View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12580_low_46 (Length: 252)

Name: NF12580_low_46
Description: NF12580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12580_low_46
NF12580_low_46
[»] chr6 (23 HSPs)
chr6 (1-237)||(31039645-31039881)
chr6 (77-186)||(8977518-8977627)
chr6 (76-155)||(29730294-29730373)
chr6 (77-155)||(14228209-14228286)
chr6 (77-155)||(28943852-28943929)
chr6 (56-154)||(29863386-29863484)
chr6 (76-155)||(3485681-3485760)
chr6 (56-155)||(33017721-33017819)
chr6 (58-176)||(10887027-10887145)
chr6 (79-176)||(22974635-22974731)
chr6 (79-176)||(23813670-23813766)
chr6 (81-186)||(30591215-30591320)
chr6 (79-145)||(2830773-2830839)
chr6 (84-186)||(30623350-30623452)
chr6 (77-145)||(5362985-5363053)
chr6 (100-176)||(6016896-6016972)
chr6 (77-187)||(17154639-17154750)
chr6 (80-155)||(18332771-18332846)
chr6 (81-144)||(31069675-31069738)
chr6 (77-199)||(1017817-1017939)
chr6 (77-155)||(17552670-17552747)
chr6 (92-177)||(30708024-30708108)
chr6 (97-157)||(33987244-33987304)
[»] chr2 (41 HSPs)
chr2 (77-199)||(9450274-9450396)
chr2 (77-199)||(20566056-20566178)
chr2 (77-192)||(34817561-34817676)
chr2 (77-199)||(15411661-15411783)
chr2 (77-185)||(23932582-23932690)
chr2 (57-155)||(34214034-34214132)
chr2 (79-147)||(25998093-25998161)
chr2 (56-199)||(19228422-19228564)
chr2 (56-147)||(43388857-43388948)
chr2 (77-199)||(14377442-14377563)
chr2 (77-199)||(16919193-16919314)
chr2 (77-199)||(27665083-27665204)
chr2 (77-155)||(40562160-40562238)
chr2 (56-145)||(12016663-12016752)
chr2 (76-168)||(2051630-2051722)
chr2 (84-199)||(9747341-9747456)
chr2 (77-155)||(5583641-5583718)
chr2 (80-186)||(43806380-43806486)
chr2 (77-145)||(39904140-39904208)
chr2 (91-186)||(11660971-11661065)
chr2 (50-145)||(16126651-16126746)
chr2 (77-176)||(22705472-22705570)
chr2 (81-155)||(5853546-5853622)
chr2 (80-149)||(7720135-7720204)
chr2 (81-155)||(16493615-16493691)
chr2 (81-155)||(22704556-22704632)
chr2 (90-151)||(24729664-24729725)
chr2 (81-155)||(25948058-25948134)
chr2 (87-176)||(45062225-45062314)
chr2 (76-155)||(38248503-38248580)
chr2 (84-155)||(40503064-40503135)
chr2 (56-114)||(29795054-29795112)
chr2 (128-193)||(2544255-2544320)
chr2 (77-142)||(14285371-14285435)
chr2 (115-176)||(15231886-15231947)
chr2 (77-146)||(22162169-22162237)
chr2 (56-145)||(26229946-26230034)
chr2 (110-147)||(38327858-38327895)
chr2 (115-155)||(25068561-25068600)
chr2 (131-199)||(35729188-35729256)
chr2 (115-151)||(39367114-39367150)
[»] scaffold0073 (1 HSPs)
scaffold0073 (80-199)||(16574-16692)
[»] chr8 (45 HSPs)
chr8 (80-199)||(12132003-12132122)
chr8 (84-156)||(5573312-5573384)
chr8 (119-186)||(7393296-7393363)
chr8 (56-176)||(14816188-14816307)
chr8 (56-176)||(14829433-14829552)
chr8 (77-199)||(35678314-35678435)
chr8 (56-185)||(6818013-6818142)
chr8 (77-146)||(7140550-7140619)
chr8 (79-147)||(8284660-8284728)
chr8 (77-156)||(13496813-13496893)
chr8 (56-155)||(2161384-2161482)
chr8 (56-167)||(3306126-3306236)
chr8 (76-155)||(44222517-44222595)
chr8 (77-155)||(9801686-9801763)
chr8 (77-187)||(20514650-20514760)
chr8 (77-146)||(33514592-33514661)
chr8 (124-199)||(9022099-9022177)
chr8 (100-187)||(34741716-34741802)
chr8 (77-150)||(9824976-9825049)
chr8 (77-181)||(35583383-35583487)
chr8 (81-155)||(40226070-40226146)
chr8 (77-145)||(10129121-10129189)
chr8 (84-152)||(12346030-12346098)
chr8 (56-144)||(13328034-13328122)
chr8 (115-150)||(26195495-26195530)
chr8 (77-152)||(26364076-26364150)
chr8 (77-199)||(26682085-26682207)
chr8 (80-155)||(34869605-34869680)
chr8 (80-151)||(37264521-37264592)
chr8 (80-155)||(38843724-38843799)
chr8 (80-155)||(45005990-45006065)
chr8 (100-146)||(15868052-15868098)
chr8 (118-187)||(34249735-34249805)
chr8 (77-199)||(39701842-39701963)
chr8 (62-155)||(4080476-4080569)
chr8 (62-155)||(4084625-4084718)
chr8 (62-155)||(4102932-4103025)
chr8 (85-146)||(38048029-38048090)
chr8 (110-146)||(6850669-6850705)
chr8 (77-125)||(7750685-7750733)
chr8 (62-146)||(9580201-9580285)
chr8 (115-199)||(9743917-9744000)
chr8 (87-155)||(10974637-10974705)
chr8 (77-137)||(19343937-19343997)
chr8 (56-144)||(40210914-40211002)
[»] chr7 (35 HSPs)
chr7 (80-199)||(7040291-7040409)
chr7 (76-193)||(3530159-3530275)
chr7 (77-187)||(19868131-19868241)
chr7 (80-155)||(8091395-8091470)
chr7 (56-199)||(19889337-19889479)
chr7 (56-199)||(33342985-33343127)
chr7 (80-173)||(31066800-31066894)
chr7 (77-155)||(39869140-39869218)
chr7 (118-191)||(2276733-2276806)
chr7 (82-155)||(11680101-11680176)
chr7 (62-150)||(42750291-42750378)
chr7 (50-144)||(9331952-9332046)
chr7 (62-176)||(12085993-12086106)
chr7 (85-155)||(38554263-38554333)
chr7 (82-146)||(24639564-24639628)
chr7 (115-155)||(47707967-47708007)
chr7 (56-199)||(7169999-7170141)
chr7 (122-197)||(36991041-36991116)
chr7 (80-155)||(46290031-46290105)
chr7 (77-199)||(5909321-5909442)
chr7 (85-199)||(23982794-23982908)
chr7 (77-147)||(25709490-25709560)
chr7 (80-186)||(45501479-45501585)
chr7 (118-187)||(7899537-7899606)
chr7 (115-176)||(12624692-12624753)
chr7 (102-155)||(24699177-24699230)
chr7 (77-153)||(12650838-12650914)
chr7 (77-145)||(24250331-24250399)
chr7 (77-145)||(39757202-39757270)
chr7 (84-152)||(47201258-47201326)
chr7 (85-144)||(16800578-16800636)
chr7 (77-144)||(36548553-36548620)
chr7 (87-154)||(38759975-38760042)
chr7 (115-177)||(8420894-8420956)
chr7 (48-145)||(3561970-3562067)
[»] chr1 (44 HSPs)
chr1 (80-199)||(6307523-6307641)
chr1 (77-155)||(36490796-36490874)
chr1 (77-186)||(39627623-39627732)
chr1 (81-149)||(11744917-11744985)
chr1 (109-199)||(49392132-49392220)
chr1 (80-186)||(23591718-23591824)
chr1 (77-155)||(25465176-25465253)
chr1 (56-155)||(1502803-1502901)
chr1 (118-177)||(9516639-9516698)
chr1 (56-199)||(39150366-39150508)
chr1 (77-155)||(34050366-34050444)
chr1 (77-199)||(41624847-41624968)
chr1 (62-155)||(3121121-3121213)
chr1 (87-152)||(51613058-51613122)
chr1 (62-146)||(8062207-8062291)
chr1 (77-145)||(44918042-44918110)
chr1 (56-155)||(6520708-6520806)
chr1 (56-199)||(6754468-6754610)
chr1 (56-199)||(17919450-17919592)
chr1 (115-150)||(19277843-19277878)
chr1 (81-176)||(30363057-30363152)
chr1 (118-173)||(35438773-35438828)
chr1 (67-146)||(40799350-40799429)
chr1 (77-155)||(7520080-7520158)
chr1 (77-155)||(23576497-23576574)
chr1 (77-155)||(25956666-25956744)
chr1 (85-155)||(30109089-30109159)
chr1 (115-173)||(33048177-33048235)
chr1 (77-146)||(32543142-32543211)
chr1 (77-146)||(43317507-43317575)
chr1 (77-186)||(47355430-47355538)
chr1 (77-138)||(51382389-51382450)
chr1 (77-145)||(313767-313835)
chr1 (119-179)||(13241816-13241876)
chr1 (62-155)||(5857991-5858084)
chr1 (80-146)||(22167355-22167421)
chr1 (85-155)||(51920514-51920584)
chr1 (80-141)||(22331643-22331704)
chr1 (77-170)||(38539104-38539196)
chr1 (77-170)||(38561322-38561414)
chr1 (128-181)||(52337834-52337887)
chr1 (115-147)||(2222326-2222358)
chr1 (122-186)||(26978110-26978174)
chr1 (122-154)||(35941106-35941138)
[»] chr4 (42 HSPs)
chr4 (77-187)||(2096888-2096998)
chr4 (62-155)||(34941280-34941373)
chr4 (77-186)||(49181089-49181198)
chr4 (56-186)||(52391294-52391424)
chr4 (77-155)||(42480005-42480083)
chr4 (118-187)||(51070447-51070516)
chr4 (77-176)||(6875518-6875617)
chr4 (77-155)||(9759225-9759302)
chr4 (56-186)||(19450952-19451082)
chr4 (100-182)||(37784916-37784998)
chr4 (77-167)||(39876848-39876937)
chr4 (77-155)||(50352320-50352397)
chr4 (79-155)||(35645084-35645163)
chr4 (100-193)||(54506463-54506556)
chr4 (77-145)||(36000032-36000100)
chr4 (78-186)||(38222304-38222412)
chr4 (77-154)||(53376493-53376574)
chr4 (77-152)||(49332350-49332425)
chr4 (116-155)||(55813920-55813959)
chr4 (118-176)||(16667446-16667504)
chr4 (80-186)||(19468214-19468320)
chr4 (77-146)||(23553587-23553657)
chr4 (80-186)||(27019280-27019386)
chr4 (77-199)||(27756579-27756700)
chr4 (80-186)||(51691362-51691467)
chr4 (77-146)||(24993548-24993617)
chr4 (85-173)||(25843316-25843405)
chr4 (118-155)||(27298949-27298986)
chr4 (115-155)||(4779519-4779559)
chr4 (77-176)||(7349706-7349804)
chr4 (77-176)||(10389330-10389428)
chr4 (115-146)||(16069299-16069330)
chr4 (80-155)||(23545496-23545571)
chr4 (80-155)||(24297392-24297467)
chr4 (65-144)||(29190909-29190988)
chr4 (80-146)||(17409844-17409910)
chr4 (123-173)||(33559264-33559314)
chr4 (77-155)||(40049576-40049653)
chr4 (110-155)||(33632285-33632330)
chr4 (102-199)||(44571568-44571664)
chr4 (115-155)||(8736893-8736933)
chr4 (77-145)||(10813587-10813655)
[»] chr3 (41 HSPs)
chr3 (58-199)||(46492382-46492523)
chr3 (77-157)||(15862986-15863066)
chr3 (77-155)||(49396368-49396446)
chr3 (56-185)||(37055419-37055548)
chr3 (56-199)||(11610911-11611053)
chr3 (76-155)||(53794780-53794859)
chr3 (81-199)||(13495315-13495433)
chr3 (96-197)||(14847041-14847140)
chr3 (62-147)||(46845531-46845616)
chr3 (115-186)||(23320125-23320196)
chr3 (56-186)||(32321776-32321903)
chr3 (77-155)||(2571286-2571363)
chr3 (77-155)||(12515557-12515634)
chr3 (101-193)||(30472935-30473028)
chr3 (122-186)||(7940854-7940918)
chr3 (77-145)||(51339276-51339344)
chr3 (77-145)||(51618067-51618135)
chr3 (80-151)||(9710964-9711035)
chr3 (117-176)||(23638111-23638170)
chr3 (77-155)||(10307784-10307861)
chr3 (76-142)||(53718322-53718388)
chr3 (80-186)||(54527758-54527864)
chr3 (77-146)||(20938074-20938143)
chr3 (77-150)||(24569325-24569398)
chr3 (101-154)||(53537075-53537128)
chr3 (110-186)||(23803098-23803174)
chr3 (115-155)||(33474556-33474596)
chr3 (77-152)||(47386939-47387015)
chr3 (79-199)||(50364210-50364329)
chr3 (115-186)||(1569242-1569313)
chr3 (117-176)||(7220173-7220232)
chr3 (47-146)||(37444134-37444232)
chr3 (123-186)||(51567869-51567932)
chr3 (117-155)||(35414892-35414930)
chr3 (110-200)||(54320719-54320807)
chr3 (77-176)||(2379134-2379230)
chr3 (56-145)||(3863326-3863415)
chr3 (115-147)||(3214977-3215009)
chr3 (128-176)||(26486439-26486487)
chr3 (80-176)||(38389467-38389563)
chr3 (119-155)||(39248510-39248546)
[»] scaffold0305 (2 HSPs)
scaffold0305 (81-193)||(18041-18153)
scaffold0305 (115-182)||(17844-17911)
[»] chr5 (26 HSPs)
chr5 (77-187)||(39990088-39990198)
chr5 (56-199)||(2795520-2795662)
chr5 (77-175)||(28629896-28629993)
chr5 (115-184)||(40166337-40166406)
chr5 (56-155)||(11636728-11636827)
chr5 (56-155)||(36597576-36597674)
chr5 (51-153)||(11250042-11250143)
chr5 (77-155)||(30839799-30839876)
chr5 (82-199)||(35469575-35469693)
chr5 (62-146)||(9184210-9184294)
chr5 (77-145)||(11375977-11376045)
chr5 (118-186)||(15241002-15241070)
chr5 (110-153)||(11264644-11264687)
chr5 (115-186)||(15837330-15837401)
chr5 (77-168)||(40512969-40513059)
chr5 (77-199)||(8103619-8103740)
chr5 (120-186)||(26265096-26265162)
chr5 (115-176)||(18150469-18150530)
chr5 (87-155)||(6863584-6863651)
chr5 (71-187)||(10665016-10665131)
chr5 (56-155)||(5958206-5958305)
chr5 (80-155)||(18841788-18841863)
chr5 (97-187)||(38994126-38994216)
chr5 (122-155)||(1203103-1203136)
chr5 (115-167)||(15820281-15820333)
chr5 (94-146)||(31567583-31567635)
[»] scaffold0061 (1 HSPs)
scaffold0061 (77-199)||(52818-52939)
[»] scaffold0017 (1 HSPs)
scaffold0017 (77-199)||(145695-145816)
[»] scaffold0727 (1 HSPs)
scaffold0727 (77-146)||(5708-5778)
[»] scaffold0149 (1 HSPs)
scaffold0149 (115-155)||(22519-22559)
[»] scaffold0111 (2 HSPs)
scaffold0111 (77-139)||(40997-41059)
scaffold0111 (80-176)||(37176-37272)


Alignment Details
Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 31039645 - 31039881
Alignment:
Q  1 atgctagctagaaagaaacccgcaagattgatatataggtgtttagaaataaaacaaggggttgtttaatatgtctaatattgcacatgttaaagtaatt 100  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| |||||||||||||    
T  31039645 atgctagccagaaagaaaccggcaagattgatatataggtgtttagaaataaaacaaggggttgtctaacatgtttaatattgcacgtgttaaagtaatt 31039744  T
Q  101 aaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaacatactactttaat 200  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  31039745 aaaaatagtaactatttattgaaaaacaaaaattatttattaaaaagttatatttataatagaaaatacacaagttacaatacaaacatactactttaat 31039844  T
Q  201 gaaaaatagacatgatagaaaacccataaaacagtga 237  Q
    |||||||| ||||||||||||||||||||||||||||    
T  31039845 gaaaaatacacatgatagaaaacccataaaacagtga 31039881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 186
Target Start/End: Complemental strand, 8977627 - 8977518
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||||| | || ||||| |||||||  || |||||||||||||||| ||||||| |||||||| |||| | ||| ||||| ||||||||    
T  8977627 aatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatatttaatataaaatgcacaagtt 8977528  T
Q  177 acaatacaaa 186  Q
    ||||||||||    
T  8977527 acaatacaaa 8977518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 155
Target Start/End: Original strand, 29730294 - 29730373
Alignment:
Q  76 taatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||| |||||||||  ||||||| ||  || | ||||||||||||||||| |||||||||||||||||||||||    
T  29730294 taatattgcatatgttaaagctattaaaattaataagtttttattgaaaaacaacagttatttattaaaaagttatatat 29730373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 14228286 - 14228209
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||||| |||||||||| |||||| | ||||||| ||| |||||||||||||  ||||||||||||||    
T  14228286 aatattgcacatgttaaggtaattaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatat 14228209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 28943929 - 28943852
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||||| |||||||||| |||||| | ||||||| ||| |||||||||||||  ||||||||||||||    
T  28943929 aatattgcacatgttaaggtaattaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatat 28943852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 29863484 - 29863386
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatata 154  Q
    ||||| |||| ||| ||||  ||||||||||||||||||| || ||||||||| |||| |  ||||||||| || ||||||||||||||||||| ||||    
T  29863484 aagggtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaataattatttattaaaaagttttata 29863386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 155
Target Start/End: Complemental strand, 3485760 - 3485681
Alignment:
Q  76 taatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||| || ||||||||| || ||||| ||||| || ||||||||||||||| ||| | |||||||||||||||||||    
T  3485760 taatattacatatgttaaaggaactaaaattagcacctttttattgaaaaacaataatcaattattaaaaagttatatat 3485681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 155
Target Start/End: Original strand, 33017721 - 33017819
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  ||||||||||||||||| |||| ||||| |||||| | |||||| |||| |||||||||||||  ||||||||||||||    
T  33017721 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaattagcaagtttttatt-aaaaccaacaattatttaacaaaaagttatatat 33017819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 176
Target Start/End: Original strand, 10887027 - 10887145
Alignment:
Q  58 ggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatat 157  Q
    |||||||| ||| ||||  || ||||||||||||||  ||  ||||| ||| || | ||||||||||||||| | ||||||||||||||| || |||| |    
T  10887027 ggggttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatattt 10887126  T
Q  158 gatagaaaatacacaagtt 176  Q
     ||| ||||||||||||||    
T  10887127 aatataaaatacacaagtt 10887145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 176
Target Start/End: Complemental strand, 22974731 - 22974635
Alignment:
Q  79 tattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||| |||| ||||| ||| |||| || |||||||| ||||||||||| ||| |||||||| |||| | ||| |||| |||||||||    
T  22974731 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagttacatatttaatataaaaaacacaagtt 22974635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 176
Target Start/End: Original strand, 23813670 - 23813766
Alignment:
Q  79 tattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||| |||| ||||| ||| |||| || |||||||| ||||||||||| ||| |||||||| |||| | ||| |||| |||||||||    
T  23813670 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagttacatatttaatataaaaaacacaagtt 23813766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 186
Target Start/End: Complemental strand, 30591320 - 30591215
Alignment:
Q  81 ttgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaa 180  Q
    ||||||||||||| | || ||||  ||| || | ||||||||||||  |||||||||||| ||||||||||| || | ||| |||||| |||||||||||    
T  30591320 ttgcacatgttaacgcaactaaatgtagtaagtttttattgaaaaaatacaattatttatcaaaaagttatacatttaatacaaaatatacaagttacaa 30591221  T
Q  181 tacaaa 186  Q
    | ||||    
T  30591220 tgcaaa 30591215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 2830839 - 2830773
Alignment:
Q  79 tattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaa 145  Q
    ||||||||||||||| |||| ||||| ||| |||| || |||||||| ||||||||||| |||||||    
T  2830839 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaa 2830773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 30623350 - 30623452
Alignment:
Q  84 cacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatac 183  Q
    |||||||||||  || ||| | ||| |||| ||| ||||||||||||||||||||||| ||||||| ||||| | |||  ||||  ||||||| ||||||    
T  30623350 cacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaagttttatatttaatatcaaatgtacaagtttcaatac 30623449  T
Q  184 aaa 186  Q
    |||    
T  30623450 aaa 30623452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 5363053 - 5362985
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaa 145  Q
    ||||||||||||||||| |||| ||||| ||| |||| || |||||||| |||||||| || |||||||    
T  5363053 aatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaaa 5362985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 6016896 - 6016972
Alignment:
Q  100 taaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||| ||| |||| || |||||||||||||| |||||| |||||||||||||||| | |||  |||| ||||||||    
T  6016896 taaaagtagtaacttttcattgaaaaacaacacttattttttaaaaagttatatatttaatatgaaatgcacaagtt 6016972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 17154639 - 17154750
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaa-ctatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagt 175  Q
    ||||||| ||||||||||| |||||||| ||  ||  | ||||||||||||||| ||| | |||||||||| ||||| || | ||| | |||||||||||    
T  17154639 aatattgtacatgttaaagaaattaaaagtattaatttttttattgaaaaacaataatcaattattaaaaaattatacatttaatatagaatacacaagt 17154738  T
Q  176 tacaatacaaac 187  Q
    | ||| ||||||    
T  17154739 ttcaaaacaaac 17154750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 155
Target Start/End: Complemental strand, 18332846 - 18332771
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||  ||  ||||| ||| || | ||||||||||||||| | ||||||||||||||| |||||||    
T  18332846 attgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctatatat 18332771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 31069738 - 31069675
Alignment:
Q  81 ttgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaa 144  Q
    ||||||||||||| |||| ||||| ||| || | ||||||||||| ||||||||||| ||||||    
T  31069738 ttgcacatgttaaggtaactaaaagtagtaagtttttattgaaaaccaacaattattgattaaa 31069675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 1017939 - 1017817
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    |||| |||||||| | || ||| ||||| ||| |||| ||  ||||||| |||||||||||||||||||| ||| |||| | ||| ||||| ||||| ||    
T  1017939 aatactgcacatgattaaataactaaaagtagtaacttttcgttgaaaaccaacaattatttattaaaaatttacatatttaatataaaatgcacaactt 1017840  T
Q  177 acaatacaaacatactactttaa 199  Q
     |||  ||||  |||||||||||    
T  1017839 tcaagtcaaagttactactttaa 1017817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 17552747 - 17552670
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||||| |||| ||||| |||||| | ||||| | ||| |||||||||||||  ||||| ||||||||    
T  17552747 aatattgcacatgttaaggtaactaaaagtagcaagtttttatcg-aaaccaacaattatttaacaaaaaattatatat 17552670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 30708024 - 30708108
Alignment:
Q  92 aaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtta 177  Q
    ||||||| |||||||| ||| | ||||||  ||||||||||||||  ||||||||||||||||| | ||| |||||| | ||||||    
T  30708024 aaagtaactaaaaatatcaagt-tttatttgaaaacaacaattatccattaaaaagttatatatttaataaaaaatatataagtta 30708108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 33987244 - 33987304
Alignment:
Q  97 aattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatat 157  Q
    |||||||| |||||| | |||||| |||||||||||| | |||||| ||| ||||||||||    
T  33987244 aattaaaactagcaattttttatttaaaaacaacaatcaattattagaaaattatatatat 33987304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 8e-42; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 9450274 - 9450396
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    |||||||||||| |||||||| |||||||||  ||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||| ||    
T  9450274 aatattgcacatcttaaagtagttaaaaataaaaactatttattgaaaaacaacaattatttattaaaaaattatatatttaatagaaaatacacaaatt 9450373  T
Q  177 acaatacaaacatactactttaa 199  Q
     ||||||||||||||||||||||    
T  9450374 ccaatacaaacatactactttaa 9450396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 20566178 - 20566056
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||| ||| | ||| ||||||||||||||    
T  20566178 aatattgcacatgttaaagtaactaaaaatagcaactatttattgaaaaacaacaattatttattaaaatattatctatttaataaaaaatacacaagtt 20566079  T
Q  177 acaatacaaacatactactttaa 199  Q
     ||||||||||||| ||||||||    
T  20566078 ccaatacaaacataatactttaa 20566056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 34817561 - 34817676
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaata-cacaagt 175  Q
    |||||||||| | ||||| ||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| | ||| |||| | |||||||    
T  34817561 aatattgcacgtattaaaataactaaaaatatcaactatttattgaaaa-caacaattatttattaaaaagttatatatttaataaaaaaaagcacaagt 34817659  T
Q  176 tacaatacaaacatact 192  Q
    | |||||| ||||||||    
T  34817660 tccaataccaacatact 34817676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 15411783 - 15411661
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    |||||||||||||||||||||| ||||| ||| || | ||||||||||||||||||| ||||||||||||| || |||| | ||| |||||  |||||||    
T  15411783 aatattgcacatgttaaagtaactaaaagtagtaattttttattgaaaaacaacaataatttattaaaaagctacatatttaatataaaatgaacaagtt 15411684  T
Q  177 acaatacaaacatactactttaa 199  Q
     ||| |||||  ||||| |||||    
T  15411683 tcaagacaaagttactattttaa 15411661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 185
Target Start/End: Original strand, 23932582 - 23932690
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||||||| || ||||||||| |||| |  ||||||||| |||||||||||||||||||||| ||||  | ||| ||||| ||||||||    
T  23932582 aatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatagttaatataaaatgcacaagtt 23932681  T
Q  177 acaatacaa 185  Q
     | ||||||    
T  23932682 ccgatacaa 23932690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 34214132 - 34214034
Alignment:
Q  57 aggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||| |||| ||| |||| ||||| |||||||||||||| || ||||||||| || | ||||||||||| ||||||||||||  |||||||||||||||    
T  34214132 agggtttgtctaacatgtataatactgcacatgttaaagcaactaaaaatagtaagtttttattgaaaaccaacaattattttataaaaagttatatat 34214034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 25998161 - 25998093
Alignment:
Q  79 tattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaag 147  Q
    |||||||||||||||||||| ||||| |   |||| |||||||||||||||||||||||||||||||||    
T  25998161 tattgcacatgttaaagtaactaaaagtgaaaactttttattgaaaaacaacaattatttattaaaaag 25998093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 199
Target Start/End: Original strand, 19228422 - 19228564
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  ||||||||||||||||| |||| ||||| ||| |||| || |||||||| ||||||||||| ||| |||||||| ||||    
T  19228422 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgatt-aaaagttacatat 19228520  T
Q  156 atgatagaaaatacacaagttacaatacaaacatactactttaa 199  Q
     | ||| |||| ||||||||| |||  ||||  |||||||||||    
T  19228521 ttaatacaaaaaacacaagttccaagtcaaagttactactttaa 19228564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 147
Target Start/End: Complemental strand, 43388948 - 43388857
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaag 147  Q
    ||||| |||| ||||||||  |||||||||||| |||||| || ||||| ||| || | ||||||||||| |||||||||||||||||||||    
T  43388948 aagggtttgtctaatatgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaaaag 43388857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 14377442 - 14377563
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||||| | || ||||| ||| |||| ||||||||||| |||||||||||| || |||||||| |||| | ||| |||| |||||||||    
T  14377442 aatattgcacatgttaaggcaactaaaagtagtaactttttattgaaaaccaacaattatttgtt-aaaagttacatatttaatataaaaaacacaagtt 14377540  T
Q  177 acaatacaaacatactactttaa 199  Q
     |||  ||||  |||||||||||    
T  14377541 tcaagtcaaagttactactttaa 14377563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 16919314 - 16919193
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||||| |||| ||||| ||| |||| ||| ||||||| ||||||||||| ||| |||||||| |||| | ||| |||| |||||||||    
T  16919314 aatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattgatt-aaaagttacatatttaatataaaaaacacaagtt 16919216  T
Q  177 acaatacaaacatactactttaa 199  Q
     |||  ||||  |||||||||||    
T  16919215 tcaagtcaaagttactactttaa 16919193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 27665204 - 27665083
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||||| | || ||||| ||| |||| || |||||||| ||||||||||||||| |||||||| |||| | ||| |||| |||||||||    
T  27665204 aatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttacatatttaatataaaaaacacaagtt 27665106  T
Q  177 acaatacaaacatactactttaa 199  Q
     |||  ||||  |||||||||||    
T  27665105 ccaagtcaaagttactactttaa 27665083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 40562238 - 40562160
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||| ||||||||||||| ||||||  || || | ||||||||||| |||||||||||||||||| ||||||||||    
T  40562238 aatattgtacatgttaaagtagttaaaagcagtaagtttttattgaaaatcaacaattatttattaaagagttatatat 40562160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 145
Target Start/End: Original strand, 12016663 - 12016752
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaa 145  Q
    ||||| |||| ||| ||||  ||||||||||||||||| |||| ||||| ||| |||| ||||||||||| ||||||||||| |||||||    
T  12016663 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaa 12016752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 168
Target Start/End: Original strand, 2051630 - 2051722
Alignment:
Q  76 taatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaata 168  Q
    |||||||| | ||||||||  || ||||| |||||| | |||||||||||||||||||||||||||||||| ||| |||| | ||| ||||||    
T  2051630 taatattgtatatgttaaaacaactaaaattagcaagtttttattgaaaaacaacaattatttattaaaaatttaaatatttaatataaaata 2051722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 199
Target Start/End: Original strand, 9747341 - 9747456
Alignment:
Q  84 cacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatac 183  Q
    ||||||||||| ||| ||||| ||| ||||||||||||||||||||||| ||||| | |||||| || |||| | ||| |||||  ||||||| ||| ||    
T  9747341 cacatgttaaattaactaaaagtagtaactatttattgaaaaacaacaactatttgtaaaaaagctacatatttaatataaaatgaacaagttccaagac 9747440  T
Q  184 aaacatactactttaa 199  Q
    |||  ||||| |||||    
T  9747441 aaaattactattttaa 9747456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 5583718 - 5583641
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||||| |||| ||||| |||||| | ||||||| ||| |||||||||||||  ||||||||||||||    
T  5583718 aatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatat 5583641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 43806380 - 43806486
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttaca 179  Q
    |||||||||||||||  |||||| | ||| |||| ||| ||| ||||||||||||||||||| ||||||| ||||| | |||  ||||  ||||||| ||    
T  43806380 attgcacatgttaaaacaattaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatgtacaagtttca 43806479  T
Q  180 atacaaa 186  Q
    |||||||    
T  43806480 atacaaa 43806486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 39904208 - 39904140
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaa 145  Q
    ||||||||||||||||| |||| ||||| ||| |||| || |||||||| ||||||||||| |||||||    
T  39904208 aatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaa 39904140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 186
Target Start/End: Complemental strand, 11661065 - 11660971
Alignment:
Q  91 taaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaa 186  Q
    ||||| || ||||| |||||| | ||||||||| || ||||||||||||||||||||||||| || | ||| |||||| ||||||| |||| ||||    
T  11661065 taaagcaactaaaagtagcaaatttttattgaataa-aacaattatttattaaaaagttatacatttaatacaaaatatacaagttccaatgcaaa 11660971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 145
Target Start/End: Complemental strand, 16126746 - 16126651
Alignment:
Q  50 taaaacaaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaa 145  Q
    ||||| ||||| |||| ||| ||||  ||||||||||||||||| |||| ||||| ||| || | || |||||||| ||||||||||| |||||||    
T  16126746 taaaaaaagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa 16126651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 176
Target Start/End: Original strand, 22705472 - 22705570
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||||| |||| ||||| ||| |||| || |||||||| ||||||||||| |||  ||||||| |||| | ||| |||| |||||||||    
T  22705472 aatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattaatt-taaagttacatatttaatataaaaaacacaagtt 22705570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 5853622 - 5853546
Alignment:
Q  81 ttgcacatgttaaagtaattaaaaatagcaactattt--attgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||| |||||||| |||  | | |||  |||||||||||||||||||||||| |||| ||||||||    
T  5853622 ttgcacatgttaaagcaattaaaagtagttagtgtttttattgaaaaacaacaattatttatttaaaaattatatat 5853546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 7720135 - 7720204
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagtt 149  Q
    |||||||||||||||  || ||| | ||| |||| ||| ||||||||||||||||||||||| |||||||    
T  7720135 attgcacatgttaaaacaactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagtt 7720204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 16493691 - 16493615
Alignment:
Q  81 ttgcacatgttaaagtaattaaaaatagcaactattt--attgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||| |||||||| |||  | | |||  |||||||||||||||||||||||| |||| ||||||||    
T  16493691 ttgcacatgttaaagcaattaaaagtagttaatgtttttattgaaaaacaacaattatttatttaaaaattatatat 16493615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 22704556 - 22704632
Alignment:
Q  81 ttgcacatgttaaagtaattaaaaatagcaactattt--attgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||| |||||||| |||  | | |||  |||||||||||||||||||||||| |||| ||||||||    
T  22704556 ttgcacatgttaaagcaattaaaagtagttagtgtttttattgaaaaacaacaattatttatttaaaaattatatat 22704632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 24729725 - 24729664
Alignment:
Q  90 ttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttat 151  Q
    ||||||||| ||||||||| || | |||||||||||  || |||||||||||||||||||||    
T  24729725 ttaaagtaactaaaaatagtaaatttttattgaaaataaataattatttattaaaaagttat 24729664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 25948058 - 25948134
Alignment:
Q  81 ttgcacatgttaaagtaattaaaaatagcaac--tatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||| |||||||| |||  |   | ||||||||||||||||||||||||||| |||| ||||||||    
T  25948058 ttgcacatgttaaagcaattaaaagtagttagcgtttttattgaaaaacaacaattatttatttaaaaattatatat 25948134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 45062225 - 45062314
Alignment:
Q  87 atgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||  |||||||| | | |||| |||||| |||||||| |||||||||||||||||||| || | | ||| ||||| ||||||||    
T  45062225 atgttaaaacaattaaaagtggtaactttttattaaaaaacaaaaattatttattaaaaagttacatgtttaatataaaatgcacaagtt 45062314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 155
Target Start/End: Complemental strand, 38248580 - 38248503
Alignment:
Q  76 taatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||||||||||| |||| | |||||||||| | |||||| |||| |||||||||||||  ||||| ||||||||    
T  38248580 taatattgcacatgttaaggtaact-aaaatagcaagtttttatt-aaaaccaacaattatttaacaaaaaattatatat 38248503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 155
Target Start/End: Complemental strand, 40503135 - 40503064
Alignment:
Q  84 cacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||||  |||||||| || ||| | ||||||||||| |||||||||||||  ||||||||||||||    
T  40503135 cacatattaaaacaattaaaagtaacaagtttttattgaaaaccaacaattatttaacaaaaagttatatat 40503064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 29795054 - 29795112
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaacta 114  Q
    ||||| |||| ||| ||||  |||||||||||| ||||||||| |||||||||||||||    
T  29795054 aagggtttgtctaacatgtgcaatattgcacatattaaagtaactaaaaatagcaacta 29795112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 2544320 - 2544255
Alignment:
Q  128 aacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaacatacta 193  Q
    ||||||||||||||||||| ||||| ||   ||| ||||||||||||||  ||||||||| |||||    
T  2544320 aacaattatttattaaaaaattatacattaaatataaaatacacaagttttaatacaaacttacta 2544255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 14285435 - 14285371
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttatta 142  Q
    ||||||||| ||||||||||||| |||| ||| || | |||||||||| | |||||||||||||||    
T  14285435 aatattgcagatgttaaagtaat-aaaagtagaaattttttattgaaataaaacaattatttatta 14285371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 15231886 - 15231947
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||| | |||||||||||||||||| |||| | |||  |||| ||||||||    
T  15231886 tttattgaaaaacaaaacttatttattaaaaagttacatatttaatatgaaatgcacaagtt 15231947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 146
Target Start/End: Complemental strand, 22162237 - 22162169
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaa 146  Q
    ||||||||||||||||| | || ||||| ||| |||| ||||||| ||| ||||||||| ||||||||||    
T  22162237 aatattgcacatgttaaggcaactaaaagtagtaactttttattg-aaaccaacaattaattattaaaaa 22162169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 145
Target Start/End: Complemental strand, 26230034 - 26229946
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaa 145  Q
    ||||| |||| ||| ||||  ||||||||||||||||| |||| ||||| ||| || | |||||| |||| ||||||||||| |||||||    
T  26230034 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaattttttatt-aaaaccaacaattattgattaaaa 26229946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 38327858 - 38327895
Alignment:
Q  110 aactatttattgaaaaacaacaattatttattaaaaag 147  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  38327858 aactttttattgaaaatcaacaattatttattaaaaag 38327895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 25068600 - 25068561
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||||| ||||||||||||||||||| ||||||||    
T  25068600 tttattgaaaaa-aacaattatttattaaaaaattatatat 25068561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 35729188 - 35729256
Alignment:
Q  131 aattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaacatactactttaa 199  Q
    |||||||||||||||| |||||||| |  || |||||||||||||| ||||| |||  | |||||||||    
T  35729188 aattatttattaaaaatttatatatttactataaaatacacaagttccaatataaatttgctactttaa 35729256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 39367114 - 39367150
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagttat 151  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  39367114 tttattgaaaatcaataattatttattaaaaagttat 39367150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 199
Target Start/End: Complemental strand, 16692 - 16574
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttaca 179  Q
    |||||| |||||||||||| |||||   |||||||||||||| |||||||||||||||||||||||| |||||||| | |||||||||||||||||| ||    
T  16692 attgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaatttatatat-taatagaaaatacacaagttcca 16594  T
Q  180 atacaaacatactactttaa 199  Q
    |  |||||||| ||||||||    
T  16593 aatcaaacatattactttaa 16574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 199
Target Start/End: Original strand, 12132003 - 12132122
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttaca 179  Q
    |||||||||||||||| || ||||| |||||||| ||||||||||||| |||| |||||||||||||||||||||| | ||| |||||   |||||| ||    
T  12132003 attgcacatgttaaagaaactaaaagtagcaactttttattgaaaaaccacaagtatttattaaaaagttatatatttaatataaaatgttcaagttcca 12132102  T
Q  180 atacaaacatactactttaa 199  Q
    |||||||| |||||||||||    
T  12132103 atacaaacttactactttaa 12132122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 5573312 - 5573384
Alignment:
Q  84 cacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatata 156  Q
    ||||||||||| ||| |||||||| ||| | ||||||||||||||||||| ||||||||||||||||||||||    
T  5573312 cacatgttaaaataactaaaaataacaagtttttattgaaaaacaacaatcatttattaaaaagttatatata 5573384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 7393363 - 7393296
Alignment:
Q  119 ttgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaa 186  Q
    |||||||||| |||||||||||||||||||||||||| | ||| |||||||||||||||||| |||||    
T  7393363 ttgaaaaacaccaattatttattaaaaagttatatatttaatataaaatacacaagttacaagacaaa 7393296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 176
Target Start/End: Complemental strand, 14816307 - 14816188
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  ||||||||||||||||||| || ||||| ||| |||| ||||||||||| ||||||||| |||||||||| ||| ||||    
T  14816307 aagggtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatat 14816208  T
Q  156 atgatagaaaatacacaagtt 176  Q
     | |||  |||||||||||||    
T  14816207 ttaata-taaatacacaagtt 14816188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 176
Target Start/End: Original strand, 14829433 - 14829552
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  ||||||||||||||||||| || ||||| ||| |||| ||||||||||| ||||||||| |||||||||| ||| ||||    
T  14829433 aagggtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatat 14829532  T
Q  156 atgatagaaaatacacaagtt 176  Q
     | |||  |||||||||||||    
T  14829533 ttaata-taaatacacaagtt 14829552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 35678435 - 35678314
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||||||| || ||||| ||| |||| || |||||||| ||||||||| |||||||||| ||| |||| | |||  |||||||||||||    
T  35678435 aatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaata-taaatacacaagtt 35678337  T
Q  177 acaatacaaacatactactttaa 199  Q
     |||  ||||  |||||||||||    
T  35678336 tcaagtcaaagttactactttaa 35678314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 6818013 - 6818142
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  ||||||| | ||||||||| || ||||||||| |||| |  ||||||||| |||||||||||||||||||||| ||||     
T  6818013 aagggtttgtctaacatgtgcaatattgtatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatag 6818112  T
Q  156 atgatagaaaatacacaagttacaatacaa 185  Q
     | ||| ||||| |||||||| | ||||||    
T  6818113 ttaatataaaatgcacaagttccgatacaa 6818142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 146
Target Start/End: Complemental strand, 7140619 - 7140550
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaa 146  Q
    ||||||||||||||||| |||| ||||| ||| |||| ||||||||||| ||||||||||| ||||||||    
T  7140619 aatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaaa 7140550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 8284728 - 8284660
Alignment:
Q  79 tattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaag 147  Q
    ||||||||||||||||| || ||||| ||| |||| |||||| ||||| ||||||||||||||||||||    
T  8284728 tattgcacatgttaaagcaactaaaagtagtaactttttattaaaaaagaacaattatttattaaaaag 8284660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 156
Target Start/End: Complemental strand, 13496893 - 13496813
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaa-tagcaactatttattgaaaaacaacaattatttattaaaaagttatatata 156  Q
    ||||||||||||||||||| || |||||| ||| |||| |  ||||||||| |||||||||||||||||||||| ||||||    
T  13496893 aatattgcacatgttaaaggaactaaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatata 13496813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 155
Target Start/End: Original strand, 2161384 - 2161482
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  ||||||||||||||||| |||| ||||| |||||| | ||||||| ||| |||||||||||||  ||||||||||||||    
T  2161384 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatat 2161482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 167
Target Start/End: Complemental strand, 3306236 - 3306126
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  ||||||||||||||||| |||| ||||| ||| || | ||||||||||  |||||||||||||  ||||||||||||||    
T  3306236 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaac-caacaattatttaacaaaaagttatatat 3306138  T
Q  156 atgatagaaaat 167  Q
     ||||| |||||    
T  3306137 ttgatacaaaat 3306126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 155
Target Start/End: Complemental strand, 44222595 - 44222517
Alignment:
Q  76 taatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||||||||||||| || ||||| || || || |||||| |||||||||||||||||||||||||  |||||||    
T  44222595 taatattgcacatgttaaagcaactaaaactaacatctttttatt-aaaaacaacaattatttattaaaaatgtatatat 44222517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 9801686 - 9801763
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||| |||| ||||||||||||||| ||| |||| || |||||||| ||||||||||| ||| |||||||||||||    
T  9801686 aatattgtacatattaaagtaattaaaagtagtaacttttcattgaaaatcaacaattattgatt-aaaagttatatat 9801763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 20514650 - 20514760
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||| ||||| || | ||| ||| || |  ||||||||||| | |||||||||||||||||||||||||| | ||| |||||  |||||||    
T  20514650 aatattgcacatggtaaagcaacttaaagtagtaatttcttattgaaaaataccaattatttattaaaaagttatatatttaatataaaatgtacaagtt 20514749  T
Q  177 acaatacaaac 187  Q
     ||| ||||||    
T  20514750 ccaagacaaac 20514760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 146
Target Start/End: Complemental strand, 33514661 - 33514592
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaa 146  Q
    ||||||||||||||||| | || ||||| |||||||  ||||||||||||||||||  ||||||||||||    
T  33514661 aatattgcacatgttaaggaaactaaaagtagcaaccttttattgaaaaacaacaaccatttattaaaaa 33514592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 9022099 - 9022177
Alignment:
Q  124 aaacaacaattatttattaaaaagttatatat---atgatagaaaatacacaagttacaatacaaacatactactttaa 199  Q
    |||||| |||||||||||||||||||||||||   || | | ||||| |||||||||||||||||| ||| ||||||||    
T  9022099 aaacaataattatttattaaaaagttatatatttaataaaaaaaaatgcacaagttacaatacaaatatattactttaa 9022177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 187
Target Start/End: Complemental strand, 34741802 - 34741716
Alignment:
Q  100 taaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaac 187  Q
    |||||||| ||||| || |||||||| ||| |||||||||||||||| |||||||| | ||| ||||| ||||||||  |||||||||    
T  34741802 taaaaataacaacttttaattgaaaa-caataattatttattaaaaaattatatatttaatataaaatgcacaagttctaatacaaac 34741716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 9824976 - 9825049
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagtta 150  Q
    ||||||| | ||||||| | |||||||| ||| |||| |||||||||||||| |||| |||||| |||||||||    
T  9824976 aatattgtatatgttaatgcaattaaaattagtaactttttattgaaaaacatcaataatttataaaaaagtta 9825049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 181
Target Start/End: Original strand, 35583383 - 35583487
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaact---atttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaa 173  Q
    ||||||||||||||||||  | |||||| || |||||   |||||||||||| |||||||||||| ||||||| |||||||| | ||| |||||||||||    
T  35583383 aatattgcacatgttaaaacatttaaaa-taacaacttttatttattgaaaa-caacaattatttgttaaaaa-ttatatatttaatacaaaatacacaa 35583479  T
Q  174 gttacaat 181  Q
    ||| ||||    
T  35583480 gtttcaat 35583487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 40226146 - 40226070
Alignment:
Q  81 ttgcacatgttaaagtaattaaaaatagcaactattt--attgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||| |||||||| |||  | | |||  |||||||||||||||||||||||| |||| ||||||||    
T  40226146 ttgcacatgttaaagcaattaaaagtagttagtgtttttattgaaaaacaacaattatttatttaaaaattatatat 40226070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 10129121 - 10129189
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaa 145  Q
    ||||||||||||||||| |||| ||||| ||| || | || |||||||| ||||||||||| |||||||    
T  10129121 aatattgcacatgttaaggtaactaaaattagtaatttttcattgaaaaccaacaattattgattaaaa 10129189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 12346030 - 12346098
Alignment:
Q  84 cacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttata 152  Q
    |||||||||||  |||||| | ||| |||| ||| ||||||||||||||||||||||| |||| |||||    
T  12346030 cacatgttaaaacaattaatagtagtaactttttcttgaaaaacaacaattatttattcaaaacttata 12346098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 13328122 - 13328034
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaa 144  Q
    ||||| |||| ||| ||||  ||||||||| ||||||| |||| ||||| ||| |||| || |||||||| ||||||||||| ||||||    
T  13328122 aagggtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaa 13328034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 150
Target Start/End: Complemental strand, 26195530 - 26195495
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagtta 150  Q
    |||||||||||||| |||||||||||||||||||||    
T  26195530 tttattgaaaaacatcaattatttattaaaaagtta 26195495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 26364150 - 26364076
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttata 152  Q
    ||||||||||||||||| |||| ||||| ||| || | |||||| |||| |||||||||||||  |||||||||||    
T  26364150 aatattgcacatgttaaggtaactaaaagtagaaagtttttatt-aaaatcaacaattatttaacaaaaagttata 26364076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 26682085 - 26682207
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactattt-attgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagt 175  Q
    ||||||||||||||||||  || ||||| ||| || | ||| |||||||| ||||||||||||||||||||| || | || | ||| ||||| |||||||    
T  26682085 aatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaa-caacaattatttattaaaaagctacacatttaatataaaatgcacaagt 26682183  T
Q  176 tacaatacaaacatactactttaa 199  Q
    | |||  ||||  |||||||||||    
T  26682184 tccaagtcaaagttactactttaa 26682207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 155
Target Start/End: Complemental strand, 34869680 - 34869605
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||| |||||||  || ||| ||||| |||| ||| || |||||||||||||||||||| ||||||| |||||    
T  34869680 attgcacgtgttaaaacaactaataatagtaactttttcttcaaaaacaacaattatttattcaaaagttttatat 34869605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 37264521 - 37264592
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttat 151  Q
    |||||||||||||||  || ||||| ||| || |  |||||||||| ||| |||||||||||||||||||||    
T  37264521 attgcacatgttaaaacaactaaaagtagtaaattgttattgaaaatcaataattatttattaaaaagttat 37264592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 38843724 - 38843799
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||||||||  || ||| | ||| |||| ||| ||| ||||||||||||||||||| ||||||| |||||    
T  38843724 attgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatat 38843799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 45005990 - 45006065
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||||||||  || ||| | ||| |||| ||| ||| ||||||||||||||||||| ||||||| |||||    
T  45005990 attgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatat 45006065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 15868098 - 15868052
Alignment:
Q  100 taaaaatagcaactatttattgaaaaacaacaattatttattaaaaa 146  Q
    ||||| || ||||| ||||||||||||||||||||| ||||||||||    
T  15868098 taaaagtaacaactttttattgaaaaacaacaattacttattaaaaa 15868052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 34249735 - 34249805
Alignment:
Q  118 attgaaaaacaacaattatttattaaaaa-gttatatatatgatagaaaatacacaagttacaatacaaac 187  Q
    |||||||||||  |||||||||||||||| |||| |||| | ||| |||||||||||||| ||| ||||||    
T  34249735 attgaaaaacactaattatttattaaaaaagttaaatatttaatataaaatacacaagttccaagacaaac 34249805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 39701963 - 39701842
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||||| |||| ||||| ||| |||| ||  ||||||| ||||||||| | ||| |||||||| |||| | ||| |||| |||||| ||    
T  39701963 aatattgcacatgttaaggtaactaaaagtagtaacttttcgttgaaaaccaacaattactaatt-aaaagttacatatttaatataaaaaacacaaatt 39701865  T
Q  177 acaatacaaacatactactttaa 199  Q
     |||  ||||  |||||||||||    
T  39701864 tcaagtcaaagttactactttaa 39701842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 4080569 - 4080476
Alignment:
Q  62 ttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||| ||| |||| |||||||||||||||||| | || ||||| ||| |||| || ||||||||  |||||||| ||| |||||| ||| ||||    
T  4080569 ttgtctaacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatat 4080476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 4084718 - 4084625
Alignment:
Q  62 ttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||| ||| |||| |||||||||||||||||| | || ||||| ||| |||| || ||||||||  |||||||| ||| |||||| ||| ||||    
T  4084718 ttgtctaacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatat 4084625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 155
Target Start/End: Complemental strand, 4103025 - 4102932
Alignment:
Q  62 ttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||| ||| |||| |||||||||||||||||| | || ||||| ||| |||| || ||||||||  |||||||| ||| |||||| ||| ||||    
T  4103025 ttgtctaacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatat 4102932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 38048090 - 38048029
Alignment:
Q  85 acatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaa 146  Q
    ||||| |||||||| ||||||||| |||| || ||| | ||||| |||||||||||||||||    
T  38048090 acatgctaaagtaactaaaaatagtaacttttcattcacaaacaccaattatttattaaaaa 38048029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 6850705 - 6850669
Alignment:
Q  110 aactatttattgaaaaacaacaattatttattaaaaa 146  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  6850705 aactttttattgaaaaacaacaattatttattcaaaa 6850669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 7750685 - 7750733
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaa 125  Q
    ||||||||||||||||||  || ||||| |||||||| |||||||||||    
T  7750685 aatattgcacatgttaaaacaactaaaagtagcaactttttattgaaaa 7750733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 9580285 - 9580201
Alignment:
Q  62 ttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaa 146  Q
    |||| ||||||||  || |||||||||||||||  || ||| | ||| |||| ||| ||| ||||||||||||||||||| ||||    
T  9580285 ttgtctaatatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaa 9580201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 9743917 - 9744000
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaacatactactttaa 199  Q
    ||||||||||| ||||||||||||||| |||||||| |||| | ||| |||| ||| ||||| |||  ||||  |||||||||||    
T  9743917 tttattgaaaaccaacaattatttatt-aaaagttacatatttaatataaaaaacataagttccaagtcaaagttactactttaa 9744000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 155
Target Start/End: Complemental strand, 10974705 - 10974637
Alignment:
Q  87 atgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||| || ||||| ||| |||  ||||||||||||||| || ||||||||||||| ||| ||||    
T  10974705 atgttaaagcaactaaaagtagtaacattttattgaaaaacaataactatttattaaaaaattacatat 10974637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 19343997 - 19343937
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatt 137  Q
    ||||||||||||||||| ||||  |||| ||| |||| || |||||||| |||||||||||    
T  19343997 aatattgcacatgttaaggtaaccaaaagtagtaacttttcattgaaaaccaacaattatt 19343937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 144
Target Start/End: Complemental strand, 40211002 - 40210914
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaa 144  Q
    ||||| |||| ||| ||||  ||||||||| ||||||| |||| ||||| ||  |||| || |||||||| ||||||||||| ||||||    
T  40211002 aagggtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtattaacttttcattgaaaaccaacaattattgattaaa 40210914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 4e-28; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 199
Target Start/End: Complemental strand, 7040409 - 7040291
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttaca 179  Q
    |||||| |||||||||||| |||||   |||||||||||||| |||||||||||||||||||||||| |||||||| | |||||||||||||||||| ||    
T  7040409 attgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaatttatatat-taatagaaaatacacaagttcca 7040311  T
Q  180 atacaaacatactactttaa 199  Q
    |  |||||||| ||||||||    
T  7040310 aatcaaacatagtactttaa 7040291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 193
Target Start/End: Complemental strand, 3530275 - 3530159
Alignment:
Q  76 taatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagt 175  Q
    |||||| ||||||||||||| |||||| ||||  || | ||||||||||| |||||||||||||||||||| |||||||| ||||| ||||| ||||| |    
T  3530275 taatatcgcacatgttaaagcaattaagaataataattttttattgaaaa-caacaattatttattaaaaaattatatatttgatataaaatgcacaaat 3530177  T
Q  176 tacaatacaaacatacta 193  Q
    | ||||| |||| |||||    
T  3530176 ttcaataaaaacttacta 3530159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 19868131 - 19868241
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    |||||||||||||||||   || ||||| ||| || | || ||||||||||| ||||||||||| |||||||||||||| | ||| ||||||||||||||    
T  19868131 aatattgcacatgttaagacaactaaaagtagtaaattttcattgaaaaacaccaattatttatcaaaaagttatatatttaatataaaatacacaagtt 19868230  T
Q  177 acaatacaaac 187  Q
     ||| ||||||    
T  19868231 tcaagacaaac 19868241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 155
Target Start/End: Complemental strand, 8091470 - 8091395
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||| |||| || ||||| |||||| | ||||||||||| ||| |||||||||||||||||||||||||    
T  8091470 attgcacatgtcaaagcaactaaaagtagcaaatttttattgaaaatcaataattatttattaaaaagttatatat 8091395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 199
Target Start/End: Original strand, 19889337 - 19889479
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  ||||||||||||||||| | || ||||| ||| |||| || |||||||| ||||||||||||||| |||||||| ||||    
T  19889337 aagggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttacatat 19889435  T
Q  156 atgatagaaaatacacaagttacaatacaaacatactactttaa 199  Q
     | ||| |||| ||||||||| |||  ||||  |||||||||||    
T  19889436 ttaatataaaaaacacaagttccaagtcaaagttactactttaa 19889479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 199
Target Start/End: Original strand, 33342985 - 33343127
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  ||||||||||||||||| |||| ||||| |||||| | ||||||| ||| |||||||||||||  ||||||||||||||    
T  33342985 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatat 33343083  T
Q  156 atgatagaaaatacacaagttacaatacaaacatactactttaa 199  Q
     | ||| |||||   |||||| |||||||||  ||||| |||||    
T  33343084 ttaatacaaaatgttcaagttccaatacaaagttactattttaa 33343127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 31066894 - 31066800
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttatta-aaaagttatatatatgatagaaaatacacaa 173  Q
    ||||||||||||||| ||| ||||| ||| |||| |||||| |||||||| || ||||||||| |||| |||||||| ||||| |||||||||||    
T  31066894 attgcacatgttaaaataagtaaaagtagtaactttttattaaaaaacaagaactatttattaaaaaaattatatatttgatataaaatacacaa 31066800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 39869140 - 39869218
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||||||| || ||||||||| |||| || |||||||| ||||||||| |||||||||| ||| ||||    
T  39869140 aatattgcacatgttaaagaaactaaaaatagtaacttttcattgaaaaccaacaattaattattaaaaatttacatat 39869218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 2276733 - 2276806
Alignment:
Q  118 attgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaacatac 191  Q
    ||||||||||| |||||||||||||||||||||| ||| | ||| |||||||||||||| ||| |||| |||||    
T  2276733 attgaaaaacaccaattatttattaaaaagttatctatttaatataaaatacacaagtttcaacacaagcatac 2276806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 155
Target Start/End: Complemental strand, 11680176 - 11680101
Alignment:
Q  82 tgcacatgttaaagtaattaaaaatagcaactattt--attgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||| || | || ||| |||||||||| |||  ||||||||||||||||||||||||||||||||||||||    
T  11680176 tgcacatgtaaaggcaaataagaatagcaacttttttaattgaaaaacaacaattatttattaaaaagttatatat 11680101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 42750291 - 42750378
Alignment:
Q  62 ttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagtta 150  Q
    |||||||| ||||  ||||||||| ||||||||| || ||||||||  |||| ||||||| ||||||| ||||||||||||||||||||    
T  42750291 ttgtttaacatgtgcaatattgcatatgttaaagcaactaaaaataataactttttattg-aaaacaataattatttattaaaaagtta 42750378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 9331952 - 9332046
Alignment:
Q  50 taaaacaaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaa 144  Q
    ||||| ||||| |||| ||| ||||  ||||||||||||||||| |||| ||||| ||| |||| || |||||||| ||||||||||| ||||||    
T  9331952 taaaaaaagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaa 9332046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 176
Target Start/End: Complemental strand, 12086106 - 12085993
Alignment:
Q  62 ttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgata 161  Q
    |||| ||| |||| |||||||||||||||||| | || ||||| ||| |||| ||  ||||||| ||||||||||||||| |||||||| |||| | |||    
T  12086106 ttgtctaacatgtgtaatattgcacatgttaaggcaactaaaagtagtaacttttcgttgaaaatcaacaattatttatt-aaaagttaaatatttaata 12086008  T
Q  162 gaaaatacacaagtt 176  Q
     |||| |||||||||    
T  12086007 taaaaaacacaagtt 12085993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 38554263 - 38554333
Alignment:
Q  85 acatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||| ||| ||||||| | || | |||||||||||||||||||||| ||||||||| ||||||||    
T  38554263 acatgttaaactaactaaaaatcgtaaatttttattgaaaaacaacaattatatattaaaaatttatatat 38554333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 24639564 - 24639628
Alignment:
Q  82 tgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaa 146  Q
    ||||||||||||||||||||||||| | |  | |||||||| |||||||||||||| ||||||||    
T  24639564 tgcacatgttaaagtaattaaaaatggaatttttttattgacaaacaacaattattcattaaaaa 24639628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 47708007 - 47707967
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  47708007 tttatggaaaaacaacaattatttattaaaaagttatatat 47707967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 199
Target Start/End: Original strand, 7169999 - 7170141
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  ||||||||||||||||| | || ||||||||| |||| ||||||| ||| ||||||||| ||||||||||  || |||     
T  7169999 aagggattgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattg-aaaccaacaattaattattaaaaatctacataa 7170097  T
Q  156 atgatagaaaatacacaagttacaatacaaacatactactttaa 199  Q
     | ||| ||||| |||||||| |||  ||||  |||||||||||    
T  7170098 ttaatataaaatgcacaagttccaagtcaaagttactactttaa 7170141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 36991116 - 36991041
Alignment:
Q  122 aaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaacatactacttt 197  Q
    ||||| ||||| ||||||||||||||| |||||| | ||||||||||||||||||    |||||| ||||||||||    
T  36991116 aaaaataacaactatttattaaaaagtcatatatttaatagaaaatacacaagttttgctacaaatatactacttt 36991041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 46290031 - 46290105
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||||||| |||| ||||| |||||| | ||||||| ||| |||||||||||||  ||||||||||||||    
T  46290031 attgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatat 46290105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 5909442 - 5909321
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||||| | || |||||  || |||| || |||||||| ||||||||||||||| ||||| || |||| | ||| |||| |||||||||    
T  5909442 aatattgcacatgttaaggcaactaaaagcagtaacttttcattgaaaaccaacaattatttatt-aaaagctacatatttaatataaaaaacacaagtt 5909344  T
Q  177 acaatacaaacatactactttaa 199  Q
     |||  ||||  |||||||||||    
T  5909343 tcaagtcaaagttactactttaa 5909321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 199
Target Start/End: Complemental strand, 23982908 - 23982794
Alignment:
Q  85 acatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaataca 184  Q
    ||||||||| | || ||||| ||| |||| || ||| |||| ||||||||| |||||||||| ||| |||| | ||| |||||||||||||| |||  ||    
T  23982908 acatgttaaggcaactaaaagtagtaacttttcattcaaaaccaacaattaattattaaaaacttaaatatttaatataaaatacacaagttccaagtca 23982809  T
Q  185 aacatactactttaa 199  Q
    ||  |||||||||||    
T  23982808 aagttactactttaa 23982794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 25709560 - 25709490
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaag 147  Q
    ||||||||||||||||||  || ||||| ||| || | |||||||| |||||||||| |||||||||||||    
T  25709560 aatattgcacatgttaaatcaactaaaagtagtaattttttattgataaacaacaataatttattaaaaag 25709490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 45501479 - 45501585
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttaca 179  Q
    ||||||||||||||| ||| ||| | ||| |||| ||| || |||||||||||||||||||| || |||| ||||| | |||  ||||  ||||||| ||    
T  45501479 attgcacatgttaaaataactaatagtagtaactttttcttaaaaaacaacaattatttattcaacagttttatatttaatattaaatgtacaagttcca 45501578  T
Q  180 atacaaa 186  Q
    |||||||    
T  45501579 atacaaa 45501585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 7899606 - 7899537
Alignment:
Q  118 attgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaac 187  Q
    ||||||||||| |||| ||||||||||| ||||||||| | ||| |||||| |||||||| || ||||||    
T  7899606 attgaaaaacaccaataatttattaaaatgttatatatttaatataaaatatacaagttataagacaaac 7899537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 12624692 - 12624753
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    |||||||||||| | ||||||||||||||||| || ||||| | ||| ||||||||||||||    
T  12624692 tttattgaaaaatatcaattatttattaaaaacttgtatatttaatataaaatacacaagtt 12624753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 24699177 - 24699230
Alignment:
Q  102 aaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||| |||| || ||||||||||||||||||||||||| ||||||| ||||    
T  24699177 aaaatagtaacttttcattgaaaaacaacaattatttattataaagttacatat 24699230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 153
Target Start/End: Original strand, 12650838 - 12650914
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatat 153  Q
    ||||||| |||||||||   || ||||||||| |||| || ||||||||  | ||||||||||||||||||||||||    
T  12650838 aatattgtacatgttaagccaactaaaaatagtaacttttcattgaaaactaccaattatttattaaaaagttatat 12650914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 24250331 - 24250399
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaa 145  Q
    ||||||||||||||||| | || ||||| ||  |||| || |||||||| |||||||||||||||||||    
T  24250331 aatattgcacatgttaaggaaactaaaagtattaacttttcattgaaaaccaacaattatttattaaaa 24250399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 39757270 - 39757202
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaa 145  Q
    ||||||||||||||||| |||| ||||| ||| || | || |||||||| ||||||||||| |||||||    
T  39757270 aatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaatcaacaattattgattaaaa 39757202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 47201258 - 47201326
Alignment:
Q  84 cacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttata 152  Q
    |||||||||||| |||||||| |||||| | |||  | |||||||||||| | ||||||||||||||||    
T  47201258 cacatgttaaaggaattaaaagtagcaatttttttattaaaaacaacaatcaattattaaaaagttata 47201326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 16800636 - 16800578
Alignment:
Q  85 acatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaa 144  Q
    ||||||||||| ||| |||| || || || ||||||||||||||||||||||||||||||    
T  16800636 acatgttaaagaaat-aaaagtaacatctttttattgaaaaacaacaattatttattaaa 16800578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 36548620 - 36548553
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaa 144  Q
    ||||||||||||||||| | || ||||| ||| || | ||||||||||| ||||||||||| ||||||    
T  36548620 aatattgcacatgttaagggaactaaaagtagtaattttttattgaaaaccaacaattattgattaaa 36548553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 154
Target Start/End: Original strand, 38759975 - 38760042
Alignment:
Q  87 atgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatata 154  Q
    ||||||||  || ||| ||||| |||| ||| ||||||||||||||||||||||| ||||||| ||||    
T  38759975 atgttaaaacaactaataatagtaacttttttttgaaaaacaacaattatttattcaaaagttttata 38760042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 8420956 - 8420894
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtta 177  Q
    |||||| |||| || |||||||||||||||||||| ||||| | ||| |||| ||||||||||    
T  8420956 tttattaaaaagcatcaattatttattaaaaagttgtatatttaatataaaagacacaagtta 8420894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 145
Target Start/End: Complemental strand, 3562067 - 3561970
Alignment:
Q  48 aataaaacaaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaa 145  Q
    ||||||| ||||  |||| ||| ||||  ||||||||||||||||| |||| |||||  || |||| || |||||||| ||| ||||||| |||||||    
T  3562067 aataaaaaaaggatttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaaatcaataattattgattaaaa 3561970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 4e-28; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 199
Target Start/End: Original strand, 6307523 - 6307641
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttaca 179  Q
    |||||| |||||||||||| |||||   |||||||||||||| |||||||||||||||||||||||| |||||||| | |||||||||||||||||| ||    
T  6307523 attgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaatttatatat-taatagaaaatacacaagttcca 6307621  T
Q  180 atacaaacatactactttaa 199  Q
    |  |||||||| ||||||||    
T  6307622 aatcaaacatattactttaa 6307641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 36490796 - 36490874
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||||||| |||||||| ||| || | |||||||||||||||||||||||||||||||||||||||||    
T  36490796 aatattgcacatgttaaagcaattaaaagtagtaagtttttattgaaaaacaacaattatttattaaaaagttatatat 36490874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 186
Target Start/End: Complemental strand, 39627732 - 39627623
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    |||||| |||||||||| | || |||||||||||||| || |||||||||||||||| | ||||| |||||||| |||| | ||| ||||| ||||||||    
T  39627732 aatattacacatgttaaggaaactaaaaatagcaacttttaattgaaaaacaacaatcacttattgaaaagttacatatttaatataaaatgcacaagtt 39627633  T
Q  177 acaatacaaa 186  Q
    ||||||||||    
T  39627632 acaatacaaa 39627623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 11744985 - 11744917
Alignment:
Q  81 ttgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagtt 149  Q
    ||||||||||||||| |||||||| ||  |||| |||||||||||||||||||||||||||||||||||    
T  11744985 ttgcacatgttaaagaaattaaaagtataaactttttattgaaaaacaacaattatttattaaaaagtt 11744917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 199
Target Start/End: Original strand, 49392132 - 49392220
Alignment:
Q  109 caactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaacatactactttaa 199  Q
    ||||||||||||||||||||||| ||||||||||||||  ||||| ||  |||  ||||||||| ||| ||||||||||||||||||||||    
T  49392132 caactatttattgaaaaacaacagttatttattaaaaaagtatattta--ataagaaatacacatgtttcaatacaaacatactactttaa 49392220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 23591718 - 23591824
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttaca 179  Q
    |||||||||||||||| || ||||| ||| || | ||||||||||| ||| ||||||||||||||||||||||||| | ||| |||||  ||||||| ||    
T  23591718 attgcacatgttaaagcaactaaaattagtaagtttttattgaaaatcaataattatttattaaaaagttatatatttaatacaaaatgtacaagttcca 23591817  T
Q  180 atacaaa 186  Q
    || ||||    
T  23591818 atgcaaa 23591824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 25465176 - 25465253
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||||||||||||| | ||||| |||||||| |||||||| ||||||||||||||||| ||||||||| ||||    
T  25465176 aatattgcacatgttaaagtcactaaaagtagcaact-tttattgagaaacaacaattatttatcaaaaagttaaatat 25465253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 155
Target Start/End: Complemental strand, 1502901 - 1502803
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  ||||||||||||||||| |||| ||||| |||||| | ||||||| |||||||||||||||||  ||||||||||||||    
T  1502901 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattg-aaaacaacaattatttaacaaaaagttatatat 1502803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 9516639 - 9516698
Alignment:
Q  118 attgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtta 177  Q
    ||||||||||| |||||||||||||||||||||||||| | ||| |||||||||||||||    
T  9516639 attgaaaaacaccaattatttattaaaaagttatatatttaatataaaatacacaagtta 9516698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 199
Target Start/End: Complemental strand, 39150508 - 39150366
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  ||||||||||||||||| | || ||||| ||| |||| || |||||||| ||||||||||||||| |||||||| ||||    
T  39150508 aagggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttacatat 39150410  T
Q  156 atgatagaaaatacacaagttacaatacaaacatactactttaa 199  Q
     | ||| |||| |||||| || |||  ||||  |||||||||||    
T  39150409 ttaatataaaaaacacaaattccaagtcaaagttactactttaa 39150366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 34050444 - 34050366
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||||||| ||  |||| || ||| |  ||||||||||||||||||||||||| ||||| ||||||||    
T  34050444 aatattgcacatgttaaagcaaccaaaagtaacaaattattattgaaaaacaacaattatttatcaaaaaattatatat 34050366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 41624847 - 41624968
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||||||| || ||||||||| |||| ||||||| ||| ||||||||| ||||||||||  || |||  | ||| ||||| ||||||||    
T  41624847 aatattgcacatgttaaagcaactaaaaatagtaactttttattg-aaaccaacaattaattattaaaaatctacataattaatataaaatgcacaagtt 41624945  T
Q  177 acaatacaaacatactactttaa 199  Q
     |||  ||||  |||||||||||    
T  41624946 ccaagtcaaagttactactttaa 41624968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 3121121 - 3121213
Alignment:
Q  62 ttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||| ||||||||  |||||| || ||||||| |||||||||| |||||| | ||||||||||  |||||||||||||  ||||||||||||||    
T  3121121 ttgtctaatatgtgcaatattacatatgttaaggtaattaaaagtagcaagtttttattgaaac-caacaattatttaacaaaaagttatatat 3121213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 51613058 - 51613122
Alignment:
Q  87 atgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttata 152  Q
    |||||||||||| |||||||| | |||||||||| |||||||| |||||||||||||||| |||||    
T  51613058 atgttaaagtaactaaaaataacgactatttatt-aaaaacaataattatttattaaaaatttata 51613122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 8062207 - 8062291
Alignment:
Q  62 ttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaa 146  Q
    |||||||| ||||  ||||||| ||||||||| |||| ||||| ||| |||| || |||||||| ||||||||||| ||||||||    
T  8062207 ttgtttaacatgtgcaatattgaacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaaa 8062291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 44918042 - 44918110
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaa 145  Q
    ||||||||||||||||| |||| ||||| ||| || | ||||||||||| ||||||||||| |||||||    
T  44918042 aatattgcacatgttaaggtaactaaaagtagtaaatttttattgaaaatcaacaattattgattaaaa 44918110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 155
Target Start/End: Original strand, 6520708 - 6520806
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  |||||| |||| ||||||| || ||||| || ||||| ||| |||||||||||||||||||||||||||| ||| ||||    
T  6520708 aagggtttgtctaacatgtacaatattacacaggttaaagaaactaaaagtaacaact-tttcttgaaaaacaacaattatttattaaaaaattaaatat 6520806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 199
Target Start/End: Original strand, 6754468 - 6754610
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  ||||||||||||||||| | || ||||||||| |||| ||||||| ||| ||||||||| ||||||||||  || |||     
T  6754468 aagggattgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattg-aaaccaacaattaattattaaaaatctacataa 6754566  T
Q  156 atgatagaaaatacacaagttacaatacaaacatactactttaa 199  Q
     | ||| ||||| |||||||| |||  ||||  |||||||||||    
T  6754567 ttaatataaaatgcacaagttccaagtcaaagttactactttaa 6754610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 199
Target Start/End: Original strand, 17919450 - 17919592
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  ||||||| ||||||||| | || ||||| ||| |||| || |||||||| ||||||||||||||| |||||||| ||||    
T  17919450 aagggtttgtctaacatgtgcaatattgtacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttacatat 17919548  T
Q  156 atgatagaaaatacacaagttacaatacaaacatactactttaa 199  Q
     | ||| |||| |||||| || |||  ||||  |||||||||||    
T  17919549 ttaatataaaaaacacaaattccaagtcaaagttactactttaa 17919592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 150
Target Start/End: Original strand, 19277843 - 19277878
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagtta 150  Q
    ||||||||||||||||||||||||||||||||||||    
T  19277843 tttattgaaaaacaacaattatttattaaaaagtta 19277878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 30363152 - 30363057
Alignment:
Q  81 ttgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||| |  | ||||||||| |||| ||||||||||| ||||||||| ||||||||||  || |||| | ||| ||||| ||||||||    
T  30363152 ttgcacatgttaaggctactaaaaatagtaactttttattgaaaaccaacaattaattattaaaaacctacatatttaatataaaatgcacaagtt 30363057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 35438773 - 35438828
Alignment:
Q  118 attgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaa 173  Q
    ||||||||||| ||||| |||||||||||||||||||| | ||| |||||||||||    
T  35438773 attgaaaaacaccaattgtttattaaaaagttatatatttaatataaaatacacaa 35438828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 146
Target Start/End: Complemental strand, 40799429 - 40799350
Alignment:
Q  67 taatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaa 146  Q
    ||||||||  |||||||||||||||| || || ||||| ||  |||| |||||||||||| || ||||||||||||||||    
T  40799429 taatatgtgcaatattgcacatgttagagcaactaaaagtatgaactttttattgaaaaataaaaattatttattaaaaa 40799350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 7520158 - 7520080
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||||||| || ||||| ||| || | |||||| ||||| || | ||||||||||||| |||||||||    
T  7520158 aatattgcacatgttaaagcaactaaaagtagtaaatttttattaaaaaataatacttatttattaaaatgttatatat 7520080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 23576574 - 23576497
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||||| |||| ||||| || ||| | ||||||| ||| |||||||||||||  ||||||||||||||    
T  23576574 aatattgcacatgttaaggtaactaaaagtaacaagtttttattg-aaaccaacaattatttaacaaaaagttatatat 23576497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 25956666 - 25956744
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||||| |||||  || ||| ||||  |||| ||| ||||||||||||||||||||||| ||||||| |||||    
T  25956666 aatattgcacatattaaaacaactaataataataactttttcttgaaaaacaacaattatttatttaaaagttttatat 25956744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 30109159 - 30109089
Alignment:
Q  85 acatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||| || ||||| |||||| | | |||  |||||||||||||||||||||||||||| |||||    
T  30109159 acatgttaaagaaactaaaagtagcaattttatatgaaaaaacaacaattatttattaaaaagttgtatat 30109089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 173
Target Start/End: Complemental strand, 33048235 - 33048177
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaa 173  Q
    |||||| ||||| |||||||||||||||||||||||||||| | ||| |||||| ||||    
T  33048235 tttattaaaaaataacaattatttattaaaaagttatatatttaatataaaatatacaa 33048177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 146
Target Start/End: Complemental strand, 32543211 - 32543142
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaa 146  Q
    |||| |||| || |||||||||| |||| |||||  | |||||||||| |||||||||||||||||||||    
T  32543211 aatactgcatattttaaagtaataaaaagtagcatttttttattgaaagacaacaattatttattaaaaa 32543142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 43317507 - 43317575
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaa 146  Q
    ||||||| ||||||||||| || ||||| ||| |||||||| ||| ||||||||||| ||||||||||||    
T  43317507 aatattgtacatgttaaagcaactaaaagtagtaactattttttg-aaaacaacaatcatttattaaaaa 43317575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 186
Target Start/End: Complemental strand, 47355538 - 47355430
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||||||| || ||||| ||  |||| ||||||| ||||||||||||| |||| |||||| |||||   | ||| |||||  |||||||    
T  47355538 aatattgcacatgttaaagcaactaaaagtataaactttttattg-aaaacaacaattacttatcaaaaaggtatatcattaatataaaatgaacaagtt 47355440  T
Q  177 acaatacaaa 186  Q
     |||||||||    
T  47355439 ccaatacaaa 47355430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 138
Target Start/End: Original strand, 51382389 - 51382450
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattattt 138  Q
    ||||||||||||||||| |||| ||||| ||| |||| || |||||||| ||||||||||||    
T  51382389 aatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattt 51382450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 313767 - 313835
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaa 145  Q
    ||||||||||||||||| |||| ||||| ||| || | || |||||||| ||||||||||| |||||||    
T  313767 aatattgcacatgttaaggtaactaaaagtagtaatttttgattgaaaaccaacaattattgattaaaa 313835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 13241816 - 13241876
Alignment:
Q  119 ttgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttaca 179  Q
    ||||||||||  |||||||||||||||| |||||||| | |||  ||||||||||||||||    
T  13241816 ttgaaaaacacaaattatttattaaaaaattatatatttaatatgaaatacacaagttaca 13241876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 5857991 - 5858084
Alignment:
Q  62 ttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaac-aattatttattaaaaagttatatat 155  Q
    |||||||| ||||  ||||||  |||| |||||  |||||||| || ||||| |||||| ||||||||  |||||||||||||||||||||||||    
T  5857991 ttgtttaacatgtgcaatatttgacatattaaaacaattaaaagtaacaactttttatt-aaaaacaagtaattatttattaaaaagttatatat 5858084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 146
Target Start/End: Original strand, 22167355 - 22167421
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaa 146  Q
    |||||||||||||||  || ||| | ||| |||| ||| ||||||||||||||||||||||| ||||    
T  22167355 attgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaa 22167421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 51920584 - 51920514
Alignment:
Q  85 acatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||  |||||| | ||| || | ||| ||||||||||||||||||||||| ||||||| |||||    
T  51920584 acatgttaaaacaattaatagtagtaatttttttttgaaaaacaacaattatttattcaaaagttttatat 51920514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 22331643 - 22331704
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttatt 141  Q
    ||||||||||||||| ||  ||| | ||| |||| ||| |||||||||||||||||||||||    
T  22331643 attgcacatgttaaaatatctaatagtagtaactttttcttgaaaaacaacaattatttatt 22331704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 170
Target Start/End: Original strand, 38539104 - 38539196
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaataca 170  Q
    ||||||||||||||||| | || ||||  |||||||| |  |||| |||||| |||||| ||||||||||||||| ||| | |||||| |||||    
T  38539104 aatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaatta-ttattaaaaagttatctattttatagaatataca 38539196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 170
Target Start/End: Original strand, 38561322 - 38561414
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaataca 170  Q
    ||||||||||||||||| | || ||||  |||||||| |  |||| |||||| |||||| ||||||||||||||| ||| | |||||| |||||    
T  38561322 aatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaatta-ttattaaaaagttatctattttatagaatataca 38561414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 52337834 - 52337887
Alignment:
Q  128 aacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaat 181  Q
    ||||||||||||||||||| |||||||| | ||| |||||||| ||||| ||||    
T  52337834 aacaattatttattaaaaatttatatatttaatataaaatacataagttgcaat 52337887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 147
Target Start/End: Complemental strand, 2222358 - 2222326
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaag 147  Q
    ||||||||||||||| |||||||||||||||||    
T  2222358 tttattgaaaaacaataattatttattaaaaag 2222326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 26978110 - 26978174
Alignment:
Q  122 aaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaa 186  Q
    |||||||||||||||||||| |||| || ||||| | |||  ||||| ||||||| |||||||||    
T  26978110 aaaaacaacaattatttattcaaaaattttatatttaatattaaatatacaagtttcaatacaaa 26978174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Complemental strand, 35941138 - 35941106
Alignment:
Q  122 aaaaacaacaattatttattaaaaagttatata 154  Q
    |||||||||| ||||||||||||||||||||||    
T  35941138 aaaaacaacatttatttattaaaaagttatata 35941106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 187
Target Start/End: Original strand, 2096888 - 2096998
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||| ||||||  || ||||| |  ||||| ||||||||||||||||||||||||||||||||||||||||| | ||| ||||| ||||||||    
T  2096888 aatattgcacaagttaaatcaactaaaagtgacaactttttattgaaaaacaacaattatttattaaaaagttatatatttaatataaaatgcacaagtt 2096987  T
Q  177 acaatacaaac 187  Q
     ||||||||||    
T  2096988 ccaatacaaac 2096998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 155
Target Start/End: Original strand, 34941280 - 34941373
Alignment:
Q  62 ttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||| ||| |||| ||||||||||||| |||| |||| ||||| || ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  34941280 ttgtctaacatgtgtaatattgcacatattaaggtaactaaaagtaacaactttttattgaaaaacaacaactatttattaaaaagttatatat 34941373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 49181089 - 49181198
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||||| | || ||||| |||||||  || |||||||||||||||| ||||||| |||||||| |||| | ||| ||||| ||||||||    
T  49181089 aatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatatttaatataaaatgcacaagtt 49181188  T
Q  177 acaatacaaa 186  Q
    ||||||||||    
T  49181189 acaatacaaa 49181198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 52391294 - 52391424
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| |||||||| |||| |||||||||||||| ||| ||| | ||| |||| ||| ||||||||||||||||||||||| ||||||| |||||    
T  52391294 aagggtttgtctaatatgtgtaatgttgcacatgttaaaataactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagttttatat 52391393  T
Q  156 atgatagaaaatacacaagttacaatacaaa 186  Q
     | |||  ||||  ||||||| |||||||||    
T  52391394 ttaatattaaatgtacaagttccaatacaaa 52391424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 42480083 - 42480005
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||||| |||||| || ||| | |||||||  |||||||||||||| ||||||||||||||||||||||||||    
T  42480083 aatattgcacatcttaaagcaactaagagtagcaacattttattgaaaaacatcaattatttattaaaaagttatatat 42480005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 51070516 - 51070447
Alignment:
Q  118 attgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaac 187  Q
    ||||||||||| |||| ||||||||||||||||||||| | ||| |||||||||||||||||| ||||||    
T  51070516 attgaaaaacaccaatcatttattaaaaagttatatatttaatataaaatacacaagttacaaaacaaac 51070447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 176
Target Start/End: Original strand, 6875518 - 6875617
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||||||  || ||||||||| ||   ||||||| |||| | |||||||||||| |||||||||| || | ||| ||||||||||||||    
T  6875518 aatattgcacatgttaaaacaactaaaaatagtaatattttattggaaaatatcaattatttattgaaaagttataaatttaatataaaatacacaagtt 6875617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 9759302 - 9759225
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||||| |||| ||||| |||||| | ||||||| ||| |||||||||||||  ||||||||||||||    
T  9759302 aatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatat 9759225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 186
Target Start/End: Complemental strand, 19451082 - 19450952
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||| ||| ||||  || |||||||||||||||  || ||| | ||| |||| ||| ||| ||||||||||||||||||| ||||||| |||||    
T  19451082 aaggggttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatat 19450983  T
Q  156 atgatagaaaatacacaagttacaatacaaa 186  Q
     | |||  ||||  ||||||| |||||||||    
T  19450982 ttaatattaaatgtacaagttccaatacaaa 19450952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 182
Target Start/End: Complemental strand, 37784998 - 37784916
Alignment:
Q  100 taaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaata 182  Q
    ||||| |||||||| ||||||||||||||| ||| |||||||||||||||| |||| | | | ||||| ||||| ||||||||    
T  37784998 taaaagtagcaactttttattgaaaaacaataatcatttattaaaaagttacatatttaacataaaatgcacaaattacaata 37784916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 167
Target Start/End: Original strand, 39876848 - 39876937
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaat 167  Q
    ||||||||||||||||| |||| ||||| ||| || | ||||||||||  |||||||||||||  |||||||||||||| ||||| |||||    
T  39876848 aatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaac-caacaattatttaacaaaaagttatatatttgatacaaaat 39876937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 50352320 - 50352397
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||||| |||| ||||| |||||| | ||||||| ||| |||||||||||||  ||||||||||||||    
T  50352320 aatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatat 50352397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 35645163 - 35645084
Alignment:
Q  79 tattgcacatgttaaagtaattaaaaatagcaactattt---attgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||| | ||||||| || ||||| |||||||| |||   ||||||||| ||||||||||||||||||||||||||||    
T  35645163 tattgcatacgttaaagaaactaaaagtagcaacttttttttattgaaaaataacaattatttattaaaaagttatatat 35645084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 193
Target Start/End: Complemental strand, 54506556 - 54506463
Alignment:
Q  100 taaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaacatacta 193  Q
    |||||||||||| ||||||||||| ||||||||| |||| ||||||| || ||||| | ||| |||||| ||| ||| |||| ||||| |||||    
T  54506556 taaaaatagcaagtatttattgaagaacaacaatcatttgttaaaaaattgtatatttaatacaaaatatacatgtttcaatgcaaacttacta 54506463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 36000100 - 36000032
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaa 145  Q
    ||||||| ||||||||| |||| ||||| ||| |||| ||||||||||| ||||||||||| |||||||    
T  36000100 aatattgtacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaa 36000032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 186
Target Start/End: Original strand, 38222304 - 38222412
Alignment:
Q  78 atattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtta 177  Q
    |||||| | ||||||||| || ||||| || ||| | |||| |||||| |||||||||||||||||||| |||||||| | ||| ||||| ||||| ||     
T  38222304 atattgtatatgttaaaggaactaaaagtaacaaatttttagtgaaaatcaacaattatttattaaaaaattatatatttaatataaaatccacaaattt 38222403  T
Q  178 caatacaaa 186  Q
     ||||||||    
T  38222404 taatacaaa 38222412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 53376574 - 53376493
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactattt----attgaaaaacaacaattatttattaaaaagttatata 154  Q
    ||||||||||||||||||  || ||||||||||  || |||    |||||||||||||||| ||||||||||||||||||||    
T  53376574 aatattgcacatgttaaaagaactaaaaatagcttctttttttttattgaaaaacaacaatcatttattaaaaagttatata 53376493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 49332350 - 49332425
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttata 152  Q
    |||||| |||||||||| |||||||||| ||  |||| || ||||||||| |  ||||||||||||||||||||||    
T  49332350 aatatttcacatgttaaggtaattaaaagtaataacttttcattgaaaaatattaattatttattaaaaagttata 49332425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 155
Target Start/End: Original strand, 55813920 - 55813959
Alignment:
Q  116 ttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  55813920 ttattgaaaatcaacaattatttattaaaaagttatatat 55813959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 16667504 - 16667446
Alignment:
Q  118 attgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    |||||||||||||| ||||||||||||||| || |||| | ||| ||||||||||||||    
T  16667504 attgaaaaacaacacttatttattaaaaagctacatatttaatataaaatacacaagtt 16667446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 19468214 - 19468320
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttaca 179  Q
    |||||||||||||||  || ||| | ||| |||| ||| ||| ||||||||||||||||||| ||||||| ||||| | |||  ||||  ||||||| ||    
T  19468214 attgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatgtacaagtttca 19468313  T
Q  180 atacaaa 186  Q
    |||||||    
T  19468314 atacaaa 19468320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 23553587 - 23553657
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaa-ctatttattgaaaaacaacaattatttattaaaaa 146  Q
    ||||||||||||||||| |||| ||||||||| ||  | ||||||||||| ||||||||||| ||||||||    
T  23553587 aatattgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattattgattaaaaa 23553657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 27019280 - 27019386
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttaca 179  Q
    |||||||||||||||  || ||| | ||| |||| ||| ||| ||||||||||||||||||| ||||||| ||||| | |||  ||||  ||||||| ||    
T  27019280 attgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatgtacaagtttca 27019379  T
Q  180 atacaaa 186  Q
    |||||||    
T  27019380 atacaaa 27019386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 27756579 - 27756700
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||||| | || ||||  |||||||| |  |||| |||||| |||||||| ||||||||||||| ||| | ||| | |||| |||||||    
T  27756579 aatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattatt-attaaaaagttatctatttaatatagaatatacaagtt 27756677  T
Q  177 acaatacaaacatactactttaa 199  Q
     ||| |||||| | |||||||||    
T  27756678 tcaagacaaacttgctactttaa 27756700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 51691362 - 51691467
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttaca 179  Q
    |||||||||||||||| || ||||| ||| || | |||||||||||  || ||||||||||||||||| ||||||| | ||  |||||| ||||||| ||    
T  51691362 attgcacatgttaaagcaactaaaa-tagtaagtctttattgaaaactaataattatttattaaaaagctatatatttaattcaaaatatacaagttcca 51691460  T
Q  180 atacaaa 186  Q
    || ||||    
T  51691461 atgcaaa 51691467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 146
Target Start/End: Complemental strand, 24993617 - 24993548
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaa 146  Q
    ||||||||||||||||||  || |||||| | | | | ||||||||||||||||||| ||||||||||||    
T  24993617 aatattgcacatgttaaatgaactaaaaaaaacgattttttattgaaaaacaacaatcatttattaaaaa 24993548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 173
Target Start/End: Original strand, 25843316 - 25843405
Alignment:
Q  85 acatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaag-ttatatatatgatagaaaatacacaa 173  Q
    ||||||||||| || ||||| ||| |||| ||||||||||||||||||  |||| |||||||| |||||||| | ||| ||||| |||||    
T  25843316 acatgttaaagcaactaaaagtagtaactttttattgaaaaacaacaaccatttgttaaaaagcttatatatttaatataaaatgcacaa 25843405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 155
Target Start/End: Original strand, 27298949 - 27298986
Alignment:
Q  118 attgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  27298949 attgaaaaacaccaattatttattaaaaagttatatat 27298986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 4779559 - 4779519
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||||||||||||||| |||| ||||||||    
T  4779559 tttattgaaaaacaacaattatttatttaaaaattatatat 4779519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 176
Target Start/End: Original strand, 7349706 - 7349804
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||||| | || ||||| ||  |||| || |||||||| |||||||||||| || |||||||| |||| | ||| |||| |||||||||    
T  7349706 aatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacaattatttgtt-aaaagttacatatttaatataaaaaacacaagtt 7349804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 10389428 - 10389330
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    |||||| ||||||||| ||||| ||||| ||  |||| || |||||||| ||||||||||| ||| |||||||| |||| | ||| |||| |||||||||    
T  10389428 aatattacacatgttatagtaactaaaagtattaacttttaattgaaaaccaacaattattgatt-aaaagttacatatttcatataaaaaacacaagtt 10389330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 146
Target Start/End: Complemental strand, 16069330 - 16069299
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaa 146  Q
    ||||||||||||||||||||||||||||||||    
T  16069330 tttattgaaaaacaacaattatttattaaaaa 16069299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 23545496 - 23545571
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||||||||  || ||| | ||| || | ||| ||||||||||||||||||||||| ||||||| |||||    
T  23545496 attgcacatgttaaaacaactaatagtagtaattttttcttgaaaaacaacaattatttattcaaaagttttatat 23545571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 24297392 - 24297467
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||| ||||||||  |||||| | ||| || | ||| ||||||||||||||||||||||| ||||||| |||||    
T  24297392 attgcatatgttaaaacaattaatagtagtaatttttttttgaaaaacaacaattatttatttaaaagttttatat 24297467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 144
Target Start/End: Complemental strand, 29190988 - 29190909
Alignment:
Q  65 tttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaa 144  Q
    ||||||||||  ||||||||| ||||||| |||| ||||| ||| || | || |||||||| ||||||||||| ||||||    
T  29190988 tttaatatgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaa 29190909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 146
Target Start/End: Original strand, 17409844 - 17409910
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaa 146  Q
    |||||||||||||||  || ||| | ||| |||| ||| ||||||||||||||||||||||| ||||    
T  17409844 attgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaa 17409910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 33559264 - 33559314
Alignment:
Q  123 aaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaa 173  Q
    |||| ||||||||||||||||||| |||||||| | ||| |||||||||||    
T  33559264 aaaaaaacaattatttattaaaaaattatatatttaatataaaatacacaa 33559314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 40049576 - 40049653
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||||||||||||||| ||||| ||| || | ||||| | ||| |||||||||||||  ||||| ||||||||    
T  40049576 aatattgcacatgttaaagtaactaaaagtagtaagtttttatag-aaaccaacaattatttaacaaaaaattatatat 40049653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 33632330 - 33632285
Alignment:
Q  110 aactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||| ||| ||||||||||||||||||||||| ||||||| |||||    
T  33632330 aacttttttttgaaaaacaacaattatttattcaaaagttttatat 33632285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 44571664 - 44571568
Alignment:
Q  102 aaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaacatactactttaa 199  Q
    |||||| ||||| |||||| |||||||| ||||| |||||||||| |||||||| | ||| |||||  | |||||  ||||||||  |||||||||||    
T  44571664 aaaatatcaactttttatt-aaaaacaataattacttattaaaaatttatatatttaatataaaatgtataagttcaaatacaaatctactactttaa 44571568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 8736933 - 8736893
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||| | |||||||||||||||||| ||||    
T  8736933 tttattgaaaaacaaaacttatttattaaaaagttacatat 8736893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 10813655 - 10813587
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaa 145  Q
    ||||||||| ||||||| | || ||||| ||  |||| ||||||||||| |||||||||||| ||||||    
T  10813655 aatattgcatatgttaaggcaactaaaagtaataactttttattgaaaaccaacaattatttgttaaaa 10813587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 199
Target Start/End: Complemental strand, 46492523 - 46492382
Alignment:
Q  58 ggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatat 157  Q
    |||||||||||| ||||  ||||||||||||||||||| || ||||| | | || | |||||||||||||||||||||||||||||  |||||||||| |    
T  46492523 ggggttgtttaaaatgtgcaatattgcacatgttaaagcaactaaaagtggtaagtttttattgaaaaacaacaattatttattaacgagttatatattt 46492424  T
Q  158 gatagaaaatacacaagttacaatacaaacatactactttaa 199  Q
     ||| |||||  ||||||| |||| ||||  |||||||||||    
T  46492423 aatacaaaatgtacaagtttcaatgcaaagttactactttaa 46492382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 157
Target Start/End: Complemental strand, 15863066 - 15862986
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatat 157  Q
    |||||||||||||||| || |||||||| |||||||| |  ||||||||| |||||||||||||| |||||||||||||||    
T  15863066 aatattgcacatgttacaggaattaaaagtagcaactttacattgaaaaagaacaattatttatttaaaagttatatatat 15862986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 49396368 - 49396446
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||| ||||||||| || |||||||| ||| | || |||||||||| |||||||||||||||||||||||||||    
T  49396368 aatattgcatatgttaaaggaactaaaaataacaatttttgattgaaaaactacaattatttattaaaaagttatatat 49396446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 185
Target Start/End: Complemental strand, 37055548 - 37055419
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  ||||||||| ||||||||| || ||||||||| |||| |  ||||||||| |||||||||||||||||||||| ||||     
T  37055548 aagggtttgtctaacatgtacaatattgcatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatag 37055449  T
Q  156 atgatagaaaatacacaagttacaatacaa 185  Q
     | ||| |||| ||||||||| | ||||||    
T  37055448 ttaatataaaaaacacaagttccgatacaa 37055419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 199
Target Start/End: Original strand, 11610911 - 11611053
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  ||||||||||||||||| | || ||||| ||| |||| || |||||||| ||||||||||||||| |||||||| ||||    
T  11610911 aagggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttacatat 11611009  T
Q  156 atgatagaaaatacacaagttacaatacaaacatactactttaa 199  Q
     | ||| |||| ||||||||| |||  ||||  |||||||||||    
T  11611010 ttaatataaaaaacacaagttccaagtcaaagttactactttaa 11611053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 155
Target Start/End: Original strand, 53794780 - 53794859
Alignment:
Q  76 taatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||||||||||||  || ||||||||  ||||||||||||||||  |||||| |||||||||||||||| ||||    
T  53794780 taatattgcacatgttaaaccaactaaaaataataactatttattgaaaagtaacaataatttattaaaaagttacatat 53794859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 199
Target Start/End: Original strand, 13495315 - 13495433
Alignment:
Q  81 ttgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaa 180  Q
    ||||||||||||| |||| ||||| ||| || | ||||||||||| ||||||||||||||||||||  || |||| | ||| ||||| |||||||| |||    
T  13495315 ttgcacatgttaaggtaactaaaagtagtaattttttattgaaaatcaacaattatttattaaaaacctacatatttaatataaaatgcacaagttccaa 13495414  T
Q  181 tacaaacatactactttaa 199  Q
      ||||  |||||||||||    
T  13495415 gtcaaaattactactttaa 13495433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 197
Target Start/End: Complemental strand, 14847140 - 14847041
Alignment:
Q  96 taattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaacatactact 195  Q
    |||||||||||| ||| | ||||||||||  ||| ||||||||||| |||| ||||||||   ||| ||||||||||||||||||||||||| |||||||    
T  14847140 taattaaaaata-caattttttattgaaac-caataattatttatttaaaatttatatattcaatataaaatacacaagttacaatacaaacttactact 14847043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 147
Target Start/End: Complemental strand, 46845616 - 46845531
Alignment:
Q  62 ttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaag 147  Q
    |||| ||||||||  |||||||||||| |||||| || ||||| ||| || | ||||||||||| |||||||||||||||||||||    
T  46845616 ttgtctaatatgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaaaag 46845531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 23320125 - 23320196
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaa 186  Q
    |||||||||||||| |||||||||||||||||| ||||||| | ||| ||||||||| |||| ||| |||||    
T  23320125 tttattgaaaaacatcaattatttattaaaaagatatatatttaatataaaatacacgagtttcaagacaaa 23320196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 186
Target Start/End: Complemental strand, 32321903 - 32321776
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| |||| |||||||||| ||||||||  || |||||||| ||||| ||||||||||||||| ||| ||||||  |||| ||||||||    
T  32321903 aagggtttgtataacatgtgtaatattgcatatgttaaaagaactaaaaatatcaact-tttattgaaaaacaaaaatcatttat--aaaaattatatat 32321807  T
Q  156 atgatagaaaatacacaagttacaatacaaa 186  Q
     | |||  ||||||||| ||| |||||||||    
T  32321806 ttaatatgaaatacacatgtttcaatacaaa 32321776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 2571286 - 2571363
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||||| |||| ||||| |||||| | ||||||| ||| |||||||||||||  ||||||||||||||    
T  2571286 aatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatat 2571363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 12515634 - 12515557
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||||| |||| ||||| |||||| | |||||| |||| |||||||||||||  ||||||||||||||    
T  12515634 aatattgcacatgttaaggtaactaaaagtagcaagtttttatt-aaaaccaacaattatttaacaaaaagttatatat 12515557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 30473028 - 30472935
Alignment:
Q  101 aaaaatagcaactatttattgaaaaacaacaattatttatta-aaaagttatatatatgatagaaaatacacaagttacaatacaaacatacta 193  Q
    ||||||| ||| | |||||| |||||||||||| |||||||| ||||| |||| || | ||| ||||||||||||||| ||||||||| |||||    
T  30473028 aaaaataacaattttttatttaaaaacaacaatcatttattaaaaaagatatacatttaatataaaatacacaagttataatacaaacttacta 30472935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 7940854 - 7940918
Alignment:
Q  122 aaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaa 186  Q
    |||||||  ||||||||||||||||||||||||| | ||| |||||||| ||||||||| |||||    
T  7940854 aaaaacactaattatttattaaaaagttatatatttaatataaaatacagaagttacaagacaaa 7940918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 51339344 - 51339276
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaa 145  Q
    ||||||||||||||||| |||| ||||||||| || | || |||||||| ||||||||||| |||||||    
T  51339344 aatattgcacatgttaaggtaactaaaaatagtaatttttcattgaaaaccaacaattattgattaaaa 51339276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 51618067 - 51618135
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaa 145  Q
    ||||||||||||||||||  || |||||  ||||| | |||| ||||||||||||||||||||||||||    
T  51618067 aatattgcacatgttaaaacaactaaaagcagcaagtttttactgaaaaacaacaattatttattaaaa 51618135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 151
Target Start/End: Original strand, 9710964 - 9711035
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttat 151  Q
    |||||||||||||||  || ||||| ||| || | ||||||||||||||||||||||| |||||||| ||||    
T  9710964 attgcacatgttaaaacaactaaaactagtaagtttttattgaaaaacaacaattattaattaaaaatttat 9711035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 23638170 - 23638111
Alignment:
Q  117 tattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    |||||||||||| |||||||||| ||||||||| ||||| | ||| ||||||||||||||    
T  23638170 tattgaaaaacatcaattatttaataaaaagttgtatatttaatataaaatacacaagtt 23638111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 10307784 - 10307861
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||| ||| |||| ||||| |||||| | ||||||| ||| |||||||||||||  ||||||||||||||    
T  10307784 aatattgcacatgataaggtaactaaaagtagcaaatttttattg-aaaccaacaattatttaacaaaaagttatatat 10307861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 53718322 - 53718388
Alignment:
Q  76 taatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttatta 142  Q
    ||||||||||||||||||||  ||||||  |||||| | |||||| |||||||| ||||||||||||    
T  53718322 taatattgcacatgttaaagagattaaatgtagcaagtttttattaaaaaacaataattatttatta 53718388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 186
Target Start/End: Complemental strand, 54527864 - 54527758
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttaca 179  Q
    |||||||||||||||  || ||| | ||| |||| ||| ||| ||||||||||||||||||| ||||||| ||||| | |||  ||||  ||||||| ||    
T  54527864 attgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatttaatattaaatgtacaagttcca 54527765  T
Q  180 atacaaa 186  Q
    |||||||    
T  54527764 atacaaa 54527758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 20938074 - 20938143
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaa 146  Q
    ||||||||||||||||| |||| ||||| ||  |||| |||||||||||  |||||||||| ||||||||    
T  20938074 aatattgcacatgttaaggtaactaaaagtaataactttttattgaaaactaacaattattgattaaaaa 20938143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 24569398 - 24569325
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagtta 150  Q
    ||||||| |||||||||   || || |||||  |||| |||||||||||||| |||||||||||||||||||||    
T  24569398 aatattggacatgttaagacaactacaaataataactttttattgaaaaacatcaattatttattaaaaagtta 24569325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 53537128 - 53537075
Alignment:
Q  101 aaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatata 154  Q
    |||||||| |||| |  |||||||||||||||||||||||||||||||| ||||    
T  53537128 aaaaatagtaactttacattgaaaaacaacaattatttattaaaaagttttata 53537075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 23803174 - 23803098
Alignment:
Q  110 aactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaa 186  Q
    |||| ||| ||||||||||||||||||||||| ||||||| ||||| | |||  ||||| ||||||| |||| ||||    
T  23803174 aactttttcttgaaaaacaacaattatttattcaaaagttttatatttaatatgaaatatacaagttccaatgcaaa 23803098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 33474596 - 33474556
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||||||||||||||| |||| ||||||||    
T  33474596 tttattgaaaaacaacaattatttatttaaaaattatatat 33474556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 47386939 - 47387015
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaa-caattatttattaaaaagttata 152  Q
    |||||||| ||| |||||| || ||||| ||| || | |||||||||||| || |||||||||||||||||||||||    
T  47386939 aatattgcgcatattaaagcaactaaaagtagtaagtttttattgaaaaaaaaacaattatttattaaaaagttata 47387015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 199
Target Start/End: Original strand, 50364210 - 50364329
Alignment:
Q  79 tattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttac 178  Q
    |||||||||||| || |||| ||||| ||| ||||  | |||||||| ||||||||||| ||| |||||||| |||| | ||| |||| ||||||||| |    
T  50364210 tattgcacatgtaaaggtaactaaaagtagtaacttataattgaaaaccaacaattattgatt-aaaagttacatatttaatataaaaaacacaagttcc 50364308  T
Q  179 aatacaaacatactactttaa 199  Q
    ||  ||||  |||||||||||    
T  50364309 aagtcaaagttactactttaa 50364329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 186
Target Start/End: Complemental strand, 1569313 - 1569242
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaa 186  Q
    |||||| |||||||||||| |||||||| ||||||| |||| | ||| |||||  ||||||| |||||||||    
T  1569313 tttattaaaaaacaacaataatttattagaaagttacatatctaatataaaatgaacaagttccaatacaaa 1569242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 7220173 - 7220232
Alignment:
Q  117 tattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||| ||||||||| ||||||| ||||||| | |||  |||||||||||||    
T  7220173 tattgaaaaacaataattatttactaaaaagatatatatttaatatcaaatacacaagtt 7220232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 146
Target Start/End: Original strand, 37444134 - 37444232
Alignment:
Q  47 aaataaaacaaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaa 146  Q
    ||||| || ||||| |||| ||| ||||  ||||||||||||||||| | || ||||| ||| |||| ||||||| ||| ||||||||| ||||||||||    
T  37444134 aaatataataagggattgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattg-aaatcaacaattaattattaaaaa 37444232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 51567932 - 51567869
Alignment:
Q  123 aaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaa 186  Q
    ||||||||||||||||||| ||||||| ||||| | |||| ||||  ||||||| |||||||||    
T  51567932 aaaacaacaattatttattcaaaagttttatatttaatagtaaatgtacaagtttcaatacaaa 51567869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 155
Target Start/End: Complemental strand, 35414930 - 35414892
Alignment:
Q  117 tattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||||||||||||||| || |||||||||||||    
T  35414930 tattgaaaaacaacaattatttgttcaaaagttatatat 35414892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 54320807 - 54320719
Alignment:
Q  110 aactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaacatactactttaat 200  Q
    |||| ||||||||||| || ||||||||| ||||||| |||||||| | ||| |||| |||||| || ||||| | |||||||||||||||    
T  54320807 aactttttattgaaaacca-caattattttttaaaaaattatatat-taatataaaacacacaaatttcaatatatacatactactttaat 54320719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 2379230 - 2379134
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||||||  || ||||| ||| || | ||||||||| |||||   |||||||||||||||| ||||||   ||| |||||| |||||||    
T  2379230 aatattgcacatgttaaaacaactaaaagtagtaagtttttattgaataacaa---ttatttattaaaaagtcatatattaaatacaaaatatacaagtt 2379134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 145
Target Start/End: Original strand, 3863326 - 3863415
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaa 145  Q
    ||||| |||| ||| ||||  ||||||||||||||||| |||| ||||  ||| |||| || |||||||| || |||||||| |||||||    
T  3863326 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaggtagtaacttttcattgaaaatcagcaattattgattaaaa 3863415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 147
Target Start/End: Original strand, 3214977 - 3215009
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaag 147  Q
    |||||||| ||||||||||||||||||||||||    
T  3214977 tttattgacaaacaacaattatttattaaaaag 3215009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 26486487 - 26486439
Alignment:
Q  128 aacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    |||||||||||||||||||  ||||||| | ||| ||||||||||||||    
T  26486487 aacaattatttattaaaaaactatatatttaatataaaatacacaagtt 26486439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 176
Target Start/End: Original strand, 38389467 - 38389563
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||  ||  ||||| ||| || | ||||||||||||||| | ||||||||||||||| || |||| | |||  |||| ||||||||    
T  38389467 attgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagtt 38389563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 39248510 - 39248546
Alignment:
Q  119 ttgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  39248510 ttgaaaaacaaaaattatttattaaaaaattatatat 39248546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 193
Target Start/End: Complemental strand, 18153 - 18041
Alignment:
Q  81 ttgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaa 180  Q
    |||||| |||||||| |||||||| ||| |||| || ||| ||||||||||||||||||||| |||||||||||| | ||| |||||  |||| || |||    
T  18153 ttgcacgtgttaaaggaattaaaagtagtaactcttaattaaaaaacaacaattatttattagaaagttatatatttaatataaaatgtacaaattccaa 18054  T
Q  181 tacaaacatacta 193  Q
    |||||||||||||    
T  18053 tacaaacatacta 18041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 17911 - 17844
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaata 182  Q
    |||||||||||| ||||||||||||||||||| |||||| | | ||| |||||  ||||||| |||||    
T  17911 tttattgaaaaataacaattatttattaaaaatttatatctttaatacaaaatgtacaagttccaata 17844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 187
Target Start/End: Complemental strand, 39990198 - 39990088
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    |||||| |||||||| | |||| ||||||||||||||||||||||||||||||||||||| || ||||||    ||||| | ||||||||| ||||||||    
T  39990198 aatattacacatgttgatgtaactaaaaatagcaactatttattgaaaaacaacaattatctaataaaaaaagttatatttaatagaaaatgcacaagtt 39990099  T
Q  177 acaatacaaac 187  Q
     ||| ||||||    
T  39990098 tcaagacaaac 39990088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 199
Target Start/End: Original strand, 2795520 - 2795662
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  ||||||||||||||||| |||| ||||| ||| |||| || |||||||| ||||||||||| ||| |||||||| ||||    
T  2795520 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgatt-aaaagttacatat 2795618  T
Q  156 atgatagaaaatacacaagttacaatacaaacatactactttaa 199  Q
     | ||| |||| ||||||||| |||  ||||  |||||||||||    
T  2795619 ttaatacaaaaaacacaagttccaagtcaaagttactactttaa 2795662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 175
Target Start/End: Original strand, 28629896 - 28629993
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagt 175  Q
    ||||||||||||||||||| || ||||||||  |||| || |||||||| ||||||||||||||| |||||||| |||| | ||| |||| ||||||||    
T  28629896 aatattgcacatgttaaagcaactaaaaataataacttttcattgaaaaccaacaattatttatt-aaaagttacatatttaatataaaaaacacaagt 28629993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 40166337 - 40166406
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaataca 184  Q
    |||||||||||||||||||||||||| |||||||||||||| | ||| |||||  ||||||| |||||||    
T  40166337 tttattgaaaaacaacaattatttatcaaaaagttatatatttaatacaaaatgtacaagtttcaataca 40166406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 155
Target Start/End: Original strand, 11636728 - 11636827
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  ||||||||||||||||||| || ||||| ||| |||| || |||||||| ||||||||| |||||||||| ||| ||||    
T  11636728 aagggtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatat 11636827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 155
Target Start/End: Original strand, 36597576 - 36597674
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  ||||||||||||||||| |||| ||||| |||||| | ||||||| ||| |||||||||||||  ||||||||||||||    
T  36597576 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattg-aaaccaacaattatttaacaaaaagttatatat 36597674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 11250143 - 11250042
Alignment:
Q  51 aaaacaaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagtta 150  Q
    |||| ||||| |||||||| ||||  ||||||||||||||||||| || ||||| |||||| | |||| ||| |||||||||||||||| ||| || |||    
T  11250143 aaaaaaagggtttgtttaacatgtgcaatattgcacatgttaaagcaactaaaagtagcaagt-tttaatgataaacaacaattatttagtaataaatta 11250045  T
Q  151 tat 153  Q
    |||    
T  11250044 tat 11250042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 30839799 - 30839876
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||||||||||||| |||| ||||| |||||| | ||||||| ||| |||||||||||||  ||||||||||||||    
T  30839799 aatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatat 30839876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 199
Target Start/End: Original strand, 35469575 - 35469693
Alignment:
Q  82 tgcacatgttaaagtaattaaaaatagcaactattt-attgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaa 180  Q
    ||||||||||||||||| ||||| |||||| | ||| |||||||||||||||| | |||  |||||||||||||| | ||| |||||| || |||| |||    
T  35469575 tgcacatgttaaagtaactaaaagtagcaatttttttattgaaaaacaacaatcaattaagaaaaagttatatatttaatataaaataaactagttccaa 35469674  T
Q  181 tacaaacatactactttaa 199  Q
    || || | ||||| |||||    
T  35469675 taaaagcttactattttaa 35469693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 9184210 - 9184294
Alignment:
Q  62 ttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaa 146  Q
    |||| ||| |||| |||||||||||||||||| |||| ||||| ||| |||| || |||||||| ||| ||||||| ||||||||    
T  9184210 ttgtctaacatgtgtaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaataattattgattaaaaa 9184294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 11375977 - 11376045
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaa 145  Q
    ||||||||||||||||||| || ||||| ||| |||| || |||||||| ||| |||||||||||||||    
T  11375977 aatattgcacatgttaaagcaactaaaagtagtaacttttcattgaaaatcaataattatttattaaaa 11376045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 15241070 - 15241002
Alignment:
Q  118 attgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaa 186  Q
    ||||||||||||||||||||||||||||| |||||||| | ||| || || ||||| || |||||||||    
T  15241070 attgaaaaacaacaattatttattaaaaaattatatatttaatataacatgcacaaatttcaatacaaa 15241002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 11264644 - 11264687
Alignment:
Q  110 aactatttattgaaaaacaacaattatttattaaaaagttatat 153  Q
    |||| |||||||||||| ||||||||||||||||||||||||||    
T  11264644 aactttttattgaaaaagaacaattatttattaaaaagttatat 11264687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 186
Target Start/End: Original strand, 15837330 - 15837401
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaa 186  Q
    ||||||||||||||| ||||||||||||||| ||  ||||| | ||| ||||| |||||||| |||||||||    
T  15837330 tttattgaaaaacaataattatttattaaaatgtattatatttaatataaaatgcacaagtttcaatacaaa 15837401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 168
Target Start/End: Original strand, 40512969 - 40513059
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaata 168  Q
    ||||||||||||||||| |||| || || ||| || | ||||||||||  |||||||||||||  |||||||||||||| ||||| ||||||    
T  40512969 aatattgcacatgttaaggtaactagaagtagtaagtttttattgaaat-caacaattatttaacaaaaagttatatatttgatacaaaata 40513059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 8103740 - 8103619
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||||| | || ||||||||| |||| ||||||| ||| ||||||||| ||||||||||  || |||  | ||| ||||| ||||||||    
T  8103740 aatattgcacatgttaaggcaactaaaaatagtaactttttattg-aaaccaacaattaattattaaaaatctacataattaatataaaatgcacaagtt 8103642  T
Q  177 acaatacaaacatactactttaa 199  Q
     |||  ||||  |||||||||||    
T  8103641 ccaagtcaaagttactactttaa 8103619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 26265162 - 26265096
Alignment:
Q  120 tgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaa 186  Q
    |||||||||||||||||||||| ||||||| ||||| | |||  ||||| ||||||| |||||||||    
T  26265162 tgaaaaacaacaattatttatttaaaagttttatatttaatattaaatatacaagtttcaatacaaa 26265096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 176
Target Start/End: Original strand, 18150469 - 18150530
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||| |||| |||||||||||||||| ||||||||| | ||| |||||| |||||||    
T  18150469 tttattgaataacaccaattatttattaaaatgttatatatttaatacaaaatatacaagtt 18150530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 155
Target Start/End: Original strand, 6863584 - 6863651
Alignment:
Q  87 atgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||||| |||| ||||| |||||| | ||||||||||  ||||||||||||| |||||||||||||||    
T  6863584 atgttaaggtaactaaaagtagcaagtttttattgaaac-caacaattatttaataaaaagttatatat 6863651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 187
Target Start/End: Complemental strand, 10665131 - 10665016
Alignment:
Q  71 atgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaataca 170  Q
    |||| |||||||||||||||||| |||| ||||| ||  |||| || |||| |||| |  |||||||||||||||||||||| || | |||   ||||||    
T  10665131 atgtgtaatattgcacatgttaaggtaactaaaagtaataacttttcattg-aaaatattaattatttattaaaaagttataaatttaatatgcaataca 10665033  T
Q  171 caagttacaatacaaac 187  Q
    |||||| ||| ||||||    
T  10665032 caagttccaagacaaac 10665016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 155
Target Start/End: Complemental strand, 5958305 - 5958206
Alignment:
Q  56 aaggggttgtttaatatgtctaatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    ||||| |||| ||| ||||  |||||| |||||||||||| || ||||| ||| || | || |||||||| ||||||||| |||||||||| ||| ||||    
T  5958305 aagggtttgtctaacatgtgcaatattacacatgttaaagaaactaaaagtagtaatttttcattgaaaatcaacaattaattattaaaaatttacatat 5958206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 155
Target Start/End: Complemental strand, 18841863 - 18841788
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||||||||  || ||| | ||| |||| ||| ||| ||||||||||||||||||| ||||||| |||||    
T  18841863 attgcacatgttaaaacaactaatagtagtaacttttttttggaaaacaacaattatttattcaaaagttttatat 18841788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 187
Target Start/End: Complemental strand, 38994216 - 38994126
Alignment:
Q  97 aattaaaaatagcaactattta-ttgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagttacaatacaaac 187  Q
    ||||||||||||||| | |||| |||||| | |||||||||||||| ||||||||||||| |  || |||||| |||| || ||||||||||    
T  38994216 aattaaaaatagcaattttttaattgaaatataacaattatttatt-aaaagttatatatttactataaaatatacaaatttcaatacaaac 38994126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 155
Target Start/End: Complemental strand, 1203136 - 1203103
Alignment:
Q  122 aaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||||||| |||||||||||||||||||    
T  1203136 aaaaacaacaattacttattaaaaagttatatat 1203103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 15820281 - 15820333
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaat 167  Q
    ||||||||||||||| ||||||||||||||| ||  ||||| | |||||||||    
T  15820281 tttattgaaaaacaataattatttattaaaaggtattatatttaatagaaaat 15820333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 31567635 - 31567583
Alignment:
Q  94 agtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaa 146  Q
    ||||| |||||| || |||| ||||||||||||||| ||||||| ||||||||    
T  31567635 agtaactaaaaagagtaactttttattgaaaaacaataattattcattaaaaa 31567583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 52939 - 52818
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||||| |||| ||||| ||| |||| || |||||||| ||||||||||| ||| |||||||| |||| | ||| |||| |||||||||    
T  52939 aatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgatt-aaaagttacatatttaatacaaaaaacacaagtt 52841  T
Q  177 acaatacaaacatactactttaa 199  Q
     |||  ||||  |||||||||||    
T  52840 ccaagtcaaagttactactttaa 52818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 145695 - 145816
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||||| |||| ||||| ||| |||| || |||||||| ||||||||||| ||| |||||||| |||| | ||| |||| |||||||||    
T  145695 aatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgatt-aaaagttacatatttaatacaaaaaacacaagtt 145793  T
Q  177 acaatacaaacatactactttaa 199  Q
     |||  ||||  |||||||||||    
T  145794 ccaagtcaaagttactactttaa 145816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 5708 - 5778
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaa-ctatttattgaaaaacaacaattatttattaaaaa 146  Q
    ||||||||||||||||| |||| ||||||||| ||  | ||||||||||| ||||||||||| ||||||||    
T  5708 aatattgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattattgattaaaaa 5778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 22519 - 22559
Alignment:
Q  115 tttattgaaaaacaacaattatttattaaaaagttatatat 155  Q
    |||||||||||||| |||||||||||||||||| |||||||    
T  22519 tttattgaaaaacatcaattatttattaaaaagctatatat 22559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 40997 - 41059
Alignment:
Q  77 aatattgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattattta 139  Q
    |||||||||||  |||||| |||||||| || ||||| ||| ||||||||||||||| |||||    
T  40997 aatattgcacaacttaaagaaattaaaagtaacaacttttttttgaaaaacaacaatcattta 41059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 176
Target Start/End: Complemental strand, 37272 - 37176
Alignment:
Q  80 attgcacatgttaaagtaattaaaaatagcaactatttattgaaaaacaacaattatttattaaaaagttatatatatgatagaaaatacacaagtt 176  Q
    ||||||||||||||  ||  ||||| ||| || | ||||||||||||||| | ||||||||||||||| || |||| | |||  |||| ||||||||    
T  37272 attgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaatatgaaatgcacaagtt 37176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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