View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12584_low_6 (Length: 245)
Name: NF12584_low_6
Description: NF12584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12584_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 6 - 227
Target Start/End: Complemental strand, 11327078 - 11326855
Alignment:
| Q |
6 |
tcagagttacaaacaaagtttaattggtattgtaaactgaatcgtaat-gtnnnnnnnnnnnnaa-ttgtttgtaacactgaaaccatattatctaatta |
103 |
Q |
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| T |
11327078 |
tcagagttacaaacaaagtttagttggtattgtaaactgaatggtaatagtatatatatatataaattgtatgtaacactgaaaccatattatctaatta |
11326979 |
T |
|
| Q |
104 |
acaaataaaaatacctgtgttcgttccccctnnnnnnnnnnnnnnnnngtacctgtcttccatccatgaaatgctgtagagatctcccaaacaaatatca |
203 |
Q |
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|||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11326978 |
acaattaaaaatacctgtgttcgttccccctaaaaaacaataaaaaaagtacctgtcttccatccatgaaatgctgtagagatctcccaaacaaatatca |
11326879 |
T |
|
| Q |
204 |
tactcaggtggtggaggaacatat |
227 |
Q |
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||||||||||||||||||| |||| |
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| T |
11326878 |
tactcaggtggtggaggaagatat |
11326855 |
T |
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