View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12579_low_55 (Length: 238)

Name: NF12579_low_55
Description: NF12579
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12579_low_55
NF12579_low_55
[»] chr4 (50 HSPs)
chr4 (1-67)||(42332863-42332929)
chr4 (1-67)||(43142675-43142741)
chr4 (1-67)||(3291987-3292053)
chr4 (1-67)||(6689327-6689393)
chr4 (1-67)||(7769567-7769633)
chr4 (1-67)||(30215836-30215902)
chr4 (1-67)||(35546962-35547028)
chr4 (113-179)||(35547080-35547146)
chr4 (113-179)||(43142563-43142629)
chr4 (1-67)||(28876404-28876470)
chr4 (1-67)||(30076741-30076807)
chr4 (1-67)||(33135534-33135600)
chr4 (1-67)||(50204177-50204243)
chr4 (113-174)||(7769682-7769743)
chr4 (1-67)||(10351986-10352052)
chr4 (1-67)||(13390537-13390603)
chr4 (1-67)||(13398650-13398716)
chr4 (1-67)||(44157635-44157701)
chr4 (118-179)||(6689216-6689277)
chr4 (1-67)||(1818667-1818732)
chr4 (5-67)||(36381439-36381501)
chr4 (113-179)||(42332753-42332819)
chr4 (1-66)||(26449704-26449769)
chr4 (7-67)||(29319443-29319503)
chr4 (5-67)||(17510329-17510391)
chr4 (1-67)||(37577761-37577827)
chr4 (5-67)||(40530100-40530162)
chr4 (1-63)||(48990282-48990344)
chr4 (119-163)||(3291886-3291930)
chr4 (5-67)||(25931769-25931831)
chr4 (133-174)||(10351875-10351916)
chr4 (5-64)||(13013204-13013263)
chr4 (5-64)||(47501789-47501848)
chr4 (126-180)||(1818824-1818878)
chr4 (10-64)||(20130249-20130303)
chr4 (137-179)||(29319321-29319363)
chr4 (1-55)||(30110972-30111026)
chr4 (1-38)||(29995121-29995158)
chr4 (125-174)||(48131131-48131180)
chr4 (5-64)||(26438371-26438430)
chr4 (137-180)||(34406244-34406287)
chr4 (5-64)||(34406376-34406435)
chr4 (5-64)||(43356920-43356979)
chr4 (137-180)||(47501937-47501980)
chr4 (137-179)||(13013353-13013395)
chr4 (137-179)||(20130403-20130445)
chr4 (117-166)||(30215729-30215781)
chr4 (137-179)||(43357069-43357111)
chr4 (1-55)||(48131023-48131076)
chr4 (126-174)||(44157784-44157831)
[»] chr8 (30 HSPs)
chr8 (1-67)||(16787115-16787181)
chr8 (1-66)||(23403079-23403144)
chr8 (1-64)||(34135898-34135961)
chr8 (113-179)||(16787000-16787066)
chr8 (1-67)||(4405019-4405085)
chr8 (113-179)||(34135783-34135849)
chr8 (5-67)||(15839292-15839354)
chr8 (1-66)||(42231917-42231982)
chr8 (5-67)||(3647881-3647943)
chr8 (1-67)||(36409496-36409561)
chr8 (5-64)||(29727477-29727536)
chr8 (1-55)||(40469969-40470023)
chr8 (4-55)||(3436248-3436299)
chr8 (113-172)||(4405135-4405194)
chr8 (8-63)||(7279044-7279099)
chr8 (5-64)||(24019483-24019542)
chr8 (5-64)||(28524214-28524273)
chr8 (5-64)||(39915530-39915589)
chr8 (126-179)||(27046966-27047019)
chr8 (137-174)||(29727350-29727387)
chr8 (126-179)||(36409650-36409703)
chr8 (19-67)||(27046841-27046889)
chr8 (137-181)||(28524359-28524403)
chr8 (137-180)||(24019354-24019397)
chr8 (126-180)||(23403222-23403276)
chr8 (16-62)||(29632413-29632459)
chr8 (137-179)||(29632549-29632591)
chr8 (137-179)||(39915675-39915717)
chr8 (1-46)||(2727961-2728006)
chr8 (133-173)||(40469866-40469906)
[»] chr5 (36 HSPs)
chr5 (1-67)||(17331086-17331152)
chr5 (1-67)||(12277945-12278011)
chr5 (113-179)||(17330970-17331036)
chr5 (1-67)||(37255643-37255709)
chr5 (1-67)||(31681377-31681443)
chr5 (1-67)||(33431331-33431397)
chr5 (113-174)||(12277835-12277896)
chr5 (126-174)||(36292524-36292572)
chr5 (5-67)||(10036922-10036984)
chr5 (5-67)||(16155906-16155968)
chr5 (5-67)||(19986459-19986521)
chr5 (113-179)||(33431449-33431515)
chr5 (1-67)||(43069857-43069923)
chr5 (113-174)||(31681495-31681556)
chr5 (7-67)||(13818994-13819054)
chr5 (5-67)||(16332990-16333052)
chr5 (5-67)||(39435715-39435777)
chr5 (5-67)||(39656617-39656679)
chr5 (180-222)||(42888549-42888591)
chr5 (113-174)||(37255758-37255819)
chr5 (5-67)||(36292371-36292433)
chr5 (5-67)||(36292710-36292772)
chr5 (133-174)||(43070018-43070059)
chr5 (137-180)||(19986618-19986661)
chr5 (5-64)||(26282410-26282469)
chr5 (1-66)||(31500811-31500873)
chr5 (5-67)||(1775468-1775530)
chr5 (137-180)||(26282280-26282323)
chr5 (8-55)||(28801893-28801940)
chr5 (126-173)||(31500681-31500728)
chr5 (126-172)||(28801996-28802042)
chr5 (137-179)||(36292573-36292615)
chr5 (137-179)||(39435873-39435915)
chr5 (137-174)||(10037073-10037110)
chr5 (137-174)||(16332873-16332910)
chr5 (128-180)||(33007062-33007114)
[»] chr3 (23 HSPs)
chr3 (1-67)||(11017360-11017426)
chr3 (1-67)||(45183991-45184057)
chr3 (1-67)||(6929984-6930050)
chr3 (113-179)||(11017248-11017314)
chr3 (113-179)||(6929867-6929933)
chr3 (5-67)||(34083211-34083273)
chr3 (1-55)||(45336869-45336923)
chr3 (1-66)||(35515007-35515072)
chr3 (5-66)||(40080832-40080893)
chr3 (8-55)||(5136311-5136358)
chr3 (5-64)||(6268514-6268573)
chr3 (5-64)||(22967536-22967595)
chr3 (1-55)||(1185611-1185665)
chr3 (5-67)||(19391162-19391223)
chr3 (1-63)||(19564610-19564672)
chr3 (16-66)||(27936177-27936227)
chr3 (113-167)||(45184106-45184160)
chr3 (133-180)||(1185500-1185547)
chr3 (5-64)||(39772806-39772865)
chr3 (137-179)||(22967395-22967437)
chr3 (126-172)||(27936300-27936346)
chr3 (133-174)||(19564480-19564521)
chr3 (1-38)||(33041961-33041998)
[»] chr7 (27 HSPs)
chr7 (1-67)||(26625755-26625821)
chr7 (1-67)||(38637472-38637538)
chr7 (1-67)||(43183559-43183625)
chr7 (7-67)||(37001329-37001389)
chr7 (113-180)||(37001213-37001280)
chr7 (5-67)||(8866821-8866883)
chr7 (1-67)||(7003637-7003703)
chr7 (1-67)||(7049508-7049574)
chr7 (113-179)||(8866706-8866772)
chr7 (5-66)||(5556477-5556538)
chr7 (7-67)||(3113212-3113272)
chr7 (19-67)||(36659189-36659237)
chr7 (8-67)||(34468424-34468483)
chr7 (5-67)||(8395139-8395201)
chr7 (5-67)||(36631831-36631893)
chr7 (113-174)||(38637360-38637421)
chr7 (113-179)||(43183441-43183507)
chr7 (4-52)||(11019694-11019742)
chr7 (117-179)||(26625876-26625941)
chr7 (11-66)||(33686553-33686608)
chr7 (10-64)||(14775688-14775742)
chr7 (10-64)||(15226141-15226195)
chr7 (126-174)||(34468332-34468380)
chr7 (137-180)||(36631988-36632031)
chr7 (137-179)||(3113089-3113131)
chr7 (137-179)||(14775547-14775589)
chr7 (137-179)||(15226000-15226042)
[»] chr2 (25 HSPs)
chr2 (1-67)||(45419593-45419659)
chr2 (113-180)||(12755830-12755897)
chr2 (1-67)||(42442996-42443062)
chr2 (1-67)||(771745-771811)
chr2 (1-67)||(8058433-8058499)
chr2 (1-67)||(16406140-16406206)
chr2 (113-179)||(45419711-45419777)
chr2 (1-66)||(26161824-26161889)
chr2 (5-67)||(2286915-2286977)
chr2 (5-67)||(17444125-17444187)
chr2 (1-52)||(26238626-26238677)
chr2 (5-67)||(18982559-18982621)
chr2 (5-67)||(31580826-31580888)
chr2 (1-66)||(4554394-4554459)
chr2 (126-179)||(26161698-26161751)
chr2 (5-64)||(6402896-6402955)
chr2 (8-63)||(32126282-32126337)
chr2 (133-171)||(17090231-17090269)
chr2 (126-174)||(772287-772335)
chr2 (5-64)||(41250725-41250784)
chr2 (137-179)||(6402768-6402810)
chr2 (29-67)||(12755946-12755984)
chr2 (133-179)||(44084132-44084178)
chr2 (133-174)||(4554300-4554341)
chr2 (128-180)||(29257543-29257595)
[»] chr6 (11 HSPs)
chr6 (1-67)||(28997740-28997806)
chr6 (1-64)||(33228444-33228507)
chr6 (113-179)||(28997857-28997923)
chr6 (1-67)||(29744281-29744347)
chr6 (5-67)||(34947916-34947978)
chr6 (134-180)||(29744433-29744479)
chr6 (5-64)||(399633-399692)
chr6 (5-63)||(13838814-13838872)
chr6 (1-55)||(31028056-31028110)
chr6 (137-174)||(34947798-34947835)
chr6 (10-47)||(34253150-34253187)
[»] chr1 (18 HSPs)
chr1 (1-67)||(11957448-11957514)
chr1 (1-67)||(35908567-35908633)
chr1 (113-180)||(35908682-35908749)
chr1 (1-67)||(17446304-17446370)
chr1 (1-67)||(15209378-15209444)
chr1 (5-67)||(23314009-23314071)
chr1 (6-67)||(32981148-32981209)
chr1 (1-66)||(3829963-3830028)
chr1 (7-67)||(7434439-7434499)
chr1 (5-64)||(42310031-42310090)
chr1 (1-51)||(33490391-33490441)
chr1 (137-179)||(7434579-7434621)
chr1 (126-174)||(3830100-3830148)
chr1 (126-174)||(41971253-41971301)
chr1 (4-55)||(41971357-41971408)
chr1 (126-180)||(320667-320721)
chr1 (137-179)||(26159381-26159423)
chr1 (125-181)||(11957302-11957358)
[»] scaffold0154 (2 HSPs)
scaffold0154 (1-66)||(32226-32291)
scaffold0154 (126-179)||(32336-32388)
[»] scaffold0069 (1 HSPs)
scaffold0069 (5-67)||(18574-18636)
[»] scaffold0002 (2 HSPs)
scaffold0002 (5-64)||(479549-479608)
scaffold0002 (137-179)||(479418-479460)
[»] scaffold0178 (2 HSPs)
scaffold0178 (126-174)||(21949-21997)
scaffold0178 (126-174)||(27451-27499)
[»] scaffold0618 (1 HSPs)
scaffold0618 (128-180)||(1872-1924)


Alignment Details
Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 42332929 - 42332863
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42332929 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 42332863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 43142741 - 43142675
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43142741 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 43142675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3292053 - 3291987
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  3292053 tacatggtcaattttaattaataatcctattttaaattgtagttttattgacaaaatgataaacctc 3291987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 6689393 - 6689327
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  6689393 tacatggtcaattttaattaataatcctattttaaattgtagttttattgacaaaatgataaacctc 6689327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 7769567 - 7769633
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  7769567 tacatggtcaattttaattaataattctattttaaattgtacttttattgacaaaatgataaacctc 7769633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 30215902 - 30215836
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  30215902 tacatggtcaattttaattaataatcctatttgaaattgtacttttattgacaaaatgataaacctc 30215836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 35546962 - 35547028
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  35546962 tacatggtcaattttaattaataatcctattttaaattgtagttttattgacaaaatgataaacctc 35547028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 35547080 - 35547146
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35547080 tgaccgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgccactg 35547146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 43142629 - 43142563
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  43142629 tgactgttgatataatttgggataaatttttcgcccgggctccataaatttcctggctccgccactg 43142563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28876470 - 28876404
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  28876470 tacatggtcaatttcaattaataatcctattttaaattgtacttttgttgacaaaatgataaacctc 28876404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 30076807 - 30076741
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  30076807 tacatggtcaatttcaattaataatcctattttaaattgtacttttgttgacaaaatgataaacctc 30076741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33135600 - 33135534
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  33135600 tacatggtcaatttcaattaataatcctattttaaattgtacttttgttgacaaaatgataaacctc 33135534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 50204243 - 50204177
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  50204243 tacatggtcaatttcaattaataatcctattttaaattgtacttttgttgacaaaatgataaacctc 50204177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 7769682 - 7769743
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgc 174  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  7769682 tgactgttgatataatttaggataaatttttcgcccgggctccataaatttcctggctccgc 7769743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10352052 - 10351986
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  10352052 tacatggtcaatttcaattaataaccctattttaaattgtacttttgttgacaaaatgataaacctc 10351986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13390603 - 13390537
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||||    
T  13390603 tacatggtcaatttcaattaataatcctattttaaattgtacttttgttgataaaatgataaacctc 13390537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13398716 - 13398650
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||| |||| |||||||||||||||||||||||||| |||||||| |||||||||||    
T  13398716 tacatggtcaatttcaattgataatcctattttaaattgtacttttgttgacaaaatgataaacctc 13398650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 44157635 - 44157701
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  44157635 tacatgatcaatttcaattaataatcctattttaaattgtacttttgttgacaaaatgataaacctc 44157701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 6689277 - 6689216
Alignment:
Q  118 gttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  6689277 gttgatataatttaggataaatttttcgcccgggctccataaatttcctggctccgccactg 6689216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 1818667 - 1818732
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  1818667 tacatggtcaatttcaattaataa-cctattttaaattgtacttttgttgacaaaatgataaacctc 1818732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 36381501 - 36381439
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||||||||| |||||||||||||| |||||| |||||||| |||||||||||    
T  36381501 tggtcaattttaattaataaccctattttaaattgcacttttgttgacaaaatgataaacctc 36381439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 42332819 - 42332753
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||||||||||||||||||||| ||| ||| ||| ||||||||||||||||||| ||||    
T  42332819 tgactgttgatataatttgggataaattttccgctcgggctctataaatttcctggctccgccactg 42332753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26449704 - 26449769
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacct 66  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||| |||||||| ||||||||||    
T  26449704 tacagggtcaatttcaattaataatcctattttacattgtacttttgttgacaaaatgataaacct 26449769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 29319503 - 29319443
Alignment:
Q  7 gtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  29319503 gtcaatttcaattaataaccctattttaaattgtacttttgttgacaaaatgataaacctc 29319443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 17510391 - 17510329
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||| | ||||||||||||||||||| |||||||| |||||||||||    
T  17510391 tggtcaatttcaattaataaccttattttaaattgtacttttgttgacaaaatgataaacctc 17510329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 37577761 - 37577827
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||| ||||||| |||||||||||||| ||||||||||| |||| |||||||| |||||||||||    
T  37577761 tacatgatcaatttcaattaataatcctaatttaaattgtatttttgttgacaaaatgataaacctc 37577827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 40530100 - 40530162
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||| |||||||||||||| |||||| |||||||| |||||||||||    
T  40530100 tggtcaatttcaattaataaccctattttaaattgcacttttgttgacaaaatgataaacctc 40530162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 48990282 - 48990344
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaa 63  Q
    |||| ||||||||| |||||||||  ||||||||||||||||||||||||||||| |||||||    
T  48990282 tacagggtcaatttcaattaataactctattttaaattgtacttttattgacaaaatgataaa 48990344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 3291930 - 3291886
Alignment:
Q  119 ttgatataatttgggataaatttttcgcccggactccataaattt 163  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  3291930 ttgatataatttgggataaatttttcgcccgggctccataaattt 3291886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 25931769 - 25931831
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||| |||||||||||||| |||||| || ||||| |||||||||||    
T  25931769 tggtcaatttcaattaataaccctattttaaattgcacttttgttaacaaaatgataaacctc 25931831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 10351916 - 10351875
Alignment:
Q  133 gataaatttttcgcccggactccataaatttcctggctccgc 174  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  10351916 gataaatttttcgcccgggctccataaatttcctggctccgc 10351875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 13013204 - 13013263
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    |||| ||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||    
T  13013204 tggttaatttaaattaataaccctattttaaattgtacttttgttgataaaatgataaac 13013263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 47501789 - 47501848
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    |||| ||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||    
T  47501789 tggttaatttaaattaataaccctattttaaattgtacttttgttgataaaatgataaac 47501848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 1818824 - 1818878
Alignment:
Q  126 aatttgggataaatttttcgcccggactccataaatttcctggctccgcgactga 180  Q
    |||||| |||||||||||||||||  ||| ||||||||||||||||||| |||||    
T  1818824 aatttgtgataaatttttcgcccgtgctctataaatttcctggctccgccactga 1818878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 20130249 - 20130303
Alignment:
Q  10 aattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    ||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||    
T  20130249 aatttaaattaataaccctattttaaattgtacttttgttgataaaatgataaac 20130303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 29319363 - 29319321
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  29319363 aatttttcgcccgggctccataaatttcctggctccgcaactg 29319321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30110972 - 30111026
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaa 55  Q
    |||||||||||||| ||| ||||| | ||||||||||||||||||| ||||||||    
T  30110972 tacatggtcaatttcaatcaataaccatattttaaattgtacttttgttgacaaa 30111026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 29995158 - 29995121
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaatt 38  Q
    |||||||||||||| |||||||||||||||||||||||    
T  29995158 tacatggtcaatttcaattaataatcctattttaaatt 29995121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 48131131 - 48131180
Alignment:
Q  125 taatttgggataaatttttcgcccggactccataaatttcctggctccgc 174  Q
    ||||||| ||||| ||||| |||| |||||||||||||||||||||||||    
T  48131131 taatttgcgataatttttttgcccagactccataaatttcctggctccgc 48131180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 26438430 - 26438371
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    |||| ||||| ||||||||| ||||||||||||||| ||||| |||| ||| ||||||||    
T  26438430 tggttaatttaaattaataaccctattttaaattgtccttttgttgataaaatgataaac 26438371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 34406287 - 34406244
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactga 180  Q
    |||||||||||| | ||||||||||||||||||||||| |||||    
T  34406287 aatttttcgcccaggctccataaatttcctggctccgccactga 34406244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 34406435 - 34406376
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    |||| ||||| ||||||||| ||||||||||||||| ||||| |||| ||| ||||||||    
T  34406435 tggttaatttaaattaataaccctattttaaattgtccttttgttgataaaatgataaac 34406376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 43356920 - 43356979
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    |||| ||||| ||||||||| ||||||||||||||| ||||| |||| ||| ||||||||    
T  43356920 tggttaatttaaattaataaccctattttaaattgtccttttgttgataaaatgataaac 43356979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 47501937 - 47501980
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactga 180  Q
    |||||||||||| | ||||||||||||||||||||||| |||||    
T  47501937 aatttttcgcccaggctccataaatttcctggctccgccactga 47501980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 13013353 - 13013395
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||| | ||||||||||||||||||||||| ||||    
T  13013353 aatttttcgcccaggctccataaatttcctggctccgccactg 13013395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 20130403 - 20130445
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||| | ||||||||||||||||||||||| ||||    
T  20130403 aatttttcgcccaggctccataaatttcctggctccgccactg 20130445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 30215781 - 30215729
Alignment:
Q  117 tgttgatataatttgggataaattttt---cgcccggactccataaatttcct 166  Q
    ||||||||||||||| |||||||||||   ||||||| |||||||||||||||    
T  30215781 tgttgatataatttgagataaatttttcgccgcccgggctccataaatttcct 30215729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 43357069 - 43357111
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||| | ||||||||||||||||||||||| ||||    
T  43357069 aatttttcgcccaggctccataaatttcctggctccgccactg 43357111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 48131023 - 48131076
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaa 55  Q
    |||||||||||||| ||||||||| |||| |||||| ||||||||| ||||||||    
T  48131023 tacatggtcaatttcaattaataacccta-tttaaaatgtacttttgttgacaaa 48131076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 44157784 - 44157831
Alignment:
Q  126 aatttgggataaatttttcgcccggactccataaatttcctggctccgc 174  Q
    |||||| ||||||||||| |||||| |||||||||||||||| ||||||    
T  44157784 aatttgcgataaattttttgcccgg-ctccataaatttcctgactccgc 44157831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16787181 - 16787115
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16787181 tacatggtcaattttaattaataagcctattttaaattgtacttttattgacaaattgataaacctc 16787115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23403079 - 23403144
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacct 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23403079 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaaatgataaacct 23403144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34135961 - 34135898
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34135961 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaaatgataaac 34135898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 16787066 - 16787000
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  16787066 tgactgttgatataatttgggataaatttttcgcccgggctccataaatttcctggctccgccactg 16787000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4405019 - 4405085
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  4405019 tacatggttaattttaattaataatcttattttaaattgtacttttattgacaaaatgataaacctc 4405085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 34135849 - 34135783
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||    
T  34135849 tgactgttgatataatttgggataaatttttcgcccgggctccataaattttctggctccgccactg 34135783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 15839292 - 15839354
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  15839292 tggtcaattttaattaataatcctattttaaattgcacttttgttgacaaaatgataaacctc 15839354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42231917 - 42231982
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacct 66  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  42231917 tacagggtcaatttcaattaataatcctattttaaattgtacttttgttgacaaaatgataaacct 42231982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 3647943 - 3647881
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  3647943 tggtcaatttcaattaataaccctattttaaattgtacttttgttgacaaaatgataaacctc 3647881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 36409496 - 36409561
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  36409496 tacatggtcaatttcaattaataa-cctattttaaattgtacttttgttgacaaaatgataaacctc 36409561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 29727536 - 29727477
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||||| ||||||||    
T  29727536 tggtcaatttcaattaataaccctattttaaattgtacttttgttgacaaaatgataaac 29727477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40470023 - 40469969
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaa 55  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||    
T  40470023 tacatggtcaatttcaattaataaccctattttaaattgtacttttgttgacaaa 40469969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 3436248 - 3436299
Alignment:
Q  4 atggtcaattttaattaataatcctattttaaattgtacttttattgacaaa 55  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||    
T  3436248 atggtcaatttcaattaataaccctattttaaattgtacttttgttgacaaa 3436299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 4405135 - 4405194
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctcc 172  Q
    ||||||||| |||||||||||||||||||||||||||  || ||||||||| ||||||||    
T  4405135 tgactgttgctataatttgggataaatttttcgcccgagcttcataaattttctggctcc 4405194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 7279044 - 7279099
Alignment:
Q  8 tcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaa 63  Q
    ||||||| ||||||||||| ||||||||||||||||||| ||||| || |||||||    
T  7279044 tcaatttcaattaataatcttattttaaattgtacttttgttgactaaatgataaa 7279099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 24019542 - 24019483
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    |||| ||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||    
T  24019542 tggttaatttaaattaataaccctattttaaattgtacttttgttgataaaatgataaac 24019483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 28524214 - 28524273
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    |||| ||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||    
T  28524214 tggttaatttaaattaataaccctattttaaattgtacttttgttgataaaatgataaac 28524273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 39915530 - 39915589
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    |||| ||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||    
T  39915530 tggttaatttaaattaataaccctattttaaattgtacttttgttgataaaatgataaac 39915589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 27046966 - 27047019
Alignment:
Q  126 aatttgggataaatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||| ||||||||||| |||||| ||||||| ||||||||||||||| ||||    
T  27046966 aatttgcgataaattttttgcccgggctccatatatttcctggctccgccactg 27047019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 29727387 - 29727350
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgc 174  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  29727387 aattttttgcccggactccataaatttcctggctccgc 29727350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 36409650 - 36409703
Alignment:
Q  126 aatttgggataaatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||| |||||||||||||||||| ||| ||||||||||| ||||||| ||||    
T  36409650 aatttgcgataaatttttcgcccgggctctataaatttcctagctccgccactg 36409703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 27046841 - 27046889
Alignment:
Q  19 taataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||| ||||||||||||||||||| | |||||||| |||||||||||    
T  27046841 taataaccctattttaaattgtacttctgttgacaaaatgataaacctc 27046889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 28524359 - 28524403
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactgag 181  Q
    |||||||||||| | ||||||||||||||||||||||| ||||||    
T  28524359 aatttttcgcccaggctccataaatttcctggctccgccactgag 28524403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 24019397 - 24019354
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactga 180  Q
    |||||||||||| | ||||||||||||||||||||||| |||||    
T  24019397 aatttttcgcccaggctccataaatttcctggctccgccactga 24019354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 23403222 - 23403276
Alignment:
Q  126 aatttgggataaatttttcgcccggactccataaatttcctggctccgcgactga 180  Q
    ||||||||| |||  |||||||||  ||||||||||||||||||||||| |||||    
T  23403222 aatttgggaaaaaaatttcgcccgagctccataaatttcctggctccgccactga 23403276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 29632413 - 29632459
Alignment:
Q  16 aattaataatcctattttaaattgtacttttattgacaaattgataa 62  Q
    ||||||||| ||||||||||||||||||||| |||| ||| ||||||    
T  29632413 aattaataaccctattttaaattgtacttttgttgataaaatgataa 29632459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 29632549 - 29632591
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||| | ||||||||||||||||||||||| ||||    
T  29632549 aatttttcgcccaggctccataaatttcctggctccgccactg 29632591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 39915675 - 39915717
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||| | ||||||||||||||||||||||| ||||    
T  39915675 aatttttcgcccaggctccataaatttcctggctccgccactg 39915717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2728006 - 2727961
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtactttt 46  Q
    |||| ||||||||| ||||||||| | |||||||||||||||||||    
T  2728006 tacagggtcaatttcaattaataaccgtattttaaattgtactttt 2727961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 40469906 - 40469866
Alignment:
Q  133 gataaatttttcgcccggactccataaatttcctggctccg 173  Q
    ||||||| ||| ||||||||||||||||||| |||||||||    
T  40469906 gataaatattttgcccggactccataaattttctggctccg 40469866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17331152 - 17331086
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17331152 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaaatgataaacctc 17331086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12278011 - 12277945
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  12278011 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaaatgataatcctc 12277945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 17331036 - 17330970
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  17331036 tgactgttgatataatttgggataaatttttcgcccgggctccataaatttcctggctccgccactg 17330970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 37255643 - 37255709
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  37255643 tacatggtcaattttaattaataatcctattttaaattgtatttttattgacaaaatgataaacctc 37255709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 31681377 - 31681443
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||    
T  31681377 tacatggtcaattttaattaataatcctattttaaattatagttttattgacaaaatgataaacctc 31681443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33431331 - 33431397
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||    
T  33431331 tacatggtcaattttaattaataatcctattttaaattatagttttattgacaaaatgataaacctc 33431397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 12277896 - 12277835
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgc 174  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  12277896 tgactgttgatataatttgggataaatttttcgcccgggctccataaatttccctgctccgc 12277835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 36292524 - 36292572
Alignment:
Q  126 aatttgggataaatttttcgcccggactccataaatttcctggctccgc 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36292524 aatttgggataaatttttcgcccggactccataaatttcctggctccgc 36292572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 10036922 - 10036984
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  10036922 tggtcaatttcaattaataaccctattttaaattgtacttttgttgacaaaatgataaacctc 10036984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 16155906 - 16155968
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  16155906 tggtcaatttcaattaataaccctattttaaattgtacttttgttgacaaaatgataaacctc 16155968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 19986459 - 19986521
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  19986459 tggtcaatttcaattaataatcctattttaaattgtacgtttgttgacaaaatgataaacctc 19986521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 33431449 - 33431515
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||| ||||    
T  33431449 tgaccgttgatataatttaggataaatttttcgcccgggctccataaattttctggctccgccactg 33431515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 43069857 - 43069923
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| ||||| || |||||||||||    
T  43069857 tacatggtcaatttcaattaataaccctattttaaattgtacttttgttgactaaatgataaacctc 43069923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 31681495 - 31681556
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgc 174  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||    
T  31681495 tgaccgttgatataatttaggataaatttttcgcccgggctccataaattttctggctccgc 31681556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 13818994 - 13819054
Alignment:
Q  7 gtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  13818994 gtcaatttcaattaataaccctattttaaattgtacttttgttgacaaaatgataaacctc 13819054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 16333052 - 16332990
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||| |||||||||||||||| |||| |||||||| |||||||||||    
T  16333052 tggtcaatttcaattaataaccctattttaaattgtaattttgttgacaaaatgataaacctc 16332990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 39435715 - 39435777
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||| ||| |||||||||||    
T  39435715 tggtcaatttcaattaataaccctattttaaattgtacttttgttgataaaatgataaacctc 39435777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 39656679 - 39656617
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||| |||||||||||||||| |||| |||||||| |||||||||||    
T  39656679 tggtcaatttcaattaataaccctattttaaattgtatttttgttgacaaaatgataaacctc 39656617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 42888549 - 42888591
Alignment:
Q  180 agaagaggagaacgagaaggaagaaacatagaaacatgagcag 222  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42888549 agaagaggagaacgagaaggaagaaacatagaaacatgagcag 42888591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 37255758 - 37255819
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgc 174  Q
    ||||||| |||||||||||| ||||||||||||||||  |||| ||||||||||||||||||    
T  37255758 tgactgtcgatataatttggaataaatttttcgcccgagctccctaaatttcctggctccgc 37255819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 36292371 - 36292433
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||| | ||||||||||||||||||| |||| ||| |||||||||||    
T  36292371 tggtcaatttcaattaataaccttattttaaattgtacttttgttgataaaatgataaacctc 36292433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 36292772 - 36292710
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||| ||||| ||||||||| ||||||||||||||||||||| |||| ||| |||||||||||    
T  36292772 tggttaatttcaattaataaccctattttaaattgtacttttgttgataaaatgataaacctc 36292710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 43070018 - 43070059
Alignment:
Q  133 gataaatttttcgcccggactccataaatttcctggctccgc 174  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  43070018 gataaatttttcgcccgggctccataaatttcctggctccgc 43070059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 19986618 - 19986661
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactga 180  Q
    ||||||| |||||||||||||||||||||||||||||| |||||    
T  19986618 aattttttgcccggactccataaatttcctggctccgccactga 19986661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 26282469 - 26282410
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    |||| ||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||    
T  26282469 tggttaatttaaattaataaccctattttaaattgtacttttgttgataaaatgataaac 26282410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 31500873 - 31500811
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacct 66  Q
    ||||||||||| || ||||||| |||||||||||||||||||||   |||||||| ||||||||||    
T  31500873 tacatggtcaacttcaattaattatcctattttaaattgtactt---ttgacaaaatgataaacct 31500811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 1775530 - 1775468
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||| ||||| | |||||||||||| |||||| |||||||| |||||||||||    
T  1775530 tggtcaatttcaatcaataaccatattttaaattgcacttttgttgacaaaatgataaacctc 1775468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 26282323 - 26282280
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactga 180  Q
    |||||||||||| | ||||||||||||||||||||||| |||||    
T  26282323 aatttttcgcccaggctccataaatttcctggctccgccactga 26282280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 28801893 - 28801940
Alignment:
Q  8 tcaattttaattaataatcctattttaaattgtacttttattgacaaa 55  Q
    ||||||| |||||| || ||||||||||||||||||||| ||||||||    
T  28801893 tcaatttcaattaaaaaccctattttaaattgtacttttgttgacaaa 28801940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 31500728 - 31500681
Alignment:
Q  126 aatttgggataaatttttcgcccggactccataaatttcctggctccg 173  Q
    |||||| ||||||||||| |  ||||||||||||||||||||||||||    
T  31500728 aatttgcgataaattttttgttcggactccataaatttcctggctccg 31500681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 28801996 - 28802042
Alignment:
Q  126 aatttgggataaatttttcgcccggactccataaatttcctggctcc 172  Q
    |||||| ||| ||||||| |||||||||||||||||||| |||||||    
T  28801996 aatttgcgattaattttttgcccggactccataaatttcttggctcc 28802042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 36292615 - 36292573
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||| | ||||||||||||||||||||||| ||||    
T  36292615 aatttttcgccccggctccataaatttcctggctccgccactg 36292573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 39435873 - 39435915
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||    
T  39435873 aattttttgcccgggctccataaatttcctggctccgccactg 39435915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 10037073 - 10037110
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgc 174  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  10037073 aattttttgcccgggctccataaatttcctggctccgc 10037110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 16332910 - 16332873
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgc 174  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  16332910 aattttttgcccgggctccataaatttcctggctccgc 16332873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 33007062 - 33007114
Alignment:
Q  128 tttgggataaatttttcgcccggactccataaatttcctggctccgcgactga 180  Q
    |||| ||||||||||| |||| ||||| ||||| ||||||||||||| |||||    
T  33007062 tttgcgataaattttttgcccagactctataaaattcctggctccgccactga 33007114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11017426 - 11017360
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11017426 tacatggtcgattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 11017360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 45183991 - 45184057
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  45183991 tacatggtcaattttaattaataatcctattttaaattgtagttttattgacaaaatgataaacctc 45184057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 6930050 - 6929984
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  6930050 tacatggtaaattttaattaataatcctattttaaattgtagttttattgacaaaatgataaacctc 6929984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 11017314 - 11017248
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||    
T  11017314 tgactattgatataatttgggataaatttttcgcccgggctccgtaaatttcctggctccgccactg 11017248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 6929933 - 6929867
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||| |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||| ||||    
T  6929933 tgaccgttgatataatttgcgataaatttttcgcccaggctccataaatttcctggctccgccactg 6929867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 34083273 - 34083211
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||| |||||||||||||| |||||| |||||||| |||||||||||    
T  34083273 tggtcaatttcaattaataaccctattttaaattgcacttttgttgacaaaatgataaacctc 34083211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 45336869 - 45336923
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaa 55  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||    
T  45336869 tacatggtcaatttcaattaataaccctattttaaattgtacttttgttgacaaa 45336923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 35515007 - 35515072
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacct 66  Q
    |||||||||||||| ||||||||| |||||||||||||||| |||| |||| ||| ||||||||||    
T  35515007 tacatggtcaatttcaattaataaccctattttaaattgtatttttgttgataaaatgataaacct 35515072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 40080893 - 40080832
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacct 66  Q
    |||||||||| ||||||||| | ||||||||||||||||||| |||||||| ||||||||||    
T  40080893 tggtcaatttcaattaataaccttattttaaattgtacttttgttgacaaaatgataaacct 40080832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 5136311 - 5136358
Alignment:
Q  8 tcaattttaattaataatcctattttaaattgtacttttattgacaaa 55  Q
    ||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  5136311 tcaatttcaattaataatcctattttaaattgtatttttgttgacaaa 5136358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 6268573 - 6268514
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    |||| ||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||    
T  6268573 tggttaatttcaattaataaccctattttaaattgtacttttgttgataaaatgataaac 6268514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 22967595 - 22967536
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    |||| ||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||    
T  22967595 tggttaatttcaattaataaccctattttaaattgtacttttgttgataaaatgataaac 22967536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1185665 - 1185611
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaa 55  Q
    |||||||||||||| ||||||||| |||||||||||||  |||||| ||||||||    
T  1185665 tacatggtcaatttcaattaataaccctattttaaatttcacttttgttgacaaa 1185611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 19391162 - 19391223
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| | ||||||| ||||||||||||||||||||| |||| ||| |||||||||||    
T  19391162 tggtcaatttcagttaataa-cctattttaaattgtacttttgttgataaaatgataaacctc 19391223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 19564672 - 19564610
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaa 63  Q
    |||||||||||||| ||||||||| | ||||||| |||||||||||  ||||||| |||||||    
T  19564672 tacatggtcaatttcaattaataaccatattttacattgtacttttgatgacaaaatgataaa 19564610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 27936177 - 27936227
Alignment:
Q  16 aattaataatcctattttaaattgtacttttattgacaaattgataaacct 66  Q
    ||||||||| ||||||||||||| ||||||| |||||||| ||||||||||    
T  27936177 aattaataaccctattttaaattttacttttgttgacaaaatgataaacct 27936227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 45184106 - 45184160
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctg 167  Q
    |||| ||||||||||||||| |||||||||||||||   ||||||||||||||||    
T  45184106 tgaccgttgatataatttggaataaatttttcgcccaagctccataaatttcctg 45184160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 1185547 - 1185500
Alignment:
Q  133 gataaatttttcgcccggactccataaatttcctggctccgcgactga 180  Q
    ||||||||||| ||||||||| ||||||||| |||||||||| |||||    
T  1185547 gataaattttttgcccggacttcataaattttctggctccgccactga 1185500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 39772806 - 39772865
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    |||| ||||| ||||||||| ||||||||||||||| ||||| |||| ||| ||||||||    
T  39772806 tggttaatttaaattaataaccctattttaaattgtccttttgttgataaaatgataaac 39772865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 22967437 - 22967395
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||| | ||||||||||||||||||||||| ||||    
T  22967437 aatttttcgcccaggctccataaatttcctggctccgccactg 22967395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 27936300 - 27936346
Alignment:
Q  126 aatttgggataaatttttcgcccggactccataaatttcctggctcc 172  Q
    |||||| ||||||||||| ||||| |||||||||||||||| |||||    
T  27936300 aatttgcgataaattttttgcccgaactccataaatttccttgctcc 27936346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 19564521 - 19564480
Alignment:
Q  133 gataaatttttcgcccggactccataaatttcctggctccgc 174  Q
    |||||||||||||||||  |||||||||||||||| ||||||    
T  19564521 gataaatttttcgcccgagctccataaatttcctgactccgc 19564480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 33041961 - 33041998
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaatt 38  Q
    ||||| |||||||||||||||||||||||||| |||||    
T  33041961 tacatagtcaattttaattaataatcctatttaaaatt 33041998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26625755 - 26625821
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  26625755 tacatggtcaattttaattaataatcctatttgaaattgtacttttattgacaaaatgataaacctc 26625821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 38637538 - 38637472
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38637538 tacatggtcaattttatttaataatcctattttaaattgtacttttattgacaaaatgataaacctc 38637472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 43183625 - 43183559
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  43183625 tacatggtcaattttaattaataatcctattttaaattgtagttttattgacaaaatgataaacctc 43183559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 37001389 - 37001329
Alignment:
Q  7 gtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37001389 gtcaattttaattaataatcctattttaaattgtacttttattgacaaaatgataaacctc 37001329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 37001280 - 37001213
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgcgactga 180  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  37001280 tgactgttgatataatttgggataaatttttcgcccgggctccataaatttcctagctccgccactga 37001213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 8866883 - 8866821
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  8866883 tggtcaattttaattaataatcttattttaaattgtacttttattgacaaaatgataaacctc 8866821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 7003637 - 7003703
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| |||||||||||    
T  7003637 tacatggtcaatttcaattaataatcatattttaaattgtacttttgttgacaaaatgataaacctc 7003703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 7049508 - 7049574
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| |||||||||||    
T  7049508 tacatggtcaatttcaattaataatcatattttaaattgtacttttgttgacaaaatgataaacctc 7049574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 8866772 - 8866706
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||    
T  8866772 tgactgttgatataatttgggataaatttttcgcccgaacttcataaatttcctagctccgccactg 8866706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 5556477 - 5556538
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacct 66  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||||| ||||||||||    
T  5556477 tggtcaatttcaattaataaccctattttaaattgtacttttgttgacaaaatgataaacct 5556538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 3113272 - 3113212
Alignment:
Q  7 gtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  3113272 gtcaatttcaattaataaccctattttaaattgtacttttgttgacaaaatgataaacctc 3113212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 36659189 - 36659237
Alignment:
Q  19 taataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36659189 taataatcctattttaaattgtacttttattgacaaaatgataaacctc 36659237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 34468483 - 34468424
Alignment:
Q  8 tcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    ||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  34468483 tcaatttcaattaataaccctattttaaattgtacttttgttgacaaaatgataaacctc 34468424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 8395139 - 8395201
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||| |||||||||||||| |||||| |||||||| |||||||||||    
T  8395139 tggtcaatttcaattaataaacctattttaaattgcacttttgttgacaaaatgataaacctc 8395201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 36631831 - 36631893
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||| |||||||||||||| |||||| |||||||| |||||||||||    
T  36631831 tggtcaatttcaattaataaccctattttaaattgcacttttgttgacaaaatgataaacctc 36631893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 38637421 - 38637360
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgc 174  Q
    ||||| |||||||||||| |||||||||||||| ||| |||||||||||||||||| |||||    
T  38637421 tgactattgatataatttaggataaatttttcgtccgaactccataaatttcctggatccgc 38637360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 43183507 - 43183441
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||| ||||||||||||| ||||||||||||||||| | || ||||||||| |||||||||| ||||    
T  43183507 tgaccgttgatataatttaggataaatttttcgcccaggcttcataaattttctggctccgccactg 43183441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 11019742 - 11019694
Alignment:
Q  4 atggtcaattttaattaataatcctattttaaattgtacttttattgac 52  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  11019742 atggtcaatttcaattaataaccctattttaaattgtacttttgttgac 11019694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 26625876 - 26625941
Alignment:
Q  117 tgttgatataatttgggataaattttt---cgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||||||||||||||||||   ||||| | ||||||||||||||||| ||||| ||||    
T  26625876 tgttgatataatttgggataaatttttcgccgcccaggctccataaatttcctggatccgccactg 26625941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 33686553 - 33686608
Alignment:
Q  11 attttaattaataatcctattttaaattgtacttttattgacaaattgataaacct 66  Q
    |||| ||||||||| | ||||||||||||||||||| |||||||| ||||||||||    
T  33686553 atttcaattaataaccatattttaaattgtacttttgttgacaaaatgataaacct 33686608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 14775742 - 14775688
Alignment:
Q  10 aattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    ||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||    
T  14775742 aatttcaattaataaccctattttaaattgtacttttgttgataaaatgataaac 14775688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 15226195 - 15226141
Alignment:
Q  10 aattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    ||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||    
T  15226195 aatttcaattaataaccctattttaaattgtacttttgttgataaaatgataaac 15226141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 34468380 - 34468332
Alignment:
Q  126 aatttgggataaatttttcgcccggactccataaatttcctggctccgc 174  Q
    ||||| |||| ||||||| |||||| |||||||||||||||||||||||    
T  34468380 aatttaggattaattttttgcccgggctccataaatttcctggctccgc 34468332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 180
Target Start/End: Original strand, 36631988 - 36632031
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactga 180  Q
    ||||||| |||||| ||||||||||||||||||||||| |||||    
T  36631988 aattttttgcccgggctccataaatttcctggctccgccactga 36632031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 3113131 - 3113089
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||    
T  3113131 aatttttcgcccgaactccataaattttctggctccgccactg 3113089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 14775589 - 14775547
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||| | ||||||||||||||||||||||| ||||    
T  14775589 aatttttcgcccaggctccataaatttcctggctccgccactg 14775547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 15226042 - 15226000
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||| | ||||||||||||||||||||||| ||||    
T  15226042 aatttttcgcccaggctccataaatttcctggctccgccactg 15226000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 45419593 - 45419659
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  45419593 tacatggtcaattttaattaataatcctattttaaattgtagttttattgacaaaatgataaacctc 45419659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 12755897 - 12755830
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgcgactga 180  Q
    |||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  12755897 tgaccgttgatataatttgggataaatttttcgcccgagctccataaatttcctggctccgccactga 12755830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 42442996 - 42443062
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  42442996 tacatggtcaatttcaattaataaccctattttaaattgtacttttgttgacaaaatgataaacctc 42443062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 771745 - 771811
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||| ||||||||| |||||||||||||||| |||| |||||||| |||||||||||    
T  771745 tacatggtcaatttcaattaataaccctattttaaattgtatttttgttgacaaaatgataaacctc 771811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 8058499 - 8058433
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||| ||||||| |||||||||||||||||||||||||||| || |||||||| |||||||||||    
T  8058499 tacatgatcaatttcaattaataatcctattttaaattgtactattgttgacaaaatgataaacctc 8058433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 16406140 - 16406206
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| || ||||| |||||||||||    
T  16406140 tacatggtcaatttcaattaataaccctattttaaattgtacttttgttaacaaaatgataaacctc 16406206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 45419711 - 45419777
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||| ||||    
T  45419711 tgaccgttgatataatttgggataaatttttcgcccgggctccataaattttctgactccgccactg 45419777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 26161889 - 26161824
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacct 66  Q
    |||| ||| ||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  26161889 tacagggtgaatttcaattaataaccctattttaaattgtacttttattgacaaaatgataaacct 26161824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 2286915 - 2286977
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||| |||||||||||||| |||||| |||||||| |||||||||||    
T  2286915 tggtcaatttcaattaataaccctattttaaattgcacttttgttgacaaaatgataaacctc 2286977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 17444187 - 17444125
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||| ||| |||||||||||    
T  17444187 tggtcaatttcaattaataaccctattttaaattgtacttttgttgataaaatgataaacctc 17444125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 26238626 - 26238677
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgac 52  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| |||||    
T  26238626 tacatggtcaatttcaattaataaccctattttaaattgtacttttcttgac 26238677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 18982559 - 18982621
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||| ||||| ||||||||| | ||||||||||||||||||| |||||||| |||||||||||    
T  18982559 tggtaaatttcaattaataaccatattttaaattgtacttttgttgacaaaatgataaacctc 18982621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 31580888 - 31580826
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||| |||||||||||||||| |||| ||||| || |||||||||||    
T  31580888 tggtcaatttcaattaataaccctattttaaattgtatttttgttgacgaaatgataaacctc 31580826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4554459 - 4554394
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacct 66  Q
    |||||||||||||| ||||||||| | |||||||||||||| |||| |||||||| ||| ||||||    
T  4554459 tacatggtcaatttcaattaataaccatattttaaattgtatttttgttgacaaaatgagaaacct 4554394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 26161751 - 26161698
Alignment:
Q  126 aatttgggataaatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||    
T  26161751 aatttgcgataaattttttgcccgggctccataaatttcctggctccgccactg 26161698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 6402955 - 6402896
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    |||| ||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||    
T  6402955 tggttaatttaaattaataaccctattttaaattgtacttttgttgataaaatgataaac 6402896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 32126337 - 32126282
Alignment:
Q  8 tcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaa 63  Q
    ||||||| ||||||||| ||||||||||| ||||||||| |||||||| |||||||    
T  32126337 tcaatttcaattaataaccctattttaaactgtacttttgttgacaaaatgataaa 32126282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 171
Target Start/End: Complemental strand, 17090269 - 17090231
Alignment:
Q  133 gataaatttttcgcccggactccataaatttcctggctc 171  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  17090269 gataaattttttgcccggactccataaatttcctggctc 17090231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 772287 - 772335
Alignment:
Q  126 aatttgggataaatttttcgcccggactccataaatttcctggctccgc 174  Q
    |||||| ||||| ||||| |||||| |||||||||||||||||||||||    
T  772287 aatttgcgataatttttttgcccgggctccataaatttcctggctccgc 772335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 41250784 - 41250725
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    |||| ||||| ||||||||| |||||||||||||| |||||| |||| ||| ||||||||    
T  41250784 tggttaatttcaattaataaccctattttaaattgcacttttgttgataaaatgataaac 41250725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 6402810 - 6402768
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||| | ||||||||||||||||||||||| ||||    
T  6402810 aatttttcgcccaggctccataaatttcctggctccgccactg 6402768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 12755984 - 12755946
Alignment:
Q  29 attttaaattgtacttttattgacaaattgataaacctc 67  Q
    ||||||||||||| ||||||||||||| |||||||||||    
T  12755984 attttaaattgtagttttattgacaaaatgataaacctc 12755946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 44084178 - 44084132
Alignment:
Q  133 gataaatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||||||| | |||||||||||| |||||||||| ||||    
T  44084178 gataaatttttcgcccaggctccataaattttctggctccgccactg 44084132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 4554341 - 4554300
Alignment:
Q  133 gataaatttttcgcccggactccataaatttcctggctccgc 174  Q
    ||||||||||| |||| ||||||||||||||||| |||||||    
T  4554341 gataaattttttgcccagactccataaatttcctagctccgc 4554300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 29257543 - 29257595
Alignment:
Q  128 tttgggataaatttttcgcccggactccataaatttcctggctccgcgactga 180  Q
    |||| ||||||||||| |||| ||||| ||||| ||||||||||||| |||||    
T  29257543 tttgcgataaattttttgcccagactctataaaattcctggctccgccactga 29257595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 28997740 - 28997806
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||    
T  28997740 tacatggtcaattttaattaataatcctattttaaattatagttttattgacaaaatgataaacctc 28997806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 33228507 - 33228444
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||| ||||||||    
T  33228507 tacatggtcaatttcaattaataaccctattttaaattgtacttttgttgacaaaatgataaac 33228444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 28997857 - 28997923
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||| ||||||||||||||||||||||||||||||||  |||||||||||||||| |||||| ||||    
T  28997857 tgaccgttgatataatttgggataaatttttcgcccgagctccataaatttcctgactccgccactg 28997923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 29744281 - 29744347
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||| | ||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  29744281 tacatggtcaatctcaattaataaccctattttaaattgtacttttgttgacaaaatgataaacctc 29744347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 34947978 - 34947916
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  34947978 tggtcaatttcaattaataaccctattttaaattgtacttttgttgacaaaatgataaacctc 34947916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 29744433 - 29744479
Alignment:
Q  134 ataaatttttcgcccggactccataaatttcctggctccgcgactga 180  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||    
T  29744433 ataaatttttcgcccgggctccataaatttcctggctccgccactga 29744479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 399633 - 399692
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    |||| ||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||    
T  399633 tggttaatttaaattaataaccctattttaaattgtacttttgttgataaaatgataaac 399692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 13838814 - 13838872
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaa 63  Q
    |||||||||| ||||||||| |||||||||||||||| |||| |||| ||| |||||||    
T  13838814 tggtcaatttcaattaataaccctattttaaattgtatttttgttgataaaatgataaa 13838872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31028110 - 31028056
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaa 55  Q
    |||||||||||||| ||||||||  | ||||||||||||||||||| ||||||||    
T  31028110 tacatggtcaatttcaattaatagccatattttaaattgtacttttgttgacaaa 31028056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 34947835 - 34947798
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgc 174  Q
    |||||||||||||| |||||||||||||||||||||||    
T  34947835 aatttttcgcccgggctccataaatttcctggctccgc 34947798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 34253150 - 34253187
Alignment:
Q  10 aattttaattaataatcctattttaaattgtactttta 47  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  34253150 aatttcaattaataaccctattttaaattgtactttta 34253187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11957514 - 11957448
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  11957514 tacatggtcaatttcaattaataatcctattttaaattgtacttttgttgacaaaatgataaacctc 11957448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 35908567 - 35908633
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  35908567 tacattgtcaattttaattaataatcctattttaaattgtatttttattgacaaaatgataaacctc 35908633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 35908682 - 35908749
Alignment:
Q  113 tgactgttgatataatttgggataaatttttcgcccggactccataaatttcctggctccgcgactga 180  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||| |||||    
T  35908682 tgactgttgatataatttgggataaatttttcgcccgggctccttaaatttcttggctccgccactga 35908749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 17446304 - 17446370
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||| |||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  17446304 tacatggtcaatttcaattaataatcctattttaaattgcacttttgttgacaaaatgataaacctc 17446370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15209444 - 15209378
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||| ||||||    
T  15209444 tacatggtcaatttcaattaataaccctattttaaattgtacttttgttgacaaaatgatgaacctc 15209378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 23314009 - 23314071
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  23314009 tggtcaatttcaattaataaccctattttaaattgtacttttgttgacaaaatgataaacctc 23314071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 32981209 - 32981148
Alignment:
Q  6 ggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    ||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  32981209 ggtcaatttcaattaataaccctattttaaattgtacttttgttgacaaaatgataaacctc 32981148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3829963 - 3830028
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacct 66  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||||| |||||||| | ||||||||    
T  3829963 tacagggtcaatttcaattaataaccctattttaaattgtacttttgttgacaaaattataaacct 3830028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 7434439 - 7434499
Alignment:
Q  7 gtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||| ||||||||| |||||||||||||| |||||| |||||||| |||||||||||    
T  7434439 gtcaatttcaattaataaccctattttaaattgcacttttgttgacaaaatgataaacctc 7434499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 42310090 - 42310031
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    |||||||||| ||||||||||| ||||||||||||||||||| || ||||| ||||||||    
T  42310090 tggtcaatttcaattaataatcatattttaaattgtacttttgtttacaaaatgataaac 42310031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33490391 - 33490441
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattga 51  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||| ||||    
T  33490391 tacatggtcaatttcaattaataaccctattttaaattgtacttttgttga 33490441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 7434579 - 7434621
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  7434579 aatttttcgcccgggctccataaatttcctggctccgccactg 7434621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 3830100 - 3830148
Alignment:
Q  126 aatttgggataaatttttcgcccggactccataaatttcctggctccgc 174  Q
    |||||| ||||||||||| |||||  |||||||||||||||||||||||    
T  3830100 aatttgcgataaattttttgcccgagctccataaatttcctggctccgc 3830148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 41971301 - 41971253
Alignment:
Q  126 aatttgggataaatttttcgcccggactccataaatttcctggctccgc 174  Q
    |||||| ||||||||||| | | ||||||||||||||||||||||||||    
T  41971301 aatttgcgataaattttttgtctggactccataaatttcctggctccgc 41971253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 41971408 - 41971357
Alignment:
Q  4 atggtcaattttaattaataatcctattttaaattgtacttttattgacaaa 55  Q
    ||||||||||| |||||| || ||||||||||||||||||||| ||| ||||    
T  41971408 atggtcaatttcaattaacaaccctattttaaattgtacttttgttgtcaaa 41971357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 320721 - 320667
Alignment:
Q  126 aatttgggataaatttttcgcccggactccataaatttcctggctccgcgactga 180  Q
    |||||| |||| | |||| |||||| ||||||||||||||||||||||| |||||    
T  320721 aatttgcgatacaatttttgcccgggctccataaatttcctggctccgccactga 320667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 26159381 - 26159423
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||| | ||||||||||||||||||||||| ||||    
T  26159381 aatttttcgcccaggctccataaatttcctggctccgccactg 26159423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 11957358 - 11957302
Alignment:
Q  125 taatttgggataaatttttcgcccggactccataaatttcctggctccgcgactgag 181  Q
    ||||||| ||||||||||| ||||  ||| ||||||||| |||||||||| ||||||    
T  11957358 taatttgcgataaattttttgcccaaacttcataaattttctggctccgccactgag 11957302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 32226 - 32291
Alignment:
Q  1 tacatggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacct 66  Q
    |||||||||||||| ||||||||| |||||||||||||||| |||| |||||||| ||||||||||    
T  32226 tacatggtcaatttcaattaataaccctattttaaattgtatttttgttgacaaaatgataaacct 32291  T

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Target: scaffold0154; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 32336 - 32388
Alignment:
Q  126 aatttgggataaatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||| |||||||||||  ||||| ||||||||||||||||||||||| ||||    
T  32336 aatttgcgataaattttta-cccgggctccataaatttcctggctccgccactg 32388  T

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Target: scaffold0069 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 18574 - 18636
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaacctc 67  Q
    |||||||||| ||||||||| ||||| ||||||||||||||| |||| ||| |||||||||||    
T  18574 tggtcaatttcaattaataaccctatattaaattgtacttttgttgataaaatgataaacctc 18636  T

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Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 479608 - 479549
Alignment:
Q  5 tggtcaattttaattaataatcctattttaaattgtacttttattgacaaattgataaac 64  Q
    |||| ||||| ||||||||| ||||||||||||||||||||| |||| ||| ||||||||    
T  479608 tggttaatttaaattaataaccctattttaaattgtacttttgttgataaaatgataaac 479549  T

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Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 479460 - 479418
Alignment:
Q  137 aatttttcgcccggactccataaatttcctggctccgcgactg 179  Q
    |||||||||||| | ||||||||||||||||||||||| ||||    
T  479460 aatttttcgcccaggctccataaatttcctggctccgccactg 479418  T

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Target: scaffold0178 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 21997 - 21949
Alignment:
Q  126 aatttgggataaatttttcgcccggactccataaatttcctggctccgc 174  Q
    |||||| ||||||||||| ||| || |||||||||||||||||||||||    
T  21997 aatttgcgataaattttttgcctgggctccataaatttcctggctccgc 21949  T

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Target: scaffold0178; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 27499 - 27451
Alignment:
Q  126 aatttgggataaatttttcgcccggactccataaatttcctggctccgc 174  Q
    |||||| ||||||||||| ||| || |||||||||||||||||||||||    
T  27499 aatttgcgataaattttttgcctgggctccataaatttcctggctccgc 27451  T

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Target: scaffold0618 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 1872 - 1924
Alignment:
Q  128 tttgggataaatttttcgcccggactccataaatttcctggctccgcgactga 180  Q
    |||| ||||||||||| |||| ||||| ||||| ||||||||||||| |||||    
T  1872 tttgcgataaattttttgcccagactctataaaattcctggctccgccactga 1924  T

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