View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1257_low_29 (Length: 226)

Name: NF1257_low_29
Description: NF1257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1257_low_29
NF1257_low_29
[»] chr8 (1 HSPs)
chr8 (153-226)||(39793471-39793544)


Alignment Details
Target: chr8 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 39793471 - 39793544
Alignment:
153 gggactgagcacaacaaaagataccatcatacgaagtggtaggttgccaagaaaaccctacgtttaccgccgct 226  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||    
39793471 gggactgagcacaactaaagataccatcatacgaagtggtaggttgccaagaaaaacctacaattaccgccgct 39793544  T

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