| |||||||||    
T  40812820 atgctaaactcaatttcagaattatgcaacttagaattagagaaagttagtcccacccttaccttagattgatcga 40812895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 44274305 - 44274487
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||    
T  44274305 acatcaattctacacaaattcaatgaattttctactctattaacaaccaattacaacttcaaaatataattcccaaattcccataactacaacctacaac 44274404  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  44274405 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattgatcgacgaagga 44274487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 49900608 - 49900782
Alignment:
Q  7 atgagatggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactaca 106  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  49900608 atgatatgaacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactaca 49900707  T
Q  107 acctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||| |||||||||||||    
T  49900708 acctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaaattagtcccacccttacctta 49900782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 17044853 - 17045022
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17044853 acatcaattctacacaaattcaacaaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17044952  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  17044953 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 17045022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 11259318 - 11259487
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11259318 acatcacttctacacaaattcaacggattttctactttattaacaatcaattacaacttcaaaacctaattcccaaattctcataactacaatctacaac 11259417  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    |||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  11259418 atgctaaattcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 11259487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 17047013 - 17047182
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  17047013 acatcaattctacacaaattcaacggattttttactctattaacaaccaattacaacttcaaaacttaattcccaaattcaaataactacaacctacaac 17047112  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  17047113 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 17047182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 17519038 - 17518873
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17519038 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17518939  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    || ||||| |||||||||||||||||||| || ||||||||||||||||||| ||||||| |||||    
T  17518938 attctaaagtcaatttcagaattatacaacttagaattagagaaagttagtcccacccttgcctta 17518873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 17533900 - 17533735
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17533900 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17533801  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    || ||||| |||||||||||||||||||| || ||||||||||||||||||| ||||||| |||||    
T  17533800 attctaaagtcaatttcagaattatacaacttagaattagagaaagttagtcccacccttgcctta 17533735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 22306736 - 22306579
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactca 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  22306736 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcacaaattcccataactacaacctacaacatgctaaactca 22306637  T
Q  128 atttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  22306636 atttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 22306579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 17538993 - 17539162
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  17538993 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacatcttcaaaacctaatttccaaattcccataactacaacctacaac 17539092  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||| |||| |||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||    
T  17539093 atgataaaatcaatttcagaattatacaacttagaattagataaagttagtctcacccttaccttaaatt 17539162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 10563596 - 10563777
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||    
T  10563596 acatcaattctac-caaattcaacggcttttctactctattaacaaccaattacaacttcaaaacctaattcccaaatttccataactacaaactacaac 10563694  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    |||||||||||||||||| |||||||||| ||  |||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  10563695 atgctaaactcaatttcataattatacaacttaaaattagagaaagttagtcccaccattaccttagattgatcgacgaagga 10563777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 17693954 - 17694123
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||| ||||||  |||||||||||||||||||    
T  17693954 acatcaattctacacaaattcaacggattttctactctattaacgatcaattacaacttcaaaatctaattcacaaatttccataactacaacctacaac 17694053  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    |||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||| |||||||    
T  17694054 atgctaaactcaattttagaattatacaacttagaattagagaaagttagtctcacccttacattaaatt 17694123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 18 - 185
Target Start/End: Complemental strand, 41172534 - 41172367
Alignment:
Q  18 atcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacat 117  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  41172534 atcaattctacacaaattcaacaaattttctactctattaacaaccaattacaacttcaaaacctaattccctaattcccataactacaacctacaacat 41172435  T
Q  118 gctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    |||||||||||||||||| |||||||| ||  || ||||||||||||||| |||||||||||||||||    
T  41172434 gctaaactcaatttcagagttatacaacttataagtagagaaagttagtcccacccttaccttaaatt 41172367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 166
Target Start/End: Complemental strand, 50348191 - 50348041
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  50348191 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 50348092  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagt 166  Q
    |||||||||||||||| | |||||||||| || ||||||||||||||||||    
T  50348091 atgctaaactcaattttaaaattatacaacttagaattagagaaagttagt 50348041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 10311415 - 10311575
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10311415 acatcacttctac-caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 10311513  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttac 177  Q
    |||| ||| ||||||||||||||||||||  | ||||||||||||||||||| |||||||||    
T  10311514 atgcaaaattcaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 10311575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 35354489 - 35354658
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  35354489 acatcaattctacacaaattcaacggattttctactctaccaacaatcaattacaacttcaaaacctaatttccaaattcccataactacaaccaacaac 35354588  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||||||||| ||| |||| ||||||||    
T  35354589 atgctaaactcaatttcagaattatacaacttaaaattagagaaagttagtcccacacttagcttaaatt 35354658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 15931672 - 15931504
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||  |||||||||||| |||||||||||| |||||||||||||||||||||| |||    
T  15931672 acatcaattctacacaaattcaacgaattttctactctattaataattaattacaacttcgaaacctaattccaaaattctcataactacaacctaaaac 15931573  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||| ||||||||||||||| | || |||||||||||||||||||||||| ||||||||||||    
T  15931572 atgctaaactctatttcagaattatac-acttagaattagagaaagttagtctcacctttaccttaaatt 15931504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 32 - 185
Target Start/End: Original strand, 14508749 - 14508903
Alignment:
Q  32 aattcaacggattttctactctattaacaaccaattacaacttc-aaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatt 130  Q
    |||||| | |||| |||||||| |  |||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||| |||||||    
T  14508749 aattcatcagattatctactctttctacaaccaattacaacttccaaaacctaattccaaaattcccataactacaacctacaacatgctaacctcaatt 14508848  T
Q  131 tcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| ||||||    
T  14508849 tcagaattatacaacttagaattagagaaagttagtctcacccttaccataaatt 14508903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 19568368 - 19568191
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgct 120  Q
    ||||||||||  |||||||||||| |||||| |   ||| ||||||||||||||| || |||||||||||||||| || |||||||||||||||| || |    
T  19568368 aattctacaccgattcaacggattctctactattacaactaccaattacaacttctaaccctaattcccaaattcccaaaactacaacctacaacctgtt 19568269  T
Q  121 aaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    |||   | ||||||||| |||||| || ||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  19568268 aaatctagtttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttagattgatcgacgaagga 19568191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 61 - 198
Target Start/End: Original strand, 33565018 - 33565156
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaa 159  Q
    ||||||||||||||| |||||||||| |||||||| || |||| ||||||||||| || |||| ||||||| ||||||||||| | || |||||||||||    
T  33565018 accaattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaa 33565117  T
Q  160 agttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  33565118 agttagtcacacccttaccttagattgatcgacgaagga 33565156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 64 - 156
Target Start/End: Complemental strand, 35064658 - 35064566
Alignment:
Q  64 aattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattaga 156  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||    
T  35064658 aattacaacttcaaaacctaattcccaaatttccataactacaacctacaacatgctaaactcaatttcaaaattatacaacttagaattaga 35064566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 21 - 188
Target Start/End: Complemental strand, 9511076 - 9510909
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgct 120  Q
    ||||||| || || ||||| ||||||||||| |   ||||||||||||||||||| ||||||||||| ||||||| || |||||||| |||| || || |    
T  9511076 aattctaaacgaaatcaacagattttctactattaaaacaaccaattacaacttctaaacctaattctcaaattcccaaaactacaatctaccacctgtt 9510977  T
Q  121 aaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgat 188  Q
    |||  || ||||||||| |||||| || |||||||||||||||||| |||||||||||||| ||||||    
T  9510976 aaatccagtttcagaatcatacaacttagaattagagaaagttagtttcacccttaccttagattgat 9510909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 21 - 188
Target Start/End: Complemental strand, 9519051 - 9518884
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgct 120  Q
    ||||||| || || ||||| ||||||||||| |   ||||||||||||||||||| ||||||||||| ||||||| || |||||||| |||| || || |    
T  9519051 aattctaaacgaaatcaacagattttctactattaaaacaaccaattacaacttctaaacctaattctcaaattcccaaaactacaatctaccacctgtt 9518952  T
Q  121 aaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgat 188  Q
    |||  || ||||||||| |||||| || |||||||||||||||||| |||||||||||||| ||||||    
T  9518951 aaatccagtttcagaatcatacaacttagaattagagaaagttagtttcacccttaccttagattgat 9518884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 61 - 198
Target Start/End: Complemental strand, 35961049 - 35960911
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaa 159  Q
    ||||||||||||||| |||||||||| |||||||  || |||| ||||||||||| || |||| ||||||| ||||||||||| |  | |||||||||||    
T  35961049 accaattacaacttctaaacctaatttccaaatttccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacatagaattagagaa 35960950  T
Q  160 agttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||| || ||||||||||||| ||||||||||||||||    
T  35960949 agttaatcccacccttaccttagattgatcgacgaagga 35960911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 42324094 - 42323954
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattagag 157  Q
    ||||||||||||||||| || ||||||| |||||||| || |||||||||||||||||||  ||| |||| |||||||||||||||| ||  ||||| |     
T  42324094 caaccaattacaacttctaaccctaatttccaaattcccaaaactacaacctacaacatgtcaaattcaattttcagaattatacaacttaaaattaaat 42323995  T
Q  158 aaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    || ||||||| ||||||||||||| | ||||||||||||||    
T  42323994 aatgttagtcccacccttaccttagactgatcgacgaagga 42323954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 181
Target Start/End: Original strand, 16050875 - 16050979
Alignment:
Q  77 aaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    ||||||||||| ||||| |||| ||||||||| |||||| || ||||| |||||||||||| |||||| || ||||||||||||||||||| ||||||||    
T  16050875 aaacctaattctcaaatcctcaaaactacaacatacaacttgttaaacccaatttcagaatcatacaacttagaattagagaaagttagtcccaccctta 16050974  T
Q  177 cctta 181  Q
    |||||    
T  16050975 cctta 16050979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 35064745 - 35064681
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaac 80  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35064745 acatcaattctacacaaattcaacggattttctactatattaacaaccaattacaacttcaaaac 35064681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 181
Target Start/End: Original strand, 11563654 - 11563777
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaa-ctcaatttcagaattatacaaatttgaattagag 157  Q
    ||||||||||||||||  ||||||||||||||||||| || |||||||||||||||| || ||||  | | |||||||||||||| | || |||||||||    
T  11563654 caaccaattacaacttttaaacctaattcccaaattcccaaaactacaacctacaacttgttaaatttgattttcagaattataccacttagaattagag 11563753  T
Q  158 aaagttagtctcacccttacctta 181  Q
    || ||||||| |||||||||||||    
T  11563754 aaggttagtcccacccttacctta 11563777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 5200335 - 5200277
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaactt 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5200335 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaactt 5200277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 118 - 185
Target Start/End: Original strand, 17541423 - 17541490
Alignment:
Q  118 gctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  17541423 gctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 17541490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 49968981 - 49968858
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattagag 157  Q
    ||||||||||||||||  |||||||||||||||||||||| |||||||| ||||||| || |||| |||| ||||||||| |||| | || ||||||| |    
T  49968981 caaccaattacaacttataaacctaattcccaaattctcaaaactacaagctacaacctgttaaattcaattttcagaatcatac-acttagaattagtg 49968883  T
Q  158 aaagttagtctcacccttaccttaa 182  Q
    || ||||||| ||| ||||||||||    
T  49968882 aaggttagtcccactcttaccttaa 49968858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 13185834 - 13185957
Alignment:
Q  69 caacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttc-agaattatacaaatttgaattagagaaagttagtc 167  Q
    ||||||| ||||||||||||||||||  || |||||||||||||||| || |||| || ||||  |||||||||  | ||  ||||||||||||||||||    
T  13185834 caacttctaaacctaattcccaaatttccaaaactacaacctacaacttgttaaattcgatttttagaattatatcacttaaaattagagaaagttagtc 13185933  T
Q  168 tcacccttaccttaaattgatcga 191  Q
     ||||||||||||| |||||||||    
T  13185934 ccacccttaccttagattgatcga 13185957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 198
Target Start/End: Complemental strand, 22758935 - 22758817
Alignment:
Q  80 cctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcacccttacc 178  Q
    |||||||||||||| |||| ||||| ||||||||||||| ||||  |||||| |||||||| |  | || ||||||  ||| ||||||||||||||||||    
T  22758935 cctaattcccaaatcctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggttagtctcacccttacc 22758837  T
Q  179 ttaaattgatcgacgaagga 198  Q
    ||  ||||||||||||||||    
T  22758836 ttggattgatcgacgaagga 22758817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 181
Target Start/End: Complemental strand, 24177840 - 24177736
Alignment:
Q  77 aaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    |||| |||||||||||||  || ||||||||||||| || |  ||||  || |||||||||||||||| ||  |||||||||||||| ||| ||||||||    
T  24177840 aaacataattcccaaatttccaaaactacaacctaccacctattaaatccagtttcagaattatacaacttataattagagaaagtttgtcccaccctta 24177741  T
Q  177 cctta 181  Q
    |||||    
T  24177740 cctta 24177736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 178
Target Start/End: Complemental strand, 11885658 - 11885560
Alignment:
Q  80 cctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcacccttacc 178  Q
    |||||||| ||||||| || |||||||||||||||| || ||||  |||||| ||||||||||  | || ||||||||||||||||||| ||||||||||    
T  11885658 cctaattctcaaattccca-aactacaacctacaacttgttaaatccaattttcagaattataacacttagaattagagaaagttagtcccacccttacc 11885560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 37038978 - 37039065
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaa 144  Q
    ||||||||||||||||  || ||||||| ||||||||| || ||||||||||||||||||| ||||  ||| ||||||||||||||||    
T  37038978 caaccaattacaacttttaaccctaatttcccaaattcccaaaactacaacctacaacatgttaaatccaattttcagaattatacaa 37039065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 5200284 - 5200226
Alignment:
Q  140 tacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||| || ||||||||||||||||||| ||||||||||||| || |||||||||||||    
T  5200284 tacaacttagaattagagaaagttagtcccacccttaccttagatggatcgacgaagga 5200226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 12509431 - 12509350
Alignment:
Q  100 aactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||| ||||| ||||| ||||  ||||||||||||||||||| || |||||| |||| ||| ||| |||||||||||||    
T  12509431 aactacatcctaccacatgttaaatccaatttcagaattatacaacttagaattaaagaaggtttgtcccacccttacctta 12509350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 15446920 - 15446868
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||| |||||| || ||||||||||||||||||| |||||||||||||    
T  15446920 tttcagaataatacaacttagaattagagaaagttagtcccacccttacctta 15446868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 15566744 - 15566792
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttac 177  Q
    |||||||||||||||| || ||||||||||||||||||| |||||||||    
T  15566744 tttcagaattatacaacttagaattagagaaagttagtcccacccttac 15566792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 6156732 - 6156779
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||||||||    
T  6156732 attagagaaagctagtcccacccttaccttagattgatcgacgaagga 6156779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 36528851 - 36528919
Alignment:
Q  113 aacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||| ||||| |||| |||||||||||  | || |||||||||||||||| || |||||||||||||    
T  36528851 aacatgttaaacccaatctcagaattatattacttagaattagagaaagttaatcccacccttacctta 36528919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 2841536 - 2841489
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||| ||||| ||||||||||||| |||||||||| |||||    
T  2841536 attagagaaagctagtcacacccttaccttagattgatcgacaaagga 2841489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 5215669 - 5215716
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||| ||||  ||||||||||||| ||||||||||||||||    
T  5215669 attagagaaagctagtgccacccttaccttatattgatcgacgaagga 5215716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 14520468 - 14520515
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    |||| |||||| ||||| ||||||||||||| ||||||||||||||||    
T  14520468 attaaagaaagctagtcccacccttaccttagattgatcgacgaagga 14520515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 9707268 - 9707230
Alignment:
Q  158 aaagttagtctcacccttaccttaaattgatcgacgaag 196  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  9707268 aaagttagtctcacccttaccttggattgatcgacgaag 9707230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 16749597 - 16749559
Alignment:
Q  158 aaagttagtctcacccttaccttaaattgatcgacgaag 196  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  16749597 aaagttagtctcacccttaccttggattgatcgacgaag 16749559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 17208524 - 17208586
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcga 191  Q
    |||||||||||||||| |    ||||||||||| ||||| ||||||||||||| |||||||||    
T  17208524 tttcagaattatacaactcattattagagaaagctagtcccacccttaccttagattgatcga 17208586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 19776302 - 19776340
Alignment:
Q  158 aaagttagtctcacccttaccttaaattgatcgacgaag 196  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  19776302 aaagttagtctcacccttaccttggattgatcgacgaag 19776340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 31223952 - 31223887
Alignment:
Q  73 ttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaatta 139  Q
    |||||| |||||||||||||||| || |||||||||||||||| || ||||  || |||||||||||    
T  31223952 ttcaaaccctaattcccaaattc-caaaactacaacctacaacctgttaaatccagtttcagaatta 31223887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 45530725 - 45530652
Alignment:
Q  59 caaccaattacaacttcaaaacctaa-ttcccaaattctcataactacaacctacaacatgctaaactcaattt 131  Q
    ||||||||||||||||| || ||||| ||| ||||||| || |||||||||| ||||| || |||| |||||||    
T  45530725 caaccaattacaacttctaaccctaatttcgcaaattcccaaaactacaacccacaacctgttaaattcaattt 45530652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 405 - 584
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  405 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaatttccaaattctcataactacaacctacaac 504  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaa 195  Q
    |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||| |||||||||||||    
T  505 atgctaaactcaatttcagaatgatacaacttagaattagagaaagttagtctcacccttaccttagattgatcgacgaa 584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 159; Significance: 9e-85; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 25 - 207
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 124  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||| ||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  125 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattgatcgacgaagga 207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 159; Significance: 9e-85; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 24516073 - 24516255
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24516073 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 24516172  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||| ||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  24516173 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattgatcgacgaagga 24516255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 17307373 - 17307538
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17307373 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 17307472  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||    
T  17307473 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17307538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 5031297 - 5031125
Alignment:
Q  13 tggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctac 112  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5031297 tggacatcacttctacacaaattcaacgaattttatactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctac 5031198  T
Q  113 aacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  5031197 aacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 5031125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 9975816 - 9975985
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9975816 acatcaattctacacaaattcagcggattgtctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 9975915  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||  ||||||||||||||||    
T  9975916 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtccaacccttaccttaaatt 9975985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 24781005 - 24780836
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |    
T  24781005 acatcacttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacttc 24780906  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  24780905 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 24780836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 24436535 - 24436704
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  24436535 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaatttccaaattcccataactacaacctacaac 24436634  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || ||||| ||||||||||||| |||||||| ||||||||    
T  24436635 atgctaaactcaatttcagaattatacaacttagaattcgagaaagttagtcccacccttatcttaaatt 24436704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 40912207 - 40912372
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40912207 acatcatttctacacaaattcaacgaattttctactctattaacaaccaactacaacttcaaaacctaattcccaaattcccataactacaacctacaac 40912306  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||    
T  40912307 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 40912372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 19201365 - 19201200
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  19201365 acatcaattctacccaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcctataactacaacctacaac 19201266  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  19201265 atgataaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaactta 19201200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 29 - 185
Target Start/End: Complemental strand, 22251600 - 22251444
Alignment:
Q  29 acaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa 128  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22251600 acaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatgctaaactcaa 22251501  T
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    |||||||||||||||| || |||||||||||| ||||| ||||||||||||||||||    
T  22251500 tttcagaattatacaacttagaattagagaaaattagtttcacccttaccttaaatt 22251444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 37270587 - 37270747
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  37270587 acatcacttctac-caaattcaacggattttctactctattaacaacccattacaacttcaaaacttaattctcaaattctcataactacaacctacaac 37270685  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttac 177  Q
    |||||||||||||||||||||||||||||  | ||||||||||||||||||| |||||||||    
T  37270686 atgctaaactcaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 37270747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 27484642 - 27484514
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  27484642 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 27484543  T
Q  116 atgctaaactcaatttcagaattatacaa 144  Q
    |||||||||||||||||||||||||||||    
T  27484542 atgctaaactcaatttcagaattatacaa 27484514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 2523912 - 2523743
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| || ||||||||||| |||||||| ||||| |||||||||||||    
T  2523912 acatcaattctgcacaaattcaacgaattttctactctattaataaccaattacaatttaaaaacctaatttccaaattcccataaatacaacctacaac 2523813  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||| |||||||||||| |||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  2523812 atgttaaactcaatttaagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 2523743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 36841151 - 36841268
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||    
T  36841151 acatcaattctacacaaattcaacatattttctactctattaacaaccaattacaacttcaaaacctaatttctaaattcccataactacaacctacaac 36841250  T
Q  116 atgctaaactcaatttca 133  Q
    ||| ||||||||||||||    
T  36841251 atgttaaactcaatttca 36841268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 196
Target Start/End: Original strand, 25142133 - 25142271
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattagag 157  Q
    ||||||||||||||||| ||||||||||||||||||| || |||||||||||||||| || |||| |||| |||||||||||||| | || |||||||||    
T  25142133 caaccaattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattttcagaattataccacttagaattagag 25142232  T
Q  158 aaagttagtctcacccttaccttaaattgatcgacgaag 196  Q
    |||||||||| ||||||||||||| ||| ||||||||||    
T  25142233 aaagttagtcccacccttaccttagatttatcgacgaag 25142271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 57 - 198
Target Start/End: Complemental strand, 1383667 - 1383526
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattaga 156  Q
    ||||||||||||||||||| ||||||||||||||||||  || ||||||||||||| || || ||||  || ||||||||| |||||| || ||||||||    
T  1383667 aacaaccaattacaacttctaaacctaattcccaaatttccaaaactacaacctaccacctgttaaatccagtttcagaatgatacaacttagaattaga 1383568  T
Q  157 gaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||||||||||||||| | ||||||||||||||||    
T  1383567 gaaagttagtctcacccttacctcagattgatcgacgaagga 1383526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 357809 - 357933
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattaga 156  Q
    ||||||||||||||||||| ||||||||||||||||||   | ||||||||||||| || || ||||  || ||||||||| |||||| || ||||||||    
T  357809 aacaaccaattacaacttctaaacctaattcccaaatttcaaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 357908  T
Q  157 gaaagttagtctcacccttacctta 181  Q
    ||||||||||| |||||||||||||    
T  357909 gaaagttagtcccacccttacctta 357933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 190
Target Start/End: Original strand, 27852605 - 27852729
Alignment:
Q  67 tacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttag 165  Q
    ||||||||| ||| ||||||||||||||| || ||| |||||||||||| || |||| ||||||| ||||||||||| | || |||||||||||||||||    
T  27852605 tacaacttctaaatctaattcccaaattcccaaaacaacaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttag 27852704  T
Q  166 tctcacccttaccttaaattgatcg 190  Q
    || ||||||||||||| ||||||||    
T  27852705 tcccacccttaccttagattgatcg 27852729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 191
Target Start/End: Original strand, 3539766 - 3539899
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactc-aatttcagaattatacaaatttgaattagag 157  Q
    ||||||||||||||||| ||||||||||| |||||||  | |||||||||||||||| || |||| || | |||||||||||||| | ||  ||||||||    
T  3539766 caaccaattacaacttctaaacctaattctcaaattccaaaaactacaacctacaacttgttaaattcgattttcagaattataccacttaaaattagag 3539865  T
Q  158 aaagttagtctcacccttaccttaaattgatcga 191  Q
    |||||||||| ||||||||||||| ||| |||||    
T  3539866 aaagttagtcccacccttaccttagattcatcga 3539899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 191
Target Start/End: Original strand, 44072509 - 44072619
Alignment:
Q  81 ctaattcccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattagagaaagttagtctcacccttacct 179  Q
    |||||| |||||||| || |||||||||||||||| ||||||| |||| ||||| ||| |||| | || ||||||| |||||||||||||||||||||||    
T  44072509 ctaatttccaaattcccaaaactacaacctacaacttgctaaattcaattttcaaaatcatac-acttagaattagtgaaagttagtctcacccttacct 44072607  T
Q  180 taaattgatcga 191  Q
    ||  ||||||||    
T  44072608 taggttgatcga 44072619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 22501897 - 22502023
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaatt-cccaaattctcataactacaacctacaacatgctaaactcaatt-tcagaattatacaaatttgaatta 154  Q
    |||||||||| |||||||| || ||||||| |||||||||  | |||||||||| |||||||| ||||  ||||| ||||||||| |  | || ||||||    
T  22501897 aacaaccaatcacaacttctaaccctaatttcccaaattcataaaactacaacccacaacatgttaaatccaattctcagaattaaattacttagaatta 22501996  T
Q  155 gagaaagttagtctcacccttacctta 181  Q
    ||||||||||||| |||||||||||||    
T  22501997 gagaaagttagtcccacccttacctta 22502023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 22509831 - 22509957
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaatt-cccaaattctcataactacaacctacaacatgctaaactcaatt-tcagaattatacaaatttgaatta 154  Q
    |||||||||| |||||||| || ||||||| |||||||||  | |||||||||| |||||||| ||||  ||||| ||||||||| |  | || ||||||    
T  22509831 aacaaccaatcacaacttctaaccctaatttcccaaattcataaaactacaacccacaacatgttaaatccaattctcagaattaaattacttagaatta 22509930  T
Q  155 gagaaagttagtctcacccttacctta 181  Q
    ||||||||||||| |||||||||||||    
T  22509931 gagaaagttagtcccacccttacctta 22509957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 25046066 - 25046170
Alignment:
Q  78 aacctaattcccaaattctcataactacaacctacaacatgctaaactcaatt-tcagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    ||||||||||  |||| |||| ||||||| ||||||||||| ||||  ||||| |||||||||||||| || |||||| |||| ||||||| ||||||||    
T  25046066 aacctaattcttaaatcctcaaaactacatcctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtcccaccctta 25046165  T
Q  177 cctta 181  Q
    |||||    
T  25046166 cctta 25046170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 24884399 - 24884453
Alignment:
Q  58 acaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctac 112  Q
    |||||||||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  24884399 acaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 24884453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 188
Target Start/End: Original strand, 22259974 - 22260097
Alignment:
Q  64 aattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattagagaaagt 162  Q
    |||||||||||| || |||||||||||||||| |  |||||||||||||||| || |||| |||| ||||||||| || | | || ||||||| ||||||    
T  22259974 aattacaacttctaagcctaattcccaaattc-ctaaactacaacctacaacctgttaaattcaattttcagaatcatgc-acttagaattagtgaaagt 22260071  T
Q  163 tagtctcacccttaccttaaattgat 188  Q
    ||||| ||| ||||||||| ||||||    
T  22260072 tagtcacactcttaccttagattgat 22260097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 5986125 - 5986229
Alignment:
Q  78 aacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    |||||||||| ||||| |||| ||||| |||||||||| || ||||  |||||| ||||||||||||| || |||||| |||| ||| ||| ||||||||    
T  5986125 aacctaattctcaaatcctcaaaactataacctacaacttgttaaatccaattttcagaattatacaacttagaattaaagaaggttcgtcccaccctta 5986224  T
Q  177 cctta 181  Q
    |||||    
T  5986225 cctta 5986229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 83 - 198
Target Start/End: Complemental strand, 23068505 - 23068390
Alignment:
Q  83 aattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||| |||| ||||| ||||||||||||| ||||  |||||| |||||||| |  | || ||||||  ||| | ||||||||||||||||||     
T  23068505 aattcccaaatcctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtctcacccttaccttg 23068407  T
Q  182 aattgatcgacgaagga 198  Q
     ||||||||||||||||    
T  23068406 gattgatcgacgaagga 23068390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 21315506 - 21315459
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||||||||    
T  21315506 attagagaaagctagtcccacccttaccttagattgatcgacgaagga 21315459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 21335296 - 21335249
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||| ||||| ||||||||||||| ||||||||||||||||    
T  21335296 attagagaaagctagtcccacccttaccttagattgatcgacgaagga 21335249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 19358820 - 19358893
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattctcataactacaacctacaacatgctaaactcaattt 131  Q
    ||||||||||||||||| || ||||||| ||||||||| || |||||||||| ||||| || |||| |||||||    
T  19358820 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacccacaacttgttaaattcaattt 19358893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 191
Target Start/End: Original strand, 14694296 - 14694388
Alignment:
Q  100 aactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcga 191  Q
    |||||||||||||| |||| ||||  |||||| || ||||| |  | || |||||| |||||||||||||||||||||||||| ||| |||||    
T  14694296 aactacaacctacatcatgttaaatccaattttcaaaattaaattacttagaattatagaaagttagtctcacccttaccttagattaatcga 14694388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 25184189 - 25184241
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||| |  | || |||||||||||||||||||||||||||||||||    
T  25184189 tttcagaattaaaatacttagaattagagaaagttagtctcacccttacctta 25184241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 188
Target Start/End: Complemental strand, 18388312 - 18388183
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattagag 157  Q
    |||||| || ||||||| || | |||||||||||||| || |||||||||||||||| || ||||  ||| ||||||||| |||  | |  | ||||  |    
T  18388312 caaccatttgcaacttctaaccataattcccaaattcccaaaactacaacctacaacttgttaaatccaattttcagaatcata-tactcaggattattg 18388214  T
Q  158 aaagttagtctcacccttaccttaaattgat 188  Q
    || ||||||||||||||||||||| ||||||    
T  18388213 aaggttagtctcacccttaccttagattgat 18388183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 18390326 - 18390229
Alignment:
Q  69 caacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactc-aatttcagaattatacaaatttgaattagagaaagttagt 166  Q
    ||||||| || |||||||||||||||| || ||||||||| ||| || || |||| || | |||||||||||||  | || ||||||||||||||||||    
T  18390326 caacttctaatcctaattcccaaattcccaaaactacaacatac-acttgttaaattctattttcagaattatatcacttagaattagagaaagttagt 18390229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 21081021 - 21080969
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||| |  | || ||||||||||||||||||| |||||||||||||    
T  21081021 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 21080969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 39683162 - 39683214
Alignment:
Q  80 cctaattcccaaattctcataa-ctacaacctacaacatgctaaactcaattt 131  Q
    ||||||||||||||||||| || ||| ||||||||||||| |||| |||||||    
T  39683162 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaattcaattt 39683214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 158; Significance: 4e-84; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 19676598 - 19676767
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19676598 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 19676697  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  19676698 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 19676767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 42912936 - 42913118
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  42912936 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacaacttcaaaacctaattcctaaattcccacaactacaacctacaac 42913035  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42913036 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagattgatcgacgaagga 42913118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 21046214 - 21046045
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  21046214 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 21046115  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  21046114 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 21046045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 16058478 - 16058314
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  16058478 acatcacttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaa-cctaattcccaaatttccataactacaacctacaac 16058380  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||||||||||||||||||||| || |||||||||||| |||||| |||||||||||||    
T  16058379 atgctaaactcaatttcagaattatacaacttagaattagagaaatttagtcccacccttacctta 16058314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 20633799 - 20633627
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattc---tcataactacaacctac 112  Q
    ||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||||||||||||||||   | ||||||| |||||||    
T  20633799 acatcaattctacacaaattcaacttattttttattctattaacaaccaattacaacttcaaaacctaattcccaaattcccataataactataacctac 20633700  T
Q  113 aacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    |||||||||||||||||||||||||||||||| || ||||||||| ||||||||| |||||||| ||||||||    
T  20633699 aacatgctaaactcaatttcagaattatacaacttagaattagagcaagttagtcccacccttatcttaaatt 20633627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 188
Target Start/End: Original strand, 51324396 - 51324563
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgct 120  Q
    |||||||||| |||||||  ||||||||||| |   ||||||||||||||||||  ||||||||||||||| ||| || ||||||||||||| || || |    
T  51324396 aattctacaccaattcaatagattttctactattaaaacaaccaattacaacttttaaacctaattcccaatttcccaaaactacaacctaccacctgtt 51324495  T
Q  121 aaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgat 188  Q
    |||  || ||||||||| |||||| || ||||||| ||||||||||||||||||||||||| ||||||    
T  51324496 aaatccagtttcagaatcatacaacttagaattagggaaagttagtctcacccttaccttagattgat 51324563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 13302849 - 13302964
Alignment:
Q  77 aaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcaccctt 175  Q
    ||||||||||||||||||| || |||||||||||||||| || |||| ||||||| ||||||||||| | || |||||||||||||||||||||||||||    
T  13302849 aaacctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttagtctcaccctt 13302948  T
Q  176 accttaaattgatcga 191  Q
    |||||| |||||||||    
T  13302949 accttagattgatcga 13302964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 198
Target Start/End: Complemental strand, 7052046 - 7051905
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattaga 156  Q
    ||||||||||||||| ||| ||||||||||||||||||   | ||||| || |||| || || ||||  || ||||||||| |||||| || ||||||||    
T  7052046 aacaaccaattacaatttctaaacctaattcccaaatttctaaaactaaaatctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 7051947  T
Q  157 gaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  7051946 gaaagttagtcccacccttaccttagattgatcgacgaagga 7051905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 24723475 - 24723344
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattaga 156  Q
    ||||||||||||||||||| |||| |||||| ||||||  || |||||||| |||| || || |||| ||| ||||||||| |||||| || ||||||||    
T  24723475 aacaaccaattacaacttctaaacataattctcaaatttccaaaactacaatctaccacctgttaaattcagtttcagaatcatacaacttagaattaga 24723376  T
Q  157 gaaagttagtctcacccttaccttaaattgat 188  Q
    ||||||||||| ||||||||||||| ||||||    
T  24723375 gaaagttagtcccacccttaccttagattgat 24723344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 198
Target Start/End: Complemental strand, 4595995 - 4595836
Alignment:
Q  32 aattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt 131  Q
    |||||| |||||| ||||||||   | ||||||||||||||||| ||| ||||||||||||        ||||||||||||||| || |||| || ||||    
T  4595995 aattcatcggattatctactcttaaatcaaccaattacaacttctaaatctaattcccaaa--------actacaacctacaacttgttaaattcgattt 4595904  T
Q  132 -cagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
     |||||||||||   || ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4595903 tcagaattatacctcttagaattagagaaagttagtctcacccttaccttagattgatcgacgaagga 4595836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 21168825 - 21168990
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgc 119  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||| ||  || | |||||||||| |||||||||||| || |   |||| | |||||||||    
T  21168825 caattgtacacaaattcaatggattttctactctattaaaaacaaaa-actaattcaaaaccttattcccaaattcacaaattcacaaacaacaacatgc 21168923  T
Q  120 taaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattg 186  Q
    |||||||||||| ||||||||||||  |  ||||||||||||||| |  ||||||||||||| ||||    
T  21168924 taaactcaattttagaattatacaacctaaaattagagaaagttaattccacccttaccttagattg 21168990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 42697732 - 42697836
Alignment:
Q  78 aacctaattcccaaattctcataactacaacctacaacatgctaaactcaatt-tcagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    |||||||||| ||||| |||| ||||||||||||||||||| ||||  ||||| |||||||||||||| || |||||| |||| ||||||||||||||||    
T  42697732 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaatccaattctcagaattatacaacttagaattaaagaaggttagtctcaccctta 42697831  T
Q  177 cctta 181  Q
    |||||    
T  42697832 cctta 42697836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 186
Target Start/End: Complemental strand, 7320716 - 7320589
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattagag 157  Q
    |||||||||||||| || |||| |||||||||||||| || |||||||| ||||||| || |||| |||| ||||||||| |||| | || ||||||| |    
T  7320716 caaccaattacaacatctaaacataattcccaaattcccaaaactacaatctacaacctgttaaattcaattttcagaataatac-acttagaattagtg 7320618  T
Q  158 aaagttagtctcacccttaccttaaattg 186  Q
     | ||||||| ||||||||||||| ||||    
T  7320617 taggttagtcccacccttaccttagattg 7320589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 21239130 - 21239039
Alignment:
Q  100 aactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcga 191  Q
    ||||||||||||| || || ||||  || ||||||||| |||||| || ||||||||||||||||||| ||||| ||||||| |||||||||    
T  21239130 aactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattagagaaagttagtcccacccataccttagattgatcga 21239039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 12327795 - 12327743
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||| |||||| || |||||||||||||||||||||||||||||||||    
T  12327795 tttcagaatcatacaacttagaattagagaaagttagtctcacccttacctta 12327743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 190
Target Start/End: Original strand, 22350646 - 22350777
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattagag 157  Q
    |||||| || ||||||| || |||||||||||||||| || |||||||||||||||| || |||| |||| ||||||||| |||  | |  ||||||  |    
T  22350646 caaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaacttgttaaattcaattttcagaatcata-tactcagaattattg 22350744  T
Q  158 aaagttagtctcacccttaccttaaattgatcg 190  Q
    || ||||||| ||||||||||||| ||||||||    
T  22350745 aaggttagtcccacccttaccttagattgatcg 22350777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 45755468 - 45755572
Alignment:
Q  78 aacctaattcccaaattctcataactacaacctacaacatgctaaactca-atttcagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    |||||||||| |||||||||| |||||||||||||||| || ||||  ||  ||||||||| ||| || ||  ||||| |||| ||||||||||||||||    
T  45755468 aacctaattctcaaattctcaaaactacaacctacaacttgttaaatccacttttcagaatcatataacttataattaaagaaggttagtctcaccctta 45755567  T
Q  177 cctta 181  Q
    |||||    
T  45755568 cctta 45755572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 44822145 - 44822090
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctac 112  Q
    ||||||||||||||||||| ||||||||||||||||||  || |||||||||||||    
T  44822145 aacaaccaattacaacttctaaacctaattcccaaatttccagaactacaacctac 44822090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 50544894 - 50544941
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  50544894 attagagaaagctagtctcacccttaccttagattgatcgacgaagga 50544941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 51336479 - 51336531
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||| |||||| || ||||||||||||||||||| |||||||||||||    
T  51336479 tttcagaatcatacaacttagaattagagaaagttagtcccacccttacctta 51336531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 45499374 - 45499446
Alignment:
Q  111 acaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaat 184  Q
    |||| |||||||||||||||||||||||||||||  |  ||||||||| ||||| || ||||||||| ||||||    
T  45499374 acaatatgctaaactcaatttcagaattatacaacctaaaattagagagagttaatc-cacccttacgttaaat 45499446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 11946391 - 11946453
Alignment:
Q  80 cctaattcccaaattc-tcataactacaacctacaacatgctaaactcaatttcagaattata 141  Q
    ||||||||||||| || ||| ||||| ||||||||||||| ||||  ||||||||||||||||    
T  11946391 cctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaatttcagaattata 11946453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 39243700 - 39243662
Alignment:
Q  158 aaagttagtctcacccttaccttaaattgatcgacgaag 196  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  39243700 aaagttagtctcacccttaccttggattgatcgacgaag 39243662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 39247255 - 39247217
Alignment:
Q  158 aaagttagtctcacccttaccttaaattgatcgacgaag 196  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  39247255 aaagttagtctcacccttaccttggattgatcgacgaag 39247217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 8276112 - 8276079
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaa 92  Q
    ||||||||||||||||| ||||||||||||||||    
T  8276112 caaccaattacaacttctaaacctaattcccaaa 8276079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 38056795 - 38056762
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaa 92  Q
    ||||||||||||||||| ||||||||||||||||    
T  38056795 caaccaattacaacttctaaacctaattcccaaa 38056762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 29763684 - 29763632
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||| |  | || ||||||||||||||||||| |||||||||||||    
T  29763684 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 29763632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 46197797 - 46197745
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||| |  | || ||||||||||||||||||| |||||||||||||    
T  46197797 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 46197745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 154; Significance: 9e-82; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 12465425 - 12465256
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12465425 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 12465326  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  12465325 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 12465256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 14180563 - 14180381
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||     
T  14180563 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacataattcccaaattcccataactacaacctacaat 14180464  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||||||||||||||||||||| || |||||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  14180463 atgctaaactcaatttcagaattatacaacttagaattagagaaaattagtcacacccttaccttagattgatcgacgaagga 14180381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 8851324 - 8851155
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8851324 acatcaattctacacaaattcaacagattttatactctattaacaaccaattacaacttcaaaacctaatttccaaattctcataactacaacctacaac 8851225  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  8851224 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 8851155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 20214034 - 20214216
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  20214034 acatcaattgtacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 20214133  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||||||||||||||||||||| |  ||||| ||||||||||||| ||||||||||||| ||| ||||||||||||    
T  20214134 atgctaaactcaatttcagaattatacaactcagaatttgagaaagttagtcccacccttaccttagattaatcgacgaagga 20214216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 20620173 - 20620339
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  20620173 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatttccataactacaacctacaac 20620272  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaa 182  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| ||| ||||||||||    
T  20620273 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacacttaccttaa 20620339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 12372161 - 12372330
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||    
T  12372161 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctgcaac 12372260  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  12372261 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 12372330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 32433754 - 32433585
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  32433754 acatcacttctacacaaattcaactaattttctactctattaacaaccaattacaacttcaaaacctaattcacaaattcacataactacaacctacaac 32433655  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  32433654 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 32433585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 13147637 - 13147471
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13147637 acatcacttctacacaaattcaacggattttctactttattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 13147538  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaa 182  Q
    |||||||||||||||||||||||||| || || ||||||||||||||||||| ||||||||||||||    
T  13147537 atgctaaactcaatttcagaattatataacttagaattagagaaagttagtcccacccttaccttaa 13147471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 20586239 - 20586421
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || || ||||| |||||||||||||||||||    
T  20586239 acatcaattctacacaaattcaacggattttctactctattaacaaccaattgcaacttcaaaccctagtttcctaattcccataactacaacctacaac 20586338  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||| ||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  20586339 atggtaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattgatcgacgaagga 20586421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 11067355 - 11067524
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||| |||| ||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||    
T  11067355 acatcacttctccacaaattcaacgaattttctactctattaacaaccaattactacatcaaaacctaattcccaaattcccataactacaacctacaac 11067454  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  11067455 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 11067524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 12323095 - 12322926
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  12323095 acatcaattctacacaaattcaacggattttctattctattaacaaccaagtacaacttcaaaacctaattcccaaatttccataactacaacctacaac 12322996  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||  |||||||||||||||||    
T  12322995 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagttccacccttaccttaaatt 12322926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 46386253 - 46386078
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  46386253 acatcaattctacacaaattcaacggaatttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaac 46386154  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcga 191  Q
    ||  ||||||||||||||||||||||||| || |||||||||||||||||||  ||||||| |||| |||||||||    
T  46386153 atattaaactcaatttcagaattatacaacttagaattagagaaagttagtcctacccttatcttagattgatcga 46386078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 16999320 - 16999492
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattccc-aaattctcataactacaacctacaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||| || ||    
T  16999320 acatcaattctacacaaattcaacggattttctactctattaacaaccgattacaacttcaaaacctaattcccaaaattcccataactacaacatataa 16999419  T
Q  115 catgctaaactcaatttcagaattatacaaat--ttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    |||||||||||||||||||||||||||||| |  | |||||||||||||||||||||||||||||||||||||    
T  16999420 catgctaaactcaatttcagaattatacaacttatagaattagagaaagttagtctcacccttaccttaaatt 16999492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 12127328 - 12127163
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||    
T  12127328 acataaattctacacaaattcaacgaattttctactctcttaacaaccaattacaacttcaaaacctaattcccaaatttccataactaaaacctacaac 12127229  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||| ||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||    
T  12127228 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 12127163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 177
Target Start/End: Original strand, 10277215 - 10277375
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10277215 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 10277313  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttac 177  Q
    |||||||||| ||||||||||||||||||  | ||||||||||||||||||| |||||||||    
T  10277314 atgctaaacttaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 10277375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 24270112 - 24269942
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| || |   |||| | |||||    
T  24270112 acatcaattgtacacaaattcaatggattttctactctattaacaaccaattacgacttcaaaacctaattcccaacttcacaaattcacaaacaacaac 24270013  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattg 186  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||||||| || ||||||||||||| ||||    
T  24270012 atgctaaactcaatttcagaattatacaacttaaaattagagaaagttaatcccacccttaccttagattg 24269942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 14219008 - 14218885
Alignment:
Q  69 caacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtc 167  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||||| || |||| ||||||| ||||||||||| | || |||||||||||||||||||    
T  14219008 caacttctaaacctaattccaaaattctcaaaactacaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaagttagtc 14218909  T
Q  168 tcacccttaccttaaattgatcga 191  Q
    |||||||||||||| |||||||||    
T  14218908 tcacccttaccttagattgatcga 14218885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 47974944 - 47974820
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattaga 156  Q
    ||||||||||||||||||| |||| |||||||||||||  || ||||||||||||| || || ||||  || ||||||||| |||||| || ||||||||    
T  47974944 aacaaccaattacaacttctaaacataattcccaaatttccaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 47974845  T
Q  157 gaaagttagtctcacccttacctta 181  Q
    |||||||||||||||||||||||||    
T  47974844 gaaagttagtctcacccttacctta 47974820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 188
Target Start/End: Complemental strand, 8135359 - 8135231
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagaga 158  Q
    ||||||||||||||||| ||||||||||| |||||||  | |||||||||||||||| || |||| ||||||||||||| |||| | || | ||||| ||    
T  8135359 caaccaattacaacttctaaacctaattctcaaattcctaaaactacaacctacaacctgttaaattcaatttcagaatcatac-acttaggattagtga 8135261  T
Q  159 aagttagtctcacccttaccttaaattgat 188  Q
    | ||||||||||||||||||||| ||||||    
T  8135260 aggttagtctcacccttaccttagattgat 8135231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 191
Target Start/End: Original strand, 15140143 - 15140275
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattagag 157  Q
    ||||||||||||||||  ||||||||||||||||||| || |||||||||||||||| || |||| |||| ||||||||| |||| | || ||||||| |    
T  15140143 caaccaattacaacttttaaacctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagtg 15140241  T
Q  158 aaagttagtctcacccttaccttaaattgatcga 191  Q
    || ||||||||||||| ||||||| |||||||||    
T  15140242 aaggttagtctcacccataccttagattgatcga 15140275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 191
Target Start/End: Complemental strand, 48807448 - 48807315
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagag 157  Q
    |||||||||||||||||   ||| ||||||||||||| || |||||||| ||||||| || |||| || |||| ||||||||||| | || |||||||||    
T  48807448 caaccaattacaacttctgtaccaaattcccaaattcccaaaactacaatctacaacttgttaaattcgattttcagaattataccacttagaattagag 48807349  T
Q  158 aaagttagtctcacccttaccttaaattgatcga 191  Q
    |||||||||| ||||||||||||| |||||||||    
T  48807348 aaagttagtcccacccttaccttagattgatcga 48807315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 188
Target Start/End: Complemental strand, 15095759 - 15095630
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattagag 157  Q
    |||| |||||||||||| ||||||||||||||||||| || |||||||||||||||| || |||| |||| ||||||||| |||| | || ||||||| |    
T  15095759 caactaattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagtg 15095661  T
Q  158 aaagttagtctcacccttaccttaaattgat 188  Q
    || ||||||| ||||||||||||| ||||||    
T  15095660 aaggttagtcccacccttaccttagattgat 15095630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 13698761 - 13698621
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattagag 157  Q
    ||||||||||||||||| || |||||||||||||||  || |||||||||||| ||||||  |||  ||| |||||||||||  ||| ||  ||||| ||    
T  13698761 caaccaattacaacttctaaccctaattcccaaatttccaaaactacaacctaaaacatgtcaaatccaattttcagaattaatcaacttaaaattaaag 13698662  T
Q  158 aaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||  |||||||||||| ||||||||||||||||    
T  13698661 aaagttagtcctacccttaccttagattgatcgacgaagga 13698621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 191
Target Start/End: Original strand, 15623950 - 15624080
Alignment:
Q  60 aaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaa 159  Q
    |||||||||||||| | ||||||||||| ||||||| || |||||||| ||||||| |  |||| ||||||||||||| |||| | || ||||||  |||    
T  15623950 aaccaattacaactcctaaacctaattctcaaattcccaaaactacaaactacaacctattaaattcaatttcagaatcatac-acttagaattattgaa 15624048  T
Q  160 agttagtctcacccttaccttaaattgatcga 191  Q
     ||||||||||||||||||||| |||||||||    
T  15624049 ggttagtctcacccttaccttagattgatcga 15624080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 182
Target Start/End: Original strand, 33002053 - 33002206
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgct 120  Q
    |||||||||| |||||||| |||| |||||| |   ||||||||||||||||||| || |||||||||||||||| || ||||||||||       || |    
T  33002053 aattctacaccaattcaacagattctctactattacaacaaccaattacaacttctaaccctaattcccaaattccca-aactacaacc-------tgtt 33002144  T
Q  121 aaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaa 182  Q
    |||  |||||||||||| |||||| || |||||||||||||||||||  |||||||||||||    
T  33002145 aaatccaatttcagaatcatacaacttagaattagagaaagttagtccgacccttaccttaa 33002206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 182
Target Start/End: Original strand, 25943041 - 25943171
Alignment:
Q  52 ctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaa 151  Q
    |||||||||||||||||| |||||||||||||||| |||||||| || |   |||| | ||||||||||||| ||||||||||||||||||||     ||    
T  25943041 ctattaacaaccaattacgacttcaaaacctaatttccaaattcacaaattcacaaacaacaacatgctaaattcaatttcagaattatacaacccaaaa 25943140  T
Q  152 ttagagaaagttagtctcacccttaccttaa 182  Q
    ||||||||||||| || |||| |||| ||||    
T  25943141 ttagagaaagttaatcccaccgttacattaa 25943171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 181
Target Start/End: Complemental strand, 35771554 - 35771441
Alignment:
Q  69 caacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtc 167  Q
    ||||||| ||||||||||||||||||  || |||||||||||||||| || |||| || |||| ||||||||||  | || |||||||||||||||||||    
T  35771554 caacttctaaacctaattcccaaatttccaaaactacaacctacaacttgttaaattcgattttcagaattatatcacttagaattagagaaagttagtc 35771455  T
Q  168 tcacccttacctta 181  Q
     |||||||||||||    
T  35771454 ccacccttacctta 35771441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 44374833 - 44374895
Alignment:
Q  119 ctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||    
T  44374833 ctaaactcaatttcagaattatacaacttagaattagagaaagttactctcacccttacctta 44374895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 44383698 - 44383760
Alignment:
Q  119 ctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||    
T  44383698 ctaaactcaatttcagaattatacaacttagaattagagaaagttactctcacccttacctta 44383760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 13132443 - 13132363
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaatta 139  Q
    ||||| ||||||||||| ||||||||||||||||||| || |||||| ||||||||| || |||| |||||||||||||||    
T  13132443 caaccgattacaacttctaaacctaattcccaaattcccaaaactacgacctacaacttgttaaattcaatttcagaatta 13132363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 181
Target Start/End: Original strand, 4071759 - 4071872
Alignment:
Q  69 caacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtc 167  Q
    ||||||| ||||||||||| ||||| | || |||||||||||||||| || ||||  |||||| |||| |||||  | || |||||||||||||||||||    
T  4071759 caacttctaaacctaattctcaaatccccaaaactacaacctacaacttgttaaatccaattttcagagttatatcacttagaattagagaaagttagtc 4071858  T
Q  168 tcacccttacctta 181  Q
     |||||||||||||    
T  4071859 ccacccttacctta 4071872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 181
Target Start/End: Original strand, 16078281 - 16078382
Alignment:
Q  81 ctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcacccttacct 179  Q
    ||||||||||||||| || |||||||| ||||||| || |||| || |||| || |||||||| | || ||||||||||||||||||| |||||||||||    
T  16078281 ctaattcccaaattcccaaaactacaaactacaacttgttaaattcgattttcataattataccacttagaattagagaaagttagtcccacccttacct 16078380  T
Q  180 ta 181  Q
    ||    
T  16078381 ta 16078382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 181
Target Start/End: Complemental strand, 12754716 - 12754612
Alignment:
Q  77 aaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    |||| |||||||||||||  ||| |||||||||||| || || ||||  || ||||||||| ||| || || ||||||||||||||||||| ||||||||    
T  12754716 aaacataattcccaaatttccattactacaacctaccacctgttaaatccagtttcagaatcatataacttagaattagagaaagttagtcccaccctta 12754617  T
Q  177 cctta 181  Q
    |||||    
T  12754616 cctta 12754612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 181
Target Start/End: Original strand, 12557853 - 12557973
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattagagaa 159  Q
    ||||||| ||||||| |||||||||| |||||||| || |||||||||||||||| || |||| |||| ||| ||||| |||| | || ||||||| |||    
T  12557853 accaatttcaacttctaaacctaatttccaaattcccaaaactacaacctacaacctgttaaattcaatttttagaatcatac-acttagaattagtgaa 12557951  T
Q  160 agttagtctcacccttacctta 181  Q
     ||||||||||| |||| ||||    
T  12557952 ggttagtctcactcttatctta 12557973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 13744728 - 13744655
Alignment:
Q  111 acaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaat 184  Q
    ||||||||||||||| ||||||||||||||||||  |  ||||||||||||||| || ||||||||| ||||||    
T  13744728 acaacatgctaaacttaatttcagaattatacaacctaaaattagagaaagttaatcccacccttacgttaaat 13744655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 181
Target Start/End: Original strand, 15289052 - 15289157
Alignment:
Q  77 aaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattagagaaagttagtctcaccctt 175  Q
    ||||||||||| ||||| |||| |||||||||||||||| || ||||  ||| ||||||| |||||  | || ||||||||||||||| ||| |||||||    
T  15289052 aaacctaattctcaaatcctcaaaactacaacctacaacttgttaaatccaattttcagagttataatacttagaattagagaaagttggtcccaccctt 15289151  T
Q  176 acctta 181  Q
    ||||||    
T  15289152 acctta 15289157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 18874695 - 18874648
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  18874695 attagagaaagctagtctcacccttaccttagattgatcgacgaagga 18874648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 3287744 - 3287813
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||||||||  |   ||||||||||| ||||||||||||||||||| ||||||||||| ||||    
T  3287744 tttcagaattatacaacctattattagagaaagctagtctcacccttaccttagattgatcgacggagga 3287813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 10658932 - 10658851
Alignment:
Q  100 aactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||| ||||||| ||| ||||  |||||||||||| |||||| || |||||| |||| ||||||| |||||||||||||    
T  10658932 aactacatcctacaaaatgttaaatccaatttcagaatcatacaacttagaattaaagaaggttagtcccacccttacctta 10658851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 4690715 - 4690663
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||||||||||| || ||||||||||||||||||| |||| ||||||||    
T  4690715 tttcagaattatacaacttagaattagagaaagttagtcccacctttacctta 4690663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 141
Target Start/End: Original strand, 41284963 - 41285043
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattata 141  Q
    |||||||| |||||| |||||||||||||||||||  | |||||||||||| ||| |  ||||  ||||||||||||||||    
T  41284963 accaattataacttctaaacctaattcccaaattcctaaaactacaacctataacctattaaatccaatttcagaattata 41285043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 25942358 - 25942401
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaac 59  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||    
T  25942358 acatcaattgtacacaaattcaatggattttctactctattaac 25942401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 198
Target Start/End: Complemental strand, 14928389 - 14928272
Alignment:
Q  81 ctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcacccttacct 179  Q
    |||||||||||||  ||| ||||| || |||||||||| ||||  |||||| |||||||| | || || ||||||  ||| ||||||| |||||||||||    
T  14928389 ctaattcccaaatcgtcaaaacta-aatctacaacatgttaaatacaattttcagaattaaagaacttagaattactgaaggttagtcccacccttacct 14928291  T
Q  180 taaattgatcgacgaagga 198  Q
    |  ||||||||||||||||    
T  14928290 tggattgatcgacgaagga 14928272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 198
Target Start/End: Complemental strand, 15351855 - 15351738
Alignment:
Q  81 ctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcacccttacct 179  Q
    |||||||||||||  ||| ||||| || |||||||||| ||||  |||||| |||||||| | || || ||||||  ||| ||||||| |||||||||||    
T  15351855 ctaattcccaaatcgtcaaaacta-aatctacaacatgttaaatacaattttcagaattaaagaacttagaattactgaaggttagtcccacccttacct 15351757  T
Q  180 taaattgatcgacgaagga 198  Q
    |  ||||||||||||||||    
T  15351756 tggattgatcgacgaagga 15351738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 19283079 - 19283112
Alignment:
Q  152 ttagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||||||||    
T  19283079 ttagagaaagttagtctcacccttaccttaaatt 19283112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 198
Target Start/End: Original strand, 32302177 - 32302296
Alignment:
Q  80 cctaattcccaaattctcataactacaacctacaacatgctaaactcaattt--cagaattatacaaatttgaattagagaaagttagtctcacccttac 177  Q
    |||||||||||||| |||| ||||| ||||||||||||| ||||  ||||||  |||||||| |  | || ||||||  ||| | ||||| |||||||||    
T  32302177 cctaattcccaaatcctcaaaacta-aacctacaacatgttaaatacaatttttcagaattaaaacacttagaattattgaaggctagtcccacccttac 32302275  T
Q  178 cttaaattgatcgacgaagga 198  Q
    |||  ||||||||||||||||    
T  32302276 cttggattgatcgacgaagga 32302296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 198
Target Start/End: Original strand, 14259346 - 14259463
Alignment:
Q  80 cctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcacccttacc 178  Q
    ||||||||||||||||||| ||||| |  |||||||||| ||||  |||||| |||||||| |  | || ||||||  ||| | ||||| ||||||||||    
T  14259346 cctaattcccaaattctcaaaactaaa--ctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacc 14259443  T
Q  179 ttaaattgatcgacgaagga 198  Q
    ||  ||||||||||||||||    
T  14259444 ttggattgatcgacgaagga 14259463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 18955330 - 18955382
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||||||||  | || |||||||||||||||||||||||| ||||||||    
T  18955330 tttcagaattataacacttagaattagagaaagttagtctcacctttacctta 18955382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 191
Target Start/End: Complemental strand, 36704673 - 36704561
Alignment:
Q  80 cctaattcccaaattctc-ataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacc 178  Q
    |||||||| ||||| ||| | ||||||| | ||||||||| ||||   ||||||||||||| |||| ||  ||||| |||| ||||||| ||||||||||    
T  36704673 cctaattctcaaatcctccaaaactacatcttacaacatgttaaatcaaatttcagaattacacaacttaaaattaaagaaggttagtcccacccttacc 36704574  T
Q  179 ttaaattgatcga 191  Q
    ||| ||| |||||    
T  36704573 ttagattaatcga 36704561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 708459 - 708412
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||| ||||| ||||| ||||||| ||||||||||||||||    
T  708459 attagagaaagctagtcccacccctaccttagattgatcgacgaagga 708412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 47095474 - 47095521
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||| ||||| ||||||||||||| |||||| |||||||||    
T  47095474 attagagaaagctagtcccacccttaccttagattgattgacgaagga 47095521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 139
Target Start/End: Complemental strand, 36685253 - 36685187
Alignment:
Q  73 ttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaatta 139  Q
    |||||| |||||||||||||||  || |||||||||||||||| || ||||  || |||||||||||    
T  36685253 ttcaaaccctaattcccaaatttccaaaactacaacctacaacctgttaaatccagtttcagaatta 36685187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 185
Target Start/End: Complemental strand, 43276774 - 43276740
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||| |||||||||||||||||    
T  43276774 attagagaaagttagtcccacccttaccttaaatt 43276740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 11054642 - 11054715
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattctcataactacaacctacaacatgctaaactcaattt 131  Q
    ||||||||||||||||  || ||||||| ||||||||| || || ||||||||||||| || |||| |||||||    
T  11054642 caaccaattacaacttataaccctaatttcccaaattcccaaaattacaacctacaacctgttaaattcaattt 11054715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 20488368 - 20488405
Alignment:
Q  161 gttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  20488368 gttagtctcacccttaccttggattgatcgacgaagga 20488405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 195
Target Start/End: Complemental strand, 15575679 - 15575635
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaattgatcgacgaa 195  Q
    ||||||||||| ||||| ||||| ||||||| |||||||||||||    
T  15575679 attagagaaagctagtcccacccctaccttagattgatcgacgaa 15575635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 18990847 - 18990899
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||||||||  | || |||||||||||||||||| ||||| ||||||||    
T  18990847 tttcagaattataacacttagaattagagaaagttagtatcacctttacctta 18990899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 29052234 - 29052182
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||| |  | || ||||||||||||||||||| |||||||||||||    
T  29052234 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 29052182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 32160252 - 32160200
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||| |  | || |||||||||||||||||||| ||||||||||||    
T  32160252 tttcagaattaaattacttagaattagagaaagttagtcttacccttacctta 32160200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 9e-82; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 25091540 - 25091709
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25091540 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 25091639  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  25091640 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 25091709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 184
Target Start/End: Original strand, 11425825 - 11425998
Alignment:
Q  11 gatggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacct 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  11425825 gatgaacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaatttcaaaacctaattcccaaattcccataactacaacct 11425924  T
Q  111 acaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaat 184  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||    
T  11425925 acaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaat 11425998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 53630639 - 53630470
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  53630639 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 53630540  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  53630539 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 53630470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 15115109 - 15115291
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||    
T  15115109 acatcaattctacacaaattcaacagattttctactctattaacaaccaattacaacttcaaaaaataattcccaaattcccataactacaacctacaac 15115208  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||| |||||||||| |||||    
T  15115209 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattgatcgacaaagga 15115291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 10356601 - 10356432
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10356601 acatcaattctacacaaattcaacggattttctactctattaactaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 10356502  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| || ||||||||||||||    
T  10356501 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccaaccttaccttaaatt 10356432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 37019561 - 37019739
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgc 119  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||     
T  37019561 caattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaacatgt 37019660  T
Q  120 taaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  37019661 taaactcaatttcagaattatacaacttaaaattagagaaagttagtcacacccttaccttagattgatcgacgaagga 37019739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 16998412 - 16998581
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16998412 acatcaatactacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 16998511  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    |||||||||||||||||| |||||||||| || ||||||||||||||||||||||| |||||||||||||    
T  16998512 atgctaaactcaatttcataattatacaacttagaattagagaaagttagtctcactcttaccttaaatt 16998581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 19610211 - 19610380
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||| |||||||||||||||||||    
T  19610211 acatcaattctacacaaatttaacggattttctactctattaacaaccaattacaacgtcaaaacttaattctcaaattcccataactacaacctacaac 19610310  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||    
T  19610311 atgctaaactcaatttcagaattatacaacttaaaattagagaaagttagtctcacccttaccttaaatt 19610380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 42875684 - 42875853
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  42875684 acatcaattctacacaaattcaacggattttctactctattaacaatcaattacaacttcaaaacctatttcccaaattcccataactacaacctacaac 42875783  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || |||||| | |||||||||| |||||||||||||||||    
T  42875784 atgctaaactcaatttcagaattatacaacttagaattatataaagttagtcccacccttaccttaaatt 42875853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 16 - 177
Target Start/End: Complemental strand, 46001695 - 46001535
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  46001695 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 46001597  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttac 177  Q
    |||||||||| ||||||||||||||||||  | |||||||||||||||||||||||||||||    
T  46001596 atgctaaacttaatttcagaattatacaacgtagaattagagaaagttagtctcacccttac 46001535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 177
Target Start/End: Complemental strand, 6633701 - 6633541
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6633701 acatcacttctac-caaattcaacgaattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaac 6633603  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttac 177  Q
    |||||||||| ||||||||||||||||||  | ||||||||||||||||||| |||||||||    
T  6633602 atgctaaacttaatttcagaattatacaacgtagaattagagaaagttagtcccacccttac 6633541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 61 - 198
Target Start/End: Original strand, 9924085 - 9924223
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaa 159  Q
    ||||||||||||||| |||||||||| |||||||| || |||| ||||||||||| || |||| ||||||| ||||||||||| | || |||||||||||    
T  9924085 accaattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaa 9924184  T
Q  160 agttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  9924185 agttagtctcacccttaccttagattgatcgacgaagga 9924223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 198
Target Start/End: Original strand, 14549695 - 14549829
Alignment:
Q  64 aattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagtt 163  Q
    |||||||||||| ||||||||||||||||||  || ||||||||||||| || || ||||  || ||||||||  |||||| || |||||||||||||||    
T  14549695 aattacaacttctaaacctaattcccaaatttccaaaactacaacctaccacctgttaaatccagtttcagaaacatacaacttagaattagagaaagtt 14549794  T
Q  164 agtctcacccttaccttaaattgatcgacgaagga 198  Q
    |||||||||||||||||| ||||||||||||||||    
T  14549795 agtctcacccttaccttagattgatcgacgaagga 14549829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 63 - 198
Target Start/End: Complemental strand, 11478772 - 11478636
Alignment:
Q  63 caattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaag 161  Q
    ||||||||| ||| |||||||||| |||||||| || |||| ||| ||||||| || |||| ||||||| ||||||||||| | || ||||||||| |||    
T  11478772 caattacaagttctaaacctaatttccaaattcccaaaacttcaatctacaacttgttaaattcaattttcagaattataccacttagaattagaggaag 11478673  T
Q  162 ttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    |||||||||||||||||||| ||||||||||||||||    
T  11478672 ttagtctcacccttaccttagattgatcgacgaagga 11478636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 198
Target Start/End: Complemental strand, 19434672 - 19434542
Alignment:
Q  68 acaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtc 167  Q
    |||||||| |||| |||||||||||||   | ||||||||||||| || || ||||  || ||||||||| |||||| || |||||||||||||||||||    
T  19434672 acaacttctaaacttaattcccaaatttcaaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattagagaaagttagtc 19434573  T
Q  168 tcacccttaccttaaattgatcgacgaagga 198  Q
     ||||||||||||| ||||||||||||||||    
T  19434572 ccacccttaccttagattgatcgacgaagga 19434542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 9870568 - 9870427
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattaga 156  Q
    ||||||||||||||||| || ||||||| ||||||||| || |||||||||||||| ||||  |||  |||||| ||||||||||||| || ||||||      
T  9870568 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacctacatcatgtcaaatccaattttcagaattatacaacttagaattatg 9870469  T
Q  157 gaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||| |||||||| |||| ||||||||||||||||    
T  9870468 gaaagttagtcccacccttagcttagattgatcgacgaagga 9870427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 21144 - 21248
Alignment:
Q  78 aacctaattcccaaattctcataactacaacctacaacatgctaaactcaatt-tcagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    |||||||||| ||||| |||| ||||||||||||||||||| |||| |||||| |||||||||||||| || |||||| |||| |||||||||| |||||    
T  21144 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaattcaattctcagaattatacaacttagaattaaagaaggttagtctcatcctta 21243  T
Q  177 cctta 181  Q
    |||||    
T  21244 cctta 21248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 26921774 - 26921708
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatt 94  Q
    ||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26921774 cacaaattcattggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaatt 26921708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 15613061 - 15613142
Alignment:
Q  100 aactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||| ||||||||||| ||||  ||||||||||||||||||| || |||||| |||| ||||||| |||||||||||||    
T  15613061 aactacatcctacaacatgttaaatccaatttcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 15613142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 51993532 - 51993613
Alignment:
Q  100 aactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||| ||||||||||| ||||  |||||||||||||| |||| || |||||| |||| ||||||| |||||||||||||    
T  51993532 aactacatcctacaacatgttaaatccaatttcagaattacacaacttagaattaaagaaggttagtcccacccttacctta 51993613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 2424439 - 2424387
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||| |||||||||| || |||||||||||||||||||||||||||||||||    
T  2424439 tttcaaaattatacaacttagaattagagaaagttagtctcacccttacctta 2424387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 14631157 - 14631204
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  14631157 attagagaaagctagtctcacccttaccttagattgatcgacgaagga 14631204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 16296938 - 16297007
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    |||||||||||||||| |    ||||||||||| ||||| ||||||||||||| ||||||||||||||||    
T  16296938 tttcagaattatacaactcattattagagaaagctagtcccacccttaccttagattgatcgacgaagga 16297007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 138
Target Start/End: Original strand, 27028642 - 27028754
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaact-tcaaaacctaattcccaaattctcataactacaacctacaacatgctaaac 124  Q
    ||||||||||| | |||||||||| || ||||||||| |||| ||| | |||||||||||||||||| | |||| || | | | | |||||||| |||||    
T  27028642 tacacaaattctatggattttctattcaattaacaactaattgcaattctcaaaacctaattcccaattcctca-aattcccaaccacaacatgttaaac 27028740  T
Q  125 tcaatttcagaatt 138  Q
    ||||||| ||||||    
T  27028741 tcaattttagaatt 27028754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 35811428 - 35811375
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaa 182  Q
    ||||| |||||||| | || ||||||||||||||||||| ||||||||||||||    
T  35811428 tttcaaaattataccacttagaattagagaaagttagtcccacccttaccttaa 35811375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 10694297 - 10694241
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||| |  | || |||||||||||| ||||||||||||||||||||||||    
T  10694297 tttcagaattaaattacttagaattagagaaatttagtctcacccttaccttaaatt 10694241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 10908063 - 10908007
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||| |  | || |||||||||||| ||||||||||||||||||||||||    
T  10908063 tttcagaattaaattacttagaattagagaaatttagtctcacccttaccttaaatt 10908007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 181
Target Start/End: Original strand, 21062593 - 21062693
Alignment:
Q  82 taattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcacccttacctt 180  Q
    |||||| ||||| |||| ||||||||||||| || || ||||  |||||| || | |||||  | || ||||||||||||||||||| ||||||||||||    
T  21062593 taattctcaaatcctcaaaactacaacctaccacttgttaaatccaattttcatagttataacacttagaattagagaaagttagtcccacccttacctt 21062692  T
Q  181 a 181  Q
    |    
T  21062693 a 21062693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 15225581 - 15225619
Alignment:
Q  158 aaagttagtctcacccttaccttaaattgatcgacgaag 196  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  15225581 aaagttagtctcacccttaccttggattgatcgacgaag 15225619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 9638939 - 9638972
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaa 92  Q
    ||||||||||||||||| ||||||||||||||||    
T  9638939 caaccaattacaacttctaaacctaattcccaaa 9638972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Original strand, 14186955 - 14187010
Alignment:
Q  125 tcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||||| |||||  || |||||||||||||||| || |||||||||||||    
T  14186955 tcaatttcagaatcatacac-ttagaattagagaaagttactcccacccttacctta 14187010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 15008963 - 15009015
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||| |  | || ||||||||||||||||||| |||||||||||||    
T  15008963 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 15009015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 15239846 - 15239810
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaattga 187  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  15239846 attagagaaagctagtctcacccttaccttagattga 15239810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 151; Significance: 5e-80; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 3069 - 3251
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3069 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 3168  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    || ||||| |||||||||||||||||||| || |||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  3169 atactaaagtcaatttcagaattatacaacttagaattagagaaagttagtccaacccttaccttagattgatcgacgaagga 3251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 2451 - 2558
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2451 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 2550  T
Q  116 atgctaaa 123  Q
    ||||||||    
T  2551 atgctaaa 2558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 151; Significance: 5e-80; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 15890877 - 15890695
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||    
T  15890877 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattaacaaaactacaacctacaac 15890778  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||| ||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  15890777 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattgatcgacgaagga 15890695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 7827859 - 7828028
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7827859 acatcaattctacacaaattcaaccgattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 7827958  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  7827959 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 7828028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 19655396 - 19655227
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19655396 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 19655297  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  19655296 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 19655227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 23150452 - 23150283
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23150452 acatcaattctacacaaattcaacaaattttatactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 23150353  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  23150352 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 23150283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 27125642 - 27125473
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  27125642 acatcacttctatacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaagtcccaaattcccataactacaacctacaac 27125543  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||| |||||||| ||| |||||||| || |||||||||||||||||||||||||||||||||||||    
T  27125542 atgctaatctcaattttagacttatacaacttagaattagagaaagttagtctcacccttaccttaaatt 27125473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 18703451 - 18703624
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaatt----acaacttcaaaacctaattcccaaattctcataactacaaccta 111  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||    |||||||||||| ||||||||||||||| |||||||||||||||    
T  18703451 acatcacttctatacaaattcaacggattttctactctattaacaaccaattaattacaacttcaaaatctaattcccaaattcccataactacaaccta 18703550  T
Q  112 caacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    |||||| |||||||||||||||||||||||||| || ||||||||||||||||||| ||| |||||||||||||    
T  18703551 caacattctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacacttaccttaaatt 18703624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 18709386 - 18709559
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaatt----acaacttcaaaacctaattcccaaattctcataactacaaccta 111  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||    |||||||||||| ||||||||||||||| |||||||||||||||    
T  18709386 acatcacttctatacaaattcaacggattttctactctattaacaaccaattaattacaacttcaaaatctaattcccaaattcccataactacaaccta 18709485  T
Q  112 caacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    |||||| |||||||||||||||||||||||||| || ||||||||||||||||||| ||| |||||||||||||    
T  18709486 caacattctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacacttaccttaaatt 18709559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 27330131 - 27329981
Alignment:
Q  31 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatt 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  27330131 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattgccataactacaacctacaacatgttaaactcaatt 27330032  T
Q  131 tcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||||||  | ||||||||||||||||||| ||| |||||||||    
T  27330031 tcagaattatacaacctagaattagagaaagttagtcacactcttacctta 27329981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 31 - 181
Target Start/End: Complemental strand, 27390871 - 27390721
Alignment:
Q  31 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatt 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  27390871 aaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattgccataactacaacctacaacatgttaaactcaatt 27390772  T
Q  131 tcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||||||  | ||||||||||||||||||| ||| |||||||||    
T  27390771 tcagaattatacaacctagaattagagaaagttagtcacactcttacctta 27390721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 180
Target Start/End: Original strand, 24267801 - 24267900
Alignment:
Q  81 ctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctt 180  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||    
T  24267801 ctaattctcaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacctt 24267900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 188
Target Start/End: Original strand, 28948466 - 28948634
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatt-ctcataactacaacctacaacatgc 119  Q
    |||||||||| ||||||||  |||||||||| |   ||||||||||||||||||| |||||||||||||||||| || | | ||||||| ||| || ||     
T  28948466 aattctacaccaattcaacatattttctactattaaaacaaccaattacaacttctaaacctaattcccaaatttctaaaacctacaacttaccacttgt 28948565  T
Q  120 taaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgat 188  Q
    ||||  || ||||||||| |||||| || ||||||||||||||||||||||||||||||||| ||||||    
T  28948566 taaatccagtttcagaatcatacaacttagaattagagaaagttagtctcacccttaccttagattgat 28948634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 19235015 - 19235180
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgc 119  Q
    ||||| ||||||| ||||| |||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| || |   |||| | ||||||| |    
T  19235015 caattgtacacaagttcaatggattttctactttattaacaaccaattacgacttcaaaacctaa-tcccaaattcacaaattcacaaacaacaacatcc 19235113  T
Q  120 taaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattg 186  Q
    |||| ||||||||||||||||||||  |  ||||||||||||||| || |||||||| |||| ||||    
T  19235114 taaaatcaatttcagaattatacaacctaaaattagagaaagttaatcccacccttaacttagattg 19235180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 63 - 198
Target Start/End: Original strand, 18928614 - 18928750
Alignment:
Q  63 caattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaag 161  Q
    ||||||||||||| |||||||||| |||||||| || |||| ||||||||||| || |||| ||||||| ||||||||||| | || |||||||||||||    
T  18928614 caattacaacttctaaacctaatttccaaattcccaaaacttcaacctacaacttgttaaattcaattttcagaattataccacttagaattagagaaag 18928713  T
Q  162 ttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||  |||||||||||| ||| ||||||||||||    
T  18928714 ttagtcctacccttaccttagattcatcgacgaagga 18928750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 57 - 188
Target Start/End: Original strand, 18585733 - 18585864
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattaga 156  Q
    ||||||||||||||||||| |||||||||||| |||||  || ||||||||||||| || || ||||  || ||||||||| |||||| || ||||||||    
T  18585733 aacaaccaattacaacttctaaacctaattcctaaatttccaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 18585832  T
Q  157 gaaagttagtctcacccttaccttaaattgat 188  Q
    ||||||||||| |||||||||| || ||||||    
T  18585833 gaaagttagtcccacccttaccatatattgat 18585864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 186
Target Start/End: Complemental strand, 30673556 - 30673397
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaacc-aattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatg 118  Q
    ||||| ||||||||||||| | |||||||||||||||||||||| |||||| | |||||||||||||||| ||||||        |||| | ||| ||||    
T  30673556 caattgtacacaaattcaatgaattttctactctattaacaaccaaattactaattcaaaacctaattccaaaattc--------acaaacaacatcatg 30673465  T
Q  119 ctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattg 186  Q
    ||||||||||||||| ||||||||||  |  ||||||||||||||| || ||||||||||||| ||||    
T  30673464 ctaaactcaatttcaaaattatacaacctaaaattagagaaagttaatcccacccttaccttagattg 30673397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 19167998 - 19167926
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaa 92  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19167998 caattgtacacaaattcaatggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaa 19167926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 80 - 182
Target Start/End: Complemental strand, 27572223 - 27572121
Alignment:
Q  80 cctaattcccaaattctcataactacaacctacaac-atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacc 178  Q
    |||||||| |||||||| | ||||  |||||||||| ||| |||| |||||||||||||||||| | || ||||||||||||||||||||||||||||||    
T  27572223 cctaattctcaaattctaa-aactttaacctacaaccatgttaaattcaatttcagaattatacgacttagaattagagaaagttagtctcacccttacc 27572125  T
Q  179 ttaa 182  Q
    ||||    
T  27572124 ttaa 27572121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 19401028 - 19401147
Alignment:
Q  63 caattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattagagaaag 161  Q
    ||||||||||||  ||||||||||| ||||||| || |||||||||||||||| || |||| |||| ||||||||| |||| | || ||||||| ||| |    
T  19401028 caattacaacttataaacctaattctcaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagtgaagg 19401126  T
Q  162 ttagtctcacccttaccttaa 182  Q
    |||||| ||||||||||||||    
T  19401127 ttagtcccacccttaccttaa 19401147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 191
Target Start/End: Original strand, 23501601 - 23501734
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaa-ttctcataactacaacctacaacatgctaaactca-atttcagaattatacaaatttgaattaga 156  Q
    |||| |||||||||||| |||||||||||||||| |||  | |||||||||||||||| || |||| |||  ||||||||||| || | || ||||||      
T  23501601 caacaaattacaacttctaaacctaattcccaaatttccaaaaactacaacctacaacttgttaaattcagttttcagaattaaac-atttagaattatt 23501699  T
Q  157 gaaagttagtctcacccttaccttaaattgatcga 191  Q
    ||| ||||||||||||||||||||| |||||||||    
T  23501700 gaaggttagtctcacccttaccttagattgatcga 23501734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 181
Target Start/End: Original strand, 15998880 - 15998941
Alignment:
Q  120 taaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||  |||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  15998880 taaactctttttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 15998941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 181
Target Start/End: Complemental strand, 31732009 - 31731904
Alignment:
Q  77 aaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcaccctt 175  Q
    ||||||||||| ||||| | || |||||||||||||||| ||  |||  |||||| ||||||||||  | || ||||| ||||||||||||| |||||||    
T  31732009 aaacctaattctcaaatccccaaaactacaacctacaacttgtcaaatccaattttcagaattataacacttagaattggagaaagttagtcccaccctt 31731910  T
Q  176 acctta 181  Q
    ||||||    
T  31731909 acctta 31731904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 198
Target Start/End: Complemental strand, 19772767 - 19772649
Alignment:
Q  80 cctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcacccttacc 178  Q
    |||||||||||||| |||| ||||| ||||||||||||| ||||  |||||| |||||||| |  | || ||||||  ||| | ||||| ||||||||||    
T  19772767 cctaattcccaaatcctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacc 19772669  T
Q  179 ttaaattgatcgacgaagga 198  Q
    ||  ||||||||||||||||    
T  19772668 ttggattgatcgacgaagga 19772649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 18259328 - 18259262
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaact-tcaaaacctaattcccaa 91  Q
    ||||||||||| | |||||||||| || ||||||||| |||||||| | ||||||||||||||||||    
T  18259328 tacacaaattctatggattttctattcaattaacaactaattacaattctcaaaacctaattcccaa 18259262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 24550249 - 24550168
Alignment:
Q  100 aactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||| ||||||||||| ||||  |||||||||||||| |||| ||  ||||| ||||  |||||| |||||||||||||    
T  24550249 aactacatcctacaacatgttaaatccaatttcagaattacacaacttacaattaaagaagtttagtcccacccttacctta 24550168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 12041672 - 12041620
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||||||||||| || |||||| |||| ||||||| |||||||||||||    
T  12041672 tttcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 12041620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 27324735 - 27324695
Alignment:
Q  158 aaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  27324735 aaagttagtctcacccttaccttggattgatcgacgaagga 27324695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 19167923 - 19167848
Alignment:
Q  111 acaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattg 186  Q
    ||||||||||||||||||| ||||||||||||||  |   |||||| ||||||| |  ||||||||||||| ||||    
T  19167923 acaacatgctaaactcaatatcagaattatacaacctaatattagacaaagttaattccacccttaccttagattg 19167848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 16624833 - 16624871
Alignment:
Q  158 aaagttagtctcacccttaccttaaattgatcgacgaag 196  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  16624833 aaagttagtctcacccttaccttggattgatcgacgaag 16624871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 15900706 - 15900654
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||| |  | || ||||||||||||||| |||||||||||||||||    
T  15900706 tttcagaattaaaatacttagaattagagaaagttggtctcacccttacctta 15900654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 26923761 - 26923709
Alignment:
Q  80 cctaattcccaaattctcataa-ctacaacctacaacatgctaaactcaattt 131  Q
    ||||||||||||||||||| || ||| ||||||||||||| |||| |||||||    
T  26923761 cctaattcccaaattctcaaaaactaaaacctacaacatgttaaattcaattt 26923709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 11439 - 11270
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  11439 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacttaattcccaaattcccataactacaacctacaac 11340  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||    
T  11339 atgctaaactcaatttcagaaatatacaacttagaattagagaaagttagtctcacccttaccttaaatt 11270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 13557 - 13382
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  13557 acatcaattctacacaaattcaacggattttctactctattaacaaccaattataacttcaaaacctaattcccaaattcccaaaactacaacctacaac 13458  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcga 191  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||| |||||||||    
T  13457 atgctaaactcaatttcagaattatacaacttggaattagagaaagttagtcccacccttaccttagattgatcga 13382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 148; Significance: 3e-78; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 143498 - 143677
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||   ||||||||||||||||||    
T  143498 acatcaattctacacaaattcaacgaattttctactctattaacaaccaattacaacttcaaaacataattcccaaattaaaataactacaacctacaac 143597  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaa 195  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||    
T  143598 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcacacccttaccttaaattgatcgacgaa 143677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 169164 - 168999
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  169164 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaagttcaaaacctaattcccaaattcccataactacaacctacaac 169065  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||| |||||||    
T  169064 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccctacctta 168999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 633 - 464
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  633 acatcaattctacacaaattcaacttattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 534  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  533 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 1092 - 1261
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  1092 acatcaattctacacaaattcaacggattttctattctattaacaaccaattacaacttcaaaacctaattcccaaattacaataactacaacctacaac 1191  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  1192 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttaccttaaatt 1261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 4879 - 4710
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  4879 acatcacttctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacgacctacaac 4780  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||  ||||||||||||||||    
T  4779 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtccgacccttaccttaaatt 4710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 177
Target Start/End: Complemental strand, 5941 - 5821
Alignment:
Q  59 caaccaattacaacttcaaaacctaattc-ccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattaga 156  Q
    ||||||||| ||||||| || |||||||  ||||||||| | |||||||||| ||||| ||  |||  |||||| |||||||| |||| || ||||||      
T  5941 caaccaatttcaacttctaaccctaattttccaaattctgaaaactacaacccacaacctgtcaaatccaattttcagaattacacaacttagaattaag 5842  T
Q  157 gaaagttagtctcacccttac 177  Q
    ||||||||||||||| |||||    
T  5841 gaaagttagtctcacacttac 5821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 34226 - 34395
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  34226 acatcaattctacacaaattcaacaaattttctactctattaacaaccaattacaacttcaaaacctgattcccaaattcccataactacaacctacaac 34325  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  34326 atgctaaactcaatttcagaattaaacaaattagaattagagaaagttagtcccacccttaccttaaatt 34395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 5921 - 6002
Alignment:
Q  100 aactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||| ||||||||||| |||| |||||||||||||||||||| || |||||| |||| ||||||| |||||||||||||    
T  5921 aactacatcctacaacatgttaaattcaatttcagaattatacaacttagaattaaagaaggttagtcccacccttacctta 6002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 142; Significance: 1e-74; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 77574 - 77739
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  77574 acatcaattatacacaaattcaacggattttctactctattaacaacctattacaacttcaaaacctaattctcaaattcccataactacaacctacaac 77673  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  77674 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 77739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 31881 - 32050
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  31881 acatcacttctacacaaattcaacgaattttctgctctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataac 31980  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  31981 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcacacccttaccttaaatt 32050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 185
Target Start/End: Original strand, 37188 - 37357
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  37188 acatcacttctacacaaattcaacgaattttctgctctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataac 37287  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||    
T  37288 atgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcacacccttaccttaaatt 37357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 146610 - 146785
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  146610 acatcaattctacacaaattcaacggatttcctactctattaacaaccaattataacttcaaaacctaattcccaaattcccataactacaacctacaac 146709  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcga 191  Q
    ||||||||||||||||||||||||||||| || ||||||||| ||||||||| ||||| ||||||| |||||||||    
T  146710 atgctaaactcaatttcagaattatacaacttagaattagagtaagttagtcccacccataccttagattgatcga 146785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 58633 - 58799
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  58633 acatcaattctatacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaac 58732  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaa 182  Q
    ||||||||||||||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||    
T  58733 atgctaaactcaatttcagaattgtacaacttagaattagagaaagttagtcccacccttaccttaa 58799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 861 - 696
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  861 acatcaattctacacaaattcaacggattttctactctattaacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac 762  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||| ||||||||||||||||||||||||| || ||||||||||||||||||| ||||| |||||||    
T  761 atgttaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccctacctta 696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 135; Significance: 2e-70; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 16 - 178
Target Start/End: Original strand, 5270 - 5432
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  5270 acatcaattctacacaaattcaaaggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaattcccataactacaacctacaac 5369  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacc 178  Q
    |||||||||| |||||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  5370 atgctaaacttaatttcagaattatacaacttagaattagagaaagttagtcccacccttacc 5432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 21 - 180
Target Start/End: Complemental strand, 12693 - 12534
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgct 120  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  12693 aattctatacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctataacatgct 12594  T
Q  121 aaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctt 180  Q
    |||||||||||||||||||||||| || |||||||||||||||| || ||||||||||||    
T  12593 aaactcaatttcagaattatacaacttagaattagagaaagttattcccacccttacctt 12534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 181
Target Start/End: Original strand, 1052 - 1217
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  1052 acatcaattctacacaaattcaacggattttctattctattaacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctaaaac 1151  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||| |||||||||||||||||||| || |||||||  |||||||||| |||||||||||||    
T  1152 atgctaaattcaatttcagaattatacaacttagaattaggaaaagttagtcacacccttacctta 1217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 2e-67; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 20566445 - 20566615
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgc 119  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  20566445 caattctacacaaattctacggattttctattctattaacaaccaattacaacttcaaaacctaattccca--------taactacaacctacaacatgc 20566536  T
Q  120 taaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  20566537 taaactcaatttcagaattatacaactttgaattagagaaagttagtctcacccttaccttagattgattgacgaagga 20566615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 7484903 - 7485050
Alignment:
Q  30 caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaat 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7484903 caaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattctcataactacaacctacaacatgctaaactcaat 7485002  T
Q  130 ttcagaattatacaaatttgaattagagaaagttagtctcacccttac 177  Q
    |||||||||||||||  | ||||||||||||||||||| |||||||||    
T  7485003 ttcagaattatacaacgtagaattagagaaagttagtcccacccttac 7485050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 21300209 - 21300044
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||    
T  21300209 acatcaattctacacaaatttaacagattttctactctattaacaaccaattacaacttcaaaacctaattctcaaattcccataactactacctacaac 21300110  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||||| |||||||||||||||||| ||  |||||||||||||||||| |||||||||||||    
T  21300109 atgctaaacttaatttcagaattatacaacttaaaattagagaaagttagtcccacccttacctta 21300044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 19921525 - 19921676
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||  ||||| |||||||||||||    
T  19921525 acatcaattctacacaaattcaacagattttctactctattaacaactaattataacttcaaaacctaattcccaaatttccataattacaacctacaac 19921624  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtc 167  Q
    ||| ||||||||||||||||||||||||| || ||||||||||||| |||||    
T  19921625 atgttaaactcaatttcagaattatacaacttagaattagagaaaggtagtc 19921676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 57 - 198
Target Start/End: Complemental strand, 36508757 - 36508616
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattaga 156  Q
    ||||||||||||||||||| |||| |||||||||||||  || ||||||||||||| || || ||||  || ||||||||| |||||| || ||||||||    
T  36508757 aacaaccaattacaacttctaaacataattcccaaatttccaaaactacaacctaccacctgttaaatccattttcagaatcatacaacttagaattaga 36508658  T
Q  157 gaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  36508657 gaaagttagtctcacccttaccttaaattaatcgacgaagga 36508616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 31622028 - 31622169
Alignment:
Q  32 aattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt 131  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||        ||||| | |||||||||||||||||||||    
T  31622028 aattcaatggattttctactctattaacaaccaattacgacttcaaaacctaattcccaaatt--------tacaaacaacaacatgctaaactcaattt 31622119  T
Q  132 cagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||||||||  |  ||||||||||||||| || |||||||||||||    
T  31622120 cagaattatacaacctaaaattagagaaagttaatcccacccttacctta 31622169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 31456888 - 31457012
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattaga 156  Q
    ||||||||||||||||||| |||||||||| |||||||  || |||||||||||||    || ||||  || ||||||||| |||| | ||  |||||||    
T  31456888 aacaaccaattacaacttctaaacctaatttccaaatttccaaaactacaacctaccttgtgttaaatccagtttcagaatcataccacttaaaattaga 31456987  T
Q  157 gaaagttagtctcacccttacctta 181  Q
    |||||||||||||||||||||||||    
T  31456988 gaaagttagtctcacccttacctta 31457012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 6551342 - 6551280
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcga 191  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||    
T  6551342 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagattgatcga 6551280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 21618047 - 21617918
Alignment:
Q  63 caattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattagagaaag 161  Q
    ||||| ||||||| || |||||||| ||||||| || |||||||||||||||| || |||| |||| ||| ||| |||||  | || |||||||||||||    
T  21618047 caatttcaacttctaaccctaattctcaaattcccaaaactacaacctacaacttgttaaattcaatttttagagttatatcacttagaattagagaaag 21617948  T
Q  162 ttagtctcacccttaccttaaattgatcga 191  Q
    |||||| ||||||||||||| ||| |||||    
T  21617947 ttagtcccacccttaccttagatttatcga 21617918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 191
Target Start/End: Complemental strand, 20469281 - 20469166
Alignment:
Q  77 aaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcaccctt 175  Q
    ||||||||||| ||| | | || |||||||||||||||| || ||||  |||||| |||| |||||  | || ||||||||||||||||||| |||||||    
T  20469281 aaacctaattctcaagtccccaaaactacaacctacaacttgttaaatccaattttcagagttatatcacttagaattagagaaagttagtcccaccctt 20469182  T
Q  176 accttaaattgatcga 191  Q
    |||||| |||||||||    
T  20469181 accttagattgatcga 20469166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 22111762 - 22111881
Alignment:
Q  63 caattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagt 162  Q
    ||||||| |||| |||||||||||| ||||||| || |   |||| | ||||||||||||||||||||||| ||||||||||     |||||||||||||    
T  22111762 caattacgacttgaaaacctaattctcaaattcgcaaattcacaaacaacaacatgctaaactcaatttcaaaattatacaaccaaaaattagagaaagt 22111861  T
Q  163 tagtctcacccttaccttaa 182  Q
    || || ||||||||| ||||    
T  22111862 taatcccacccttacgttaa 22111881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 112
Target Start/End: Original strand, 17876132 - 17876186
Alignment:
Q  58 acaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctac 112  Q
    |||||||||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  17876132 acaaccaattacaacttctaaacctaattcccaaattttcagaactacaacctac 17876186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 31252011 - 31251931
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattata 141  Q
    |||||||| |||||| ||||||||||| |||||||  | |||||||||||| ||| || ||||  ||||||||||||||||    
T  31252011 accaattataacttctaaacctaattctcaaattcctaaaactacaacctataacctgttaaatccaatttcagaattata 31251931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 181
Target Start/End: Complemental strand, 10774771 - 10774664
Alignment:
Q  73 ttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcac 171  Q
    |||||| |||||||||| ||||| || |||||||| ||||| |||| |||| ||||||| |||||| |||||  || ||||||| ||| ||||||| |||    
T  10774771 ttcaaaccctaattcccgaattcacaaaactacaatctaca-catgttaaattcaattttcagaatcatacac-ttagaattagtgaaggttagtcccac 10774674  T
Q  172 ccttacctta 181  Q
    ||||||||||    
T  10774673 ccttacctta 10774664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 10954060 - 10954141
Alignment:
Q  100 aactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||| ||||||||||| ||||  |||||||| ||||| |||| || ||||||  ||| ||||||| |||||||||||||    
T  10954060 aactacatcctacaacatgttaaatccaatttcataattacacaacttagaattaaggaaggttagtcccacccttacctta 10954141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 21405751 - 21405678
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattctcataactacaacctacaacatgctaaactcaattt 131  Q
    ||||||||||||||||| || ||||||| ||||||||| || |||||||||| ||||| || |||| |||||||    
T  21405751 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacccacaacctgttaaattcaattt 21405678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 22111715 - 22111764
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaa 77  Q
    ||||||||||  ||||||||| |||||||||||||||||||| |||||||    
T  22111715 cacaaattcattggattttctgctctattaacaaccaattacgacttcaa 22111764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 18744896 - 18744936
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaattgatcga 191  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  18744896 attagagaaagttagtcccacccttaccttagattgatcga 18744936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 10753867 - 10753905
Alignment:
Q  158 aaagttagtctcacccttaccttaaattgatcgacgaag 196  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  10753867 aaagttagtctcacccttaccttggattgatcgacgaag 10753905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 91
Target Start/End: Complemental strand, 30138098 - 30138064
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaa 91  Q
    ||||||||||||||||||| |||||||||||||||    
T  30138098 aacaaccaattacaacttctaaacctaattcccaa 30138064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 266038 - 266091
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaa 182  Q
    ||||||||||| |  | || ||||||||||||||||||| ||||||||||||||    
T  266038 tttcagaattaaattacttagaattagagaaagttagtcccacccttaccttaa 266091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 73 - 110
Target Start/End: Complemental strand, 21554403 - 21554366
Alignment:
Q  73 ttcaaaacctaattcccaaattctcataactacaacct 110  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  21554403 ttcaaaccctaattcccaaattctcaaaactacaacct 21554366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 30616614 - 30616663
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacc 178  Q
    ||||||||| |||||| || |||||||||||||| |||| ||||||||||    
T  30616614 tttcagaatcatacaacttagaattagagaaagtcagtcccacccttacc 30616663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 17011728 - 17011780
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||| |  | || ||||||||||||||||||| |||||||||||||    
T  17011728 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 17011780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 25249931 - 25249828
Alignment:
Q  78 aacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    |||||||||| ||| | |||| ||||| ||||||||||||| ||||  |||||| |||||||||| || ||  ||||| |||| |||||||  |||||||    
T  25249931 aacctaattctcaa-tcctcaaaactataacctacaacatgttaaatccaattttcagaattatataacttaaaattaaagaaggttagtcctaccctta 25249833  T
Q  177 cctta 181  Q
    |||||    
T  25249832 cctta 25249828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 25313715 - 25313612
Alignment:
Q  78 aacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    |||||||||| ||| | |||| ||||| ||||||||||||| ||||  |||||| |||||||||| || ||  ||||| |||| |||||||  |||||||    
T  25313715 aacctaattctcaa-tcctcaaaactataacctacaacatgttaaatccaattttcagaattatataacttaaaattaaagaaggttagtcctaccctta 25313617  T
Q  177 cctta 181  Q
    |||||    
T  25313616 cctta 25313612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 21958 - 21789
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  21958 acatcaattctacacaaattcaacttattttttactctattaacaaccaattacaacttcaaaacctaattcccaaattcccataaatacaacctacaac 21859  T
Q  116 atgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    |||||||| |||||||||||| ||||||| || |||||||||||| |||||| |||| ||||||||||||    
T  21858 atgctaaattcaatttcagaactatacaacttagaattagagaaatttagtcccaccattaccttaaatt 21789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 121; Significance: 4e-62; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 328455 - 328288
Alignment:
Q  16 acatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||| || ||||    
T  328455 acatcaattctacacaaattcaactgattttctactctattaacaaccaattacaacttcgaaacctaattcccaaatttccataactacaatcttcaac 328356  T
Q  116 atgctaaactcaatttcagaattatacaaatt--tgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||||||||||||||||||||| ||   ||||||||||||||||||| |||||||||||||    
T  328355 atgctaaactcaatttcagaattatacaacttagagaattagagaaagttagtcccacccttacctta 328288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 28 - 182
Target Start/End: Original strand, 75691 - 75839
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactca 127  Q
    ||||||||||| |||||||||| |||||||||||||||||||||      |||||||||||||||||| || |  ||||| | ||||||||||| |||||    
T  75691 cacaaattcaatggattttctattctattaacaaccaattacaa------aacctaattcccaaattcacaaatttacaaacaacaacatgctacactca 75784  T
Q  128 atttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaa 182  Q
    |||||||||||||||||  |   |||||||||||||| || ||||||||| ||||    
T  75785 atttcagaattatacaacctaagattagagaaagttaatcccacccttacgttaa 75839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 72841 - 72910
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattc 95  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  72841 tacacaaattcaatggattttctattctattaacaaccaattacaacttcaaaacctaattcacaaattc 72910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 182
Target Start/End: Original strand, 110121 - 110227
Alignment:
Q  77 aaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcaccctt 175  Q
    ||||||||| | ||||| | || |||||||||||||||| || |||| ||||||| ||||||||||  | || |||||||||||||||||||||||||||    
T  110121 aaacctaatcctcaaatccccaaaactacaacctacaacttgttaaattcaattttcagaattatatcacttagaattagagaaagttagtctcaccctt 110220  T
Q  176 accttaa 182  Q
    || ||||    
T  110221 acgttaa 110227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 114; Significance: 7e-58; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 42 - 195
Target Start/End: Complemental strand, 29711 - 29559
Alignment:
Q  42 attttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattata 141  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  29711 attttctac-ctatttacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacgacatgctaaactcaatttcagaattata 29613  T
Q  142 caaatttgaattagagaaagttagtctcacccttaccttaaattgatcgacgaa 195  Q
    ||| || |||||| |||||||||||| ||||||||||||| |||||||||||||    
T  29612 caacttagaattatagaaagttagtcccacccttaccttagattgatcgacgaa 29559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 191
Target Start/End: Original strand, 21539 - 21673
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattaga 156  Q
    ||||||||||||||||||| |||| |||||||||||||  || |||||||| |||| |  || ||||  || |||| |||| |||||| || ||||||||    
T  21539 aacaaccaattacaacttctaaacataattcccaaatttccaaaactacaagctaccatctgttaaatccagtttctgaatcatacaacttagaattaga 21638  T
Q  157 gaaagttagtctcacccttaccttaaattgatcga 191  Q
    ||||| ||||| ||||||||||||| |||||||||    
T  21639 gaaagctagtcccacccttaccttagattgatcga 21673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 19652 - 19810
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgc 119  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||| |||||||| |||    
T  19652 caattctacacaaattcaatggattttctactctattaacaaccaattacaacttaaaaacctaattcccaaattc--------acagcctacaacttgc 19743  T
Q  120 taaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattg 186  Q
    |||||||||||| |||||||||||| || |||||||||||||| |||||||||||||||||| ||||    
T  19744 taaactcaatttgagaattatacaacttagaattagagaaagtcagtctcacccttaccttagattg 19810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 198
Target Start/End: Original strand, 35418 - 35559
Alignment:
Q  55 ttaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaatta 154  Q
    ||||||||||||||| ||||||||||||||||||||||||| || |||||  |||||||||||||||||||||||||||||||||||||| || ||||||    
T  35418 ttaacaaccaattacgacttcaaaacctaattcccaaattcccaaaacta--acctacaacatgctaaactcaatttcagaattatacaacttagaatta 35515  T
Q  155 gagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||||||||||||||||||| |||||||  |||||||    
T  35516 gagaaagttagtctcacccttaccttagattgatcatcgaagga 35559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 78298 - 78181
Alignment:
Q  68 acaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtc 167  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  78298 acaacttcaaaacctaatttccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtc 78199  T
Q  168 tcacccttaccttaaatt 185  Q
     |||||||||||||||||    
T  78198 ccacccttaccttaaatt 78181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 78955 - 79105
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgc 119  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||        |||||||       |||||||    
T  78955 caattctacacaaattcaatggattttctactttattaacaaccaattacaacttcaaaacctaattccca--------taactac-------aacatgc 79039  T
Q  120 taaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaatt 185  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  79040 taaactcaatttcagaattatacaacttagaattagagaaagttagtctcacccttaccttaaatt 79105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 24235 - 24127
Alignment:
Q  77 aaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||    
T  24235 aaacctaattcccaaattcccataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccaccctta 24136  T
Q  177 ccttaaatt 185  Q
    |||||||||    
T  24135 ccttaaatt 24127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 198
Target Start/End: Original strand, 30023 - 30140
Alignment:
Q  81 ctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcacccttacct 179  Q
    ||||||||||||| |||| ||||| ||||||||||||| ||||  |||||| |||||||| |  | || || |||  ||| ||||||| |||||||||||    
T  30023 ctaattcccaaatcctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagatttattgaaggttagtcccacccttacct 30121  T
Q  180 taaattgatcgacgaagga 198  Q
    |  ||||||||||||||||    
T  30122 tggattgatcgacgaagga 30140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 74; Significance: 5e-34; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 191
Target Start/End: Complemental strand, 113127 - 112956
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgct 120  Q
    |||||||||| ||||||||  |||||||||| | | ||||||||||||||||||| ||||||||||||||||||| || || ||||||||||||| || |    
T  113127 aattctacaccaattcaacaaattttctactgt-taaacaaccaattacaacttctaaacctaattcccaaattcccaaaattacaacctacaacttgtt 113029  T
Q  121 aaactcaa--tttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattgatcga 191  Q
    ||| ||||  ||||||| |||||  | || ||||||||||||||||||| |||||||| |||| |||||||||    
T  113028 aaattcaatttttcagagttatatcacttagaattagagaaagttagtcccacccttatcttagattgatcga 112956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 81501 - 81620
Alignment:
Q  63 caattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttc-agaattatacaaatttgaattagagaaag 161  Q
    ||||||||||||| ||||||||||||||||||| || |||||||||||||||| || |||| |||||||  ||||| || ||  || ||||||| ||| |    
T  81501 caattacaacttctaaacctaattcccaaattcccaaaactacaacctacaacctgttaaattcaatttttagaatcatccat-ttagaattagtgaagg 81599  T
Q  162 ttagtctcacccttaccttaa 182  Q
    |||||| ||||||||||||||    
T  81600 ttagtcccacccttaccttaa 81620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 117960 - 117807
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgct 120  Q
    |||||||| | |||||||  ||||||||||| | | ||||||||||||||||||| |||||||||||||||        || ||||| || |||| || |    
T  117960 aattctacgccaattcaatagattttctactgt-taaacaaccaattacaacttctaaacctaattcccaa--------aattacaatcttcaacttgtt 117870  T
Q  121 aaactcaa--tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||| ||||  ||||||| |||||  | || ||||||||||||||||||| |||||||||||||    
T  117869 aaattcaatttttcagagttatatcacttagaattagagaaagttagtcccacccttacctta 117807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 2787 - 2946
Alignment:
Q  20 caattctacacaaattcaacggattttctactctattaacaaccaatt-acaacttcaaaacctaattcccaaattctcataactacaacctacaacatg 118  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||| || | ||||||||||||||| |||||||        |||| | ||||||||    
T  2787 caattatacacaaattcaaaggattttctattctattaacaaccaatttactaattcaaaacctaattcacaaattc--------acaaacaacaacatg 2878  T
Q  119 ctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattg 186  Q
    ||||||||||||||||||||||||||  |  ||||||||||||||| || ||||||||||||| ||||    
T  2879 ctaaactcaatttcagaattatacaacctaaaattagagaaagttaatcccacccttaccttagattg 2946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 2520 - 2604
Alignment:
Q  94 tctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacc 178  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  2520 tctnataactacaacctacaacatgctaaactcaatttcagaattatacaacttagaattagagaaagttagtcccacccttacc 2604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 61 - 198
Target Start/End: Complemental strand, 4830 - 4692
Alignment:
Q  61 accaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaa 159  Q
    |||||| |||||||| |||||||||| ||||||||    |||| ||||||||||| || |||| ||||||| ||||||||||| | || |||||||||||    
T  4830 accaatgacaacttctaaacctaatttccaaattccacaaacttcaacctacaacttgttaaattcaattttcagaattatactacttagaattagagaa 4731  T
Q  160 agttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  4730 agttagtcccacccttaccttagattgatcgacgaagga 4692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 198
Target Start/End: Complemental strand, 106175 - 106034
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattaga 156  Q
    |||||||||||||||| || ||||||||||||||||||  || |||||||  |||| || || ||||  || |||| |||| |||||| || ||||||||    
T  106175 aacaaccaattacaacgtctaaacctaattcccaaatttccaaaactacagtctaccacctgttaaatccagtttccgaatcatacaacttagaattaga 106076  T
Q  157 gaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  106075 gaaagttagtcacacccttaccttagattgatcgacgaagga 106034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 6809 - 6678
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattaga 156  Q
    ||||||||||||||||||| |||||||||||| |||||  || ||||||||||||| || || ||||  || ||||||||| |||||| || ||||||||    
T  6809 aacaaccaattacaacttctaaacctaattcctaaatttccaaaactacaacctaccacctgttaaatccagtttcagaatcatacaacttagaattaga 6710  T
Q  157 gaaagttagtctcacccttaccttaaattgat 188  Q
    ||||||||||| |||||||||| || ||||||    
T  6709 gaaagttagtcccacccttaccatatattgat 6678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 5167 - 5310
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaact 125  Q
    |||| ||| |||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||        |||| | ||||||||| |||||    
T  5167 tacaaaaagtcaatggattttctattctattaacaaccaattacaacttcaaaacgtaattcccaaattc--------acaaacaacaacatgcaaaact 5258  T
Q  126 caatttcagaattatacaaatttgaattagagaaagttagtctcacccttac 177  Q
    |||||||||||||||||||  |   |||||||||||||| || |||||||||    
T  5259 caatttcagaattatacaacctaagattagagaaagttaatcccacccttac 5310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 11287 - 11430
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaact 125  Q
    |||| ||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||        |||| | ||||||||| |||||    
T  11287 tacaaaaagtcaatggattttctattctattaacaaccaattacaacttcaaaacctaattcccaaattc--------acaaacaacaacatgcaaaact 11378  T
Q  126 caatttcagaattatacaaatttgaattagagaaagttagtctcacccttac 177  Q
    |||||||||||| ||||||  |   |||||||||||||| || |||||||||    
T  11379 caatttcagaatgatacaacctaagattagagaaagttaatcccacccttac 11430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 19605 - 19718
Alignment:
Q  27 acacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactc 126  Q
    |||||||||||| |||||||||| | ||||||||| |||||||||||||| |||||||||| ||||||| || |   |||| | ||||||||||||||||    
T  19605 acacaaattcaatggattttctatt-tattaacaatcaattacaacttcataacctaattctcaaattcacaaattcacaaacaacaacatgctaaactc 19703  T
Q  127 aatttcagaattata 141  Q
    |||||||||||||||    
T  19704 aatttcagaattata 19718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 10913 - 10755
Alignment:
Q  21 aattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgct 120  Q
    |||||||||| |||||||  |||| |||||| |   ||||||||||||||||||| || |||||||||||||||| || ||||| |||||||||| || |    
T  10913 aattctacaccaattcaatagattctctactattacaacaaccaattacaacttctaaccctaattcccaaattccca-aacta-aacctacaacctgtt 10816  T
Q  121 aaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||  || ||||| ||| |||||| || ||||||||||||||||||| |||||||||||||    
T  10815 aaatccagtttcacaatcatacaacttagaattagagaaagttagtcccacccttacctta 10755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 5120 - 5045
Alignment:
Q  106 aacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||||| || ||||  || ||||| ||| |||||| || ||||||||||||||||||| |||||||||||||    
T  5120 aacctacaacttgttaaatccagtttcacaatcatacaacttagaattagagaaagttagtcccacccttacctta 5045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 1226 - 1058
Alignment:
Q  13 tggacatcaattctacacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctac 112  Q
    ||||||| | |||||||  |||||||| ||||| |||||||   | |||| |||||||||||| || ||||| ||||||||||||| |||| ||||||||    
T  1226 tggacattatttctacatcaattcaacagattt-ctactcttaaatcaactaattacaacttctaaccctaaatcccaaattctcaaaactccaacctac 1128  T
Q  113 aacatgctaaactcaa-tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||| || |||| |||| |||||||||||||  | || |||| |||||||||||||| |||||||||||||    
T  1127 aacttgttaaattcaattttcagaattataacacttagaataagagaaagttagtcccacccttacctta 1058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 186
Target Start/End: Complemental strand, 26779 - 26629
Alignment:
Q  30 caaattcaacggattttctactctattaacaacc-aattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa 128  Q
    ||||||||| |||||||||||||||||||||||| |||||| | |||||||||||||||||||||||        |||| | ||||||||||||||||||    
T  26779 caaattcaatggattttctactctattaacaaccaaattactaattcaaaacctaattcccaaattc--------acaaacaacaacatgctaaactcaa 26688  T
Q  129 -tttcagaattatacaaatttgaattagagaaagttagtctcacccttaccttaaattg 186  Q
     ||||||||||||||||  |  ||||| ||||||||| || ||||||||| ||| ||||    
T  26687 ttttcagaattatacaacctaaaattaaagaaagttaatcccacccttactttagattg 26629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 60843 - 60947
Alignment:
Q  78 aacctaattcccaaattctcataactacaacctacaacatgctaaactcaatt-tcagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    |||||||||| ||||| |||| ||||||||||||||||||| |||| |||||| |||||||||||||| || |||||| |||| |||||||||| |||||    
T  60843 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaattcaattctcagaattatacaacttagaattaaagaaggttagtctcatcctta 60942  T
Q  177 cctta 181  Q
    |||||    
T  60943 cctta 60947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 191
Target Start/End: Original strand, 8571 - 8704
Alignment:
Q  59 caaccaattacaacttcaaaacctaatt-cccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattaga 156  Q
    ||||||||||||||||| || ||||||| ||||||||| || |||||||||||||||| || |||| |||| ||||||||| |||| | || |||||||     
T  8571 caaccaattacaacttctaaccctaatttcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaatcatac-acttagaattagt 8669  T
Q  157 gaaagttagtctcacccttaccttaaattgatcga 191  Q
    ||| ||||||| ||||||||||||| |||||||||    
T  8670 gaaggttagtcccacccttaccttagattgatcga 8704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 138
Target Start/End: Original strand, 18744 - 18856
Alignment:
Q  26 tacacaaattcaacggattttctactctattaacaaccaattacaact-tcaaaacctaattcccaaattctcataactacaacctacaacatgctaaac 124  Q
    ||||||||||| | |||||||||| || ||||||||| |||| ||| | |||||||||||||||||| | |||| || | | | | |||||||| |||||    
T  18744 tacacaaattctatggattttctattcaattaacaactaattgcaattctcaaaacctaattcccaattcctca-aattcccaaccacaacatgttaaac 18842  T
Q  125 tcaatttcagaatt 138  Q
    ||||||||||||||    
T  18843 tcaatttcagaatt 18856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 16532 - 16650
Alignment:
Q  57 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattaga 156  Q
    ||||||||||||||||||| |||||||||| |||||||  || ||||||||||||| ||||| ||||  || ||||||||| |||||| || ||||||||    
T  16532 aacaaccaattacaacttctaaacctaattgccaaatttccaaaactacaacctaccacatgttaaatccagtttcagaatcatacaacttagaattaga 16631  T
Q  157 gaaagttagtctcaccctt 175  Q
     ||| |||||| |||||||    
T  16632 taaatttagtcccaccctt 16650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 64 - 182
Target Start/End: Original strand, 10741 - 10851
Alignment:
Q  64 aattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagtt 163  Q
    ||||||||||||||||||||||||||||||||        |||| | ||||||||||||||||||||||||||||||||||  |  ||||||||||||||    
T  10741 aattacaacttcaaaacctaattcccaaattc--------acaaacaacaacatgctaaactcaatttcagaattatacaacctaaaattagagaaagtt 10832  T
Q  164 agtctcacccttaccttaa 182  Q
    | || ||||||||| ||||    
T  10833 aatcccacccttacattaa 10851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 192
Target Start/End: Complemental strand, 135625 - 135493
Alignment:
Q  60 aaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattagaga 158  Q
    |||||||| ||||||| ||  ||||||||||||||| || |||||||||||||||| || |||| |||| |||||||||||||| | || ||||||| ||    
T  135625 aaccaatttcaacttctaactctaattcccaaattcccaaaactacaacctacaacctgttaaattcaattttcagaattatac-acttagaattagtga 135527  T
Q  159 aagttagtctcacccttaccttaaattgatcgac 192  Q
    | ||||||| |||||||||||||  |||||||||    
T  135526 aggttagtcccacccttaccttaggttgatcgac 135493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 189
Target Start/End: Original strand, 67060 - 67181
Alignment:
Q  69 caacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtc 167  Q
    ||||||| |||||| ||||||||||||  | |||||||||||||||  || ||||  |||||| ||||||||||| | || |||||||||||||||||||    
T  67060 caacttctaaaccttattcccaaattcctaaaactacaacctacaatttgttaaatccaattttcagaattataccacttcgaattagagaaagttagtc 67159  T
Q  168 tcacccttaccttaaattgatc 189  Q
     |||| |||||||| |||||||    
T  67160 ccacctttaccttagattgatc 67181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 191
Target Start/End: Complemental strand, 3174 - 3042
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattagag 157  Q
    ||||||||||||||||| || ||||||||| |||||| || |||||||||||||||| || |||| |||| ||||||||| |||| | || ||||||  |    
T  3174 caaccaattacaacttctaaccctaattcctaaattcccaaaactacaacctacaacttgttaaattcaattttcagaataatac-acttagaattattg 3076  T
Q  158 aaagttagtctcacccttaccttaaattgatcga 191  Q
    || ||||||| ||||||||||||  |||||||||    
T  3075 aaggttagtcccacccttaccttggattgatcga 3042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 126407 - 126305
Alignment:
Q  78 aacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttac 177  Q
    |||||||||| ||||| |||| |||||||| ||||||| || ||||  |||||||||||| |||||| || ||||||||||||||||||| || ||||||    
T  126407 aacctaattctcaaatcctcaaaactacaatctacaacttgttaaatccaatttcagaatcatacaacttagaattagagaaagttagtccca-ccttac 126309  T
Q  178 ctta 181  Q
    ||||    
T  126308 ctta 126305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 94
Target Start/End: Complemental strand, 6686 - 6620
Alignment:
Q  28 cacaaattcaacggattttctactctattaacaaccaattacaacttcaaaacctaattcccaaatt 94  Q
    ||||||||||  |||| ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  6686 cacaaattcattggatcttctactctattaacaaccaattacgacatcaaaacctaattcccaaatt 6620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 2143 - 2071
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt 131  Q
    ||||||||||||||||  ||||||||||||||||||  || ||||||||||||||||||| |||| |||||||    
T  2143 caaccaattacaacttataaacctaattcccaaatttccaaaactacaacctacaacatgttaaattcaattt 2071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 191
Target Start/End: Complemental strand, 20202 - 20076
Alignment:
Q  64 aattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaa-tttcagaattatacaaatttgaattagagaaagt 162  Q
    |||||||||||| |||| |||||||||||||| || ||||| |||||||||| || |||| |||| |||||||||||||| | || ||||||| ||| ||    
T  20202 aattacaacttctaaacataattcccaaattccca-aactataacctacaacctgttaaattcaattttcagaattatac-acttagaattagtgaaggt 20105  T
Q  163 tagtctcacccttaccttaaattgatcga 191  Q
    ||||| | |||||||||||  ||||||||    
T  20104 tagtcccgcccttaccttaggttgatcga 20076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 181
Target Start/End: Original strand, 7205 - 7329
Alignment:
Q  59 caaccaattacaacttcaaaacctaattc-ccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattaga 156  Q
    ||||||||||||||||| || |||||||  |||||||| || ||||| |||||||||||||  |||  |||||| ||||||||||||| || |||||| |    
T  7205 caaccaattacaacttctaaccctaattttccaaattcccaaaactataacctacaacatgtcaaatccaattttcagaattatacaacttagaattaaa 7304  T
Q  157 gaaagttagtctcacccttacctta 181  Q
    ||| ||||||| |||||| ||||||    
T  7305 gaatgttagtcccaccctcacctta 7329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 61900 - 61848
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  61900 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 61848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 198
Target Start/End: Original strand, 30607 - 30723
Alignment:
Q  82 taattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcacccttacctt 180  Q
    ||||| ||||||||||| ||||| ||||||||||||| ||||  |||||| |||||||| |  | || ||||||  ||| ||||||||||||||||||||    
T  30607 taatttccaaattctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggttagtctcacccttacctt 30705  T
Q  181 aaattgatcgacgaagga 198  Q
      ||||||||||||||||    
T  30706 ggattgatcgacgaagga 30723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 4888 - 4992
Alignment:
Q  78 aacctaattcccaaattctcataactacaacctacaacatgctaaactcaatt-tcagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    ||||||||||  |||| |||| ||||||| ||||||||||| ||||  ||| | |||||||||||||| || |||||| |||| ||||||| ||||||||    
T  4888 aacctaattcttaaatcctcaaaactacatcctacaacatgttaaatccaactctcagaattatacaacttagaattaaagaaggttagtcccaccctta 4987  T
Q  177 cctta 181  Q
    |||||    
T  4988 cctta 4992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 4333 - 4437
Alignment:
Q  78 aacctaattcccaaattctcataactacaacctacaacatgctaaactcaatt-tcagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    |||||||||| ||||| |||| ||||||||||||||||||| ||||  || || |||||||||||||| || |||||| |||| ||||||| || | |||    
T  4333 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaatccagttctcagaattatacaacttagaattaaagaaggttagtcccatcgtta 4432  T
Q  177 cctta 181  Q
    |||||    
T  4433 cctta 4437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 12323 - 12403
Alignment:
Q  58 acaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaa-catgctaaactcaatttcagaat 137  Q
    |||||| ||||||||||| ||||||||||| ||||||  || ||||||||||||||| |||| |||| |||||||||||||    
T  12323 acaacctattacaacttctaaacctaattctcaaatttccaaaactacaacctacaaccatgttaaattcaatttcagaat 12403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 17992 - 17940
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||||||||||| || ||||||||||||||||||| |||||||||||||    
T  17992 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 186
Target Start/End: Original strand, 96347 - 96455
Alignment:
Q  78 aacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcacccttac 177  Q
    |||||||||| | ||| |||| |||||||||||||||| || ||||  || ||||||||| |||||| |  ||||||||||||||||||| |||| ||||    
T  96347 aacctaattctccaatcctcaaaactacaacctacaacttgttaaatccattttcagaatcatacaactcagaattagagaaagttagtcccacctttac 96446  T
Q  178 cttaaattg 186  Q
     ||| ||||    
T  96447 tttagattg 96455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 181
Target Start/End: Original strand, 398510 - 398614
Alignment:
Q  78 aacctaattcccaaattctcataactacaacctacaacatgctaaactcaatt-tcagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    ||||||||||  |||| |||| ||||||| ||||||||||| ||||  ||||| ||||||||||||||  | |||||| |||| ||||||| ||||||||    
T  398510 aacctaattcttaaatcctcaaaactacatcctacaacatgttaaatccaattctcagaattatacaacctagaattaaagaaggttagtcccaccctta 398609  T
Q  177 cctta 181  Q
    |||||    
T  398610 cctta 398614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 2042 - 2089
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  2042 attagagaaagctagtctcacccttaccttagattgatcgacgaagga 2089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 186226 - 186179
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  186226 attagagaaagctagtctcacccttaccttagattgatcgacgaagga 186179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 1917 - 1855
Alignment:
Q  111 acaacatgctaaactcaatttcagaattatacaaatttgaattagagaaagttagtctcaccc 173  Q
    |||||||| |||| |||||||||||||||||| | || ||||||||||||||||||| |||||    
T  1917 acaacatgttaaattcaatttcagaattataccacttagaattagagaaagttagtcccaccc 1855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 19924 - 20006
Alignment:
Q  100 aactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||||||||||| || ||||  |||||| ||||||||||  | || ||||||||||||||||||| |||||||||||||    
T  19924 aactacaacctacaacttgttaaatccaattttcagaattataacacttagaattagagaaagttagtcccacccttacctta 20006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 13878 - 13911
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaa 92  Q
    ||||||||||||||||| ||||||||||||||||    
T  13878 caaccaattacaacttctaaacctaattcccaaa 13911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 5761 - 5712
Alignment:
Q  127 aatttcagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    |||||||||||||||||| || ||||||||||||||||||| ||||||||    
T  5761 aatttcagaattatacaacttagaattagagaaagttagtcccaccctta 5712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 2252 - 2200
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||||||||||| || |||||||||||| |||||| |||||||||||||    
T  2252 tttcagaattatacaacttagaattagagaaaattagtcccacccttacctta 2200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 143
Target Start/End: Original strand, 4612 - 4696
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaattataca 143  Q
    |||| |||||||||||| ||||||||||| ||||||| || ||| |||||||| ||| || |||| ||||||| ||||| |||||    
T  4612 caactaattacaacttctaaacctaattctcaaattcccaaaaccacaacctaaaacctgttaaattcaattttagaatcataca 4696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 19207 - 19255
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttac 177  Q
    |||||||||||||||| || ||||||||||||||||||| |||||||||    
T  19207 tttcagaattatacaacttagaattagagaaagttagtcccacccttac 19255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 15272 - 15324
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||| |||||| || ||||||||||||||||||| |||||||||||||    
T  15272 tttcagaataatacaacttagaattagagaaagttagtcccacccttacctta 15324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 52648 - 52544
Alignment:
Q  78 aacctaattcccaaattctcataactacaacctacaacatgctaaactcaatt-tcagaattatacaaatttgaattagagaaagttagtctcaccctta 176  Q
    |||||||||| ||||| |||| ||||||| ||||||||||| ||||  ||||| ||||||||| |||| || ||||||  ||| ||||||| ||||||||    
T  52648 aacctaattctcaaatcctcaaaactacatcctacaacatgttaaatccaattctcagaattacacaacttagaattaatgaaggttagtcccaccctta 52549  T
Q  177 cctta 181  Q
     ||||    
T  52548 tctta 52544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 40129 - 40176
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    ||||||||||||||||| || |||||||||| ||||||||||||||||    
T  40129 attagagaaagttagtcgcatccttaccttagattgatcgacgaagga 40176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 5311 - 5418
Alignment:
Q  73 ttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcac 171  Q
    |||||| |||||||||| ||||| || |||||||| ||||| |||| |||| ||||||| |||||| |||||  || ||||||| ||| ||||||| |||    
T  5311 ttcaaaccctaattcccgaattcacaaaactacaatctaca-catgttaaattcaattttcagaatcatacac-ttagaattagtgaaggttagtcccac 5408  T
Q  172 ccttacctta 181  Q
    ||||||||||    
T  5409 ccttacctta 5418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 158949 - 158888
Alignment:
Q  54 attaacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||| |||||| || ||||||| || |||||||||||||||| || ||||||||||||||||    
T  158949 attatcaaccatttgcaacttctaaccctaattcccaaattcccaaaactacaacctacaac 158888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 5353 - 5305
Alignment:
Q  133 agaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||||||| ||  |||||||||||||||||| |||||||||||||    
T  5353 agaattatacaacttaaaattagagaaagttagtcccacccttacctta 5305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 9085 - 9132
Alignment:
Q  151 attagagaaagttagtctcacccttaccttaaattgatcgacgaagga 198  Q
    |||| |||| ||||||| ||||||||||||| ||||||||||||||||    
T  9085 attaaagaaggttagtcccacccttaccttagattgatcgacgaagga 9132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 448 - 510
Alignment:
Q  80 cctaattcccaaattc-tcataactacaacctacaacatgctaaactcaatttcagaattata 141  Q
    ||||||||||||| || ||| ||||| ||||||||||||| ||||  ||||||||||||||||    
T  448 cctaattcccaaaatcctcaaaactataacctacaacatgttaaatccaatttcagaattata 510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 139
Target Start/End: Original strand, 9004 - 9070
Alignment:
Q  73 ttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaatttcagaatta 139  Q
    |||||| ||||||||||||||||  | |||||||||||||||| || ||||  || |||||||||||    
T  9004 ttcaaaccctaattcccaaattccaaaaactacaacctacaacctgttaaatccagtttcagaatta 9070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 182
Target Start/End: Complemental strand, 228 - 195
Alignment:
Q  149 gaattagagaaagttagtctcacccttaccttaa 182  Q
    ||||||||||||||||||| ||||||||||||||    
T  228 gaattagagaaagttagtcccacccttaccttaa 195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 18764 - 18731
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaa 92  Q
    ||||||||||||||||| ||||||||||||||||    
T  18764 caaccaattacaacttctaaacctaattcccaaa 18731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 196
Target Start/End: Original strand, 120905 - 121021
Alignment:
Q  80 cctaattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcacccttacc 178  Q
    |||||||| ||||| |||| ||||| ||||||||||||| ||||  |||||| |||||||| |  | || ||||||  ||| | ||||| ||||||||||    
T  120905 cctaattcacaaatcctcaaaacta-aacctacaacatgttaaatacaattttcagaattaaaacacttagaattattgaaggctagtcccacccttacc 121003  T
Q  179 ttaaattgatcgacgaag 196  Q
    ||  ||||||||||||||    
T  121004 ttggattgatcgacgaag 121021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 613 - 568
Alignment:
Q  78 aacctaattcccaaattctcataactacaacctacaacatgctaaa 123  Q
    |||||||||| ||||| |||| ||||||||||||||||||| ||||    
T  613 aacctaattctcaaatcctcaaaactacaacctacaacatgttaaa 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 5913 - 5861
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    |||||||||||||  | || |||||||||||||||||| ||||| ||||||||    
T  5913 tttcagaattataacacttagaattagagaaagttagtatcacctttacctta 5861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 5029 - 5081
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||| |  | || ||||||||||||||||||| |||||||||||||    
T  5029 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 11223 - 11275
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||| |  | || ||||||||||||||||| |||||||||||||||    
T  11223 tttcagaattaaaatacttggaattagagaaagttagactcacccttacctta 11275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 8960 - 9012
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||| |  | || ||||||||||||||||||| |||||||||||||    
T  8960 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 9012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 13370 - 13442
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt 131  Q
    |||||| || ||||||  || |||||||||||||||| || |||| ||||||||||| || |||| |||||||    
T  13370 caaccatttgcaacttttaaccctaattcccaaattcccaaaacttcaacctacaacttgttaaattcaattt 13442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 5029 - 5081
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||| |  | || ||||||||||||||||||| |||||||||||||    
T  5029 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 28451 - 28395
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac 115  Q
    |||||| || ||||||| || ||||||| |||||||| || ||||||||||||||||    
T  28451 caaccatttgcaacttctaaccctaatttccaaattcccaaaactacaacctacaac 28395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 21097 - 21149
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||| |  | || ||||||||||||||||||| |||||||||||||    
T  21097 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 21149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 34112 - 34164
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||| |  | || ||||||||||||||||||| |||||||||||||    
T  34112 tttcagaattaaaatacttagaattagagaaagttagtcccacccttacctta 34164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 131
Target Start/End: Complemental strand, 35586 - 35514
Alignment:
Q  59 caaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaacatgctaaactcaattt 131  Q
    |||||| || ||||||| || | |||||||||||||| || |||||||||||||||  || |||| |||||||    
T  35586 caaccatttgcaacttctaaccttaattcccaaattcccaaaactacaacctacaagttgttaaattcaattt 35514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 69905 - 69853
Alignment:
Q  129 tttcagaattatacaaatttgaattagagaaagttagtctcacccttacctta 181  Q
    ||||||||||| |  | || ||||||||||||||||||| |||||||||||||    
T  69905 tttcagaattaaattacttagaattagagaaagttagtcccacccttacctta 69853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 181
Target Start/End: Original strand, 29340 - 29440
Alignment:
Q  82 taattcccaaattctcataactacaacctacaacatgctaaactcaattt-cagaattatacaaatttgaattagagaaagttagtctcacccttacctt 180  Q
    |||||| ||||| | || |||||||||||||||| || ||||  || ||| |||||| |||||| || |||||| ||||  |||||| ||||||||||||    
T  29340 taattctcaaatccccaaaactacaacctacaacttgttaaatccacttttcagaatcatacaacttagaattaaagaagattagtcccacccttacctt 29439  T
Q  181 a 181  Q
    |    
T  29440 a 29440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University