View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1257_low_34 (Length: 208)
Name: NF1257_low_34
Description: NF1257
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1257_low_34 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 39793435 - 39793531
Alignment:
| Q |
111 |
ccctgcaacaggtttgtttctacttcccnnnnnnnggggactgagcacaacaaaagataccatcatacgaagtggtaggttgccaagaaaaccctac |
207 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
39793435 |
ccctgcaacaggtttgtttctactttccacaaaaatgggactgagcacaactaaagataccatcatacgaagtggtaggttgccaagaaaaacctac |
39793531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 4477 times since January 2019
Visitors: 5896