View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12581_low_19 (Length: 255)

Name: NF12581_low_19
Description: NF12581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12581_low_19
NF12581_low_19
[»] chr5 (58 HSPs)
chr5 (11-187)||(32305815-32305991)
chr5 (25-172)||(10721798-10721945)
chr5 (25-172)||(16752955-16753104)
chr5 (25-171)||(28494857-28495003)
chr5 (23-171)||(41834443-41834592)
chr5 (9-159)||(16752607-16752757)
chr5 (25-159)||(27307086-27307220)
chr5 (167-239)||(32305742-32305814)
chr5 (9-158)||(22651371-22651521)
chr5 (9-159)||(27307428-27307581)
chr5 (9-89)||(28495211-28495291)
chr5 (57-158)||(17260352-17260454)
chr5 (9-171)||(4966829-4966991)
chr5 (11-127)||(28289741-28289858)
chr5 (36-159)||(13557017-13557140)
chr5 (25-159)||(21371082-21371217)
chr5 (26-99)||(164276-164350)
chr5 (25-74)||(14215352-14215402)
chr5 (9-55)||(15709100-15709146)
chr5 (25-127)||(18150109-18150213)
chr5 (25-121)||(28290030-28290127)
chr5 (51-127)||(20266327-20266404)
chr5 (25-89)||(39083455-39083520)
chr5 (25-99)||(2864839-2864915)
chr5 (25-99)||(5819014-5819090)
chr5 (23-74)||(16018969-16019021)
chr5 (29-171)||(38900657-38900800)
chr5 (9-44)||(8461071-8461106)
chr5 (9-99)||(8647523-8647614)
chr5 (9-99)||(19359221-19359312)
chr5 (9-43)||(164560-164594)
chr5 (9-43)||(2865124-2865158)
chr5 (9-55)||(18183338-18183384)
chr5 (25-74)||(24331672-24331722)
chr5 (9-55)||(24331929-24331975)
chr5 (23-99)||(25000471-25000549)
chr5 (25-74)||(29454851-29454901)
chr5 (9-171)||(32697593-32697759)
chr5 (9-89)||(19291452-19291533)
chr5 (90-171)||(28595193-28595274)
chr5 (25-171)||(4967155-4967304)
chr5 (26-89)||(8419008-8419072)
chr5 (25-99)||(18183055-18183131)
chr5 (107-171)||(20260938-20261002)
chr5 (107-159)||(22651780-22651832)
chr5 (9-99)||(5819298-5819389)
chr5 (25-71)||(8461315-8461362)
chr5 (51-125)||(14464929-14465004)
chr5 (13-43)||(14215616-14215646)
chr5 (25-74)||(15709353-15709403)
chr5 (9-39)||(16018733-16018763)
chr5 (25-74)||(19359520-19359570)
chr5 (9-55)||(24325580-24325626)
chr5 (9-55)||(24362205-24362251)
chr5 (25-89)||(14340793-14340858)
chr5 (9-54)||(15372242-15372287)
chr5 (25-99)||(8647822-8647898)
chr5 (9-171)||(15029679-15029842)
[»] chr2 (59 HSPs)
chr2 (9-171)||(28143400-28143562)
chr2 (27-171)||(31797166-31797310)
chr2 (20-171)||(14942225-14942379)
chr2 (46-171)||(2190482-2190609)
chr2 (9-171)||(11540008-11540171)
chr2 (25-127)||(33920669-33920772)
chr2 (25-171)||(42192253-42192400)
chr2 (25-127)||(43160066-43160170)
chr2 (11-127)||(4355812-4355929)
chr2 (9-171)||(42192612-42192776)
chr2 (25-89)||(18450926-18450991)
chr2 (9-127)||(9330164-9330284)
chr2 (25-127)||(15550730-15550834)
chr2 (8-86)||(18451199-18451277)
chr2 (9-89)||(5560920-5561001)
chr2 (9-127)||(4808936-4809055)
chr2 (25-127)||(13399479-13399582)
chr2 (25-99)||(43058717-43058792)
chr2 (9-127)||(43216079-43216198)
chr2 (9-159)||(11539662-11539814)
chr2 (9-127)||(16175719-16175839)
chr2 (9-55)||(40027270-40027316)
chr2 (11-99)||(11090606-11090695)
chr2 (16-99)||(26538454-26538539)
chr2 (9-89)||(33920981-33921062)
chr2 (9-159)||(62982-63133)
chr2 (25-99)||(7446730-7446806)
chr2 (25-159)||(16953320-16953455)
chr2 (9-120)||(32418221-32418333)
chr2 (25-99)||(40815430-40815506)
chr2 (26-89)||(43160397-43160461)
chr2 (9-99)||(239437-239528)
chr2 (12-55)||(14432272-14432315)
chr2 (9-99)||(40815714-40815805)
chr2 (9-55)||(1978238-1978284)
chr2 (9-121)||(4356126-4356239)
chr2 (12-89)||(6949547-6949625)
chr2 (25-74)||(14432525-14432575)
chr2 (9-127)||(38008007-38008127)
chr2 (9-43)||(43058475-43058509)
chr2 (25-121)||(44219707-44219804)
chr2 (9-89)||(63328-63409)
chr2 (26-74)||(3025848-3025897)
chr2 (26-74)||(8425465-8425514)
chr2 (9-89)||(20128107-20128188)
chr2 (9-41)||(3025609-3025641)
chr2 (25-99)||(22374709-22374785)
chr2 (25-71)||(239736-239783)
chr2 (26-99)||(1978494-1978569)
chr2 (16-55)||(8425736-8425775)
chr2 (9-99)||(26538182-26538273)
chr2 (9-89)||(13315591-13315673)
chr2 (9-121)||(38008321-38008434)
chr2 (11-88)||(43215805-43215883)
chr2 (9-89)||(13399790-13399871)
chr2 (25-66)||(22445759-22445800)
chr2 (76-159)||(25336037-25336121)
chr2 (25-99)||(28616998-28617074)
chr2 (25-99)||(40027524-40027600)
[»] scaffold0007 (5 HSPs)
scaffold0007 (9-171)||(205738-205900)
scaffold0007 (20-103)||(205031-205115)
scaffold0007 (20-103)||(205461-205544)
scaffold0007 (85-171)||(210784-210870)
scaffold0007 (8-55)||(64432-64479)
[»] chr3 (91 HSPs)
chr3 (9-171)||(36701466-36701629)
chr3 (9-159)||(27200062-27200212)
chr3 (25-172)||(2323391-2323538)
chr3 (9-159)||(55192143-55192293)
chr3 (9-171)||(49407809-49407971)
chr3 (9-171)||(50900898-50901060)
chr3 (9-127)||(37847190-37847308)
chr3 (9-159)||(37075711-37075864)
chr3 (9-172)||(27199714-27199878)
chr3 (25-171)||(50900545-50900692)
chr3 (16-157)||(8874063-8874205)
chr3 (9-172)||(43222402-43222566)
chr3 (19-159)||(49408163-49408302)
chr3 (25-171)||(52237203-52237350)
chr3 (9-171)||(25534903-25535067)
chr3 (25-89)||(8873786-8873850)
chr3 (9-127)||(36701163-36701284)
chr3 (15-89)||(33412383-33412457)
chr3 (9-121)||(50662782-50662895)
chr3 (25-171)||(40839038-40839185)
chr3 (9-127)||(51828014-51828133)
chr3 (25-127)||(52236873-52236976)
chr3 (25-171)||(40275106-40275255)
chr3 (25-172)||(37076060-37076208)
chr3 (25-99)||(5137365-5137441)
chr3 (25-99)||(26837445-26837521)
chr3 (25-99)||(37727314-37727390)
chr3 (9-171)||(40275464-40275626)
chr3 (9-127)||(46013479-46013598)
chr3 (25-171)||(55389618-55389765)
chr3 (9-99)||(5137065-5137156)
chr3 (9-99)||(37727014-37727105)
chr3 (9-99)||(41046785-41046876)
chr3 (9-127)||(49720428-49720547)
chr3 (9-55)||(24300925-24300971)
chr3 (25-74)||(31778764-31778814)
chr3 (9-55)||(39555946-39555992)
chr3 (25-171)||(43222775-43222923)
chr3 (9-159)||(46013792-46013944)
chr3 (11-159)||(51472880-51473029)
chr3 (9-89)||(32730759-32730840)
chr3 (9-89)||(47431792-47431873)
chr3 (9-89)||(49951916-49951997)
chr3 (25-89)||(51828343-51828408)
chr3 (9-89)||(55389967-55390048)
chr3 (25-99)||(22424899-22424975)
chr3 (25-99)||(24300641-24300717)
chr3 (9-49)||(30104617-30104657)
chr3 (25-99)||(32535044-32535120)
chr3 (9-127)||(34105018-34105139)
chr3 (25-72)||(39555691-39555739)
chr3 (25-99)||(41047083-41047159)
chr3 (25-99)||(43973824-43973900)
chr3 (25-171)||(52375717-52375864)
chr3 (9-170)||(330206-330368)
chr3 (9-99)||(25853596-25853687)
chr3 (9-44)||(26274936-26274971)
chr3 (8-89)||(2051394-2051476)
chr3 (11-49)||(20840696-20840734)
chr3 (23-99)||(29801798-29801876)
chr3 (12-89)||(40838747-40838825)
chr3 (25-121)||(44676858-44676955)
chr3 (25-127)||(51828596-51828700)
chr3 (25-89)||(14654577-14654642)
chr3 (9-89)||(51473225-51473306)
chr3 (25-99)||(4275748-4275824)
chr3 (25-99)||(17464576-17464652)
chr3 (25-99)||(20840945-20841021)
chr3 (25-99)||(23644849-23644925)
chr3 (25-72)||(25853347-25853395)
chr3 (25-99)||(27393746-27393822)
chr3 (25-99)||(30098147-30098223)
chr3 (9-89)||(34104733-34104813)
chr3 (25-127)||(38535681-38535784)
chr3 (25-127)||(44676529-44676632)
chr3 (25-127)||(52375384-52375487)
chr3 (61-127)||(12141113-12141180)
chr3 (9-44)||(17464860-17464895)
chr3 (9-99)||(23644547-23644638)
chr3 (9-44)||(26837725-26837760)
chr3 (11-159)||(2044296-2044445)
chr3 (25-171)||(22370609-22370757)
chr3 (9-55)||(27393946-27393992)
chr3 (9-55)||(31779021-31779067)
chr3 (9-121)||(43678358-43678471)
chr3 (98-171)||(33412614-33412687)
chr3 (9-89)||(41998325-41998406)
chr3 (9-89)||(51828910-51828991)
chr3 (25-99)||(26274652-26274728)
chr3 (11-55)||(32535330-32535374)
chr3 (25-127)||(32730446-32730549)
[»] chr6 (37 HSPs)
chr6 (10-159)||(35163557-35163708)
chr6 (23-159)||(32836032-32836163)
chr6 (9-159)||(32836367-32836517)
chr6 (46-147)||(11523721-11523824)
chr6 (16-99)||(10900024-10900109)
chr6 (56-159)||(35163209-35163312)
chr6 (46-127)||(33095771-33095853)
chr6 (46-171)||(835407-835532)
chr6 (9-127)||(31073512-31073631)
chr6 (25-121)||(5114531-5114628)
chr6 (9-89)||(31573820-31573901)
chr6 (9-49)||(11445123-11445163)
chr6 (11-55)||(12935528-12935572)
chr6 (9-127)||(31574095-31574214)
chr6 (26-127)||(5120856-5120958)
chr6 (9-99)||(10900299-10900390)
chr6 (16-74)||(11276701-11276760)
chr6 (8-55)||(20741230-20741277)
chr6 (9-55)||(28472766-28472812)
chr6 (9-55)||(29859955-29860001)
chr6 (25-89)||(20741485-20741550)
chr6 (9-89)||(25472382-25472463)
chr6 (9-89)||(28636566-28636647)
chr6 (9-49)||(2322588-2322628)
chr6 (25-99)||(11445371-11445447)
chr6 (25-99)||(12935242-12935318)
chr6 (25-72)||(22219737-22219785)
chr6 (9-127)||(25468906-25469027)
chr6 (9-99)||(11276951-11277042)
chr6 (9-99)||(15828010-15828101)
chr6 (46-89)||(22534165-22534208)
chr6 (11-49)||(1149802-1149840)
chr6 (9-55)||(18257267-18257313)
chr6 (12-89)||(29891453-29891531)
chr6 (25-74)||(31470426-31470476)
chr6 (51-129)||(28636347-28636425)
chr6 (9-66)||(29891199-29891256)
[»] chr7 (57 HSPs)
chr7 (9-171)||(35578912-35579074)
chr7 (25-171)||(34595158-34595305)
chr7 (26-159)||(9393761-9393894)
chr7 (12-159)||(39136711-39136858)
chr7 (9-159)||(35579256-35579406)
chr7 (16-159)||(9394108-9394251)
chr7 (46-172)||(33880632-33880759)
chr7 (9-120)||(34594647-34594758)
chr7 (27-160)||(4477726-4477860)
chr7 (47-171)||(49064047-49064171)
chr7 (16-89)||(32427397-32427470)
chr7 (38-135)||(45815465-45815563)
chr7 (9-121)||(25637568-25637681)
chr7 (9-121)||(9181595-9181708)
chr7 (9-127)||(28687869-28687988)
chr7 (25-74)||(19830804-19830854)
chr7 (9-127)||(7732545-7732664)
chr7 (25-127)||(16081685-16081788)
chr7 (25-99)||(19590909-19590985)
chr7 (9-89)||(33880955-33881035)
chr7 (9-127)||(11973772-11973891)
chr7 (9-99)||(19590610-19590701)
chr7 (9-99)||(19830505-19830596)
chr7 (9-99)||(37786852-37786943)
chr7 (25-127)||(26026374-26026478)
chr7 (27-99)||(37787153-37787227)
chr7 (9-159)||(48247961-48248113)
chr7 (11-99)||(2659211-2659300)
chr7 (25-89)||(16081394-16081459)
chr7 (9-89)||(27245299-27245380)
chr7 (26-73)||(32004726-32004774)
chr7 (11-55)||(32004985-32005029)
chr7 (9-99)||(29100220-29100311)
chr7 (26-99)||(35288988-35289063)
chr7 (9-99)||(38858728-38858819)
chr7 (25-98)||(38859025-38859100)
chr7 (9-127)||(9181779-9181901)
chr7 (9-159)||(14311340-14311492)
chr7 (9-127)||(25637254-25637374)
chr7 (62-171)||(5334243-5334352)
chr7 (25-89)||(24929689-24929754)
chr7 (9-66)||(26048067-26048124)
chr7 (11-99)||(34534162-34534251)
chr7 (9-89)||(48247686-48247767)
chr7 (28-171)||(28687606-28687750)
chr7 (25-159)||(39388652-39388789)
chr7 (25-74)||(4641828-4641878)
chr7 (9-121)||(5745702-5745815)
chr7 (9-121)||(26026688-26026801)
chr7 (9-121)||(27245574-27245687)
chr7 (25-74)||(34533902-34533952)
chr7 (25-89)||(786878-786943)
chr7 (9-89)||(11971433-11971514)
chr7 (61-127)||(45815398-45815466)
chr7 (25-99)||(2658924-2659000)
chr7 (25-171)||(2758084-2758231)
chr7 (25-99)||(29099935-29100011)
[»] chr4 (73 HSPs)
chr4 (9-170)||(35193322-35193483)
chr4 (9-169)||(17503989-17504149)
chr4 (25-171)||(229545-229692)
chr4 (9-159)||(40160119-40160269)
chr4 (25-127)||(18965197-18965300)
chr4 (9-89)||(17504329-17504410)
chr4 (20-159)||(24336144-24336284)
chr4 (26-159)||(24335786-24335920)
chr4 (37-172)||(40160489-40160624)
chr4 (9-171)||(229174-229337)
chr4 (9-127)||(34807173-34807293)
chr4 (38-159)||(35193702-35193823)
chr4 (23-99)||(46193490-46193568)
chr4 (9-89)||(14439923-14440004)
chr4 (25-116)||(18965522-18965614)
chr4 (9-127)||(28465138-28465257)
chr4 (12-159)||(33689854-33690001)
chr4 (9-127)||(46737025-46737144)
chr4 (9-127)||(54440628-54440745)
chr4 (9-55)||(12503805-12503851)
chr4 (25-121)||(12593087-12593184)
chr4 (9-121)||(14440198-14440311)
chr4 (25-74)||(22434290-22434340)
chr4 (9-55)||(22434547-22434593)
chr4 (70-171)||(23986533-23986635)
chr4 (9-55)||(45082560-45082606)
chr4 (25-74)||(48526565-48526615)
chr4 (25-89)||(12593409-12593474)
chr4 (9-89)||(16214865-16214946)
chr4 (9-89)||(21034606-21034687)
chr4 (9-89)||(35643662-35643743)
chr4 (25-89)||(45838933-45838998)
chr4 (25-89)||(46736750-46736815)
chr4 (25-99)||(11153231-11153307)
chr4 (25-99)||(12503521-12503597)
chr4 (26-89)||(15523331-15523395)
chr4 (25-99)||(20470895-20470971)
chr4 (25-99)||(45082808-45082884)
chr4 (8-55)||(15523602-15523649)
chr4 (9-99)||(22170306-22170397)
chr4 (26-99)||(25938056-25938131)
chr4 (9-99)||(33109769-33109860)
chr4 (25-99)||(51021180-51021255)
chr4 (25-127)||(19528926-19529030)
chr4 (25-127)||(24851851-24851955)
chr4 (9-55)||(25937800-25937846)
chr4 (9-127)||(34789752-34789872)
chr4 (9-43)||(51020939-51020973)
chr4 (9-89)||(6616768-6616849)
chr4 (9-74)||(18751971-18752036)
chr4 (25-89)||(26974379-26974444)
chr4 (9-89)||(41608470-41608551)
chr4 (10-121)||(56077695-56077807)
chr4 (25-99)||(12234713-12234789)
chr4 (25-99)||(25447332-25447408)
chr4 (25-99)||(54995154-54995230)
chr4 (9-99)||(4219642-4219733)
chr4 (9-99)||(12234414-12234505)
chr4 (11-89)||(24851560-24851639)
chr4 (25-118)||(34807525-34807619)
chr4 (9-99)||(46193774-46193865)
chr4 (9-44)||(48526336-48526371)
chr4 (9-55)||(2118665-2118711)
chr4 (9-55)||(11153516-11153562)
chr4 (9-121)||(34789445-34789558)
chr4 (85-171)||(51309952-51310038)
chr4 (9-121)||(54440939-54441052)
chr4 (16-49)||(38962195-38962228)
chr4 (25-99)||(2118378-2118454)
chr4 (25-99)||(4219943-4220019)
chr4 (15-55)||(25447611-25447651)
chr4 (26-89)||(28166099-28166163)
chr4 (9-127)||(45838604-45838723)
[»] chr1 (73 HSPs)
chr1 (9-171)||(39485078-39485240)
chr1 (9-169)||(17088161-17088326)
chr1 (9-171)||(29021234-29021398)
chr1 (28-171)||(23526671-23526815)
chr1 (23-159)||(44802555-44802692)
chr1 (9-156)||(9833522-9833670)
chr1 (15-171)||(17088516-17088672)
chr1 (9-171)||(50926611-50926774)
chr1 (25-159)||(48173773-48173909)
chr1 (9-171)||(50926243-50926408)
chr1 (36-171)||(45048533-45048668)
chr1 (9-159)||(45048180-45048330)
chr1 (46-171)||(44291314-44291442)
chr1 (29-158)||(44291701-44291831)
chr1 (9-158)||(29020906-29021056)
chr1 (16-99)||(29307317-29307402)
chr1 (9-89)||(9992250-9992331)
chr1 (25-159)||(52335896-52336031)
chr1 (11-127)||(8230013-8230130)
chr1 (9-127)||(1837562-1837681)
chr1 (9-92)||(37505438-37505522)
chr1 (25-171)||(44954612-44954759)
chr1 (9-99)||(5962947-5963038)
chr1 (9-99)||(15173181-15173272)
chr1 (9-99)||(50970647-50970738)
chr1 (23-99)||(17433597-17433675)
chr1 (9-55)||(21856412-21856458)
chr1 (9-121)||(21938626-21938739)
chr1 (9-55)||(29869750-29869796)
chr1 (25-159)||(6224722-6224859)
chr1 (16-99)||(9019338-9019423)
chr1 (25-89)||(17641750-17641815)
chr1 (51-171)||(23526942-23527063)
chr1 (25-159)||(30786796-30786932)
chr1 (9-89)||(34555750-34555831)
chr1 (25-72)||(5962691-5962739)
chr1 (25-99)||(18984503-18984579)
chr1 (25-99)||(21856127-21856203)
chr1 (9-44)||(8678911-8678946)
chr1 (8-55)||(33144287-33144334)
chr1 (11-49)||(4636108-4636146)
chr1 (9-127)||(10278605-10278725)
chr1 (25-121)||(10278936-10279030)
chr1 (9-55)||(17433346-17433392)
chr1 (25-74)||(33144028-33144078)
chr1 (27-99)||(50970363-50970437)
chr1 (25-89)||(8229735-8229800)
chr1 (26-121)||(9992542-9992638)
chr1 (25-89)||(16299068-16299133)
chr1 (9-127)||(443921-444040)
chr1 (25-171)||(2868094-2868241)
chr1 (16-99)||(5540194-5540278)
chr1 (25-99)||(15173478-15173554)
chr1 (16-99)||(15646571-15646655)
chr1 (9-127)||(16298739-16298858)
chr1 (25-99)||(17112366-17112442)
chr1 (16-99)||(29307038-29307122)
chr1 (25-99)||(29870003-29870079)
chr1 (25-127)||(34555436-34555541)
chr1 (25-99)||(39154404-39154480)
chr1 (26-89)||(50305169-50305233)
chr1 (26-99)||(4636356-4636431)
chr1 (9-99)||(18984204-18984295)
chr1 (12-89)||(1744422-1744500)
chr1 (109-171)||(25274769-25274831)
chr1 (9-127)||(29438987-29439107)
chr1 (25-116)||(15646260-15646353)
chr1 (25-89)||(23340278-23340343)
chr1 (25-66)||(30787158-30787199)
chr1 (25-89)||(44954321-44954386)
chr1 (25-99)||(8678626-8678702)
chr1 (25-127)||(37421217-37421322)
chr1 (9-127)||(44582114-44582233)
[»] scaffold0108 (2 HSPs)
scaffold0108 (9-171)||(15126-15288)
scaffold0108 (46-172)||(15506-15632)
[»] chr8 (47 HSPs)
chr8 (11-171)||(28876916-28877077)
chr8 (10-81)||(18805266-18805337)
chr8 (9-171)||(28877260-28877422)
chr8 (9-171)||(35427182-35427345)
chr8 (9-159)||(7910986-7911137)
chr8 (9-127)||(28254796-28254915)
chr8 (25-127)||(599589-599692)
chr8 (9-159)||(9796751-9796902)
chr8 (25-127)||(41260647-41260750)
chr8 (9-99)||(44831614-44831705)
chr8 (9-127)||(18049961-18050080)
chr8 (9-121)||(5731182-5731295)
chr8 (9-55)||(12571994-12572040)
chr8 (9-55)||(13224770-13224816)
chr8 (9-125)||(16578466-16578583)
chr8 (9-159)||(18049615-18049767)
chr8 (12-127)||(26252866-26252982)
chr8 (9-89)||(28254521-28254602)
chr8 (25-99)||(13225023-13225099)
chr8 (25-171)||(42035785-42035932)
chr8 (9-55)||(4630161-4630207)
chr8 (25-127)||(6115496-6115600)
chr8 (9-55)||(33328288-33328334)
chr8 (25-74)||(33743032-33743082)
chr8 (9-171)||(34799092-34799256)
chr8 (25-89)||(5730912-5730977)
chr8 (25-89)||(18428147-18428212)
chr8 (25-99)||(9928994-9929070)
chr8 (25-99)||(11656841-11656917)
chr8 (25-99)||(12572235-12572311)
chr8 (25-99)||(19176375-19176451)
chr8 (85-172)||(7910628-7910714)
chr8 (9-44)||(9930026-9930061)
chr8 (46-127)||(16578165-16578247)
chr8 (9-99)||(19176659-19176750)
chr8 (25-98)||(44831333-44831408)
chr8 (70-128)||(10047068-10047126)
chr8 (25-89)||(599884-599949)
chr8 (25-89)||(9797112-9797177)
chr8 (11-99)||(33743290-33743379)
chr8 (9-66)||(35163817-35163874)
chr8 (25-89)||(35426908-35426973)
chr8 (25-89)||(35693965-35694030)
chr8 (9-49)||(9178005-9178045)
chr8 (25-99)||(33328524-33328600)
chr8 (25-127)||(34799469-34799572)
chr8 (25-99)||(41681518-41681594)
[»] scaffold0712 (2 HSPs)
scaffold0712 (25-127)||(6777-6885)
scaffold0712 (26-121)||(6455-6551)
[»] scaffold0709 (2 HSPs)
scaffold0709 (25-127)||(6795-6903)
scaffold0709 (26-121)||(6473-6569)
[»] scaffold0273 (1 HSPs)
scaffold0273 (9-99)||(4576-4667)
[»] scaffold0027 (2 HSPs)
scaffold0027 (16-99)||(42254-42339)
scaffold0027 (9-55)||(42528-42574)
[»] scaffold0157 (2 HSPs)
scaffold0157 (9-55)||(16626-16672)
scaffold0157 (25-99)||(16880-16956)
[»] scaffold0097 (1 HSPs)
scaffold0097 (9-171)||(46279-46443)
[»] scaffold0019 (1 HSPs)
scaffold0019 (9-55)||(134042-134088)
[»] scaffold0951 (2 HSPs)
scaffold0951 (11-99)||(1752-1841)
scaffold0951 (25-99)||(2051-2127)
[»] scaffold0295 (2 HSPs)
scaffold0295 (9-99)||(4878-4969)
scaffold0295 (25-69)||(5179-5224)
[»] scaffold0021 (1 HSPs)
scaffold0021 (46-127)||(159288-159370)
[»] scaffold0025 (1 HSPs)
scaffold0025 (9-89)||(78412-78493)
[»] scaffold1223 (2 HSPs)
scaffold1223 (16-74)||(1116-1175)
scaffold1223 (9-99)||(838-928)
[»] scaffold0432 (1 HSPs)
scaffold0432 (9-44)||(10242-10277)
[»] scaffold0417 (2 HSPs)
scaffold0417 (9-44)||(10762-10797)
scaffold0417 (25-99)||(11007-11083)


Alignment Details
Target: chr5 (Bit Score: 121; Significance: 4e-62; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 32305991 - 32305815
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaacatgataatttaggtatgatt 110  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| | ||||    
T  32305991 catagcgggtaagtctaaaactgtcatttctctgtgtttctggagttgaaaataagaggtaggactaaaactgcaaaaacatgatagtttagggacgatt 32305892  T
Q  111 ttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaaagggttggcatgaggg 187  Q
    ||||||||||| ||||| | |||||||||||  ||||||| |||||||| |||||||||||||||||||||||||||    
T  32305891 ttgttcgatttaaaagaggtagaacaattttcgtgagctgatcaaaatgcgatgaccaaaaagggttggcatgaggg 32305815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 172
Target Start/End: Complemental strand, 10721945 - 10721798
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgca-aaaacatgataatttaggtatgattttgttcgatttga 123  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||| | |||||||||||||||||    
T  10721945 ctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtttagg-acgattttgttcgatttga 10721847  T
Q  124 aagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaaa 172  Q
    ||||  ||  || |||||  ||||||||||||||||||| |||||||||    
T  10721846 aagagacaagaccattttcgtgagctggtcaaaatgtgaggaccaaaaa 10721798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 172
Target Start/End: Original strand, 16752955 - 16753104
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc---aaaaacatgataatttaggtatgattttgttcgattt 121  Q
    ||||||||| ||||| |||| ||||||||||||||||||||||| ||||  |||||||||   ||||||||||||||||||| ||| ||| |||||||||    
T  16752955 ctaaaactgccatttttctgcgtttctggagttgaaaataggagttaggtctaaaactgcaaaaaaaacatgataatttagg-atggtttcgttcgattt 16753053  T
Q  122 gaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaaa 172  Q
    |||||| ||||||| |||||  |||| ||||||||||| ||||||||||||    
T  16753054 gaaagaggcagaaccattttcgtgagttggtcaaaatgcgatgaccaaaaa 16753104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 25 - 171
Target Start/End: Complemental strand, 28495003 - 28494857
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgca-aaaacatgataatttaggtatgattttgttcgatttga 123  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||| |   |||||||||||||||    
T  28495003 ctaaaattgtcacttctctgcgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtttagg-acagttttgttcgatttga 28494905  T
Q  124 aagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    |||| ||||||| |||||  ||| ||||||||||||| | ||||||||    
T  28494904 aagaggcagaaccattttcctgaactggtcaaaatgtaaggaccaaaa 28494857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 41834443 - 41834592
Alignment:
Q  23 gtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc--aaaaacatgataatttaggtatgattttgttcgatt 120  Q
    |||||||||||||||||||||| |||||  |||||||||||||||||||||| |||||||||  |||||||||||| |||||| | | |||||||||||     
T  41834443 gtctaaaactgtcatttctctgcgtttcaagagttgaaaataggaggtaggactaaaactgcaaaaaaacatgatagtttagg-acggttttgttcgatc 41834541  T
Q  121 tgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||||| |||| || |||||  |||||||||||||||| || ||||||||    
T  41834542 tgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaa 41834592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 16752757 - 16752607
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgca-aaaacatgataatttaggtatg 107  Q
    |||||||||||||||||||||||| |||||||| || |||| ||||||||||||||||||||| ||  ||||||||| ||||||| ||| |||| | | |    
T  16752757 agcatagggggtaggtctaaaactatcatttctttgcgtttatggagttgaaaataggaggtatgacaaaaactgcaaaaaacat-atagtttatggacg 16752659  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    ||||||||||||||||||||||||  |  |||||  ||||||||||||||||    
T  16752658 attttgttcgatttgaaagaagcatgatcattttcgtgagctggtcaaaatg 16752607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 159
Target Start/End: Complemental strand, 27307220 - 27307086
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgca-aaaacatgataatttaggtatgattttgttcgatttga 123  Q
    ||||||||||||||||| || |||||||||||||||||||||||||| || |||||||||| ||||||||||| |||||| |||||||||||| ||||||    
T  27307220 ctaaaactgtcatttctatgcgtttctggagttgaaaataggaggtaagactaaaactgcaaaaaacatgatagtttagg-atgattttgttcaatttga 27307122  T
Q  124 aagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    ||||| ||  || ||||| || || |||||||||||    
T  27307121 aagaaacatgaccattttcataagttggtcaaaatg 27307086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 32305814 - 32305742
Alignment:
Q  167 caaaaagggttggcatgagggtaaagctattaaggccgttttcttaggcctcttctagaaagggtttgatggc 239  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  32305814 caaaaagggttggcatgagggtaaagctactaagaccgttttcttaggcctcttctagaaagggtttgatggc 32305742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 22651521 - 22651371
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaacatgataatttaggtatg 107  Q
    |||||||| ||| || ||||||||| ||||| | || ||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| | |||    
T  22651521 agcataggtggttggactaaaactgccatttttgtgcgtttctggagttgaaaataaggaggtaggactaaaactgcaaaaacatgatagtttaaggatg 22651422  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaat 158  Q
     ||||||| ||||| ||||| |||  || ||||   |||||||||||||||    
T  22651421 gttttgtttgatttaaaagaggcatgaccatttccgtgagctggtcaaaat 22651371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 27307428 - 27307581
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc----aaaaacatgataatttaggt 104  Q
    |||||||||||| | ||||||| |||||||||||||  |||||||||||||||||||||||||||| ||||||| |    |||||||| ||| |||| |     
T  27307428 agcatagggggtggatctaaaaatgtcatttctctgcatttctggagttgaaaataggaggtaggactaaaactacaaaaaaaaacat-atagtttatgg 27307526  T
Q  105 atgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    | | ||||||||||||||||||| | ||||| |||||  ||| ||||||||||||    
T  27307527 acggttttgttcgatttgaaagagggagaaccattttcgtgaactggtcaaaatg 27307581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 28495211 - 28495291
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaa 89  Q
    |||||| | ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||    
T  28495211 agcatatgaggtaggtctaaaactatcatttctctgcggttctggagttgaaaataggaggtaggactaaaactgcaaaaa 28495291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 17260454 - 17260352
Alignment:
Q  57 tgaaaataggaggtaggaataaaactgcaaaaa-catgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaa 155  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||| | |  |||||||||||||||||||| ||||||| |||||| ||| ||| ||||    
T  17260454 tgaaaatagggggtaggactaaaactgcaaaaaacatgataatttatggacaattttgttcgatttgaaagatgcagaaccatttttgtgaactgatcaa 17260355  T
Q  156 aat 158  Q
    |||    
T  17260354 aat 17260352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 4966991 - 4966829
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc-aaaaacatgataatttaggtatg 107  Q
    |||||||| ||| || | ||||||||||||||| ||  ||||| |||||| ||||||| | || || ||||||||| |||||||| ||| |||||| | |    
T  4966991 agcataggtggttggcccaaaactgtcatttctgtgcatttctagagttggaaataggggatatgactaaaactgctaaaaacat-atagtttagggacg 4966893  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    |||||||||||||| ||||| |||| || |||||  |||| ||||||||||| || ||||||||    
T  4966892 attttgttcgatttaaaagaggcagtactattttcgtgagttggtcaaaatgcgaggaccaaaa 4966829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 28289858 - 28289741
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaact-gcaaaaacatgataatttaggtatga 108  Q
    |||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| ||||| ||||||| | |||||||| |||||||||| | ||    
T  28289858 cataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactggaaaaaacat-ataatttagggacga 28289760  T
Q  109 ttttgttcgatttgaaaga 127  Q
    ||||||||||||| |||||    
T  28289759 ttttgttcgatttaaaaga 28289741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 159
Target Start/End: Complemental strand, 13557140 - 13557017
Alignment:
Q  36 atttctctgtgtttctggagttgaaaataggaggtaggaataaaactgca-aaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaa 134  Q
    ||||||||| ||||||| |||| |||||| || |||||| |||||||||| ||||||||||| |||| | | ||||||||| ||||||||||| |||  |    
T  13557140 atttctctgcgtttctgcagttcaaaataagatgtaggactaaaactgcaaaaaacatgatagtttaag-acgattttgtttgatttgaaagaggcatga 13557042  T
Q  135 caatttttatgagctggtcaaaatg 159  Q
    | |||||  ||||||||||||||||    
T  13557041 ccattttcgtgagctggtcaaaatg 13557017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 159
Target Start/End: Original strand, 21371082 - 21371217
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||| | || ||||||||||||| ||||| |||| ||||| ||||| ||| |||||||| ||| |||||| | ||||||||| |||||     
T  21371082 ctaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaaacat-atagtttagggacgattttgtttgattta 21371180  T
Q  123 aaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    ||||| | || || | ||||||||| |||||||||||    
T  21371181 aaagaggtaggaccaattttatgagttggtcaaaatg 21371217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 164350 - 164276
Alignment:
Q  26 taaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggaataaaactgcaaaaacatgataatt 99  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||||||||  |||| ||||| || |||||||||    
T  164350 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaatgataatt 164276  T

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Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 14215402 - 14215352
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 74  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  14215402 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagga 14215352  T

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Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 15709146 - 15709100
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  15709146 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 15709100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 18150109 - 18150213
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc--aaaaacatgataatttaggtatgattttgttcgattt 121  Q
    ||||||| ||||||| | || ||||||||||||| ||||| |||| ||||| |||||||||  |||||||| ||| |||||| |||||||||||||||||    
T  18150109 ctaaaacggtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacat-atagtttagggatgattttgttcgattt 18150207  T
Q  122 gaaaga 127  Q
     |||||    
T  18150208 aaaaga 18150213  T

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Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 28290030 - 28290127
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgattt 121  Q
    ||||||||||||||||| || ||||||||||||| ||||| |||| ||||| ||||||||| |||||||| ||| |||| | | |||||||||||||||    
T  28290030 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 28290127  T

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Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 20266327 - 20266404
Alignment:
Q  51 tggagttgaaaataggaggtaggaataaaactgcaaaaac-atgataatttaggtatgattttgttcgatttgaaaga 127  Q
    ||||| |||||||||| ||||||| ||||||| ||| ||| |||||| |||||| | |||||||||||||||||||||    
T  20266327 tggaggtgaaaatagggggtaggactaaaactacaacaaccatgatagtttagggacgattttgttcgatttgaaaga 20266404  T

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Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 39083520 - 39083455
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||| || || ||||||||||||||    
T  39083520 ctaaaactgtcatttctgtgtgtttctggagttggaaatatggagatatgactaaaactgcaaaaa 39083455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 2864915 - 2864839
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| |||| ||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  2864915 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 2864839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 5819090 - 5819014
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||| ||  |||| ||||| ||| |||||||||    
T  5819090 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataatt 5819014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 16018969 - 16019021
Alignment:
Q  23 gtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 74  Q
    |||||||||||||||||||||| |||||||||| || ||||||||||||||||    
T  16018969 gtctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtagga 16019021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 171
Target Start/End: Complemental strand, 38900800 - 38900657
Alignment:
Q  29 aactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa-catgataatttaggtatgattttgttcgatttgaaag 126  Q
    ||||||||||| | |  |||| |||||||| ||||||| || ||||| |||||||||||||| ||| |||||||||| | ||||||||||||||| ||||    
T  38900800 aactgtcatttatgtacgtttatggagttggaaatagggagataggactaaaactgcaaaaaacat-ataatttagggacgattttgttcgatttaaaag 38900702  T
Q  127 aagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    | | || |  |||||  |||| ||||||||||| || ||||||||    
T  38900701 aggtaggatcattttcgtgagttggtcaaaatgcgaggaccaaaa 38900657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 8461106 - 8461071
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctg 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  8461106 agcatagggggtaggtctaaaactgtcatttctctg 8461071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 8647614 - 8647523
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  8647614 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 8647523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 19359312 - 19359221
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||||||||||||| |||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  19359312 agcatagggggtaggtctagaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 19359221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 164560 - 164594
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctct 43  Q
    |||||||||||||||||||||||||||||||||||    
T  164560 agcatagggggtaggtctaaaactgtcatttctct 164594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 2865124 - 2865158
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctct 43  Q
    |||||||||||||||||||||||||||||||||||    
T  2865124 agcatagggggtaggtctaaaactgtcatttctct 2865158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 18183338 - 18183384
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||    
T  18183338 agcatagggggtaggtctaaaactgttatttctctgcgtttttggag 18183384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 24331722 - 24331672
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 74  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  24331722 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctagga 24331672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 24331929 - 24331975
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||| ||||||||||||||||||||||||| |||| |||||    
T  24331929 agcataggggataggtctaaaactgtcatttctctgcgtttttggag 24331975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 25000471 - 25000549
Alignment:
Q  23 gtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||| |||| ||||| ||||||||||||||| |||  |||| ||||| ||| |||||||||    
T  25000471 gtctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataatt 25000549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 29454901 - 29454851
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 74  Q
    |||||||| ||||||||||| |||||||||| |||||||||||||||||||    
T  29454901 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtagga 29454851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 32697593 - 32697759
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaa----acatgataatttagg 103  Q
    |||||||| ||| || |||||  |||||||||| |||||||||||||||| ||||||| |||||  | |||||||||||||    |||| ||| ||||||    
T  32697593 agcataggtggttggactaaatttgtcatttctgtgtgtttctggagttggaaatagggaggtatcactaaaactgcaaaataaaacat-atagtttagg 32697691  T
Q  104 tatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
     | |||| |||||||||| ||||| | || || | |||  |||| |||||||||||  ||||||||||    
T  32697692 gacgattctgttcgatttaaaagaggtaggaccaatttcgtgagttggtcaaaatgcaatgaccaaaa 32697759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 19291533 - 19291452
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaat-aggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||||| || |||| |||||||| |||| ||||| || || ||||||||||||||    
T  19291533 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaataaggagataagactaaaactgcaaaaa 19291452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 28595274 - 28595193
Alignment:
Q  90 catgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||||| |||||| | ||||||||||| |||||||||||||  || |||||| | |||||||||||||  || ||||||||    
T  28595274 catgatagtttagggacgattttgttcgttttgaaagaagcatgaccatttttgtaagctggtcaaaatacgaggaccaaaa 28595193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 4967155 - 4967304
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa---catgataatttaggtatgattttgttcgatt 120  Q
    |||||||| |||||| | || |||||| |||||  ||||||| |  ||||| ||||||||||||||   ||| ||| |||||| | ||||||||||||||    
T  4967155 ctaaaactatcatttatgtgcgtttctagagttagaaatagggatataggactaaaactgcaaaaaaaacat-atagtttagggacgattttgttcgatt 4967253  T
Q  121 tgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    | ||||| | |  || |||||| |||| |||||||||||||| ||||||||    
T  4967254 taaaagaggtaagaccatttttgtgagttggtcaaaatgtgaggaccaaaa 4967304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 8419008 - 8419072
Alignment:
Q  26 taaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    ||||| |||||||||| || ||||||||||||| ||||| |||| ||||| ||||||||||||||    
T  8419008 taaaattgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa 8419072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 18183131 - 18183055
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagt-tgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| |||||||| || | ||||||||||||||||  |||| ||||| ||| |||||||||    
T  18183131 ctaaaactgtcatttctctgcgtttctggggtataaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 18183055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 20261002 - 20260938
Alignment:
Q  107 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||||||| ||||||||||| || | || ||||| ||||||| |||||||||||| ||||||||    
T  20261002 gattttgtttgatttgaaagaggcgggaccattttcatgagctagtcaaaatgtgaggaccaaaa 20260938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 159
Target Start/End: Original strand, 22651780 - 22651832
Alignment:
Q  107 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    ||||||||||||||||||| | ||||||| |||||  ||||||||||||||||    
T  22651780 gattttgttcgatttgaaaaaggcagaaccattttcgtgagctggtcaaaatg 22651832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 5819298 - 5819389
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||| |||||||||||||||||| || |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  5819298 agcatagggggtagatctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 5819389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 8461315 - 8461362
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggta 71  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  8461315 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggta 8461362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 14464929 - 14465004
Alignment:
Q  51 tggagttgaaaataggaggtaggaataaaactgcaaaaac-atgataatttaggtatgattttgttcgatttgaaa 125  Q
    ||||| |||||||| | |||| || ||||||||||||||  ||||||||||||| | |||||| ||||||||||||    
T  14464929 tggaggtgaaaataaggggtatgattaaaactgcaaaaaatatgataatttagggacgattttattcgatttgaaa 14465004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 43
Target Start/End: Original strand, 14215616 - 14215646
Alignment:
Q  13 tagggggtaggtctaaaactgtcatttctct 43  Q
    |||||||||||||||||||||||||||||||    
T  14215616 tagggggtaggtctaaaactgtcatttctct 14215646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 15709353 - 15709403
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 74  Q
    |||||||||||||||||||| | || ||||| |||||||||||||||||||    
T  15709353 ctaaaactgtcatttctctgcgcttatggagtttgaaaataggaggtagga 15709403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 39
Target Start/End: Complemental strand, 16018763 - 16018733
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcattt 39  Q
    |||||||||||||||||||||||||||||||    
T  16018763 agcatagggggtaggtctaaaactgtcattt 16018733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 19359520 - 19359570
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 74  Q
    ||||||||| |||||||||  |||||||||| |||||||||||||||||||    
T  19359520 ctaaaactgccatttctctacgtttctggagtttgaaaataggaggtagga 19359570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 24325580 - 24325626
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||| || |||||||||||||||||||||||  ||||||||    
T  24325580 agcataggggataagtctaaaactgtcatttctctgtacttctggag 24325626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 24362205 - 24362251
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||| || |||||||||||||||||||||| |||| |||||    
T  24362205 agcataggggataagtctaaaactgtcatttctctgcgtttttggag 24362251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 14340793 - 14340858
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaat-aggaggtaggaataaaactgcaaaaa 89  Q
    |||||||||||||||||||  |||| |||||||| |||| ||||| ||||| ||||||| ||||||    
T  14340793 ctaaaactgtcatttctctacgtttttggagttggaaataaggagataggactaaaactacaaaaa 14340858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 15372242 - 15372287
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctgga 54  Q
    |||||| | ||||||||||||||||||||||||||| |||| ||||    
T  15372242 agcataagaggtaggtctaaaactgtcatttctctgcgtttttgga 15372287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 8647822 - 8647898
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| |||| ||||| |||||||||| ||||| ||  |||| ||||| ||| |||||||||    
T  8647822 ctaaaactgtcatttctctgcgtttatggagtttgaaaatagaaggtatgacgaaaaatgcaacaaaaatgataatt 8647898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 15029679 - 15029842
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||  ||||| |||| | | | ||||||||| |||||||| ||| |||| | |     
T  15029679 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagtttgaaatagggagatcgaactaaaactgcaaaaaacat-atagtttaaggac 15029777  T
Q  107 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||||||||||||| ||| | | |  || |||||  |||| ||||||||||| || ||||||||    
T  15029778 gattttgttcgatttaaaaaaggtaagaccattttcgtgagttggtcaaaatgggaggaccaaaa 15029842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 4e-56; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 28143400 - 28143562
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaacatgataatttaggtatga 108  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||| | ||    
T  28143400 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggacgtaggactaaaactgcaaaaacatgatagtttagggacga 28143499  T
Q  109 ttttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||||||||||||||||| |||| || |||||  |||||||||||||||| || ||||||||    
T  28143500 ttttgttcgatttgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaa 28143562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 27 - 171
Target Start/End: Original strand, 31797166 - 31797310
Alignment:
Q  27 aaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttgaaa 125  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||| |||||||| ||| |||||| | | |||||||||||||||||    
T  31797166 aaaactgtcatttctctgcgtttctagagttgaaaataggaggtaggactaaaactgcaaaaaacat-atagtttagggacggttttgttcgatttgaaa 31797264  T
Q  126 gaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    || |||  || |||||  ||||||||||||||||||| ||||||||    
T  31797265 gaggcatgaccattttcgtgagctggtcaaaatgtgaggaccaaaa 31797310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 171
Target Start/End: Original strand, 14942225 - 14942379
Alignment:
Q  20 taggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc---aaaaacatgataatttaggtatgattttgttc 116  Q
    ||||||||||||||  |||||||||  ||||||||||||||||||||| |||||| |||||||||   ||||||||||||||||| | |  |||||||||    
T  14942225 taggtctaaaactgcgatttctctgcatttctggagttgaaaataggatgtaggactaaaactgcaaaaaaaacatgataatttatggacaattttgttc 14942324  T
Q  117 gatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    |||||||||||  ||  || |||||  |||||||||||||||| || ||||||||    
T  14942325 gatttgaaagagacaagaccattttcgtgagctggtcaaaatgcgaagaccaaaa 14942379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 171
Target Start/End: Original strand, 2190482 - 2190609
Alignment:
Q  46 gtttctggagttgaaaataggaggtaggaataaaactgcaaaaa--catgataatttaggtatgattttgttcgatttgaaagaagcagaacaattttta 143  Q
    |||| ||||| ||||| | || ||||||| ||||||||||||||  | |||||||||||| | ||||||||||||||||||| | |||| || | |||      
T  2190482 gtttttggagatgaaattcgggggtaggactaaaactgcaaaaaagcgtgataatttagggacgattttgttcgatttgaaaaaggcaggaccaatttcg 2190581  T
Q  144 tgagctggtcaaaatgtgatgaccaaaa 171  Q
    |||||||||||||||| |||||||||||    
T  2190582 tgagctggtcaaaatgcgatgaccaaaa 2190609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 11540008 - 11540171
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||  || || ||||||||| |||||||| ||| |||| | |     
T  11540008 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggatatatgactaaaactgcaaaaaacat-atagtttatggac 11540106  T
Q  107 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||||||||||||| ||||| | || || |||||  |||| ||||||||||| |||||||||||    
T  11540107 gattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgatgaccaaaa 11540171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 33920772 - 33920669
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa-catgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||||| || ||||||||||||||||||| |||| ||||| |||||||||||||| ||| ||| |||||| | |||||||||||||||     
T  33920772 ctaaaactgtcatttctatgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaatcat-atagtttagggacgattttgttcgattta 33920674  T
Q  123 aaaga 127  Q
    |||||    
T  33920673 aaaga 33920669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 171
Target Start/End: Complemental strand, 42192400 - 42192253
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa-catgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||| | || ||||||||||||  ||||||| || ||||| |||||||||||||| ||| ||| |||||| | |||||||||||||||     
T  42192400 ctaaaactgtcatttatgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgattta 42192302  T
Q  123 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||| | || || |||||  |||| |||||||||||||| ||||||||    
T  42192301 aaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaa 42192253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 43160170 - 43160066
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaacatg-ataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||| | || ||||||||||||||||||| |||| ||||| |||||||||||||| ||| ||| |||||| | |||||||||||||||     
T  43160170 ctaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaaatgtatagtttagggacgattttgttcgattta 43160071  T
Q  123 aaaga 127  Q
    |||||    
T  43160070 aaaga 43160066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 4355929 - 4355812
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatga 108  Q
    |||||| ||| || ||||||||||||||| | || ||||||||||||||||||| |||| ||||| ||||||||| |||||||| ||| |||||| | ||    
T  4355929 cataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacga 4355831  T
Q  109 ttttgttcgatttgaaaga 127  Q
    ||||||||||||| |||||    
T  4355830 ttttgttcgatttaaaaga 4355812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 42192612 - 42192776
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggagg-taggaataaaactgcaaaaa--catgataatttaggta 105  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||||| || || || ||||||||||||||  |||  || |||||| |    
T  42192612 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaaacatc-tagtttaggga 42192710  T
Q  106 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
     ||||||||||||||| ||||| | || || |||||  |||| ||||||||||| || ||||||||    
T  42192711 cgattttgttcgatttaaaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaa 42192776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 18450991 - 18450926
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaaaaa 89  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||| ||||||||    
T  18450991 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaaaaa 18450926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 9330164 - 9330284
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa--catgataatttaggta 105  Q
    |||||||| ||| || ||||||||||||||||| |||||||||  ||||||||||||| || ||||| ||||||||||||||  ||| ||| ||| || |    
T  9330164 agcataggtggttggactaaaactgtcatttctatgtgtttctatagttgaaaataggtagataggactaaaactgcaaaaaaacat-atagtttgggga 9330262  T
Q  106 tgattttgttcgatttgaaaga 127  Q
     ||||||||||||||| |||||    
T  9330263 cgattttgttcgatttaaaaga 9330284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 15550834 - 15550730
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc--aaaaacatgataatttaggtatgattttgttcgattt 121  Q
    ||||||||||||||||| || ||||||||||||||||||| |||  ||||| |||||||||  |||||||| ||| |||||| | |||||||||||||||    
T  15550834 ctaaaactgtcatttctgtgcgtttctggagttgaaaatagggaaataggactaaaactgcaaaaaaacat-atagtttagggacgattttgttcgattt 15550736  T
Q  122 gaaaga 127  Q
     |||||    
T  15550735 aaaaga 15550730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 18451199 - 18451277
Alignment:
Q  8 aagcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa 86  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||| |||| |||||    
T  18451199 aagcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaagaaaaatgcaa 18451277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 5560920 - 5561001
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| ||||| ||||||||||||||    
T  5560920 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa 5561001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 4809055 - 4808936
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||||| || ||||| ||||||| | |||||||| ||| |||| | |     
T  4809055 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaactacaaaaaacat-atagtttatggac 4808957  T
Q  107 gattttgttcgatttgaaaga 127  Q
    ||||||||||||||| |||||    
T  4808956 gattttgttcgatttaaaaga 4808936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 13399582 - 13399479
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||||| || ||||||||||||| ||||| |||| ||||| ||||||||| |||||||| ||| |||||| | |||||||||| ||||     
T  13399582 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttccattta 13399484  T
Q  123 aaaga 127  Q
    |||||    
T  13399483 aaaga 13399479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 43058717 - 43058792
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaaaaacatgataatt 99  Q
    ||||||||| |||||||||| |||||||||| |||||||||||||||||||  |||| ||||| || |||||||||    
T  43058717 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaatgataatt 43058792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 43216079 - 43216198
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggaataaaactgcaaaaacatgataatttaggtatg 107  Q
    |||||||| ||| || |||||| |||||||||| ||  |||||||||||| |||||| ||| ||||| ||||||||||||||    ||| |||||| | |    
T  43216079 agcataggtggttggactaaaattgtcatttctgtgcatttctggagttggaaatagagagataggactaaaactgcaaaaaatatatagtttagggacg 43216178  T
Q  108 attttgttcgatttgaaaga 127  Q
    |||||||||||||| |||||    
T  43216179 attttgttcgatttaaaaga 43216198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 11539814 - 11539662
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa--catgataatttaggta 105  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| ||||||| || ||||| ||||||||||||||  ||| ||| |||| | |    
T  11539814 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacat-atagtttaagga 11539716  T
Q  106 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
     ||||||||||||||| ||| ||  || || |||||  |||| |||||||||||    
T  11539715 cgattttgttcgatttaaaaaaaataggaccattttcgtgagttggtcaaaatg 11539662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 16175719 - 16175839
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa--catgataatttaggta 105  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| ||||||| || ||||| ||||||||||||||  ||| ||| |||| | |    
T  16175719 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacat-atagtttaagga 16175817  T
Q  106 tgattttgttcgatttgaaaga 127  Q
     ||||||||||||||| |||||    
T  16175818 cgattttgttcgatttaaaaga 16175839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 40027316 - 40027270
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  40027316 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 40027270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 11090695 - 11090606
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  11090695 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 11090606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 26538454 - 26538539
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||||||||||||||||||||||| |||||||| | |||||||| || |||||||  |||| ||||| ||| |||||||||    
T  26538454 ggggtaggtctaaaactgtcatttctctgcgtttctggggtttgaaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 26538539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 33920981 - 33921062
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||||| || |||||| |||||| ||||| |||| ||||| ||||||||||||||    
T  33920981 agcataggtggttggactaaaactgtcatttctgtgcgtttctagagttggaaatagggagataggactaaaactgcaaaaa 33921062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 63133 - 62982
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||| | || |||||| |||||| ||||| |||| ||||| ||||||||| |||||||| ||| |||| | |     
T  63133 agcataggtggttggactaaaactgtcatttatgtgcgtttcttgagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggac 63035  T
Q  107 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    ||||||||||||||| ||| | | || || |||||  |||| |||||||||||    
T  63034 gattttgttcgattttaaaaaggtaggaccattttcgtgagttggtcaaaatg 62982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 7446730 - 7446806
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| |||| ||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  7446730 ctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 7446806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 159
Target Start/End: Original strand, 16953320 - 16953455
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa-catgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||||| || |||| |||||||| ||||||| || ||||| |||||||||||||| ||| ||| |||||| |   |||||||||||||     
T  16953320 ctaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaacat-atactttagggacatttttgttcgattta 16953418  T
Q  123 aaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    ||||| | || || | ||| ||||| |||||||||||    
T  16953419 aaagaggtaggaccaatttcatgagttggtcaaaatg 16953455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 32418333 - 32418221
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaat-aggaggtaggaataaaactgcaaaaacatgataatttaggtatg 107  Q
    |||||||| ||| || |||||| |||||||||| || ||||||||||||| |||| ||||| || || ||||||||||||||    ||| |||||| | |    
T  32418333 agcataggtggttggactaaaaatgtcatttctgtgcgtttctggagttggaaataaggagatatgactaaaactgcaaaaaatatatagtttagggacg 32418234  T
Q  108 attttgttcgatt 120  Q
    |||||||||||||    
T  32418233 attttgttcgatt 32418221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 40815506 - 40815430
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| |||||||||| || ||||||||||||||||  |||| ||||| ||| |||||||||    
T  40815506 ctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 40815430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 43160397 - 43160461
Alignment:
Q  26 taaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||||||||||| || ||||||||||||| ||||| |||| ||||| ||||||||||||||    
T  43160397 taaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa 43160461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 239528 - 239437
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||| ||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  239528 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 239437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 14432315 - 14432272
Alignment:
Q  12 atagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  14432315 atagggggtaggtctaaaactgtcatttctctgcgtttttggag 14432272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 40815714 - 40815805
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  40815714 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 40815805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 1978284 - 1978238
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||| ||||||||||||||||||||||||||||| |||| |||||    
T  1978284 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggag 1978238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 4356126 - 4356239
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||  ||| | ||||||||| |||||||| ||| |||| | |     
T  4356126 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggaaatagaattaaaactgcaaaaaacat-atagtttaaggac 4356224  T
Q  107 gattttgttcgattt 121  Q
    |||||||||||||||    
T  4356225 gattttgttcgattt 4356239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 6949625 - 6949547
Alignment:
Q  12 atagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    ||||| ||| || ||||||||||||||||| || |||| |||||||| ||||| |||| ||||| ||||||||||||||    
T  6949625 ataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaa 6949547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 14432525 - 14432575
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 74  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  14432525 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtagga 14432575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 38008127 - 38008007
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc--aaaaacatgataatttaggta 105  Q
    |||||||| ||| ||  |||||||||||||||| || |||| |||||||| ||||| |||| || || |||||||||  |||||||| ||| |||||| |    
T  38008127 agcataggcggttggattaaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaaaacat-atagtttaggga 38008029  T
Q  106 tgattttgttcgatttgaaaga 127  Q
     ||||||||||||||| |||||    
T  38008028 cgattttgttcgatttaaaaga 38008007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 43058509 - 43058475
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctct 43  Q
    |||||||||||||||||||||||||||||||||||    
T  43058509 agcatagggggtaggtctaaaactgtcatttctct 43058475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 44219804 - 44219707
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgattt 121  Q
    ||||||||||||||||| || ||||||||||||| ||| | |||| ||||| ||||||||| |||||||| |||||||| | |  ||||||||||||||    
T  44219804 ctaaaactgtcatttctgtgcgtttctggagttggaaacagggagataggactaaaactgcaaaaaacat-ataatttaaggacaattttgttcgattt 44219707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 63328 - 63409
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||| | || |||||| |||||| ||||||| || ||||| ||||||||||||||    
T  63328 agcataggtggttggactaaaactgtcatttatgtgcgtttctagagttggaaataggaagataggactaaaactgcaaaaa 63409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 3025848 - 3025897
Alignment:
Q  26 taaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 74  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  3025848 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtagga 3025897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 8425514 - 8425465
Alignment:
Q  26 taaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 74  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  8425514 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtagga 8425465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 20128107 - 20128188
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| ||||| |||| ||||| ||||| ||||||||    
T  20128107 agcataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaattgcaaaaa 20128188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 3025641 - 3025609
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttct 41  Q
    |||||||||||||||||||||||||||||||||    
T  3025641 agcatagggggtaggtctaaaactgtcatttct 3025609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 22374709 - 22374785
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||||||||||||||  ||||| ||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  22374709 ctaaaactgtcatttctctgcatttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 22374785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 239736 - 239783
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggta 71  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||||||    
T  239736 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggta 239783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 1978494 - 1978569
Alignment:
Q  26 taaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||| ||||||| ||||||||| ||||| |||||||||||||||||  |||| ||||| ||| |||||||||    
T  1978494 taaaactgccatttctttgtgtttctagagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataatt 1978569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 8425736 - 8425775
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  8425736 ggggtaggtctaaaactgtcatttctctgcgtttttggag 8425775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 26538273 - 26538182
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||| || ||||||||||||||| |||||||||||||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  26538273 agcatagaggataggtctaaaactgttatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 26538182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 13315673 - 13315591
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctg-tgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||||| ||   |||||||||||| ||||| |||| ||||| ||||||||||||||    
T  13315673 agcataggtggttggactaaaactgtcatttctgtgcattttctggagttggaaatagggagataggactaaaactgcaaaaa 13315591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 38008321 - 38008434
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || |||||||| |||||| | || |||| |||||||| ||||||| || ||||| ||||||||| |||||||| ||| |||| | |     
T  38008321 agcataggtggttggactaaaactatcatttatgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggac 38008419  T
Q  107 gattttgttcgattt 121  Q
    |||||||||||||||    
T  38008420 gattttgttcgattt 38008434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 43215883 - 43215805
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaa 88  Q
    |||||| ||| || ||||||||||||||||| |  |||| |||||||||||||| |||| || || |||||||||||||    
T  43215883 cataggtggttggactaaaactgtcatttctattcgtttttggagttgaaaatagggagatatgactaaaactgcaaaa 43215805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 13399790 - 13399871
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| ||  |||||||||||||||| || |||| |||||||| ||||| |||| || || ||||||||||||||    
T  13399790 agcataggtggttggattaaaactgtcatttctatgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaa 13399871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 22445800 - 22445759
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg 66  Q
    ||||||||||||||| | |||||||||| |||||||||||||    
T  22445800 ctaaaactgtcatttatgtgtgtttctgaagttgaaaatagg 22445759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 159
Target Start/End: Original strand, 25336037 - 25336121
Alignment:
Q  76 taaaactgcaaaaacatg-ataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    |||||||||||||| ||  |||||||||| | ||||||||||||||| ||||||| || || | |||  |||| |||||||||||    
T  25336037 taaaactgcaaaaaaatatataatttagggacgattttgttcgatttaaaagaagtaggaccaatttcgtgagttggtcaaaatg 25336121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 28616998 - 28617074
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||  ||||||||| |||||||||| |||||||||||||||| ||  |||| ||||| ||| |||||||||    
T  28616998 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataatt 28617074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 40027524 - 40027600
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||| |||||| ||| |||| ||||||| |||||||||||||||||  |||| ||||| ||| |||||||||    
T  40027524 ctaaaactgccatttcactgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 40027600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 95; Significance: 1e-46; HSPs: 5)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 205738 - 205900
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaacatgataatttaggtatga 108  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||| |||||| ||||||||||||||||||||| |||||| | |     
T  205738 agcatagggggtaggtctaaaactgccatttctctgcgtttttggagttgaaaataggacgtaggactaaaactgcaaaaacatgatagtttagggacgg 205837  T
Q  109 ttttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||||||||||||||||| |||| || |||||  |||| |||||||||||||| ||| ||||    
T  205838 ttttgttcgatttgaaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaa 205900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 205115 - 205031
Alignment:
Q  20 taggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgca-aaaacatgataatttagg 103  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| ||||||    
T  205115 taggtctaaaacttccatttctctgtgtttctagagttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtttagg 205031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 205544 - 205461
Alignment:
Q  20 taggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaacatgataatttagg 103  Q
    |||||||||||||| |||||||||||| |||| |||||||||||||||||| ||| ||||||| |||||| |||||| ||||||    
T  205544 taggtctaaaactgccatttctctgtgattctagagttgaaaataggaggttggactaaaactacaaaaaaatgatagtttagg 205461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 210784 - 210870
Alignment:
Q  85 aaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||| |||||| |||||| | | ||||||||||||||||||| |||| || ||||| ||||| |||||||||||||| ||||||||    
T  210784 aaaaaaatgatagtttagggacggttttgttcgatttgaaagaggcaggaccattttcatgagttggtcaaaatgtgaggaccaaaa 210870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 64479 - 64432
Alignment:
Q  8 aagcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||    
T  64479 aagcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 64432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 9e-45; HSPs: 91)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 36701466 - 36701629
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc-aaaaacatgataatttaggtatg 107  Q
    |||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||||| |||||||||||| |||||| |||    
T  36701466 agcatatggggtaggtctaaaactgccatttctatgtgtttctggagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtttagggatg 36701565  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||||||||||||||||||  ||  || |||||  |||||||||||||||| || ||||||||    
T  36701566 attttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgcgaggaccaaaa 36701629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 27200062 - 27200212
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc-aaaaacatgataatttaggtatg 107  Q
    |||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||| || ||||||||| |||||||||||| |||||| | |    
T  27200062 agcataaggggtaggtctaaacctgtcatttctctgcgtttctggagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtttagg-acg 27200160  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
     | ||||||||||||||||| ||||||| |||||  ||||||||||||||||    
T  27200161 gtattgttcgatttgaaagaggcagaaccattttcgtgagctggtcaaaatg 27200212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 25 - 172
Target Start/End: Complemental strand, 2323538 - 2323391
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttga 123  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||| ||||| ||| |||||||||||| |||||| ||| |||||||||||||||    
T  2323538 ctaaaactgtcatttatccgtgtttctggagttgaaaataggaggtaggactaaaattgcaaaaaacatgatagtttagg-atggttttgttcgatttga 2323440  T
Q  124 aagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaaa 172  Q
    |||| |||| | ||||||| ||| |||||||||||| || ||| |||||    
T  2323439 aagaggcagtataatttttgtgaactggtcaaaatgcgaggacaaaaaa 2323391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 55192293 - 55192143
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaa-catgataatttaggtatg 107  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||| ||| ||| |||| | | |    
T  55192293 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggaggtaggactaaaactacaaaaaacat-atagtttatggacg 55192195  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
     ||||||| ||||||||||| ||   || |||||  ||||||||||||||||    
T  55192194 gttttgtttgatttgaaagaggcgagaccattttcgtgagctggtcaaaatg 55192143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 49407971 - 49407809
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgca-aaaacatgataatttaggtatg 107  Q
    |||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||| || |||||||| | ||||||| | | |||||| | |    
T  49407971 agcatagggggtaggtctaaaattgtcatttctctgcgtttttggagttgaaaataggaggtatgactaaaactgtacaaaacat-aaagtttagggacg 49407873  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
     |||||||| |||||||||| |||  || |||||  |||||||||||||||| || ||||||||    
T  49407872 gttttgttctatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaa 49407809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 50900898 - 50901060
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc-aaaaacatgataatttaggtatg 107  Q
    |||||||||||||| ||||||||||  |||||| || |||| ||||||||||||||||||||||||  |||||||| |||||||| ||| |||||| | |    
T  50900898 agcatagggggtagatctaaaactgcaatttctttgcgtttatggagttgaaaataggaggtaggacaaaaactgcaaaaaacat-atagtttagggacg 50900996  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
     |||||||||||||| |||| ||||  | |||||| |||||||||||||||| || ||||||||    
T  50900997 gttttgttcgatttgtaagaggcagggccatttttgtgagctggtcaaaatgcgaggaccaaaa 50901060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 37847190 - 37847308
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaacatgataatttaggtatga 108  Q
    ||||||| ||||| |||||||| |||||||||||||  |||||| ||||||||||||||| ||||| ||||||||||||||||||||| |||||| | |     
T  37847190 agcatagtgggtaagtctaaaattgtcatttctctgcatttctgaagttgaaaataggagataggactaaaactgcaaaaacatgatagtttagggacgg 37847289  T
Q  109 ttttgttcgatttgaaaga 127  Q
     ||||||||||||||||||    
T  37847290 ctttgttcgatttgaaaga 37847308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 37075864 - 37075711
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgca----aaaacatgataatttaggt 104  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||    ||||||| ||| ||||||     
T  37075864 agcatagggggtaggtctaaaacggtcatttctctgcgtttctggagttgaaaataagaggtaggactaaaactgcaaaaaaaaacat-atagtttaggg 37075766  T
Q  105 atgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    | |  |||||| ||||||||||| |||| || |||||  |||| |||||||||||    
T  37075765 acgggtttgtttgatttgaaagaggcaggaccattttcgtgagttggtcaaaatg 37075711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 27199878 - 27199714
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaa--catgataatttaggtat 106  Q
    |||||||||||||||||||||||||  |||| |||| |||||| ||||||||||||||| |||| | ||||||||||||||  ||| ||| |||||  |     
T  27199878 agcatagggggtaggtctaaaactgatatttatctgcgtttctagagttgaaaataggatgtagcactaaaactgcaaaaaaacat-atagtttagtgac 27199780  T
Q  107 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaaa 172  Q
    | ||||||||||||||||||| |||  || |||||  |||||||||||||||| || |||||||||    
T  27199779 ggttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaaa 27199714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 25 - 171
Target Start/End: Complemental strand, 50900692 - 50900545
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc--aaaaacatgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||||||| ||||||| ||||||||||||| |||||||| |||||||||  |||||||||||| |||||| | | ||||||||||||||    
T  50900692 ctaaaactgtcatttctctatgtttctagagttgaaaatagaaggtaggactaaaactgcgaaaaaacatgatagtttagg-acggttttgttcgatttg 50900594  T
Q  123 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    |||||   || || |||||  ||||||| ||||||| ||| ||||||||    
T  50900593 aaagagttaggaccattttcgtgagctgatcaaaatttgaagaccaaaa 50900545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 157
Target Start/End: Original strand, 8874063 - 8874205
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaa---catgataatttaggtatgatttt 112  Q
    |||||| ||||||||||||||||||| || |||||||||||||||||||| |||||| | ||||||||||||||   ||| ||| |||||| | | ||||    
T  8874063 ggggtaagtctaaaactgtcatttct-tgcgtttctggagttgaaaatagaaggtagaactaaaactgcaaaaaaaacat-atagtttagggaaggtttt 8874160  T
Q  113 gttcgatttgaaagaagcagaacaatttttatgagctggtcaaaa 157  Q
    ||||||||| |||||||||| || |||||  ||||||||||||||    
T  8874161 gttcgatttaaaagaagcaggaccattttcgtgagctggtcaaaa 8874205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 43222566 - 43222402
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaa-taggaggtaggaataaaactgcaaaaa-catgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||| | |  ||||||||||||||||| |||| ||||||| ||||| |||||||| ||| ||| |||||| |     
T  43222566 agcataggtggttggactaaaactgtcatttttgtacgtttctggagttgaaaaatagggggtaggattaaaaatgcaaaaaacat-atagtttagggac 43222468  T
Q  107 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaaa 172  Q
    ||||||||||||||| |||||  || ||| |||||  |||| ||||||||||||||||||||||||    
T  43222467 gattttgttcgatttaaaagagacataactattttcgtgagttggtcaaaatgtgatgaccaaaaa 43222402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 49408163 - 49408302
Alignment:
Q  19 gtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc--aaaaacatgataatttaggtatgattttgttc 116  Q
    ||||||||||||||| ||||||| || ||||||||||||||||||  ||||||||| |||||||||  |||||||||||| |||||| |   ||||||||    
T  49408163 gtaggtctaaaactgccatttctttgcgtttctggagttgaaaat--gaggtaggactaaaactgcaaaaaaacatgatagtttagg-acagttttgttc 49408259  T
Q  117 gatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    |||||||||||  || ||| |||||  |||| |||||||||||    
T  49408260 gatttgaaagagacacaaccattttcgtgagatggtcaaaatg 49408302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 52237203 - 52237350
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa-catgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||||| || ||||| ||||||  ||||||| || ||||| |||||||||||||| ||| |||||||||| | |||||||||||||||     
T  52237203 ctaaaactgtcatttctgtgcgtttccggagttagaaatagggagataggactaaaactgcaaaaaacat-ataatttagggacgattttgttcgattta 52237301  T
Q  123 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||| | || || |||||  |||| |||||||||||||| ||||||||    
T  52237302 aaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaa 52237350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 25535067 - 25534903
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataattta-ggta 105  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| ||||| |||| ||||| ||||||||| |||||||| |||||||| || |    
T  25535067 agcataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-ataatttagggga 25534969  T
Q  106 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
     ||||||||||||||| ||||| | || || ||||| ||||  ||||||||||| || ||||||||    
T  25534968 cgattttgttcgatttaaaagaggtaggaccattttcatgaattggtcaaaatgcgaggaccaaaa 25534903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 8873850 - 8873786
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaa 89  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||| || ||||||||||||||    
T  8873850 ctaaaactgtcatttctctgcgtttctgaagttgaaaataggaggtaagactaaaactgcaaaaa 8873786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 36701284 - 36701163
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactg---caaaaacatgataatttaggta 105  Q
    |||||| || |||||||||||| |||||||| |||| |||||||||||||||||||||||| |  | |||||| |    |||||||||||| |||| | |    
T  36701284 agcatacggcgtaggtctaaaattgtcatttatctgcgtttctggagttgaaaataggagggataactaaaaccgtaaaaaaaacatgatagtttatgga 36701185  T
Q  106 tgattttgttcgatttgaaaga 127  Q
     |||||||||||||||||||||    
T  36701184 cgattttgttcgatttgaaaga 36701163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 33412383 - 33412457
Alignment:
Q  15 gggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaa 89  Q
    |||||||||||||||||| ||||||||||| ||||||  |  |||||||||||||||||| ||||||||||||||    
T  33412383 gggggtaggtctaaaactatcatttctctgcgtttctaaaaatgaaaataggaggtaggactaaaactgcaaaaa 33412457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 50662782 - 50662895
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||||||||| |||| ||||| ||||||||| |||||||| ||| |||| | |     
T  50662782 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttgaaaatagggagctaggactaaaactgcaaaaaacat-atagtttaaggac 50662880  T
Q  107 gattttgttcgattt 121  Q
    |||||||||||||||    
T  50662881 gattttgttcgattt 50662895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 40839038 - 40839185
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||||| || ||||||||||||  ||||| |||| ||||| ||||||||| |||||||| ||| |||||| | |||||||||||||||     
T  40839038 ctaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgattta 40839136  T
Q  123 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||| | |  || |||||  |||| | |||||||||||| ||||||||    
T  40839137 aaagaggtaagaccattttcgtgagtttgtcaaaatgtgaggaccaaaa 40839185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 51828133 - 51828014
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||||||||| |||| ||||| ||||| ||| |||||||| ||| |||||| |     
T  51828133 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaaatgcaaaaaacat-atagtttagggac 51828035  T
Q  107 gattttgttcgatttgaaaga 127  Q
    ||||||||||||||| |||||    
T  51828034 gattttgttcgatttaaaaga 51828014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 52236976 - 52236873
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaataggagg-taggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||||| || ||||||||||||||||||||| || || || ||||||||| |||||||| ||| |||||| | |||||||||||||||     
T  52236976 ctaaaactgtcatttctgtgcgtttctggagttgaaaatagggggatatgactaaaactgcaaaaaacat-atagtttagggacgattttgttcgattta 52236878  T
Q  123 aaaga 127  Q
    |||||    
T  52236877 aaaga 52236873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 171
Target Start/End: Complemental strand, 40275255 - 40275106
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaacatgat--aatttaggtatgattttgttcgattt 121  Q
    ||||||||||||||||| || ||||||||||||  ||||| |||| ||||| |||||||||||||| |  ||  | |||||| |  ||||||||||||||    
T  40275255 ctaaaactgtcatttctgtgcgtttctggagttagaaatatggagataggactaaaactgcaaaaaaaacatagagtttagggacaattttgttcgattt 40275156  T
Q  122 gaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
     ||||| | || || |||||  |||| |||||||||||||| ||||||||    
T  40275155 aaaagaggtaggaccattttcgtgagttggtcaaaatgtgaggaccaaaa 40275106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 172
Target Start/End: Original strand, 37076060 - 37076208
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaa-taggaggtaggaataaaactgcaaaaa-catgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||| |||||||||  |||||| ||||| |||| ||| ||||| || ||||| || ||||| ||||||| |||||| | ||||||||||||||||    
T  37076060 ctaaaactgccatttctctacgtttctagagttaaaaaatagaaggtaagactaaaaatgtaaaaaacatgatagtttagg-acgattttgttcgatttg 37076158  T
Q  123 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaaa 172  Q
    ||||| || | || |||||  ||||||| |||||||| || |||||||||    
T  37076159 aaagaggcgggaccattttcgtgagctgatcaaaatgcgaggaccaaaaa 37076208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 5137365 - 5137441
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| ||||| ||||| ||||| ||| |||||||||    
T  5137365 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaaatgataatt 5137441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 26837521 - 26837445
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  26837521 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 26837445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 37727314 - 37727390
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  37727314 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 37727390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 40275464 - 40275626
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggagg-taggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| ||||||| || || || ||||||||| |||||||| ||| |||||  |     
T  40275464 agcataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacat-atagtttagagac 40275562  T
Q  107 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||||||||||||| ||||| | || || | |||  |||| |||||||||||||| ||||||||    
T  40275563 gattttgttcgatttaaaagaggtaggacca-tttcgtgagttggtcaaaatgtgaggaccaaaa 40275626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 46013598 - 46013479
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||| ||||||| | || ||||||||||||||||||| |||| || || ||||||||| |||||||| ||| |||||| |     
T  46013598 agcataggtggttggactaaaaccgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacat-atactttagggac 46013500  T
Q  107 gattttgttcgatttgaaaga 127  Q
    ||||||||||||||| |||||    
T  46013499 gattttgttcgatttaaaaga 46013479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 171
Target Start/End: Complemental strand, 55389765 - 55389618
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||||| || ||||||||||||| ||||| |||| ||||| ||||||||| |||||||| ||| |||| | | |||||||||||||||     
T  55389765 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattta 55389667  T
Q  123 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||| | | || || |||||  |||| ||||| ||||| || ||||||||    
T  55389666 aaaaaggtaggaccattttcgtgagttggtcgaaatgggaggaccaaaa 55389618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 5137156 - 5137065
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  5137156 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 5137065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 37727105 - 37727014
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  37727105 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 37727014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 41046876 - 41046785
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  41046876 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 41046785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 49720547 - 49720428
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggaataaaactgcaaaaacatgataatttaggtatg 107  Q
    |||||||| ||| || ||||||||||||||| | || |||||||||||| ||||  ||||| ||||| ||||||||||||||    ||| |||||| | |    
T  49720547 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttagaaataaggagataggactaaaactgcaaaaaacgtatactttagggacg 49720448  T
Q  108 attttgttcgatttgaaaga 127  Q
    |||||||||||||| |||||    
T  49720447 attttgttcgatttaaaaga 49720428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 24300925 - 24300971
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  24300925 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 24300971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 31778814 - 31778764
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 74  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  31778814 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagga 31778764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 39555946 - 39555992
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  39555946 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 39555992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 43222775 - 43222923
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaa-taggaggtaggaataaaactgcaaaaacatgataa--tttaggtatgattttgttcgattt 121  Q
    ||||||||||||||| | || ||||||||||||||||| |||| ||| ||| |||||||||||||| |  ||||  |||||| | |||||||||||||||    
T  43222775 ctaaaactgtcatttttgtgcgtttctggagttgaaaaatagggggtgggactaaaactgcaaaaaaac-ataaagtttagggacgattttgttcgattt 43222873  T
Q  122 gaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
     ||||| |||  || |||||  || ||| ||||||||| || ||||||||    
T  43222874 aaaagaggcatgaccattttcgtgcgcttgtcaaaatgcgaggaccaaaa 43222923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 46013792 - 46013944
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa--catgataatttaggta 105  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| ||||||| || ||||| ||||||||||||||  ||| ||| |||| | |    
T  46013792 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacat-atagtttaagga 46013890  T
Q  106 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
     ||||||||||||||| ||| |   ||||| ||||||  ||| |||||||||||    
T  46013891 cgattttgttcgatttaaaaaagatagaaccatttttgggagttggtcaaaatg 46013944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 51473029 - 51472880
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatga 108  Q
    |||||| ||| || ||||||||||||||||| || |||| |||||||| ||||| |||| ||||| ||||||||| |||||||| ||| |||||| |  |    
T  51473029 cataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacat-atactttagggacaa 51472931  T
Q  109 ttttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    ||||||| ||||| ||||| | || | || ||| ||||| |||||||||||    
T  51472930 ttttgtttgatttaaaagaggtaggaaaaatttcatgagttggtcaaaatg 51472880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 32730759 - 32730840
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||  ||||| |||| ||||| ||||||||||||||    
T  32730759 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagtttgaaatagggagataggattaaaactgcaaaaa 32730840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 47431873 - 47431792
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||  ||||| |||| ||||| ||||||||||||||    
T  47431873 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaa 47431792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 49951916 - 49951997
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||||||||| |||| || || ||||||||||||||    
T  49951916 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaa 49951997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 51828343 - 51828408
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    ||||||||||||||||| || ||||||||||||| ||||| |||| ||||| ||||||||||||||    
T  51828343 ctaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa 51828408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 55389967 - 55390048
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||||| || |||| |||||||| ||||| |||||||||| ||||||| ||||||    
T  55389967 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggaggtaggactaaaactacaaaaa 55390048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 22424975 - 22424899
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||||||||||||||  ||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  22424975 ctaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 22424899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 24300717 - 24300641
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||| |||  |||| ||||| ||| |||||||||    
T  24300717 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaattgcaacaaaaatgataatt 24300641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 30104657 - 30104617
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgttt 49  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  30104657 agcatagggggtaggtctaaaactgtcatttctctgcgttt 30104617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 32535120 - 32535044
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  32535120 ctaaaactgtcatttctctgtgattctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 32535044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 34105018 - 34105139
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaat-aggaggtaggaataaaactgc---aaaaacatgataatttaggt 104  Q
    |||||||| ||| || ||||||||||||||||| || ||||||| ||||| |||| ||||| | ||| |||||||||   |||||||| ||| ||||||     
T  34105018 agcataggtggttggactaaaactgtcatttctgtgcgtttctgaagttggaaataaggagatgggactaaaactgcaaaaaaaacat-atagtttaggg 34105116  T
Q  105 atgattttgttcgatttgaaaga 127  Q
    | ||||||||||||||| |||||    
T  34105117 acgattttgttcgatttaaaaga 34105139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 39555739 - 39555691
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtag 72  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||    
T  39555739 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtag 39555691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 41047083 - 41047159
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||| |||||||||| |||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  41047083 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 41047159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 43973824 - 43973900
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagt-tgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| |||||||| || ||||||||||||||||||  |||| ||||| ||| |||||||||    
T  43973824 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 43973900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 52375717 - 52375864
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaataggag-gtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||||| || ||||||||||||| ||||||| |  || || ||||||||| |||||||| ||| |||| | | |||||||||| ||||     
T  52375717 ctaaaactgtcatttctgtgcgtttctggagttggaaataggggaatatgactaaaactgcaaaaaacat-atagtttatggacgattttgttcaattta 52375815  T
Q  123 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||| | || || |||||  |||| ||||||||||| || ||||||||    
T  52375816 aaagaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaa 52375864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 170
Target Start/End: Original strand, 330206 - 330368
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| ||  |||||||||||||||| || |||||| |||||| ||||| |||| || || ||||||||| |||||||| ||| |||||| |     
T  330206 agcataggtggttggattaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaacat-atagtttagggac 330304  T
Q  107 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaa 170  Q
    ||||||||| ||||| ||| | | || || |||||  |||| ||||||||||| || |||||||    
T  330305 gattttgtttgatttaaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaa 330368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 25853596 - 25853687
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  25853596 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 25853687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 26274936 - 26274971
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctg 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  26274936 agcatagggggtaggtctaaaactgtcatttctctg 26274971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 2051476 - 2051394
Alignment:
Q  8 aagcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    ||||||||| ||| || ||||||||||||||| | || ||||||||||||  ||||| |||  ||||||||||||||||||||    
T  2051476 aagcataggtggttggactaaaactgtcatttttgtgcgtttctggagttagaaatagggaaataggaataaaactgcaaaaa 2051394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 20840734 - 20840696
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgttt 49  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  20840734 catagggggtaggtctaaaactgtcatttctctgcgttt 20840696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 29801798 - 29801876
Alignment:
Q  23 gtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||||||| |||  |||| ||||| ||| |||||||||    
T  29801798 gtctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataatt 29801876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 40838825 - 40838747
Alignment:
Q  12 atagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggagg-taggaataaaactgcaaaaa 89  Q
    ||||| ||| || ||||||||||||||||| || ||||||||||||| ||||||| || || || ||||||||||||||    
T  40838825 ataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaa 40838747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 44676858 - 44676955
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgattt 121  Q
    ||||||||||||||| | || |||||||||||||||||||| ||| ||||| ||||| ||| |||||||| ||| |||| | | |||||||||||||||    
T  44676858 ctaaaactgtcatttatgtgcgtttctggagttgaaaatagagagataggactaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattt 44676955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 51828700 - 51828596
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa--catgataatttaggtatgattttgttcgattt 121  Q
    ||||||||||||||| | || ||||||||||||| ||||||| || ||||| ||||||||||||||  ||| ||| |||| | | |||||||||||||||    
T  51828700 ctaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacat-atagtttacggacgattttgttcgattt 51828602  T
Q  122 gaaaga 127  Q
     |||||    
T  51828601 aaaaga 51828596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 14654577 - 14654642
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaat-aggaggtaggaataaaactgcaaaaa 89  Q
    ||||||||||||||| | || ||||||||||||| |||| ||||| ||||| ||||||||||||||    
T  14654577 ctaaaactgtcatttatgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaa 14654642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 51473225 - 51473306
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||| | || |||| |||||||| ||||| |||| ||||| ||||||||||||||    
T  51473225 agcataggtggttggactaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaa 51473306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 4275748 - 4275824
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||| |||||||||| |||| ||||||| |||||||||||||||||  |||| ||||| ||| |||||||||    
T  4275748 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 4275824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 17464652 - 17464576
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||||||||||| |  |||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  17464652 ctaaaactgtcatttctttacgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 17464576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 20840945 - 20841021
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||| |||||||||| |||| ||||||| |||||||||||||||||  |||| ||||| ||| |||||||||    
T  20840945 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 20841021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 23644849 - 23644925
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| ||| || ||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  23644849 ctaaaactgtcatttctctgcgttactagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaatgataatt 23644925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 25853395 - 25853347
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtag 72  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||||||    
T  25853395 ctaaaactgttatttctctgcgtttctggagtttgaaaataggaggtag 25853347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 27393822 - 27393746
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| |||||||| | ||||||||||| |||||||  |||| ||||| ||| |||||||||    
T  27393822 ctaaaactgtcatttctctgcgtttctggggtttgaaaatagggggtaggacgaaaaatgcaacaaaaatgataatt 27393746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 30098147 - 30098223
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||||||| |||||| ||||||| || |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  30098147 ctaaaactgtcatatctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 30098223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 34104813 - 34104733
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || |||||| |||||||| | || |||||||||| || ||||||||| || || ||||||||||||||    
T  34104813 agcataggtggttggactaaaaatgtcatttttgtgcgtttctggagctggaaataggagatatgactaaaactgcaaaaa 34104733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 38535681 - 38535784
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 122  Q
    |||||||||| |||| | || ||||||||||||| ||||| |||| ||||| ||||||||| |||||||| ||| |||||| | |||||| ||||||||     
T  38535681 ctaaaactgtaatttatgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttattcgattta 38535779  T
Q  123 aaaga 127  Q
    |||||    
T  38535780 aaaga 38535784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 44676632 - 44676529
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||||| || |||||| |||||| ||||| |||| ||||| |||| |||| |||||||| ||| |||||| | | |||||||||||||     
T  44676632 ctaaaactgtcatttctgtgcgtttcttgagttggaaatagggagataggactaaagctgcaaaaaacat-atagtttagggacggttttgttcgattta 44676534  T
Q  123 aaaga 127  Q
    |||||    
T  44676533 aaaga 44676529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 52375487 - 52375384
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||||| || ||||||||||||  ||||| |||| ||| | ||||||||| |||||||| ||| |||||| | |||||||||| ||||     
T  52375487 ctaaaactgtcatttctatgcgtttctggagttagaaatagggagatagaactaaaactgcaaaaaacat-atagtttagggacgattttgttcaattta 52375389  T
Q  123 aaaga 127  Q
    |||||    
T  52375388 aaaga 52375384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 12141113 - 12141180
Alignment:
Q  61 aataggaggtaggaataaaactgcaaaa-acatgataatttaggtatgattttgttcgatttgaaaga 127  Q
    |||||| |||| || ||||||||||||| |||||||| |||||  ||| |||||||||||||||||||    
T  12141113 aatagggggtaagattaaaactgcaaaaaacatgatagtttagagatggttttgttcgatttgaaaga 12141180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 17464860 - 17464895
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctg 44  Q
    |||||||||| |||||||||||||||||||||||||    
T  17464860 agcataggggttaggtctaaaactgtcatttctctg 17464895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 23644638 - 23644547
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||| | ||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  23644638 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 23644547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 26837725 - 26837760
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctg 44  Q
    ||||||||||||| ||||||||||||||||||||||    
T  26837725 agcatagggggtaagtctaaaactgtcatttctctg 26837760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 159
Target Start/End: Complemental strand, 2044445 - 2044296
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa-catgataatttaggtatga 108  Q
    |||||| ||| || |||||||||| |||| | || |||||| |||||| ||||||| || || || ||||||| |||||| ||| |||||||| | | ||    
T  2044445 cataggtggttggactaaaactgttatttatgtgcgtttcttgagttggaaatagggagatatgactaaaactccaaaaaacat-ataatttatggacga 2044347  T
Q  109 ttttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    ||||||||||||| ||||| | |  || ||||| ||||| |||||||||||    
T  2044346 ttttgttcgatttaaaagaggtatgaccattttcatgagttggtcaaaatg 2044296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 171
Target Start/End: Complemental strand, 22370757 - 22370609
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaat-aggaggtaggaataaaactgc--aaaaacatgataatttaggtatgattttgttcgattt 121  Q
    |||||||||| |||||| || ||||||||||||| | || ||||| ||||| |||||||||  |||||||| ||| |||||| | ||||||||| | |||    
T  22370757 ctaaaactgttatttctgtgcgtttctggagttggagataaggagataggactaaaactgcaaaaaaacat-atagtttagggacgattttgtttggttt 22370659  T
Q  122 gaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
     ||| | | || || |||||  |||| ||||||||||| || ||||||||    
T  22370658 aaaaaaggtaggaccattttcgtgagttggtcaaaatgcgaggaccaaaa 22370609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 27393946 - 27393992
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||| ||||||||||||||||||| ||||||||| |||| |||||    
T  27393946 agcatatggggtaggtctaaaactgttatttctctgcgtttttggag 27393992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 31779021 - 31779067
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    ||||||||||||| ||||||||||| |||||||||| |||| |||||    
T  31779021 agcatagggggtacgtctaaaactgacatttctctgcgtttttggag 31779067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 43678471 - 43678358
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||| | || | ||||||||||| ||||| |||| || || ||||||||| |||||||| ||| |||| | |     
T  43678471 agcataggtggttggactaaaactgtcatttatgtgcgcttctggagttggaaatagggagataagactaaaactgcaaaaaacat-atagtttaaggac 43678373  T
Q  107 gattttgttcgattt 121  Q
    |||||||||||||||    
T  43678372 gattttgttcgattt 43678358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 171
Target Start/End: Original strand, 33412614 - 33412687
Alignment:
Q  98 tttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    |||||| | |||||||||||||| ||||||  |||||| |||||  ||||||| |||||||| || ||||||||    
T  33412614 tttagggacgattttgttcgattcgaaagagacagaaccattttcgtgagctgatcaaaatgcgaggaccaaaa 33412687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 41998406 - 41998325
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||||| |  |||| |||||||| ||||| |||| || || ||||||||||||||    
T  41998406 agcataggtggttggactaaaactgtcatttctgttcgtttatggagttggaaatagggagatatgactaaaactgcaaaaa 41998325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 51828910 - 51828991
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||| | || |||| || ||||| ||||| |||| ||||| ||||||||||||||    
T  51828910 agcataggtggttggactaaaactgtcatttatgtgcgtttatgaagttggaaatagggagataggactaaaactgcaaaaa 51828991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 26274728 - 26274652
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||  ||| |||||||||| |||||||||||||||| ||  |||| ||||| ||| |||||||||    
T  26274728 ctaaaactgtcatttaactgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataatt 26274652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 32535330 - 32535374
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||| ||||||||||||| ||||||||||| |||| |||||    
T  32535330 cataggggttaggtctaaaactatcatttctctgcgtttttggag 32535374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 32730549 - 32730446
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||| | || |||||| |||||| ||||| |||| || || ||||||||| |||||||| ||| |||||| | |||||||||| ||||     
T  32730549 ctaaaactgtcatttatgtgcgtttctagagttggaaatagggagatacgattaaaactgcaaaaaacat-atagtttagggacgattttgttcaattta 32730451  T
Q  123 aaaga 127  Q
    |||||    
T  32730450 aaaga 32730446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 8e-42; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 10 - 159
Target Start/End: Original strand, 35163557 - 35163708
Alignment:
Q  10 gcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc---aaaaacatgataatttaggtat 106  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||   |||||||| ||| |||||| |     
T  35163557 gcatagggggtaggcctaaaactgtcatttctctgtgtttttggagttgaaaataggaggtaggactaaaactgcaaaaaaaacat-atagtttagggac 35163655  T
Q  107 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    ||||||||| ||||||||||| ||||||| |||||  ||||||||||||||||    
T  35163656 gattttgtttgatttgaaagaggcagaaccattttcgtgagctggtcaaaatg 35163708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 32836163 - 32836032
Alignment:
Q  23 gtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaacatgataatttaggtatgattttgttcgatttg 122  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||    |||||||||| |||||| | | ||||||||||||||    
T  32836163 gtctaaaactgtcatttctctgtgtttcaggagttgaaaataggaggtagaactaaaact----aaacatgatagtttagg-acggttttgttcgatttg 32836069  T
Q  123 aaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    ||||| |||| ||  ||||| ||||||||||||||||    
T  32836068 aaagaggcaggaccgtttttgtgagctggtcaaaatg 32836032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 32836367 - 32836517
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc-aaaaacatgataatttaggtatg 107  Q
    |||||| ||||||||||||||||||| ||||||||  ||||||| |||||||||||| |||||||| ||||||||| |||||||| | | |||| | | |    
T  32836367 agcataaggggtaggtctaaaactgttatttctcttcgtttctgaagttgaaaatagaaggtaggactaaaactgcaaaaaacat-acagtttaagaacg 32836465  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
     ||||||||||||||||||| |||  || |||||  ||||||||||||||||    
T  32836466 gttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatg 32836517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 147
Target Start/End: Complemental strand, 11523824 - 11523721
Alignment:
Q  46 gtttctggagttgaaaataggaggtaggaataaaactgcaaaaa--catgataatttaggtatgattttgttcgatttgaaagaagcagaacaattttta 143  Q
    |||| |||||||||||||| ||||||||| ||||||||||||||  ||||||| |||||| | | ||||||| ||||||||||||||| ||| |||||||    
T  11523824 gtttatggagttgaaaatatgaggtaggactaaaactgcaaaaaaacatgatagtttagggacggttttgtttgatttgaaagaagcataaccattttta 11523725  T
Q  144 tgag 147  Q
    ||||    
T  11523724 tgag 11523721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 10900109 - 10900024
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  10900109 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 10900024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 159
Target Start/End: Complemental strand, 35163312 - 35163209
Alignment:
Q  56 ttgaaaataggaggtaggaataaaactgca-aaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtca 154  Q
    ||||||||||||||||||| |||||||||| ||||||||||| |||||| | | |||||||||||||||||||  ||  || |||||| |||||||||||    
T  35163312 ttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtttagg-acggttttgttcgatttgaaagagacaagaccatttttgtgagctggtca 35163214  T
Q  155 aaatg 159  Q
    |||||    
T  35163213 aaatg 35163209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 33095853 - 33095771
Alignment:
Q  46 gtttctggagttgaaaataggaggtaggaataaaactgca-aaaacatgataatttaggtatgattttgttcgatttgaaaga 127  Q
    |||| ||||| |||||||||||||||||| |||||||||| ||||||||||| |||||| | | |||||||||||||||||||    
T  33095853 gtttttggaggtgaaaataggaggtaggactaaaactgcaaaaaacatgatagtttagggacggttttgttcgatttgaaaga 33095771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 171
Target Start/End: Complemental strand, 835532 - 835407
Alignment:
Q  46 gtttctggagttgaaaataggaggtaggaataaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatg 145  Q
    |||| ||||| |||||||||| ||||||| |||| ||||||||| |||||| |||||| |   ||||||||||||||||||| |||  || |||||  ||    
T  835532 gtttttggaggtgaaaatagggggtaggactaaagctgcaaaaaaatgatagtttagggacagttttgttcgatttgaaagaggcaagaccattttcgtg 835433  T
Q  146 agctggtcaaaatgtgatgaccaaaa 171  Q
    ||||| | ||||||||| ||||||||    
T  835432 agctgctaaaaatgtgaggaccaaaa 835407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 31073512 - 31073631
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgca-aaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| ||||| |||||||||| ||||||| ||| |||||| |     
T  31073512 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcacaaaacat-atagtttagggac 31073610  T
Q  107 gattttgttcgatttgaaaga 127  Q
     |||||||||||||| |||||    
T  31073611 aattttgttcgatttaaaaga 31073631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 5114628 - 5114531
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgattt 121  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||| ||||| ||||||||| |||||||| ||| |||| | | |||||||||||||||    
T  5114628 ctaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacgattttgttcgattt 5114531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 31573901 - 31573820
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| ||||| ||||||||||||||    
T  31573901 agcataggtggttggactaaaactgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa 31573820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 11445163 - 11445123
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgttt 49  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11445163 agcatagggggtaggtctaaaactgtcatttctctgtgttt 11445123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 12935528 - 12935572
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  12935528 catagggggtaggtctaaaactgtcatttctctgtgtttatggag 12935572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 31574095 - 31574214
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || |||||| |||||||| | || ||||||||||||||||||| |||| || || ||||||||| |||||||| ||| |||||| |     
T  31574095 agcataggtggttggactaaaattgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacat-atagtttagggac 31574193  T
Q  107 gattttgttcgatttgaaaga 127  Q
    ||||||||||||||| |||||    
T  31574194 gattttgttcgatttaaaaga 31574214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 5120856 - 5120958
Alignment:
Q  26 taaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttga 123  Q
    |||||||||||||||| || |||| |||||||| ||||| |||| ||||| ||||||||| |||||||| ||| |||||| | ||||||||||||||| |    
T  5120856 taaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgatttaa 5120954  T
Q  124 aaga 127  Q
    ||||    
T  5120955 aaga 5120958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 10900299 - 10900390
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  10900299 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 10900390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 11276760 - 11276701
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 74  Q
    |||||||| |||||||||||||||||||| |||| ||||| |||||||||||||||||||    
T  11276760 ggggtaggcctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtagga 11276701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 20741277 - 20741230
Alignment:
Q  8 aagcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||    
T  20741277 aagcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 20741230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 28472812 - 28472766
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  28472812 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 28472766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 29860001 - 29859955
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  29860001 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 29859955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 20741485 - 20741550
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaaaaa 89  Q
    |||||| ||||||||||||| |||||||||| |||||||||||||||||||  |||| ||||||||    
T  20741485 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaaaaa 20741550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 25472382 - 25472463
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||||| || |||||||||| || ||||| |||| ||||| ||||||||||||||    
T  25472382 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagctggaaatagggagataggactaaaactgcaaaaa 25472463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 28636566 - 28636647
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| || || ||||||||||||||    
T  28636566 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataagactaaaactgcaaaaa 28636647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 2322588 - 2322628
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgttt 49  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  2322588 agcatagggggaaggtctaaaactgtcatttctctgtgttt 2322628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 11445371 - 11445447
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  11445371 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 11445447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 12935318 - 12935242
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| |||| ||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  12935318 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 12935242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 22219737 - 22219785
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtag 72  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||    
T  22219737 ctaaaactgtcatttctctgagtttctggagtttgaaaataggaggtag 22219785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 25469027 - 25468906
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc---aaaaacatgataatttaggt 104  Q
    |||||||| ||| ||  |||||||||||||||| || ||||||||| || |||||| |||| ||||| |||||||||   |||||||| ||| ||||||     
T  25469027 agcataggtggttggaataaaactgtcatttctgtgcgtttctggaatttaaaatagggagataggactaaaactgcaagaaaaacat-atagtttaggg 25468929  T
Q  105 atgattttgttcgatttgaaaga 127  Q
    | ||||||||||||||| |||||    
T  25468928 acgattttgttcgatttaaaaga 25468906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 11276951 - 11277042
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||||||||||||  |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  11276951 agcatagggggtaggtctaaaactgtcatttctcttcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 11277042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 15828010 - 15828101
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  15828010 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 15828101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 22534208 - 22534165
Alignment:
Q  46 gtttctggagttgaaaataggaggtaggaataaaactgcaaaaa 89  Q
    |||| |||||||||||||||||||||||| ||||||||||||||    
T  22534208 gtttttggagttgaaaataggaggtaggactaaaactgcaaaaa 22534165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 1149802 - 1149840
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgttt 49  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  1149802 catagggggtaggtctaaaactgtcatttctctgcgttt 1149840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 18257313 - 18257267
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||    
T  18257313 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggag 18257267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 29891453 - 29891531
Alignment:
Q  12 atagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    ||||| ||| || |||||||| |||||||| || ||||||||||||| ||||| |||| ||||| ||||||||||||||    
T  29891453 ataggtggttggactaaaactatcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa 29891531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 31470476 - 31470426
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 74  Q
    ||||||||| |||||||||| |||||||||| |||||||||||||||||||    
T  31470476 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtagga 31470426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 129
Target Start/End: Complemental strand, 28636425 - 28636347
Alignment:
Q  51 tggagttgaaaatagg-aggtaggaataaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaagaag 129  Q
    |||||||| ||||||| || || || ||||||||||||||||| ||| |||||| | ||||||||||||||| |||||||    
T  28636425 tggagttggaaatagggagatatgactaaaactgcaaaaacat-atagtttaggaacgattttgttcgatttaaaagaag 28636347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 29891256 - 29891199
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg 66  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| |||||||    
T  29891256 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagg 29891199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 5e-40; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 35579074 - 35578912
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgca-aaaacatgataatttaggtatg 107  Q
    |||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||| |||||| |||||||||| ||||||||||| |||| | | |    
T  35579074 agcataggggataggtctaaaaatgtcatttctctgcgtttctggagttgaaaataggatgtaggattaaaactgcaaaaaacatgatagtttatg-acg 35578976  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
     ||||||||||||||||||  |||| || |||||| ||||||||||||||||  ||||||||||    
T  35578975 gttttgttcgatttgaaagtggcaggaccatttttgtgagctggtcaaaatgcaatgaccaaaa 35578912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 34595158 - 34595305
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaacatgataatttaggtatgattttgttcgatttga 123  Q
    ||||||||||||||||| || ||||||||||||||||||| || ||||| | ||||||||||||||||||||| |||||| | ||||||||||||||| |    
T  34595158 ctaaaactgtcatttctgtgcgtttctggagttgaaaataagggggtagcactaaaactgcaaaaacatgatagtttagggacgattttgttcgatttaa 34595257  T
Q  124 aagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    |||| |||| || |||||  |||| |||||||||||||| ||||||||    
T  34595258 aagatgcaggaccattttcgtgagttggtcaaaatgtgaggaccaaaa 34595305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 159
Target Start/End: Complemental strand, 9393894 - 9393761
Alignment:
Q  26 taaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttgaa 124  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| || |||||||||||| |||||| | | ||||||||||||||||    
T  9393894 taaaactgtcatttcactgtgtttctggagttgaaaataggaggtaggactaaaacagcaaaaaacatgatagtttagg-acggttttgttcgatttgaa 9393796  T
Q  125 agaagcagaacaatttttatgagctggtcaaaatg 159  Q
    ||| |||  ||||||||  ||||||| ||||||||    
T  9393795 agaggcaagacaattttcgtgagctgatcaaaatg 9393761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 39136858 - 39136711
Alignment:
Q  12 atagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaacatgataatttaggtatgattt 111  Q
    |||| |||||| |||||||||||||||| | |  ||||||||||||||||||  ||| ||||| ||||| |||| |||||||||| |||||| | |||||    
T  39136858 atagagggtagatctaaaactgtcatttttgttagtttctggagttgaaaattagagttaggactaaaagtgcataaacatgatagtttagggacgattt 39136759  T
Q  112 tgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    ||||||||||||||||  |||||| |||||  ||||||||||||||||    
T  39136758 tgttcgatttgaaagagtcagaaccattttcgtgagctggtcaaaatg 39136711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 35579256 - 35579406
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc-aaaaacatgataatttaggtatg 107  Q
    |||||||||||||||||||||||||| ||||| ||| |||| | ||||||||||||||||||| || ||||||||| |||||||||||| |||||| | |    
T  35579256 agcatagggggtaggtctaaaactgttatttccctgcgtttttagagttgaaaataggaggtatgactaaaactgcaaaaaacatgatagtttagg-acg 35579354  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
     ||||||| ||||||||||| ||| ||  |||||  ||||||| ||||||||    
T  35579355 gttttgtttgatttgaaagaggcataatcattttcgtgagctgatcaaaatg 35579406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 9394108 - 9394251
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaacatgataatttaggtatgattttgtt 115  Q
    |||||| ||||||||||||||||||| ||||||| || ||||| ||||||||| ||||| ||||||||||||||    ||| |||||| | | |||||||    
T  9394108 ggggtaagtctaaaactgtcatttctttgtgtttttgaagttggaaataggagataggactaaaactgcaaaaaatatatagtttagggacggttttgtt 9394207  T
Q  116 cgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    |||||||||| | | || || |||||| ||||||||||||||||    
T  9394208 cgatttgaaaaaggtaggaccatttttgtgagctggtcaaaatg 9394251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 172
Target Start/End: Complemental strand, 33880759 - 33880632
Alignment:
Q  46 gtttctggagttgaaaataggaggtaggaataaaactgcaaaaac-atgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttat 144  Q
    ||||||| || |||||||| | ||||||| ||||| ||||||||  ||||||||||||| | | ||||||||||||||||||| |||||||||||||| |    
T  33880759 gtttctgaaggtgaaaataaggggtaggactaaaagtgcaaaaaatatgataatttagggacggttttgttcgatttgaaagaggcagaacaatttttgt 33880660  T
Q  145 gagctggtcaaaatgtgatgaccaaaaa 172  Q
    ||||||||||||||  || |||||||||    
T  33880659 gagctggtcaaaatacgaggaccaaaaa 33880632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 34594758 - 34594647
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaacatgataatttaggtatga 108  Q
    |||||||| ||| || |||||||| |||||| | | ||||||| |||||||||||||| ||||||| ||||||||||||||||||||| |||||| ||||    
T  34594758 agcataggtggttggactaaaactatcatttatgtttgtttctcgagttgaaaatagggggtaggactaaaactgcaaaaacatgatagtttagggatga 34594659  T
Q  109 ttttgttcgatt 120  Q
    ||||||| ||||    
T  34594658 ttttgtttgatt 34594647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 4477860 - 4477726
Alignment:
Q  27 aaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggaataaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaa 125  Q
    |||||||||||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||| | |||||| ||| |||| |||    
T  4477860 aaaactgtcatttccctgcgtttctggagtttgaaaataggaggtaggactaaaactgcaaaaacatgatagtttagggacgattttattcaatttaaaa 4477761  T
Q  126 gaagcagaacaatttttatgagctggtcaaaatgt 160  Q
    || || | || |||||  |||  ||||||||||||    
T  4477760 gaggcgggaccattttcgtgaattggtcaaaatgt 4477726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 47 - 171
Target Start/End: Complemental strand, 49064171 - 49064047
Alignment:
Q  47 tttctggagttgaaaataggaggtaggaataaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatga 146  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||||||||| |||| | | |||||||||| |||||||||| |||  || |||||  |||    
T  49064171 tttctggagttgaaaataggagttaggactaaaagtgcaaaaacatgatagtttatggaagattttgttctatttgaaagaggcaataccattttcgtga 49064072  T
Q  147 gctggtcaaaatgtgatgaccaaaa 171  Q
    ||||||||||||  || ||||||||    
T  49064071 gctggtcaaaatacgaggaccaaaa 49064047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 32427397 - 32427470
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaa 89  Q
    ||||||||||||||||||||||||||||| |||| | ||||||||||||||||| |||| ||||||| ||||||    
T  32427397 ggggtaggtctaaaactgtcatttctctgcgtttttagagttgaaaataggaggaaggactaaaactacaaaaa 32427470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 45815465 - 45815563
Alignment:
Q  38 ttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc--aaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaac 135  Q
    ||||||| ||||||||||||||||||| ||||||| | |||||||||  |||||||||||| |||||| | ||||||||||||||| ||||| |||||||    
T  45815465 ttctctgcgtttctggagttgaaaataagaggtagaactaaaactgcaaaaaaacatgatagtttagg-acgattttgttcgatttaaaagaggcagaac 45815563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 25637568 - 25637681
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||||| |||||||||||||||| ||||| |||| ||||| ||||||||| |||||||| ||| |||| | |     
T  25637568 agcataggtggttggactaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggac 25637666  T
Q  107 gattttgttcgattt 121  Q
    |||||||||||||||    
T  25637667 gattttgttcgattt 25637681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 9181708 - 9181595
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaacatgataatttaggtatg 107  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| ||||| |||||||||||||| |  ||| |||| | | |    
T  9181708 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaaatatagtttaaggacg 9181609  T
Q  108 attttgttcgattt 121  Q
    ||||||||||||||    
T  9181608 attttgttcgattt 9181595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 28687869 - 28687988
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||||| || ||||| ||||| ||| |||||||| ||| |||||| |     
T  28687869 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaagtgcaaaaaacat-atagtttagggac 28687967  T
Q  107 gattttgttcgatttgaaaga 127  Q
    ||||||||||||||| |||||    
T  28687968 gattttgttcgatttaaaaga 28687988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 19830804 - 19830854
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 74  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19830804 ctaaaactgtcatttctctgtgtttctggagtttgaaaataggaggtagga 19830854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 7732664 - 7732545
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||| | || |||| |||||||||||||| |||| ||||| ||||||||| |||||||| ||| |||| | |     
T  7732664 agcataggtggttggactaaaactgtcatttatgtgcgtttatggagttgaaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggac 7732566  T
Q  107 gattttgttcgatttgaaaga 127  Q
    ||||||||||||||| |||||    
T  7732565 gattttgttcgatttaaaaga 7732545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 16081685 - 16081788
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||| | || |||| |||||||| ||||| |||| ||||| ||||||||| |||||||| ||| |||||| |||||||||||||||||     
T  16081685 ctaaaactgtcatttttgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggatgattttgttcgattta 16081783  T
Q  123 aaaga 127  Q
    |||||    
T  16081784 aaaga 16081788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 19590909 - 19590985
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  19590909 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 19590985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 33880955 - 33881035
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaa 89  Q
    |||||||||| || | ||||||||||||||| | || ||||||||||||||||||||| | || || ||||||||||||||    
T  33880955 agcataggggatatgactaaaactgtcatttatgtgcgtttctggagttgaaaataggggataagactaaaactgcaaaaa 33881035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 11973772 - 11973891
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaacatgataatttaggtatg 107  Q
    |||||||| ||| || ||||||||||||||||| || ||||||| ||||| ||||||| || ||| | |||||||||||||||    ||||||||| | |    
T  11973772 agcataggtggttggactaaaactgtcatttctgtgcgtttctgaagttggaaataggaagatagaactaaaactgcaaaaaccatttaatttagggacg 11973871  T
Q  108 attttgttcgatttgaaaga 127  Q
    ||||||||| |||| |||||    
T  11973872 attttgttcaatttaaaaga 11973891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 19590701 - 19590610
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  19590701 agcatagggggtaggtctaaaactgtcatttctctgggtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataatt 19590610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 19830596 - 19830505
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  19830596 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 19830505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 37786943 - 37786852
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  37786943 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 37786852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 26026478 - 26026374
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa--catgataatttaggtatgattttgttcgattt 121  Q
    ||||||||||||||||| || ||||||||||||||||||||| || || || ||||||||||||||  ||| ||| |||| | | |||||||||||||||    
T  26026478 ctaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataagactaaaactgcaaaaaaacat-atagtttatggacgattttgttcgattt 26026380  T
Q  122 gaaaga 127  Q
     |||||    
T  26026379 aaaaga 26026374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 37787153 - 37787227
Alignment:
Q  27 aaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  37787153 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 37787227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 48247961 - 48248113
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc--aaaaacatgataatttaggta 105  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| | ||| |||||||||  |||||||| ||| |||| | |    
T  48247961 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagatgggactaaaactgcaaaaaaacat-atagtttaagga 48248059  T
Q  106 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
     ||||||||||||||| ||| |   || || |||||| |||| |||||||||||    
T  48248060 cgattttgttcgatttaaaaaagataggaccatttttgtgagttggtcaaaatg 48248113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 2659211 - 2659300
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  2659211 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataatt 2659300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 16081459 - 16081394
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa 89  Q
    ||||||||||||||||| ||||||| |||||||| ||||||| || ||||| ||||||||||||||    
T  16081459 ctaaaactgtcatttctgtgtgtttttggagttggaaataggtagataggactaaaactgcaaaaa 16081394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 27245380 - 27245299
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaat-aggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || |||||||| |||||||| || ||||||||||||| |||| ||||| ||||| ||||||||||||||    
T  27245380 agcataggtggttggactaaaactatcatttctgtgcgtttctggagttggaaataaggagataggactaaaactgcaaaaa 27245299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 32004774 - 32004726
Alignment:
Q  26 taaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagg 73  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  32004774 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagg 32004726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 32004985 - 32005029
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||||||||||||||| |||| |||||    
T  32004985 catagggggtaggtctaaaactgtcatttctctgcgtttttggag 32005029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 29100220 - 29100311
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  29100220 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataatt 29100311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 35289063 - 35288988
Alignment:
Q  26 taaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||||||| ||||||||| || ||||||  |||| ||||| ||| |||||||||    
T  35289063 taaaactgtcatttctctgtgtttctggagtttgaaaatatgaagtaggacgaaaaatgcaacaaaaatgataatt 35288988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 38858819 - 38858728
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  38858819 agcatagtgggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataatt 38858728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 38859025 - 38859100
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataat 98  Q
    |||||||| ||||||||||| |||||||||| |||||||||||||||||||  |||| ||||| ||| ||||||||    
T  38859025 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 38859100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 9181779 - 9181901
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactg----caaaaacatgataatttagg 103  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| ||||| |||| ||||| ||||||||     |||||||| ||| ||||||    
T  9181779 agcataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggactaaaactggaaaaaaaaacat-atagtttagg 9181877  T
Q  104 tatgattttgttcgatttgaaaga 127  Q
     | ||||||||||||||| |||||    
T  9181878 gacgattttgttcgatttaaaaga 9181901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 14311492 - 14311340
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactg--caaaaacatgataatttaggta 105  Q
    |||||||| ||| || ||||||||||||||| | ||||||| |||||||| ||||| |||| ||||| ||||||||   |||||||| ||| |||||| |    
T  14311492 agcataggtggttggactaaaactgtcatttatgtgtgtttatggagttggaaatagggagataggattaaaactgtaaaaaaacat-atagtttaggga 14311394  T
Q  106 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
     |||||| ||| |||| ||||| | | ||| | ||||||||| |||| ||||||    
T  14311393 cgattttattcaatttaaaagaggtataaccaattttatgagttggttaaaatg 14311340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 25637374 - 25637254
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc--aaaaacatgataatttaggta 105  Q
    |||||||| ||| ||  |||||||||||||| | || ||||||||||||| ||||| |||| ||||| ||||||| |  |||||||| ||| |||||| |    
T  25637374 agcataggtggttggcttaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactacaaaaaaacat-atagtttaggga 25637276  T
Q  106 tgattttgttcgatttgaaaga 127  Q
     ||||||||||||||| |||||    
T  25637275 cgattttgttcgatttaaaaga 25637254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 5334243 - 5334352
Alignment:
Q  62 ataggaggtaggaataaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtg 161  Q
    ||||| ||| ||| ||||||||||||||    ||| |||||| | ||||||||||||||| ||||| | || || |||||  |||| |||||||||||||    
T  5334243 ataggtggttggactaaaactgcaaaaaatatatagtttagggacgattttgttcgatttaaaagaggtaggactattttcgtgagttggtcaaaatgtg 5334342  T
Q  162 atgaccaaaa 171  Q
    | ||||||||    
T  5334343 aggaccaaaa 5334352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 24929689 - 24929754
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    ||||||||||||||||| || |||| |||||||| ||||| |||| ||||| ||||||||||||||    
T  24929689 ctaaaactgtcatttctgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaa 24929754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 26048124 - 26048067
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg 66  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| |||||||    
T  26048124 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagg 26048067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 34534162 - 34534251
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||| |||||||||||||||||||||||||||| ||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  34534162 cataggtggtaggtctaaaactgtcatttctctgtttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 34534251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 48247767 - 48247686
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||||| || |||| |||||||| ||||| |||| || || ||||||||||||||    
T  48247767 agcataggtggttggactaaaactgtcatttctgtgcgtttttggagttggaaatagggagatatgactaaaactgcaaaaa 48247686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 171
Target Start/End: Complemental strand, 28687750 - 28687606
Alignment:
Q  28 aaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaag 126  Q
    |||||||||||| | || ||||||||||||| ||||||| || ||||| || ||||||||||| |  ||| |||| | | |||||||||||||||  ||     
T  28687750 aaactgtcatttatgtgcgtttctggagttggaaataggaagataggactagaactgcaaaaaaaatatagtttaaggacgattttgttcgatttataaa 28687651  T
Q  127 aagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    |   ||||| |||||  |||| |||||||||||  ||||||||||    
T  28687650 agatagaaccattttcgtgagttggtcaaaatgatatgaccaaaa 28687606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 159
Target Start/End: Original strand, 39388652 - 39388789
Alignment:
Q  25 ctaaaactgtcatttctc-tgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa--catgataatttaggtatgattttgttcgatt 120  Q
    ||||||||||||||| |  || |||| |||||||||||||||| || ||||| ||||||||||||||  ||| ||| |||||  | ||||||||||||||    
T  39388652 ctaaaactgtcattttttgtgcgtttttggagttgaaaatagggagataggactaaaactgcaaaaaaacat-atagtttagagacgattttgttcgatt 39388750  T
Q  121 tgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    | ||||| | || |||| |||  |||| |||||||||||    
T  39388751 taaaagaggtaggacaaatttcgtgagttggtcaaaatg 39388789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 4641828 - 4641878
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 74  Q
    |||||||||||||||||||| |||||| ||| |||||||||||| ||||||    
T  4641828 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggacgtagga 4641878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 5745815 - 5745702
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||| | ||||| |||| || || ||||||||| |||||||| ||| |||| | |     
T  5745815 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagtaggaaatagggagataagactaaaactgcaaaaaacat-atagtttaagaaa 5745717  T
Q  107 gattttgttcgattt 121  Q
    |||||||||||||||    
T  5745716 gattttgttcgattt 5745702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 26026688 - 26026801
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||||| || |||| |||||||| ||||| |||| ||  | ||||||||| |||||||| ||| |||| | ||    
T  26026688 agcataggtggttggactaaaactgtcatttctatgcgtttttggagttggaaatagggagataaaactaaaactgcaaaaaacat-atagtttaaggat 26026786  T
Q  107 gattttgttcgattt 121  Q
    | |||||||||||||    
T  26026787 ggttttgttcgattt 26026801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 27245574 - 27245687
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaa-acatgataatttaggtat 106  Q
    |||||||| ||| || |||||||| | |||||| || ||||||||||||| ||||| |||| || || ||||| ||||||| |||| |||||||| | |     
T  27245574 agcataggtggttggactaaaactatgatttctgtgcgtttctggagttggaaatagggagatatgactaaaattgcaaaatacat-ataatttaaggac 27245672  T
Q  107 gattttgttcgattt 121  Q
    |||||||||||||||    
T  27245673 gattttgttcgattt 27245687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 34533952 - 34533902
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 74  Q
    |||||| ||||||||||||| |||| ||||| |||||||||||||||||||    
T  34533952 ctaaaagtgtcatttctctgcgtttttggagtttgaaaataggaggtagga 34533902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 786943 - 786878
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||||||| |||| || |||| |||||||| ||||| |||| ||||| ||||||||||||||    
T  786943 ctaaaactgtcacttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaa 786878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 11971514 - 11971433
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||| | ||||||||| || ||| ||||| |||| ||||| |||||||| |||||    
T  11971514 agcataggtggttggactaaaactgtcatttatgtgtgtttctagaattggaaatagggagataggactaaaactgtaaaaa 11971433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 45815466 - 45815398
Alignment:
Q  61 aataggaggtaggaataaaactgcaaaaa--catgataatttaggtatgattttgttcgatttgaaaga 127  Q
    |||| |||||| || ||||||||||||||  ||||||| |||||| | | |||||||||||||||||||    
T  45815466 aataagaggtaagactaaaactgcaaaaaaacatgatagtttagggacggttttgttcgatttgaaaga 45815398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 2659000 - 2658924
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||| |||||||||| |||| ||||||| |||||||||||||| ||  |||| ||||| ||| |||||||||    
T  2659000 ctaaaactgccatttctctgcgtttttggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataatt 2658924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 2758084 - 2758231
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaataggagg-taggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||| | || ||||||||||||  ||||||| || || || |||| |||| |||||||| ||| |||| | | |||||||||||||||     
T  2758084 ctaaaactgtcatttatatgcgtttctggagttagaaatagggggatatgactaaacctgcaaaaaacat-atagtttatggacgattttgttcgattta 2758182  T
Q  123 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||| | ||||| |||||  |||| ||  ||||||| || ||||||||    
T  2758183 aaagaggtagaaccattttcgtgagttgaacaaaatgcgaggaccaaaa 2758231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 29100011 - 29099935
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||||||||| |||  |||||||| ||| |||||||||||||||||  |||| ||||| ||| |||||||||    
T  29100011 ctaaaactgtcatttatctacgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 29099935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 35193483 - 35193322
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgca-aaaacatgataatttaggtatg 107  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| |||||||||| ||||||| ||| |||||| | |    
T  35193483 agcatagggggtaggtctaaaactgtcatttctctgcgtttctgaagttgaaaataggagataggactaaaactgcaaaaaacat-atagtttagggacg 35193385  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaa 170  Q
    |||||||||||||||||||| | || || |||||  ||||||| |||||||| || |||||||    
T  35193384 attttgttcgatttgaaagaggtaggaccattttcgtgagctgatcaaaatgcgaggaccaaa 35193322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 17504149 - 17503989
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgca-aaaacatgataatttaggtatg 107  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||| | |    
T  17504149 agcatagggggtaggtctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtttagg-acg 17504051  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaa 169  Q
     || ||||| |||||||||| |||| || |||||  |||| ||||||||||| || ||||||    
T  17504050 gttatgttccatttgaaagaggcaggaccattttcgtgagatggtcaaaatgcgaggaccaa 17503989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 229545 - 229692
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaacatgataatttaggtatgattttgttcgatttga 123  Q
    |||||| ||||| |||| || ||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| | | ||||||||| |||||||    
T  229545 ctaaaattgtcacttctgtgcgtttctggagttgaaaataaggaggtaggattaaaactgcaaaaacatgatagtttaaggacgattttgtttgatttga 229644  T
Q  124 aagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    |||| |||  || |||||  |||||||||||||||| || ||||||||    
T  229645 aagaggcaagaccattttcgtgagctggtcaaaatgcgaagaccaaaa 229692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 40160269 - 40160119
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgca-aaaacatgataatttaggtatg 107  Q
    ||||||||||||||||||||||||||||||||||  ||||| | |||||||||||||||||||||| |||||||||| ||||||| ||| |||||| | |    
T  40160269 agcatagggggtaggtctaaaactgtcatttctccatgtttatagagttgaaaataggaggtaggactaaaactgcaaaaaacat-atagtttagggacg 40160171  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
     ||||||||||||| ||||| |||  || |||||  ||||||||| ||||||    
T  40160170 gttttgttcgatttaaaagaggcatgactattttcgtgagctggttaaaatg 40160119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 18965300 - 18965197
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaacatgataatttaggtatgattttgttcgatttga 123  Q
    ||||||||||||||| | || |||||| |||||||||||| |||||||| | ||||||||||||||||||||| |||| | | |||||||||||||||||    
T  18965300 ctaaaactgtcatttatatgcgtttctagagttgaaaataaggaggtagaactaaaactgcaaaaacatgatagtttaaggacgattttgttcgatttga 18965201  T
Q  124 aaga 127  Q
    ||||    
T  18965200 aaga 18965197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 17504329 - 17504410
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttg-aaaataggaggtaggaataaaactgcaaaaa 89  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||| | ||||| ||||||||    
T  17504329 agcatagggggtaggtctaaaactgtcatttctctgcgtttctagagttgaaaaataggaggtagtactaaaattgcaaaaa 17504410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 159
Target Start/End: Original strand, 24336144 - 24336284
Alignment:
Q  20 taggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaa-acatgataatttaggtatgattttgttcga 118  Q
    |||| ||||| ||| ||||||| |  ||||||||||||||||||| | ||||||| |||||  |||||| ||||||||||||||| | | ||||||||||    
T  24336144 taggactaaagctgccatttctatacgtttctggagttgaaaatatggggtaggactaaaagagcaaaaaacatgataatttaggaacggttttgttcga 24336243  T
Q  119 tttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    ||||||||| |||| || |||||  |||||| |||||||||    
T  24336244 tttgaaagaggcaggaccattttcgtgagcttgtcaaaatg 24336284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 159
Target Start/End: Complemental strand, 24335920 - 24335786
Alignment:
Q  26 taaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttgaa 124  Q
    |||||||||||||| | || |||| ||||||||||||||||  |||||| ||||||| | |||||||||||| || || || | ||||||||||||||||    
T  24335920 taaaactgtcatttatgtgcgtttttggagttgaaaatagggtgtaggactaaaactccaaaaaacatgatagttcagatacggttttgttcgatttgaa 24335821  T
Q  125 agaagcagaacaatttttatgagctggtcaaaatg 159  Q
    ||| |||  || |||||  ||||||||||||||||    
T  24335820 agaggcatgaccattttcgtgagctggtcaaaatg 24335786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 172
Target Start/End: Original strand, 40160489 - 40160624
Alignment:
Q  37 tttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaac 135  Q
    |||||||  |||||||||||||||||||||||||| || ||||||||| |||||||||||| |||||| | | |||||||| |||||||||| |||  ||    
T  40160489 tttctctacgtttctggagttgaaaataggaggtaagactaaaactgcaaaaaacatgatagtttagg-acggttttgttcaatttgaaagaggcatgac 40160587  T
Q  136 aatttttatgagctggtcaaaatgtgatgaccaaaaa 172  Q
     |||||  |||| |||||||||||  | |||||||||    
T  40160588 tattttcgtgagttggtcaaaatgcaaggaccaaaaa 40160624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 229337 - 229174
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggag-gtaggaataaaactgcaaaaacatgataatttaggtatg 107  Q
    |||||||| ||| || |||||||||||| || | || |||| |||||||||||||| | | |||| | ||||||||||||||||||||| |||| | | |    
T  229337 agcataggtggttggactaaaactgtcacttttgtgcgtttatggagttgaaaataagggagtagaactaaaactgcaaaaacatgatagtttaaggacg 229238  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||||||| |||||||||| |||  || |||||   ||||||||||||||  || ||||||||    
T  229237 attttgttcaatttgaaagaggcaagaccattttcgcgagctggtcaaaatacgaggaccaaaa 229174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 34807293 - 34807173
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc--aaaaacatgataatttaggta 105  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| ||||| |||| ||||| |||||||||  |||||||| ||| |||||| |    
T  34807293 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaaaacat-atactttaggga 34807195  T
Q  106 tgattttgttcgatttgaaaga 127  Q
     ||||||||||||||| |||||    
T  34807194 cgattttgttcgatttaaaaga 34807173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 159
Target Start/End: Original strand, 35193702 - 35193823
Alignment:
Q  38 ttctctgtgtttctggagttgaaaataggaggtaggaataaaac-tgcaaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaaca 136  Q
    ||||||| |||||||||||||||||||||||||| || |||||| |  |||||||||||| |||||| | | ||||||| ||||||||||| |||| ||     
T  35193702 ttctctgcgtttctggagttgaaaataggaggtatgactaaaacatcaaaaaacatgatagtttagg-acggttttgttagatttgaaagaggcaggacc 35193800  T
Q  137 atttttatgagctggtcaaaatg 159  Q
    |||||  ||||||  ||||||||    
T  35193801 attttcgtgagcttatcaaaatg 35193823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 46193568 - 46193490
Alignment:
Q  23 gtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  46193568 gtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 46193490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 14440004 - 14439923
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| ||||| ||||||||||||||    
T  14440004 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa 14439923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 18965522 - 18965614
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaataggag-gtaggaataaaactgcaaaaacatgataatttaggtatgattttgttc 116  Q
    ||||||||||||||| | || |||| |||||||||||||||| | ||| || ||||||| ||||||||||||| |||||| | ||||||||||    
T  18965522 ctaaaactgtcatttatgtgcgtttatggagttgaaaataggggagtatgactaaaactacaaaaacatgatagtttaggaacgattttgttc 18965614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 28465257 - 28465138
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||||||||| |||| || || ||||||||| |||||||| ||| |||| | |     
T  28465257 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacat-atagtttaaggac 28465159  T
Q  107 gattttgttcgatttgaaaga 127  Q
    ||||||||||||||| |||||    
T  28465158 gattttgttcgatttaaaaga 28465138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 33690001 - 33689854
Alignment:
Q  12 atagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaacatgataatttaggtatgatt 110  Q
    ||||| ||| || |||| |||||||||| | || ||||||||||||| ||||| |||| || || ||||||||||||||||| ||| |||| | | ||||    
T  33690001 ataggtggttggactaacactgtcatttatgtgcgtttctggagttgtaaatagggagatatgactaaaactgcaaaaacat-atagtttaaggacgatt 33689903  T
Q  111 ttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    ||||||||||| ||||| | || || | |||| |||| |||||||||||    
T  33689902 ttgttcgatttaaaagaggtaggaccaattttgtgagttggtcaaaatg 33689854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 46737025 - 46737144
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| | ||||| || || || ||||||||| |||||||| ||| |||||| |     
T  46737025 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggagataggaagatatgactaaaactgcaaaaaacat-atagtttagggac 46737123  T
Q  107 gattttgttcgatttgaaaga 127  Q
    ||||||||||||||| |||||    
T  46737124 gattttgttcgatttaaaaga 46737144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 54440745 - 54440628
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaacatgataatttaggtatg 107  Q
    |||||||| ||| || ||||||||||||||||| ||  |||||| ||||||||||| |||| ||||| |||||||||||||  |  ||| |||||| | |    
T  54440745 agcataggtggttggactaaaactgtcatttctgtgcatttctgaagttgaaaatagggagataggactaaaactgcaaaa--aacatagtttagggacg 54440648  T
Q  108 attttgttcgatttgaaaga 127  Q
    |||||||||||||| |||||    
T  54440647 attttgttcgatttaaaaga 54440628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 12503805 - 12503851
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  12503805 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 12503851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 12593184 - 12593087
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgattt 121  Q
    ||||||||||||||||| || ||||||||||||||||||| |||| ||||| ||||| ||| |||||||| ||| |||| | | |||||||||||||||    
T  12593184 ctaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggattaaaattgcaaaaaacat-atagtttaaggacgattttgttcgattt 12593087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 14440198 - 14440311
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||||| || |||||| |||||| ||||| |||| || || ||||||||| |||||||| ||| |||| | ||    
T  14440198 agcataggtggttggactaaaactgtcatttctgtgcgtttctagagttggaaatagggagatatgactaaaactgcaaaaaacat-atagtttaaggat 14440296  T
Q  107 gattttgttcgattt 121  Q
    |||||||||||||||    
T  14440297 gattttgttcgattt 14440311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 22434340 - 22434290
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 74  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  22434340 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagga 22434290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 22434547 - 22434593
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  22434547 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 22434593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 171
Target Start/End: Complemental strand, 23986635 - 23986533
Alignment:
Q  70 taggaataaaactgcaaaaa-catgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgacca 168  Q
    ||||| |||||||||||||| ||||||| |||||| |   |||||||||||||||||||  ||  || |||||  ||||||||||||||||||| |||||    
T  23986635 taggactaaaactgcaaaaaacatgatagtttagggacagttttgttcgatttgaaagagacatgaccattttcgtgagctggtcaaaatgtgaggacca 23986536  T
Q  169 aaa 171  Q
    |||    
T  23986535 aaa 23986533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 45082606 - 45082560
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||    
T  45082606 agcatagggggtaggtctaaaattgtcatttctctgtgtttttggag 45082560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 48526565 - 48526615
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 74  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  48526565 ctaaaactgtcatttctctgtgtttatggagtttgaaaataggaggtagga 48526615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 12593409 - 12593474
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||||||||| || || ||||||||||||||||||| |||| ||||| ||||||||||||||    
T  12593409 ctaaaactgtcattcctgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaa 12593474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 16214865 - 16214946
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || |||||||| |||||| | |||||||||||||||||||||||| || ||| | ||||||||||||||    
T  16214865 agcataggtggttggactaaaactatcatttatgtgtgtttctggagttgaaaataggaagatagaattaaaactgcaaaaa 16214946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 21034606 - 21034687
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||| | |||||||||||||||| ||||| |||| ||| | ||||||||||||||    
T  21034606 agcataggtggttggactaaaactgtcatttttgtgtgtttctggagttggaaatagggagatagaactaaaactgcaaaaa 21034687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 35643743 - 35643662
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||||| || |||| |||||||| ||||| |||| ||||| ||||||||||||||    
T  35643743 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttgtaaatagggagataggactaaaactgcaaaaa 35643662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 45838933 - 45838998
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa 89  Q
    ||||||||||||||||| || ||||||||||||| ||||||| || ||||| ||||||||||||||    
T  45838933 ctaaaactgtcatttctgtgcgtttctggagttggaaataggaagataggactaaaactgcaaaaa 45838998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 46736815 - 46736750
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    ||||||||||||||||| || ||||||||||||||||||| |||| ||||| |||| |||||||||    
T  46736815 ctaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggattaaatctgcaaaaa 46736750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 11153307 - 11153231
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| |||||||| | |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  11153307 ctaaaactgtcatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 11153231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 12503597 - 12503521
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  12503597 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 12503521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 15523395 - 15523331
Alignment:
Q  26 taaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaaaaa 89  Q
    ||||||||||||||||||| |||||| ||| |||||||||||||||||||  |||| ||||||||    
T  15523395 taaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaaaaa 15523331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 20470895 - 20470971
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||| ||||||||||| |||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  20470895 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 20470971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 45082808 - 45082884
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  45082808 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 45082884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 15523602 - 15523649
Alignment:
Q  8 aagcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||||||||||||||| || |||| |||||    
T  15523602 aagcatagggggtaggtctaaaactgtcatttctttgcgtttttggag 15523649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 22170306 - 22170397
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||||||| |||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  22170306 agcatagggggtacgtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 22170397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 25938056 - 25938131
Alignment:
Q  26 taaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  25938056 taaaactgccatttctttgtgtttctggagtttgaaaataggaggtaggacaaaaaatgcaacaaaaatgataatt 25938131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 33109860 - 33109769
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  33109860 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 33109769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 51021180 - 51021255
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggaataaaactgcaaaaacatgataatt 99  Q
    |||||| || |||||||||| |||||||||||| |||||||||||||||||  |||| ||||| || |||||||||    
T  51021180 ctaaaattgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaatgataatt 51021255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 19529030 - 19528926
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc--aaaaacatgataatttaggtatgattttgttcgattt 121  Q
    ||||||||||||||||| || ||||| ||||||| ||||| |||| ||||| |||||||||  |||||||| ||| |||||| | |||||| ||||||||    
T  19529030 ctaaaactgtcatttctgtgcgtttccggagttggaaatagggagataggactaaaactgcaaaaaaacat-atagtttagggacgattttattcgattt 19528932  T
Q  122 gaaaga 127  Q
     |||||    
T  19528931 aaaaga 19528926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 24851851 - 24851955
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggaataaaactgc--aaaaacatgataatttaggtatgattttgttcgattt 121  Q
    |||||||| |||||||| || ||||||||||||| ||||||  || ||||| |||||||||  |||||||| ||| |||||| | |||||||||||||||    
T  24851851 ctaaaactttcatttctgtgcgtttctggagttggaaatagaaagataggactaaaactgcaaaaaaacat-atagtttagggacgattttgttcgattt 24851949  T
Q  122 gaaaga 127  Q
     |||||    
T  24851950 aaaaga 24851955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 25937846 - 25937800
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||| ||||||||||||||||||||||||||||| |||| |||||    
T  25937846 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggag 25937800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 34789752 - 34789872
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc--aaaaacatgataatttaggta 105  Q
    |||||||| ||| || ||||||||||||||| | || |||| |||||||| ||||| |||| ||||| |||||||||  |||||||| ||| |||||| |    
T  34789752 agcataggtggttggactaaaactgtcatttatgtgcgtttttggagttggaaatagggagataggactaaaactgcaaaaaaacat-atagtttaggga 34789850  T
Q  106 tgattttgttcgatttgaaaga 127  Q
      |||||||||||||| |||||    
T  34789851 caattttgttcgatttaaaaga 34789872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 51020973 - 51020939
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctct 43  Q
    |||||||||||||||||||||||||||||||||||    
T  51020973 agcatagggggtaggtctaaaactgtcatttctct 51020939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 6616849 - 6616768
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||| |||||| ||||||||| ||| || |||||||    
T  6616849 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagagaggtaggactaacacagcaaaaa 6616768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 18751971 - 18752036
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtagga 74  Q
    |||||||||||||||||||||||||| |||||||||  ||| |||||   |||||||| |||||||    
T  18751971 agcatagggggtaggtctaaaactgttatttctctgcatttttggagaataaaatagggggtagga 18752036  T

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Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 26974444 - 26974379
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    ||||||||||||||||| || ||||||||||||| ||||| |||| ||||| |||||||| |||||    
T  26974444 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgtaaaaa 26974379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 41608551 - 41608470
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||||| || |||| || ||||| ||||| |||| ||||| ||||||||||||||    
T  41608551 agcataggtggttggactaaaactgtcatttctgtgcgtttttgaagttggaaatatggagataggactaaaactgcaaaaa 41608470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 56077695 - 56077807
Alignment:
Q  10 gcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatg 107  Q
    ||||||| ||| || ||||||||||||||| | || |||||| |||||| ||||| |||| ||||| ||||||||| |||||||| ||| |||| | | |    
T  56077695 gcataggtggttggactaaaactgtcatttttgtgcgtttctagagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggacg 56077793  T
Q  108 attttgttcgattt 121  Q
    ||||||||||||||    
T  56077794 attttgttcgattt 56077807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 12234713 - 12234789
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||||||||||||||  ||||||| | |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  12234713 ctaaaactgtcatttctctgcatttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 12234789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 25447408 - 25447332
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||| ||||||||||||| |||| ||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  25447408 ctaaaattgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 25447332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 54995230 - 54995154
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||   ||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  54995230 ctaaaactgtcatttctctacatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 54995154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 4219733 - 4219642
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||| ||||| ||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  4219733 agcataggggataggtttaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 4219642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 12234505 - 12234414
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||| ||||||||| ||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  12234505 agcatagggggtaggtttaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 12234414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 24851639 - 24851560
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||| ||| || ||||||||||||||| | || ||||||||||||| ||||| |||| || || ||||||||||||||    
T  24851639 cataggtggttggactaaaactgtcatttttgtgcgtttctggagttggaaatagggagataagactaaaactgcaaaaa 24851560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 34807525 - 34807619
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactg-caaaaacatgataatttaggtatgattttgttcga 118  Q
    ||||||||||||||||| || |||| |||||||| ||||| |||| ||||| |||||||| ||||||||| ||| |||| | | ||||||||||||    
T  34807525 ctaaaactgtcatttctatgcgtttatggagttggaaatagggagataggactaaaactgccaaaaacat-atagtttaaggacgattttgttcga 34807619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 46193774 - 46193865
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||||| ||||||  |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  46193774 agcatagggggtaggtctaaaactgtcaattctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataatt 46193865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 48526371 - 48526336
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctg 44  Q
    |||||||||||||| |||||||||||||||||||||    
T  48526371 agcatagggggtagatctaaaactgtcatttctctg 48526336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 2118665 - 2118711
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||||| | ||||||||| |||| |||||    
T  2118665 agcatagggggtaggtctaaaactattatttctctgcgtttttggag 2118711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 11153516 - 11153562
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    ||||||||||||| |||||||||||| ||||||||| |||| |||||    
T  11153516 agcatagggggtaagtctaaaactgttatttctctgcgtttttggag 11153562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 34789558 - 34789445
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || |||||| |||||||| | || ||||||||||||  ||||| |||| ||||| ||||||||| |||||||| ||| |||| | |     
T  34789558 agcataggtggttggactaaaattgtcatttatgtgcgtttctggagtttgaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggac 34789460  T
Q  107 gattttgttcgattt 121  Q
    |||||||||||||||    
T  34789459 gattttgttcgattt 34789445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 51309952 - 51310038
Alignment:
Q  85 aaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    |||||||||||| |||||| |   ||||||||||||||||||| |||  || |||||  ||||||||| |||||| || ||||||||    
T  51309952 aaaaacatgatagtttagggactgttttgttcgatttgaaagaggcatgaccattttcgtgagctggtaaaaatgcgaggaccaaaa 51310038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 54440939 - 54441052
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||    || ||||||||||||| ||||| |||| ||||| ||||||||| |||||||| ||| |||| | |     
T  54440939 agcataggtggttggactaaaactgtcattgacgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaaggac 54441037  T
Q  107 gattttgttcgattt 121  Q
    |||||||||||||||    
T  54441038 gattttgttcgattt 54441052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 38962195 - 38962228
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgtgttt 49  Q
    ||||||||||||||||||||||||||||| ||||    
T  38962195 ggggtaggtctaaaactgtcatttctctgcgttt 38962228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 2118454 - 2118378
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||  ||||||||| ||||||| |||| |||||||||||||||||  |||| ||||| ||| |||||||||    
T  2118454 ctaaaactgcaatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 2118378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 4219943 - 4220019
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||| ||||||||| |||| || |||| |||||||||||||||||  |||| ||||| ||| |||||||||    
T  4219943 ctaaaactgttatttctctgcgtttttgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 4220019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 25447611 - 25447651
Alignment:
Q  15 gggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||| ||||||||| |||| |||||    
T  25447611 gggggtaggtctaaaactgtaatttctctgcgtttttggag 25447651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 28166163 - 28166099
Alignment:
Q  26 taaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    ||||||| |||||||| || |||| || ||||||||||| |||| ||||| ||||||||||||||    
T  28166163 taaaactatcatttctgtgcgtttttgtagttgaaaatagggagataggactaaaactgcaaaaa 28166099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 45838723 - 45838604
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa-catgataatttaggtat 106  Q
    |||||||| ||| || | |||||| |||||||| || |||| || ||| | ||||||| || ||||| |||||||||||||| ||| ||| |||||| |     
T  45838723 agcataggtggttggacaaaaactatcatttctgtgcgtttttgaagtaggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggac 45838625  T
Q  107 gattttgttcgatttgaaaga 127  Q
    ||||||||||||||| |||||    
T  45838624 gattttgttcgatttaaaaga 45838604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 39485240 - 39485078
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgca-aaaacatgataatttaggtatg 107  Q
    |||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| |||||||||| ||||||| ||| |||||| | |    
T  39485240 agcatatggggtaggtctaaaactgtcatctctctgtgtttctgaagttgaaaataggagataggactaaaactgcaaaaaacat-atagtttagggacg 39485142  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    |||||||||||||||||||| | || || |||||  |||||| ||||||||| || ||||||||    
T  39485141 attttgttcgatttgaaagaggtaggaccattttcgtgagctagtcaaaatgcgaggaccaaaa 39485078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 169
Target Start/End: Complemental strand, 17088326 - 17088161
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc------aaaaacatgataatttag 102  Q
    |||||||| |||||||||||||||| ||||||||||  |||||| ||||||||||||||||||||| ||||| |||      |||||||||||| |||||    
T  17088326 agcataggaggtaggtctaaaactgccatttctctgcatttctgaagttgaaaataggaggtaggactaaaattgcaaaaaaaaaaacatgatagtttag 17088227  T
Q  103 gtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaa 169  Q
    | | | ||||||||||||||||||| ||| ||| |||||  |||||||||||||||| |||||||||    
T  17088226 g-acggttttgttcgatttgaaagaggcaaaaccattttcgtgagctggtcaaaatgcgatgaccaa 17088161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 29021234 - 29021398
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaa--catgataatttaggtat 106  Q
    |||||||| ||| || | ||||||||||||| | || ||||||||||||||||||||| |||| || ||||||||||||||  | |||||||||||| |     
T  29021234 agcataggtggttggacaaaaactgtcatttatgtgcgtttctggagttgaaaatagggggtaagactaaaactgcaaaaaaccgtgataatttagggac 29021333  T
Q  107 gattttgttcgatttgaaagaagca-gaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||||||||||||||||||| ||| |||| |||||  ||||||||||||||||||| ||||||||    
T  29021334 gattttgttcgatttgaaagaggcatgaac-attttcgtgagctggtcaaaatgtgaggaccaaaa 29021398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 28 - 171
Target Start/End: Complemental strand, 23526815 - 23526671
Alignment:
Q  28 aaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaa-taaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaag 126  Q
    |||||||||||||| || |||| |||||||||||||||| || ||| | |||||||||||||| |||||| | |||| ||||||||||||||||| ||||    
T  23526815 aaactgtcatttctgtgcgtttttggagttgaaaatagggggcagggactaaaactgcaaaaaaatgatagtctagggatgattttgttcgatttaaaag 23526716  T
Q  127 aagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    | |||| || |||||  ||||||||||||||||||| ||||||||    
T  23526715 aggcaggaccattttcgtgagctggtcaaaatgtgaggaccaaaa 23526671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 44802555 - 44802692
Alignment:
Q  23 gtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgattt 121  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||| | ||||||||||  |||    
T  44802555 gtctaaaattgtcatttttctgtgtttctggagttgaaaataggaggtagaactaaaactgcaaaaaacatgatagtttagggacgattttgttccgttt 44802654  T
Q  122 gaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    |||||| |||  || | |||  ||||||||||||||||    
T  44802655 gaaagaggcatgaccactttcgtgagctggtcaaaatg 44802692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 156
Target Start/End: Original strand, 9833522 - 9833670
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc-aaaaacatgataatttaggtatg 107  Q
    |||||||| |||||| |||||| ||| |||||| || ||||||||||||||||||||| ||||||| ||||||||| |||||||| ||| |||||| | |    
T  9833522 agcataggtggtaggactaaaaatgttatttctgtgcgtttctggagttgaaaatagggggtaggactaaaactgcaaaaaacataatattttagggacg 9833621  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaa 156  Q
    |||||||||||||||||||| |||  || |||||  |||| ||||||||    
T  9833622 attttgttcgatttgaaagaggcatgactattttcgtgagttggtcaaa 9833670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 171
Target Start/End: Original strand, 17088516 - 17088672
Alignment:
Q  15 gggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaacatgataatttaggtatgattttgt 114  Q
    |||||||||||||||||||||||||||||| |||||| || ||||||||||||||||| | ||||||||||||||    ||| |||||| | | ||||||    
T  17088516 gggggtaggtctaaaactgtcatttctctgcgtttctagatttgaaaataggaggtagaactaaaactgcaaaaaatatatagtttagggacggttttgt 17088615  T
Q  115 tcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    | ||||||||||| |||  || |||||  ||||||| |||||||| || ||||||||    
T  17088616 ttgatttgaaagaggcatgaccattttcgtgagctgttcaaaatgagaggaccaaaa 17088672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 50926611 - 50926774
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggta-ggaataaaactgcaaaaacatgataatttaggtatg 107  Q
    |||||||| ||| || ||||||||  ||||| | ||||||| |||||||||||||||| |||| ||| |||||||||||||| |||||| |||||| | |    
T  50926611 agcataggtggttggactaaaactaccatttatgtgtgtttatggagttgaaaatagggggtaaggactaaaactgcaaaaaaatgatagtttagggacg 50926710  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
     |||||||||||||||||||  | | || |||||  |||||||||||||||| |||||||||||    
T  50926711 gttttgttcgatttgaaagagacgggaccattttcgtgagctggtcaaaatgcgatgaccaaaa 50926774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 25 - 159
Target Start/End: Complemental strand, 48173909 - 48173773
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaa--catgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||| |  | |||| |||||||||||||||| |||| || ||||| ||||||||  ||||||||||||||   ||||||||||||||||    
T  48173909 ctaaaactgtcatttatgagagtttttggagttgaaaatagggggtatgactaaaagtgcaaaaaaacatgataatttagggtcgattttgttcgatttg 48173810  T
Q  123 aaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    ||||| ||||||| |||||| ||| ||||||||||||    
T  48173809 aaagaggcagaaccatttttgtgaactggtcaaaatg 48173773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 50926408 - 50926243
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggt-aggaataaaactgc--aaaaacatgataatttaggta 105  Q
    |||||||| ||| || ||||||||  ||||| | |||||||||||||||||||||||||||| |||| |||||||||  ||||| |||||| |||||| |    
T  50926408 agcataggtggttggactaaaactaccatttatgtgtgtttctggagttgaaaataggaggtaaggactaaaactgcaaaaaaaaatgatagtttaggga 50926309  T
Q  106 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
     ||||||||||||||||||||| | |  |  |||||  |||||||||||||||| || ||||||||    
T  50926308 cgattttgttcgatttgaaagaggtatgattattttcgtgagctggtcaaaatgggaggaccaaaa 50926243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 45048533 - 45048668
Alignment:
Q  36 atttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaa 134  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||| | | |||||||||||| |||||| | |  |    
T  45048533 atttctctgcgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgatagtttagg-acggttttgttcgattggaaagaggtatga 45048631  T
Q  135 caatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    | |||||  ||| |||||||||||| || ||||||||    
T  45048632 ccattttcgtgaactggtcaaaatgcgaggaccaaaa 45048668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 45048330 - 45048180
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgca-aaaacatgataatttaggtatg 107  Q
    ||||||| ||||| |||||||||||| |||||| || ||||||||||||||||||| ||||||||| |||||||||| ||||||| ||| |||| | | |    
T  45048330 agcatagagggtaagtctaaaactgttatttctatgcgtttctggagttgaaaatatgaggtaggactaaaactgcaaaaaacat-atagtttatggacg 45048232  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    ||||||||| |||| ||||| | ||||| |||||  | || |||||||||||    
T  45048231 attttgttcaatttaaaagaggtagaaccattttcgtaagttggtcaaaatg 45048180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 171
Target Start/End: Complemental strand, 44291442 - 44291314
Alignment:
Q  46 gtttctggagttgaaaataggaggtaggaataaaactgcaaaaa---catgataatttaggtatgattttgttcgatttgaaagaagcagaacaattttt 142  Q
    ||||||||| ||||||| |||||||| || ||||||||||||||   ||||||| |||| | | |||||||||| |||||||||| ||| ||| |||||     
T  44291442 gtttctggatttgaaaacaggaggtatgactaaaactgcaaaaaaaacatgatagtttatggacgattttgttcaatttgaaagaggcataaccattttc 44291343  T
Q  143 atgagctggtcaaaatgtgatgaccaaaa 171  Q
     ||||||||||||||||||| ||||||||    
T  44291342 gtgagctggtcaaaatgtgaggaccaaaa 44291314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 29 - 158
Target Start/End: Original strand, 44291701 - 44291831
Alignment:
Q  29 aactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc-aaaaacatgataatttaggt-atgattttgttcgatttgaaag 126  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| | |||||| | |||||| |||||||| ||||    
T  44291701 aactgccatttctatgtgtttctggagttgaaaatagggggtaggactaaaactgcaaaaaacatgat-agttaggtgacgattttattcgatttaaaag 44291799  T
Q  127 aagcagaacaatttttatgagctggtcaaaat 158  Q
    |  ||  || ||||| ||||||||||||||||    
T  44291800 agacatgaccattttcatgagctggtcaaaat 44291831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 158
Target Start/End: Complemental strand, 29021056 - 29020906
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaa-catgataatttaggtatg 107  Q
    ||||||| ||||||| ||||||||| ||||| | || |||| ||||| ||||||||||  |||  | ||||| |||||||| |||||||||||| | |||    
T  29021056 agcatagcgggtaggactaaaactgacatttatgtgcgtttttggaggtgaaaatagggagtaacactaaaattgcaaaaaacatgataatttaaggatg 29020957  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaat 158  Q
    |||||||||||||| |||||  ||  || |||||||||||||| |||||||    
T  29020956 attttgttcgatttaaaagagacatgaccatttttatgagctgatcaaaat 29020906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 29307317 - 29307402
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  29307317 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 29307402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 9992331 - 9992250
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||||| |||||||||||||||| ||||| |||| ||||| ||||||||||||||    
T  9992331 agcataggtggtcggactaaaactgtcatttctgtgtgtttctggagttggaaatagggagataggactaaaactgcaaaaa 9992250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 159
Target Start/End: Original strand, 52335896 - 52336031
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaacatgataatttaggtatgattttgttcgatttga 123  Q
    ||||||||||||||| | || ||||||||||||| ||||||| || || || |||||||||||||| |  ||| |||||| | ||||||||||||||| |    
T  52335896 ctaaaactgtcatttatgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaaaatatagtttagggacgattttgttcgatttaa 52335995  T
Q  124 aagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    |||| | || || | ||| ||||| |||||||||||    
T  52335996 aagaggtaggaccaatttcatgagttggtcaaaatg 52336031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 8230013 - 8230130
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggagg-taggaataaaactgc-aaaaacatgataatttaggtatga 108  Q
    |||||| ||| || ||||||||||||||||| || ||||||||||||| ||||||| || || || ||||||||| |||||||| ||| |||||| | ||    
T  8230013 cataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacat-atagtttagggacga 8230111  T
Q  109 ttttgttcgatttgaaaga 127  Q
    ||||||||||||| |||||    
T  8230112 ttttgttcgatttaaaaga 8230130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 1837681 - 1837562
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||||||||| |||| || || ||||||||| |||||||| ||| |||||| |     
T  1837681 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatatgactaaaactgcaaaaaacat-atagtttagggac 1837583  T
Q  107 gattttgttcgatttgaaaga 127  Q
     |||||||||||||| |||||    
T  1837582 aattttgttcgatttaaaaga 1837562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 37505438 - 37505522
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaacat 92  Q
    |||||||| ||| || ||||||||||||||| | || |||| |||||||||||||| |||| ||||| |||||||||||||||||    
T  37505438 agcataggtggttggactaaaactgtcatttttgtgcgtttttggagttgaaaatagggagataggactaaaactgcaaaaacat 37505522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 44954612 - 44954759
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||||| || ||||||||||||| ||||| |||| ||||| ||||||||| |||||||| ||| |||| | ||||||||||| |||||     
T  44954612 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttatggatgattttgtttgattta 44954710  T
Q  123 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||| | | |  |  ||||| ||||| ||||||||||| || ||||||||    
T  44954711 aaaaaggtatgatcattttcatgagttggtcaaaatgcgaggaccaaaa 44954759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 5962947 - 5963038
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  5962947 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 5963038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 15173272 - 15173181
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  15173272 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 15173181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 50970647 - 50970738
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  50970647 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 50970738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 17433597 - 17433675
Alignment:
Q  23 gtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||| ||||||| || |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  17433597 gtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 17433675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 21856412 - 21856458
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  21856412 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 21856458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 21938739 - 21938626
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||||| || |||| |||||||| ||||| |||| ||||| ||||||||| |||||||| ||| |||| | |     
T  21938739 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttatggac 21938641  T
Q  107 gattttgttcgattt 121  Q
    |||||||||||||||    
T  21938640 gattttgttcgattt 21938626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 29869796 - 29869750
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  29869796 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 29869750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 159
Target Start/End: Complemental strand, 6224859 - 6224722
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggaataaaactgcaaaaac-atg-ataatttaggtatgattttgttcgattt 121  Q
    ||||||||||||||| | || ||||||||||||| |||||| ||| || || |||||||| |||||  ||  |||||||| | | |||||||||||||||    
T  6224859 ctaaaactgtcatttatgtgcgtttctggagttggaaatagagagataagactaaaactgtaaaaaatatatataatttaaggacgattttgttcgattt 6224760  T
Q  122 gaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
     ||| ||  ||||| ||||||||||| |||||||||||    
T  6224759 aaaaaaacaagaaccatttttatgagttggtcaaaatg 6224722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 9019338 - 9019423
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||| |||||||||||||| ||||||||| |||||||| | |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  9019338 ggggcaggtctaaaactgttatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 9019423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 17641750 - 17641815
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    ||||||||||||||||| || ||||||||||||| ||||| |||| ||||| ||||||||||||||    
T  17641750 ctaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa 17641815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 171
Target Start/End: Original strand, 23526942 - 23527063
Alignment:
Q  51 tggagttgaaaataggaggta-ggaataaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagct 149  Q
    |||||||||||||||| || | ||| |||||||||||||| |||||| |||||  | | ||||||||||||| ||| | |||  || ||||| |||||||    
T  23526942 tggagttgaaaatagggggcacggactaaaactgcaaaaaaatgatagtttagagacggttttgttcgatttaaaaaaggcatgaccattttcatgagct 23527041  T
Q  150 ggtcaaaatgtgatgaccaaaa 171  Q
    | ||||||||||| || |||||    
T  23527042 gatcaaaatgtgaggatcaaaa 23527063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 159
Target Start/End: Complemental strand, 30786932 - 30786796
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa-catgataatttaggtatgattttgttcgatttg 122  Q
    ||||||| ||||||||| || |||| |||||||| ||||||| || ||||| |||||||||||||| ||| ||| |||||| | |||||||||||||||     
T  30786932 ctaaaaccgtcatttctgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgattta 30786834  T
Q  123 aaagaagca-gaacaatttttatgagctggtcaaaatg 159  Q
    ||||| | | || |||||||  |||| |||||||||||    
T  30786833 aaagaggtaggaccaattttcgtgagttggtcaaaatg 30786796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 34555750 - 34555831
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| || || ||||||||||||||    
T  34555750 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaa 34555831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 5962739 - 5962691
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtag 72  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||    
T  5962739 ctaaaactgtcattactctgtgtttctggagtttgaaaataggaggtag 5962691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 18984503 - 18984579
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  18984503 ctaaaactgccatttctctgtgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 18984579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 21856203 - 21856127
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| |||||  |||| ||||| ||| |||||||||    
T  21856203 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaatgataatt 21856127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 8678911 - 8678946
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctg 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  8678911 agcatagggggtaggtctaaaactgtcatttctctg 8678946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 33144287 - 33144334
Alignment:
Q  8 aagcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||| |||||||||||||||||||||||||||| |||| |||||    
T  33144287 aagcatagagggtaggtctaaaactgtcatttctctgcgtttttggag 33144334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 4636146 - 4636108
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgttt 49  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  4636146 catagggggtaggtctaaaactgtcatttctctgcgttt 4636108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 10278725 - 10278605
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaat-aggaggtaggaataaaactgc--aaaaacatgataatttaggta 105  Q
    |||||||| ||| || |||||| |||||||| | || ||||||||||||| ||||  |||| ||||| |||||||||  |||||||| ||| |||||| |    
T  10278725 agcataggtggttggactaaaattgtcatttatgtgcgtttctggagttgcaaatggggagataggactaaaactgcaaaaaaacat-atagtttaggga 10278627  T
Q  106 tgattttgttcgatttgaaaga 127  Q
     ||||||||||||||| |||||    
T  10278626 cgattttgttcgatttaaaaga 10278605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 10278936 - 10279030
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaacatgataatttaggtatgattttgttcgattt 121  Q
    ||||||||||||||||| |||||||||||||||| | ||| |||| ||||| ||||||||  ||||||| ||| |||| | | |||||||||||||||    
T  10278936 ctaaaactgtcatttctgtgtgtttctggagttggatatatggagataggactaaaactg--aaaacat-atagtttaaggacgattttgttcgattt 10279030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 17433392 - 17433346
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||| ||||||||||||||||||||||||| |||| |||||    
T  17433392 agcataggggataggtctaaaactgtcatttctctgcgtttttggag 17433346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 33144078 - 33144028
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 74  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||||    
T  33144078 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtagga 33144028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 50970437 - 50970363
Alignment:
Q  27 aaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||| |||||||||| |||||||||| ||||||||  |||| ||||| ||| |||||||||    
T  50970437 aaaactgtcatttctctgcgtttctggagtttgaaaatagaaggtaggacgaaaaatgcaacaaaaatgataatt 50970363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 8229800 - 8229735
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    ||||||||||||||||| || ||||||||||||  ||||| |||| ||||| ||||||||||||||    
T  8229800 ctaaaactgtcatttctgtgcgtttctggagttagaaatagggagataggactaaaactgcaaaaa 8229735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 9992542 - 9992638
Alignment:
Q  26 taaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgattt 121  Q
    ||||||||||||||||  | ||||||||||||||||||| |||| ||||| ||| ||||| |||||||| ||| |||| | | |||||||||||||||    
T  9992542 taaaactgtcatttctacgcgtttctggagttgaaaatagggagataggactaatactgcaaaaaacat-atagtttaagcacgattttgttcgattt 9992638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 16299068 - 16299133
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||| |||||||||| || ||||||||||||| ||||| |||| ||||| ||||||||||||||    
T  16299068 ctaaaattgtcatttctgtgcgtttctggagttggaaatatggagataggactaaaactgcaaaaa 16299133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 443921 - 444040
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||| |  | |||| |||| ||| ||||| |||| ||||| ||||||||| |||||||| ||| |||||| |     
T  443921 agcataggtggttggactaaaactgtcatttatgcgcgtttatggaattggaaatagggagataggactaaaactgcaaaaaacat-atagtttaggaac 444019  T
Q  107 gattttgttcgatttgaaaga 127  Q
    ||||||||||||||| |||||    
T  444020 gattttgttcgatttaaaaga 444040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 171
Target Start/End: Original strand, 2868094 - 2868241
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaataggagg-taggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 122  Q
    |||||||||||| || | || ||||||||||||| ||||||| || || || ||||||||| |||||||| ||| | |||| | |||||||||||||||     
T  2868094 ctaaaactgtcacttatgtgcgtttctggagttggaaatagggggatatgactaaaactgcaaaaaacat-atagtgtagggacgattttgttcgattta 2868192  T
Q  123 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||| | || || |||||  || | |||||||||||||| || |||||    
T  2868193 aaagaggtaggaccattttcgtgtgttggtcaaaatgtgaggatcaaaa 2868241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 5540194 - 5540278
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  5540194 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 5540278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 15173478 - 15173554
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| |||| | ||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  15173478 ctaaaactgtcatttctctgcgtttatagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 15173554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 15646571 - 15646655
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  15646571 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaggacgaaaaatgcaacaaaaatgataatt 15646655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 16298858 - 16298739
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa-catgataatttaggtat 106  Q
    |||||||| ||| || |||||||| |||||| | || |||||  |||||| ||||||| || ||||| |||||||||||||| ||| ||| |||||| |     
T  16298858 agcataggtggttggactaaaactatcatttatttgcgtttccagagttggaaataggtagataggactaaaactgcaaaaaacat-atagtttagggac 16298760  T
Q  107 gattttgttcgatttgaaaga 127  Q
    ||||||||||||||| |||||    
T  16298759 gattttgttcgatttaaaaga 16298739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 17112442 - 17112366
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||| |||||| |||| |||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  17112442 ctaaaactatcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaataaaaatgataatt 17112366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 29307122 - 29307038
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  29307122 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 29307038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 29870003 - 29870079
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||| ||||||  || |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  29870003 ctaaaactgtcatttctctgcgtttctaaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 29870079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 34555541 - 34555436
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactg---caaaaacatgataatttaggtatgattttgttcgatt 120  Q
    |||||||| |||||||| || ||||||||||||| ||||| |||| ||||| ||||||||    |||||||| ||| |||||| | ||||||||||||||    
T  34555541 ctaaaactatcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgtaaaaaaaacat-atagtttagggacgattttgttcgatt 34555443  T
Q  121 tgaaaga 127  Q
    | |||||    
T  34555442 taaaaga 34555436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 39154404 - 39154480
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||| ||||||||||||| ||||||| || |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  39154404 ctaaaattgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 39154480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 50305169 - 50305233
Alignment:
Q  26 taaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||||||||| | ||||||| |||||||||||||| |||| || || ||||||||||||||    
T  50305169 taaaactgtcatttatgtgtgtttatggagttgaaaatagggagatatgactaaaactgcaaaaa 50305233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 4636356 - 4636431
Alignment:
Q  26 taaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||| |||  |||| ||||| ||| |||||||||    
T  4636356 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataatt 4636431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 18984295 - 18984204
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||| ||||||||||||| ||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  18984295 agcataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 18984204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 1744500 - 1744422
Alignment:
Q  12 atagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    ||||| ||| || ||||||||||||||| | || ||||||||||||| ||||| |||| || || ||||||||||||||    
T  1744500 ataggtggttggactaaaactgtcatttatgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaa 1744422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 25274831 - 25274769
Alignment:
Q  109 ttttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||||||||||||||||| |||  || |||||  |||||||||||||||| || ||||||||    
T  25274831 ttttgttcgatttgaaagaggcatgaccattttcgtgagctggtcaaaatgcgaggaccaaaa 25274769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 29439107 - 29438987
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggaataaaactgcaaaaa--catgataatttaggta 105  Q
    |||||||| ||| || |||||||||| |||| | ||||||| | || |||||||||| ||| ||||| ||||||||||||||  |||  || |||||| |    
T  29439107 agcataggtggttggactaaaactgttatttttgtgtgttttttgaattgaaaatagagagataggactaaaactgcaaaaaaacatt-tagtttaggga 29439009  T
Q  106 tgattttgttcgatttgaaaga 127  Q
     ||||||||||||||| |||||    
T  29439008 cgattttgttcgatttaaaaga 29438987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 15646353 - 15646260
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatttaggtatgattttgttc 116  Q
    ||||||||||||||||||||  ||| ||||| ||||||||| |||||||||  |||| ||||| ||| ||||||||| | |||  |||||||||    
T  15646353 ctaaaactgtcatttctctgcatttatggagtttgaaaatatgaggtaggacgaaaaatgcaacaaaaatgataattgaagtaccattttgttc 15646260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 23340343 - 23340278
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaat-aggaggtaggaataaaactgcaaaaa 89  Q
    |||||||||||||||||  | ||||||||||||| |||| ||||| || || ||||||||||||||    
T  23340343 ctaaaactgtcatttctgagcgtttctggagttggaaataaggagatatgactaaaactgcaaaaa 23340278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 30787158 - 30787199
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg 66  Q
    ||||||||||||||||||||  ||| ||||||||||||||||    
T  30787158 ctaaaactgtcatttctctgcatttatggagttgaaaatagg 30787199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 44954386 - 44954321
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggaataaaactgcaaaaa 89  Q
    ||||||||||||||||| || ||||||||||||| ||| || ||| || || ||||||||||||||    
T  44954386 ctaaaactgtcatttctgtgcgtttctggagttggaaacagagagatacgactaaaactgcaaaaa 44954321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 8678702 - 8678626
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||||||||||| || ||||||| || |||||||||| ||||||||  |||| ||||| ||| |||||||||    
T  8678702 ctaaaactgtcatttctttgcgtttctgaagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataatt 8678626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 37421322 - 37421217
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc---aaaaacatgataatttaggtatgattttgttcgatt 120  Q
    ||||||||||||||||| || |||| |||||||| ||||| |||  || || |||||||||   |||||||| ||| |||||| | ||||||||||||||    
T  37421322 ctaaaactgtcatttctgtgcgtttttggagttggaaatagggaaatatgactaaaactgcaaaaaaaacat-atagtttagggacgattttgttcgatt 37421224  T
Q  121 tgaaaga 127  Q
    | |||||    
T  37421223 taaaaga 37421217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 44582233 - 44582114
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggaataaaactgcaaaaa-catgataatttaggtat 106  Q
    |||||||| ||| || |||||| |||||||| | || |||| |||||||| ||| |  ||| ||||| |||||||||||||| ||| |||||||||  |     
T  44582233 agcataggtggttggactaaaattgtcatttatgtgcgtttatggagttggaaacaaagagataggactaaaactgcaaaaaacat-ataatttagagac 44582135  T
Q  107 gattttgttcgatttgaaaga 127  Q
    ||||||||||||||| |||||    
T  44582134 gattttgttcgatttaaaaga 44582114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 15288 - 15126
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaacatgataatttaggtatga 108  Q
    |||||| ||| ||||||||||| ||| |||||| || |||| || |||||||||||||||||| ||  |||||||||||||||||||| ||||||  ||     
T  15288 agcataagggataggtctaaaattgttatttctgtgcgtttatgaagttgaaaataggaggtaagacaaaaactgcaaaaacatgatagtttagggttgt 15189  T
Q  109 ttttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||||||||||||||||| ||||||  |||||   ||||||||||||||| |||||||||||    
T  15188 ttttgttcgatttgaaagaggcagaatcattttcgcgagctggtcaaaatgcgatgaccaaaa 15126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 172
Target Start/End: Original strand, 15506 - 15632
Alignment:
Q  46 gtttctggagttgaaaataggaggtaggaataaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatg 145  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||||| |||||| |   |||||||||||||||||||  ||| || |||||  ||    
T  15506 gtttctggagttgaaaataggaggtatgactaaaactacaaaaacatgatagtttagggacagttttgttcgatttgaaagagtcaggaccattttcgtg 15605  T
Q  146 agctggtcaaaatgtgatgaccaaaaa 172  Q
    ||||| |||||||| ||  ||||||||    
T  15606 agctgatcaaaatgcgagaaccaaaaa 15632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 171
Target Start/End: Complemental strand, 28877077 - 28876916
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaat-aaaactgcaaaaacatgataatttaggtatgat 109  Q
    ||||||||||||||||||| || || |||||||| |||||| |||||||||||| || ||| || | |||||| ||||||||||||| |||||| | |||    
T  28877077 catagggggtaggtctaaagctatcgtttctctgcgtttcttgagttgaaaataagaagtaagatttaaaactacaaaaacatgatagtttagggacgat 28876978  T
Q  110 tttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    |||||||||||||||||| ||||||  |||||  ||||||| |||||||| || ||||||||    
T  28876977 tttgttcgatttgaaagaggcagaattattttcgtgagctgatcaaaatgcgaggaccaaaa 28876916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 18805337 - 18805266
Alignment:
Q  10 gcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaac 81  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  18805337 gcatagggggtaagtctaaaactgtcatttctctgtgtttctggagttgaagataggaggtaggactaaaac 18805266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 28877260 - 28877422
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgc-aaaaacatgataatttaggtatg 107  Q
    |||||||| ||||||||||||| |||||||| | |  |||||||||||| ||||||| |||||||| |||||| || ||||||||||| | ||||| |      
T  28877260 agcataggaggtaggtctaaaattgtcatttatatacgtttctggagttaaaaatagaaggtaggactaaaacagcaaaaaacatgat-agttagggaca 28877358  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||||||| |||||||||| | | ||| |||||  |||| ||||||||||| || ||||||||    
T  28877359 attttgttcaatttgaaagaggtataaccattttcgtgagttggtcaaaatgcgaggaccaaaa 28877422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 171
Target Start/End: Original strand, 35427182 - 35427345
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaacatgataatttaggtatg 107  Q
    |||||||| ||| || ||||||||||||||||| || |||| |||||||| ||||| |||| | ||| ||||||||||||||    |||||||||| | |    
T  35427182 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagatgggactaaaactgcaaaaaatatataatttagggacg 35427281  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    |||||||||| ||| ||||| | ||||| |||||  |||| ||||||||||| || ||||||||    
T  35427282 attttgttcggtttaaaagaggtagaaccattttcgtgagttggtcaaaatgcgaggaccaaaa 35427345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 159
Target Start/End: Original strand, 7910986 - 7911137
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggaataaaactgcaaaaacatgataatttaggtatg 107  Q
    |||||||| ||| || ||||||||||||||||| || |||| ||||||||||||||| | | || || ||||||||||||||    ||| |||||| | |    
T  7910986 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttgaaaatagagggatatgactaaaactgcaaaaaatatatagtttagggacg 7911085  T
Q  108 attttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    |||||||||||||| ||||| | ||||| |||||  |||| |||||||||||    
T  7911086 attttgttcgatttaaaagaggtagaaccattttcgtgagttggtcaaaatg 7911137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 28254796 - 28254915
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaacatgataatttaggtatg 107  Q
    |||||||| ||| || ||||||||||||||||| || ||||||||||||| ||||| |||| ||||| ||||||||||||||    ||| |||||| | |    
T  28254796 agcataggtggttggactaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaattatatagtttagggacg 28254895  T
Q  108 attttgttcgatttgaaaga 127  Q
    |||||||||||||| |||||    
T  28254896 attttgttcgatttaaaaga 28254915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 599692 - 599589
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa-catgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||| | || ||||||||||||| ||||||| || || || |||||||||||||| ||| |||||||||| |||||||||||||||||     
T  599692 ctaaaactgtcatttgtgtgcgtttctggagttggaaatagggagatatgactaaaactgcaaaaaacat-ataatttagggatgattttgttcgattta 599594  T
Q  123 aaaga 127  Q
    |||||    
T  599593 aaaga 599589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 9796902 - 9796751
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||||| || |||| |||||||| ||||| |||| || || ||||||||| |||||||| ||| |||| | ||    
T  9796902 agcataggtggttggactaaaactgtcatttctgtgcgtttatggagttggaaatagggagatatgactaaaactgcaaaaaacat-atagtttatggat 9796804  T
Q  107 gattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
    ||||||||||||||| ||||| | || || | |||| |||| |||||||||||    
T  9796803 gattttgttcgatttaaaagaggtaggaccaattttgtgagttggtcaaaatg 9796751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 41260647 - 41260750
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||| | || ||||||||||||||||||| |||| ||||| ||||||||| |||||||| ||| |||||| | |||||||||||||||     
T  41260647 ctaaaactgtcatttatgtgcgtttctggagttgaaaatagggagataggactaaaactgcaaaaaacat-atagtttagggacgattttgttcgattta 41260745  T
Q  123 aaaga 127  Q
    |||||    
T  41260746 aaaga 41260750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 44831614 - 44831705
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  44831614 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataatt 44831705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 18049961 - 18050080
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| ||  ||||||||| |||||| || ||||||||||||||||||| |||| ||||| |||||| || |||||||| ||| |||||| |     
T  18049961 agcataggtggttggagtaaaactgttatttctgtgcgtttctggagttgaaaatagggagataggattaaaacagcaaaaaacat-atagtttagggac 18050059  T
Q  107 gattttgttcgatttgaaaga 127  Q
    ||||||||||||||| |||||    
T  18050060 gattttgttcgatttaaaaga 18050080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 5731182 - 5731295
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgc-aaaaacatgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||| | || ||||||||||||||||||| |||| ||| | ||||||||| |||||||| ||| |||| | |     
T  5731182 agcataggtggttggactaaaactgtcatttatgtgcgtttctggagttgaaaatagggagatagaactaaaactgcaaaaaacat-atagtttatggac 5731280  T
Q  107 gattttgttcgattt 121  Q
    |||||||||||||||    
T  5731281 gattttgttcgattt 5731295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 12572040 - 12571994
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  12572040 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 12571994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 13224816 - 13224770
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  13224816 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 13224770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 16578466 - 16578583
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa-catgataatttaggtat 106  Q
    |||||||| ||| || ||||||||||||||||| || |||||| | |||| ||||||| || ||||| |||||||||||||| ||| ||| ||||   ||    
T  16578466 agcataggtggttggactaaaactgtcatttctgtgcgtttctagtgttggaaatagggagataggactaaaactgcaaaaaacat-atagtttaatgat 16578564  T
Q  107 gattttgttcgatttgaaa 125  Q
    |||||||||||||||||||    
T  16578565 gattttgttcgatttgaaa 16578583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 159
Target Start/End: Complemental strand, 18049767 - 18049615
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa--catgataatttaggta 105  Q
    |||||||| ||| ||  |||||||||||||||| || ||||||||||||| ||||||| || ||||| ||||||||||||||  ||| ||| |||| | |    
T  18049767 agcataggtggttggattaaaactgtcatttctgtgcgtttctggagttggaaatagggagataggactaaaactgcaaaaaaacat-atagtttaagga 18049669  T
Q  106 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatg 159  Q
     ||||||||||||||| ||| |   ||||| |||||  |||| |||||||||||    
T  18049668 cgattttgttcgatttaaaaaagatagaaccattttcgtgagttggtcaaaatg 18049615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 26252982 - 26252866
Alignment:
Q  12 atagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgca-aaaacatgataatttaggtatgat 109  Q
    ||||| ||| || ||||| |||||||||||  | ||||||||||||| ||||| |||| ||||| |||||||||| ||||||| ||| |||||| | |||    
T  26252982 ataggtggttggactaaatctgtcatttctgagcgtttctggagttggaaatagggagataggactaaaactgcacaaaacat-atagtttagggacgat 26252884  T
Q  110 tttgttcgatttgaaaga 127  Q
    |||||||||||| |||||    
T  26252883 tttgttcgatttaaaaga 26252866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 28254602 - 28254521
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || |||||| |||||||||| || ||||||||||||| ||||| |||| ||||| ||||||||||||||    
T  28254602 agcataggtggttggactaaaaatgtcatttctatgcgtttctggagttggaaatagggagataggactaaaactgcaaaaa 28254521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 13225023 - 13225099
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||| |||||||||| |||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  13225023 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 13225099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 171
Target Start/End: Complemental strand, 42035932 - 42035785
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaa-acatgataatttaggtatgattttgttcgatttg 122  Q
    ||||||||||||||| | || |||| |||||||  ||||||| || ||||| ||||| ||||||| | || ||| |||| | | |||||||||||||||     
T  42035932 ctaaaactgtcatttttgtgcgtttatggagttagaaatagggagataggactaaaattgcaaaatatat-atagtttatggacgattttgttcgattta 42035834  T
Q  123 aaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    ||||| | ||||| |||||  |||| |||||||||||||| ||||||||    
T  42035833 aaagaggtagaaccattttcgtgagttggtcaaaatgtgaggaccaaaa 42035785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 4630161 - 4630207
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    ||||||||||||||||||||||||||||||| |||| |||| |||||    
T  4630161 agcatagggggtaggtctaaaactgtcatttttctgcgtttttggag 4630207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 6115496 - 6115600
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaat-aggaggtaggaataaaactgc--aaaaacatgataatttaggtatgattttgttcgattt 121  Q
    ||||||||||||||||| || |||||| ||||||||||| ||||| ||| | ||||||| |  |||||||| ||| |||||| | |||||||||||||||    
T  6115496 ctaaaactgtcatttctgtgcgtttcttgagttgaaaataaggagatagaactaaaactacaaaaaaacat-atagtttagggacgattttgttcgattt 6115594  T
Q  122 gaaaga 127  Q
     |||||    
T  6115595 aaaaga 6115600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 33328334 - 33328288
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    ||||||||||||||||||||||||||||||||| || |||| |||||    
T  33328334 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggag 33328288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 33743082 - 33743032
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagt-tgaaaataggaggtagga 74  Q
    |||||||||||||||||||| |||||||| || ||||||||||||||||||    
T  33743082 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtagga 33743032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 34799256 - 34799092
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa--catgataatttaggta 105  Q
    |||||||| ||| || |||||| |||||||| | || |||| |||||||| ||||||| || ||||| ||||||||||||||  ||| ||| |||| | |    
T  34799256 agcataggtggttggactaaaattgtcatttatgtgcgtttatggagttggaaatagggagataggactaaaactgcaaaaaaacat-atagtttaagga 34799158  T
Q  106 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
     || |||||||||||| ||| ||  || || ||||| ||||| |||||||||||  ||||||||||    
T  34799157 cgactttgttcgatttaaaaaaaataggaccattttcatgagttggtcaaaatggtatgaccaaaa 34799092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 5730977 - 5730912
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    ||||||||||||||||| |  |||||||||||| |||||| |||||||||| |||||| |||||||    
T  5730977 ctaaaactgtcatttctgtacgtttctggagttaaaaatagggaggtaggactaaaacagcaaaaa 5730912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 18428147 - 18428212
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    ||||||||||||||| | || ||||||||||||| ||||| |||| ||||| ||||||||||||||    
T  18428147 ctaaaactgtcatttttgtgcgtttctggagttggaaatagggagataggagtaaaactgcaaaaa 18428212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 9929070 - 9928994
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||| |||||||||| |||||||||| ||||||| |||||||||||  |||| ||||| ||| |||||||||    
T  9929070 ctaaaactgacatttctctgcgtttctggagtttgaaaaaaggaggtaggacgaaaaatgcaacaaaaatgataatt 9928994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 11656841 - 11656917
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||  ||||||||| |||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  11656841 ctaaaactgctatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 11656917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 12572235 - 12572311
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||  ||||||||| |||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  12572235 ctaaaactgcaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 12572311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 19176451 - 19176375
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||| |||  |||| ||||| ||| |||||||||    
T  19176451 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtcggacgaaaaatgcaacaaaaatgataatt 19176375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 7910714 - 7910628
Alignment:
Q  85 aaaaacatgataatttaggtatgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaaa 172  Q
    |||||||| |||||||||| | ||||||||||||||| ||||| | | ||| |||||  |||| || ||||||||||| |||||||||    
T  7910714 aaaaacat-ataatttagggacgattttgttcgatttaaaagaggtataaccattttcgtgagttgatcaaaatgtgaggaccaaaaa 7910628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 9930026 - 9930061
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctg 44  Q
    |||||||||||||||||||||||| |||||||||||    
T  9930026 agcatagggggtaggtctaaaactatcatttctctg 9930061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 16578247 - 16578165
Alignment:
Q  46 gtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa-catgataatttaggtatgattttgttcgatttgaaaga 127  Q
    ||||||||||||| ||||||| || |||||  ||||||||||||| ||| |||||||||| | ||||||||||||||| |||||    
T  16578247 gtttctggagttggaaatagggagataggaccaaaactgcaaaaaacat-ataatttagggacgattttgttcgatttaaaaga 16578165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 19176659 - 19176750
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||| |||||||||||||||||||||| |||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  19176659 agcataggtggtaggtctaaaactgtcatttgtctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 19176750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 44831408 - 44831333
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataat 98  Q
    |||||||| ||||||||||| |||| ||||| |||||||||||||||||||  |||| ||||| ||| ||||||||    
T  44831408 ctaaaactatcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataat 44831333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 10047068 - 10047126
Alignment:
Q  70 taggaataaaactgcaaaaacatgataatttaggtatgattttgttcgatttgaaagaa 128  Q
    ||||| ||||||||||||||||||||| |||||  |  |||||||||||||| ||||||    
T  10047068 taggattaaaactgcaaaaacatgatagtttagagaccattttgttcgatttaaaagaa 10047126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 599884 - 599949
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggaataaaactgcaaaaa 89  Q
    ||||||||||||||||| || ||||||||| ||| |||||| ||| || || ||||||||||||||    
T  599884 ctaaaactgtcatttctatgcgtttctggaattggaaatagagagataagactaaaactgcaaaaa 599949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 9797112 - 9797177
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa 89  Q
    ||||||||||||||||| || |||| |||||||| ||||||| || ||| | ||||||||||||||    
T  9797112 ctaaaactgtcatttctgtgcgtttatggagttggaaataggtagatagaactaaaactgcaaaaa 9797177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 33743290 - 33743379
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||| |||||||||||||||| ||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  33743290 catagggagtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 33743379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 35163874 - 35163817
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg 66  Q
    |||||||| ||| || ||||||||||||||||| || |||||| |||||| |||||||    
T  35163874 agcataggtggttggactaaaactgtcatttctgtgcgtttctcgagttggaaatagg 35163817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 35426973 - 35426908
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    ||||||||||||||||| || |||| |||||||| ||||| |||| ||||| ||||| ||||||||    
T  35426973 ctaaaactgtcatttctgtgcgtttatggagttggaaatagggagataggagtaaaattgcaaaaa 35426908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 35694030 - 35693965
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaata-ggaggtaggaataaaactgcaaaaa 89  Q
    ||||||||||||||| | || ||||||||||||| ||||| |||| ||||| |||||||| |||||    
T  35694030 ctaaaactgtcatttatgtgcgtttctggagttggaaatagggagataggactaaaactgaaaaaa 35693965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 9178005 - 9178045
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgttt 49  Q
    |||||||| ||||||||||||| ||||||||||||| ||||    
T  9178005 agcataggaggtaggtctaaaattgtcatttctctgcgttt 9178045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 33328524 - 33328600
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||| |||||||||| |||||||||| |||||||| |||||| |||  |||| ||||| ||| |||||||||    
T  33328524 ctaaaactgccatttctctgcgtttctggagtttgaaaatgggaggtgggacgaaaaatgcaacaaaaatgataatt 33328600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 34799469 - 34799572
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaataggagg-taggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttg 122  Q
    |||||||| |||||| | || |||| |||||||| |||||||| | ||||| ||||||||| |||||||| ||| |||||| |  ||||||||||||||     
T  34799469 ctaaaactatcatttatgtgcgtttatggagttggaaataggaagataggactaaaactgcaaaaaacat-atagtttagggacaattttgttcgattta 34799567  T
Q  123 aaaga 127  Q
    |||||    
T  34799568 aaaga 34799572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 41681518 - 41681594
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||  |||||||||| |||||||||| |||||||||| ||||||||  |||| ||||| ||| |||||||||    
T  41681518 ctaaaactaccatttctctgcgtttctggagtttgaaaatagcaggtaggacgaaaaatgcaacaaaaatgataatt 41681594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 6777 - 6885
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-----aggtaggaataaaactgc--aaaaacatgataatttaggtatgattttgttcg 117  Q
    ||||||||||||||||| || |||||||||||||||||||||     |||||||| |||||||||  ||||||||| || |||||||| |||||||||||    
T  6777 ctaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggtaggactaaaactgcaaaaaaacatg-tagtttaggtacgattttgttcg 6875  T
Q  118 atttgaaaga 127  Q
    |||| |||||    
T  6876 atttaaaaga 6885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 6551 - 6455
Alignment:
Q  26 taaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgattt 121  Q
    |||||||||||||||| || ||||||| ||||| ||||||| || ||||| ||||||||| |||||||| |||||||| | | |||||||||||||||    
T  6551 taaaactgtcatttctgtgcgtttctgaagttggaaataggaagataggactaaaactgcaaaaaacat-ataatttaaggacgattttgttcgattt 6455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 6795 - 6903
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagttgaaaatagg-----aggtaggaataaaactgc--aaaaacatgataatttaggtatgattttgttcg 117  Q
    ||||||||||||||||| || |||||||||||||||||||||     |||||||| |||||||||  ||||||||| || |||||||| |||||||||||    
T  6795 ctaaaactgtcatttctgtgcgtttctggagttgaaaatagggagataggtaggactaaaactgcaaaaaaacatg-tagtttaggtacgattttgttcg 6893  T
Q  118 atttgaaaga 127  Q
    |||| |||||    
T  6894 atttaaaaga 6903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 6569 - 6473
Alignment:
Q  26 taaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgattt 121  Q
    |||||||||||||||| || ||||||| ||||| ||||||| || ||||| ||||||||| |||||||| |||||||| | | |||||||||||||||    
T  6569 taaaactgtcatttctgtgcgtttctgaagttggaaataggaagataggactaaaactgcaaaaaacat-ataatttaaggacgattttgttcgattt 6473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 99
Target Start/End: Original strand, 4576 - 4667
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  4576 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 4667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 42339 - 42254
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    ||||||||||||||||||||||||||||| ||||||| || |||||||||||||||| ||  |||| ||||| ||| |||||||||    
T  42339 ggggtaggtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtatgacaaaaaatgcaacaaaaatgataatt 42254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 42528 - 42574
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  42528 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 42574  T

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Target: scaffold0157 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 16672 - 16626
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  16672 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 16626  T

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Target: scaffold0157; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 16880 - 16956
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  16880 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 16956  T

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Target: scaffold0097 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 46443 - 46279
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatagg-aggtaggaataaaactgcaaaaa--catgataatttaggta 105  Q
    |||||||| ||| || ||||||||||||||| | ||  ||| |||| ||| ||||||| || || || ||||||||||||||  ||| ||| |||||| |    
T  46443 agcataggtggttggactaaaactgtcatttttgtgcatttatggaattggaaatagggagatatgactaaaactgcaaaaaaacat-atagtttaggga 46345  T
Q  106 tgattttgttcgatttgaaagaagcagaacaatttttatgagctggtcaaaatgtgatgaccaaaa 171  Q
    |||||||||||||||| ||||| | ||||| |||||  | || ||||||||||| || ||||||||    
T  46344 tgattttgttcgatttaaaagaggtagaaccattttcgtaagttggtcaaaatgcgaggaccaaaa 46279  T

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Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 134042 - 134088
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggag 55  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  134042 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggag 134088  T

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Target: scaffold0951 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 1841 - 1752
Alignment:
Q  11 catagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  1841 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 1752  T

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Target: scaffold0951; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 2051 - 2127
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||| ||||||||||| |||||||||| |||||||||||||||||||  |||| ||||| ||| |||||||||    
T  2051 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 2127  T

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Target: scaffold0295 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 4969 - 4878
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||||||||||||||||||| ||||||||| |||| |||||   ||||| || |||||||  |||| ||||| ||| |||||||||    
T  4969 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataatt 4878  T

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Target: scaffold0295; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 5179 - 5224
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggag-ttgaaaataggagg 69  Q
    ||||||||||||||| |||| |||||||||| ||||||||||||||    
T  5179 ctaaaactgtcatttttctgcgtttctggagtttgaaaataggagg 5224  T

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Target: scaffold0021 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 127
Target Start/End: Original strand, 159288 - 159370
Alignment:
Q  46 gtttctggagttgaaaataggaggtaggaataaaactgc-aaaaacatgataatttaggtatgattttgttcgatttgaaaga 127  Q
    |||| ||||| |||||||||| |||| || ||||||||| ||||| |||||| |||| | | |||||||||||||||||||||    
T  159288 gtttttggaggtgaaaatagggggtatgactaaaactgcaaaaaatatgatagtttatgaacgattttgttcgatttgaaaga 159370  T

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Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 78493 - 78412
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaatag-gaggtaggaataaaactgcaaaaa 89  Q
    |||||||| ||| || |||||| |||||||||| ||  |||||||||||| |||||| ||| ||||| ||||||||||||||    
T  78493 agcataggtggttggactaaaattgtcatttctatgcatttctggagttggaaatagagagataggactaaaactgcaaaaa 78412  T

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Target: scaffold1223 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 1116 - 1175
Alignment:
Q  16 ggggtaggtctaaaactgtcatttctctgtgtttctggag-ttgaaaataggaggtagga 74  Q
    ||||| |||||||||||| ||||| |||| |||||||| | |||||||||||||||||||    
T  1116 ggggtgggtctaaaactgccatttttctgcgtttctggggtttgaaaataggaggtagga 1175  T

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Target: scaffold1223; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 928 - 838
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctgtgtttctggagttgaaaataggaggtaggaataaaactgcaaaaacatgataatt 99  Q
    |||||| |||||| |||||||||||| ||||||||| |||| |||||   ||||| || |||||||  |||| ||||| || |||||||||    
T  928 agcataaggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaatgataatt 838  T

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Target: scaffold0432 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 10242 - 10277
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctg 44  Q
    |||||||||||||||| |||||||||||||||||||    
T  10242 agcatagggggtaggtttaaaactgtcatttctctg 10277  T

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Target: scaffold0417 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 10797 - 10762
Alignment:
Q  9 agcatagggggtaggtctaaaactgtcatttctctg 44  Q
    ||||||||||||| ||||||||||||||||||||||    
T  10797 agcatagggggtacgtctaaaactgtcatttctctg 10762  T

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Target: scaffold0417; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 11007 - 11083
Alignment:
Q  25 ctaaaactgtcatttctctgtgtttctggagtt-gaaaataggaggtaggaataaaactgcaa-aaacatgataatt 99  Q
    |||||||||  ||||||||| |||||| ||||| |||||||||||||||||  |||| ||||| ||| |||||||||    
T  11007 ctaaaactgcaatttctctgcgtttctcgagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatt 11083  T

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