View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12585_high_2 (Length: 458)

Name: NF12585_high_2
Description: NF12585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12585_high_2
NF12585_high_2
[»] chr4 (42 HSPs)
chr4 (1-441)||(45764032-45764472)
chr4 (347-428)||(26718380-26718461)
chr4 (347-428)||(26731008-26731089)
chr4 (353-428)||(2109443-2109519)
chr4 (350-429)||(12387646-12387726)
chr4 (350-405)||(32696770-32696825)
chr4 (374-429)||(36413332-36413387)
chr4 (395-430)||(40258203-40258238)
chr4 (350-428)||(42490920-42490999)
chr4 (350-428)||(28657422-28657500)
chr4 (350-428)||(31657658-31657736)
chr4 (391-428)||(20632682-20632719)
chr4 (374-427)||(28676158-28676211)
chr4 (391-428)||(36444429-36444466)
chr4 (391-427)||(23718694-23718730)
chr4 (388-428)||(28480558-28480598)
chr4 (388-428)||(28481432-28481472)
chr4 (388-428)||(28482307-28482347)
chr4 (355-427)||(52846213-52846285)
chr4 (347-405)||(1795959-1796018)
chr4 (391-430)||(3475867-3475906)
chr4 (350-429)||(17683235-17683314)
chr4 (350-429)||(17683358-17683437)
chr4 (365-427)||(32464611-32464674)
chr4 (350-405)||(37514113-37514168)
chr4 (350-405)||(42815439-42815494)
chr4 (374-428)||(4511825-4511879)
chr4 (350-427)||(5386385-5386463)
chr4 (391-429)||(18568849-18568887)
chr4 (374-428)||(30973597-30973651)
chr4 (388-430)||(32365687-32365729)
chr4 (350-428)||(43769723-43769801)
chr4 (352-405)||(50721727-50721781)
chr4 (347-428)||(50980602-50980684)
chr4 (391-428)||(11012141-11012178)
chr4 (391-428)||(24088598-24088635)
chr4 (391-428)||(39449173-39449210)
chr4 (388-428)||(1840595-1840635)
chr4 (350-405)||(7632442-7632498)
chr4 (374-430)||(15515793-15515849)
chr4 (388-428)||(27384187-27384227)
chr4 (395-431)||(35332703-35332739)
[»] chr2 (27 HSPs)
chr2 (347-428)||(40700207-40700289)
chr2 (377-428)||(9834090-9834141)
chr2 (350-405)||(29361055-29361110)
chr2 (347-425)||(36212038-36212115)
chr2 (350-428)||(40937045-40937123)
chr2 (350-405)||(1352423-1352479)
chr2 (350-428)||(25086335-25086411)
chr2 (395-431)||(36816454-36816490)
chr2 (388-431)||(12191955-12191998)
chr2 (347-405)||(29449246-29449305)
chr2 (350-396)||(2842862-2842908)
chr2 (355-428)||(4263850-4263923)
chr2 (347-420)||(10472125-10472199)
chr2 (391-429)||(35334519-35334557)
chr2 (350-428)||(42678761-42678839)
chr2 (391-428)||(3299139-3299176)
chr2 (347-396)||(5031967-5032016)
chr2 (364-428)||(8482227-8482292)
chr2 (389-426)||(17264096-17264133)
chr2 (391-428)||(18508078-18508115)
chr2 (391-428)||(39247497-39247534)
chr2 (395-424)||(41840619-41840648)
chr2 (395-431)||(12784437-12784473)
chr2 (402-430)||(15678171-15678199)
chr2 (391-427)||(26321731-26321767)
chr2 (391-427)||(26321899-26321935)
chr2 (388-428)||(29795447-29795487)
[»] chr3 (26 HSPs)
chr3 (355-431)||(30580130-30580207)
chr3 (347-428)||(37035503-37035585)
chr3 (374-428)||(46952949-46953003)
chr3 (350-428)||(49761319-49761397)
chr3 (347-428)||(54195351-54195433)
chr3 (374-431)||(23868984-23869041)
chr3 (388-428)||(52431220-52431260)
chr3 (391-430)||(19418191-19418230)
chr3 (350-425)||(24645371-24645446)
chr3 (350-428)||(28700472-28700551)
chr3 (350-405)||(29573337-29573392)
chr3 (347-405)||(45186529-45186588)
chr3 (350-428)||(55361214-55361293)
chr3 (350-396)||(31376746-31376792)
chr3 (350-428)||(46094423-46094501)
chr3 (374-428)||(47683801-47683855)
chr3 (374-428)||(48117347-48117401)
chr3 (391-428)||(36907048-36907085)
chr3 (391-428)||(43499595-43499632)
chr3 (352-405)||(45754673-45754726)
chr3 (391-428)||(50652388-50652425)
chr3 (391-431)||(1402647-1402687)
chr3 (398-430)||(12094430-12094462)
chr3 (391-431)||(34057987-34058027)
chr3 (395-431)||(51230646-51230682)
chr3 (392-428)||(55344331-55344367)
[»] chr1 (38 HSPs)
chr1 (365-431)||(40139123-40139190)
chr1 (349-430)||(41507174-41507256)
chr1 (350-428)||(50781551-50781629)
chr1 (350-427)||(19969543-19969620)
chr1 (350-428)||(48220125-48220203)
chr1 (391-428)||(29706737-29706774)
chr1 (350-430)||(18336156-18336236)
chr1 (388-428)||(34974780-34974820)
chr1 (388-428)||(43612100-43612140)
chr1 (395-431)||(49699790-49699826)
chr1 (347-425)||(17652643-17652722)
chr1 (394-429)||(31847222-31847257)
chr1 (347-429)||(32319287-32319369)
chr1 (354-428)||(33358143-33358218)
chr1 (350-405)||(46281471-46281526)
chr1 (388-431)||(48872048-48872091)
chr1 (350-428)||(8200087-8200165)
chr1 (350-396)||(37588656-37588702)
chr1 (391-425)||(39380853-39380887)
chr1 (374-428)||(40596060-40596114)
chr1 (350-428)||(44632540-44632618)
chr1 (350-427)||(51080071-51080148)
chr1 (391-428)||(366657-366694)
chr1 (391-428)||(11947795-11947832)
chr1 (391-428)||(27352630-27352667)
chr1 (391-428)||(29489393-29489430)
chr1 (391-428)||(30530608-30530645)
chr1 (391-428)||(31184281-31184318)
chr1 (391-428)||(32873341-32873378)
chr1 (395-428)||(43755716-43755749)
chr1 (350-405)||(9987986-9988042)
chr1 (350-429)||(11597647-11597727)
chr1 (374-430)||(16252765-16252821)
chr1 (365-428)||(21446214-21446278)
chr1 (391-427)||(26839383-26839419)
chr1 (365-428)||(27687515-27687579)
chr1 (350-406)||(51466802-51466857)
chr1 (390-430)||(52261337-52261377)
[»] chr5 (21 HSPs)
chr5 (350-428)||(9226313-9226390)
chr5 (355-425)||(41865605-41865676)
chr5 (391-428)||(7144577-7144614)
chr5 (376-429)||(38036711-38036764)
chr5 (388-428)||(12878756-12878796)
chr5 (350-405)||(6940131-6940186)
chr5 (350-405)||(18695353-18695408)
chr5 (374-429)||(30334772-30334827)
chr5 (398-429)||(30776635-30776666)
chr5 (363-428)||(6865781-6865847)
chr5 (374-428)||(13734366-13734420)
chr5 (374-428)||(14206400-14206454)
chr5 (391-425)||(32360521-32360555)
chr5 (350-404)||(34888790-34888843)
chr5 (390-424)||(38890418-38890452)
chr5 (389-430)||(16143388-16143429)
chr5 (391-428)||(35814453-35814490)
chr5 (365-428)||(372716-372780)
chr5 (350-405)||(7287170-7287226)
chr5 (390-430)||(13461762-13461802)
chr5 (350-405)||(38493659-38493715)
[»] chr7 (27 HSPs)
chr7 (350-427)||(7817650-7817726)
chr7 (347-405)||(48145559-48145618)
chr7 (374-428)||(26041321-26041375)
chr7 (350-428)||(47078232-47078310)
chr7 (391-428)||(5068657-5068694)
chr7 (391-428)||(47530325-47530362)
chr7 (350-405)||(1471272-1471327)
chr7 (347-405)||(17002371-17002430)
chr7 (350-405)||(46829514-46829569)
chr7 (374-428)||(2323304-2323358)
chr7 (382-428)||(28862095-28862141)
chr7 (391-429)||(29763829-29763867)
chr7 (374-428)||(31785477-31785531)
chr7 (382-428)||(34992349-34992395)
chr7 (363-428)||(43444635-43444701)
chr7 (350-427)||(3062343-3062420)
chr7 (391-428)||(16567316-16567353)
chr7 (391-428)||(16598309-16598346)
chr7 (391-428)||(22692084-22692121)
chr7 (391-428)||(44894507-44894544)
chr7 (391-431)||(17500694-17500734)
chr7 (391-431)||(17552480-17552520)
chr7 (350-425)||(23680019-23680095)
chr7 (391-431)||(26153643-26153683)
chr7 (391-427)||(30818031-30818067)
chr7 (350-405)||(42584837-42584893)
chr7 (391-427)||(43171207-43171243)
[»] chr8 (27 HSPs)
chr8 (350-428)||(30439487-30439565)
chr8 (354-427)||(32020450-32020524)
chr8 (350-425)||(26000552-26000628)
chr8 (350-428)||(5740766-5740845)
chr8 (391-430)||(14531619-14531658)
chr8 (374-428)||(37392134-37392188)
chr8 (347-405)||(38234042-38234100)
chr8 (350-427)||(39211054-39211132)
chr8 (389-431)||(40517266-40517308)
chr8 (357-425)||(157070-157139)
chr8 (391-428)||(2768147-2768184)
chr8 (391-428)||(6105014-6105051)
chr8 (391-428)||(6849295-6849332)
chr8 (391-428)||(7375813-7375850)
chr8 (391-428)||(12655922-12655959)
chr8 (395-428)||(20852919-20852952)
chr8 (382-431)||(30112825-30112874)
chr8 (391-428)||(33605112-33605149)
chr8 (391-428)||(37873139-37873176)
chr8 (391-428)||(39021477-39021514)
chr8 (391-428)||(42012624-42012661)
chr8 (347-398)||(8671533-8671585)
chr8 (391-427)||(10553833-10553869)
chr8 (388-428)||(16487610-16487650)
chr8 (391-431)||(28623145-28623185)
chr8 (391-431)||(31731457-31731497)
chr8 (391-431)||(38844824-38844864)
[»] chr6 (13 HSPs)
chr6 (350-427)||(16352141-16352219)
chr6 (374-431)||(33527432-33527489)
chr6 (353-425)||(14693236-14693308)
chr6 (391-427)||(32621802-32621838)
chr6 (363-430)||(32644621-32644689)
chr6 (350-428)||(5028247-5028325)
chr6 (391-425)||(29172993-29173027)
chr6 (398-431)||(21857608-21857641)
chr6 (391-428)||(31204844-31204881)
chr6 (391-428)||(31417330-31417367)
chr6 (388-428)||(1897697-1897737)
chr6 (396-428)||(28670526-28670558)
chr6 (388-428)||(30945823-30945863)
[»] scaffold0154 (1 HSPs)
scaffold0154 (391-428)||(4315-4352)
[»] scaffold0160 (1 HSPs)
scaffold0160 (391-431)||(26418-26458)
[»] scaffold0194 (1 HSPs)
scaffold0194 (374-433)||(29778-29837)
[»] scaffold0252 (1 HSPs)
scaffold0252 (391-425)||(8009-8043)
[»] scaffold0178 (1 HSPs)
scaffold0178 (402-436)||(9768-9802)
[»] scaffold0054 (1 HSPs)
scaffold0054 (374-428)||(31606-31660)
[»] scaffold0257 (1 HSPs)
scaffold0257 (391-428)||(23981-24018)
[»] scaffold0002 (1 HSPs)
scaffold0002 (391-431)||(6424-6464)


Alignment Details
Target: chr4 (Bit Score: 397; Significance: 0; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 1 - 441
Target Start/End: Original strand, 45764032 - 45764472
Alignment:
Q  1 agagaaaagagttttcattgggtgttgtgatcttctcactgacaaatatccccccaaatgtactctatcttcgttttttattattttaagattgttttta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45764032 agagaaaagagttttcattgggtgttgtgatcttctcactgacaaatatccccccaaatgtactctatcttcgttttttattattttaagattgttttta 45764131  T
Q  101 ctcaactacccctttaactagatcgtaaatactttctaccctagtgacttgtcaaatataccaaaatatccccccgtttcctcgtgtagattgagatttg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45764132 ctcaactacccctttaactagatcgtaaatactttctaccctagtgacttgtcaaatataccaaaatatccccccgtttcctcgtgtagattgagatttg 45764231  T
Q  201 agagttactgaggtttgtttgggaattgggaaattatacaggactttcttttagcataggagattatgatgtggttagttctccagtgagaataattgat 300  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  45764232 agagttactgaggtttgtttaggaattgggaaattatacaggactttcttttagcataggagattatgatgtggttagttctctagtgagaataatttat 45764331  T
Q  301 tttgataaaatccatgagattgcttatttgaataaacttttggatgagtaatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatca 400  Q
    ||||||| |||||||||||||  ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  45764332 tttgatataatccatgagattatttatttgaacaaacttttggatgagcaatagagagataaagtaaaaatatatgtgagcattaacgagaaagttgtca 45764431  T
Q  401 taaaatggttgtataaatatcatttctcatagttaattatg 441  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  45764432 taaaatagttgtataaatatcatttctcatagttaattatg 45764472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 428
Target Start/End: Complemental strand, 26718461 - 26718380
Alignment:
Q  347 agtaatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||||||||||||||||   ||||||| ||||  |||||| || ||||||||||| |||  ||||||||||||||    
T  26718461 agtaatagagagataaagtaaaaagtaatgtgagtatgagagagaaaattgtcataaaatggatgttcaaatatcatttctc 26718380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 428
Target Start/End: Complemental strand, 26731089 - 26731008
Alignment:
Q  347 agtaatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||||||||||||||||   ||||||| ||||  |||||| || ||||||||||| |||  ||||||||||||||    
T  26731089 agtaatagagagataaagtaaaaagtaatgtgagtatgagagagaaaattgtcataaaatggatgttcaaatatcatttctc 26731008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 428
Target Start/End: Complemental strand, 2109519 - 2109443
Alignment:
Q  353 agagagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||| |||||||||| ||| |||||| ||||| ||||||||| ||| || ||||||||| ||||||||||||||    
T  2109519 agagagagaaagtaaaaacataatgtgagtatgaaagagaaagttgtcaaaagatggttgtacaaatatcatttctc 2109443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 429
Target Start/End: Original strand, 12387646 - 12387726
Alignment:
Q  350 aatagagagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctca 429  Q
    |||| ||||| |||||||||||||| |||||  ||||| ||||||||| ||| |||||| ||||| |||||||||||||||    
T  12387646 aataaagagacaaagtaaaaatataatgtgattatgaaggagaaagttgtcaaaaaatgattgtacaaatatcatttctca 12387726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 405
Target Start/End: Original strand, 32696770 - 32696825
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaa 405  Q
    ||||||||||||||||||||||||||||||| ||||  |||||| |||||| ||||    
T  32696770 aatagagagataaagtaaaaatatatgtgagtatgagagagaaaattatcacaaaa 32696825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 374 - 429
Target Start/End: Original strand, 36413332 - 36413387
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctca 429  Q
    ||||||| ||||  |||||| |||||||||| ||||||||||||||||||||||||    
T  36413332 atgtgagtatgagagagaaaattatcataaagtggttgtataaatatcatttctca 36413387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 395 - 430
Target Start/End: Complemental strand, 40258238 - 40258203
Alignment:
Q  395 ttatcataaaatggttgtataaatatcatttctcat 430  Q
    ||||||||||||||||||||||||||||||||||||    
T  40258238 ttatcataaaatggttgtataaatatcatttctcat 40258203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 428
Target Start/End: Complemental strand, 42490999 - 42490920
Alignment:
Q  350 aatagagagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||| |||||||||| ||| |||||| ||||  ||||||||| ||| ||| |||||||| ||||||||||||||    
T  42490999 aatagagagagaaagtaaaaacataatgtgagtatgagagagaaagttgtcaaaaagtggttgtacaaatatcatttctc 42490920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 428
Target Start/End: Original strand, 28657422 - 28657500
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||||||||||   ||||||| ||||  ||||||||| ||| ||||||| |||  ||||||||||||||    
T  28657422 aatagagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 28657500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 428
Target Start/End: Complemental strand, 31657736 - 31657658
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||||||||||   ||||||| ||||  ||||||||| ||| ||||||| |||  ||||||||||||||    
T  31657736 aatagagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 31657658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 20632682 - 20632719
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||| |||||||||||||||||||||||||||    
T  20632682 aaagttatcaaaaaatggttgtataaatatcatttctc 20632719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 427
Target Start/End: Original strand, 28676158 - 28676211
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttct 427  Q
    ||||||| ||||| ||||||||| ||| |||||||||||| |||||||||||||    
T  28676158 atgtgagtatgaaagagaaagttgtcacaaaatggttgtacaaatatcatttct 28676211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 36444429 - 36444466
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  36444429 aaagttatcataaaatggttgtacaaatatcatttctc 36444466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 427
Target Start/End: Complemental strand, 23718730 - 23718694
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttct 427  Q
    |||||||||||||||||||||||||||||| ||||||    
T  23718730 aaagttatcataaaatggttgtataaatataatttct 23718694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 428
Target Start/End: Original strand, 28480558 - 28480598
Alignment:
Q  388 gagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  28480558 gagaaagttgtcataaagtggttgtataaatatcatttctc 28480598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 428
Target Start/End: Original strand, 28481432 - 28481472
Alignment:
Q  388 gagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  28481432 gagaaagttgtcataaagtggttgtataaatatcatttctc 28481472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 428
Target Start/End: Original strand, 28482307 - 28482347
Alignment:
Q  388 gagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  28482307 gagaaagttgtcataaagtggttgtataaatatcatttctc 28482347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 427
Target Start/End: Original strand, 52846213 - 52846285
Alignment:
Q  355 agagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttct 427  Q
    ||||||||||||||||   ||||||| ||||  ||||||||| ||||||||| | ||| ||||||||||||||    
T  52846213 agagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcataaaatagatgtttaaatatcatttct 52846285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 405
Target Start/End: Original strand, 1795959 - 1796018
Alignment:
Q  347 agtaatagagagataaagtaaaaatat-atgtgagcatgaacgagaaagttatcataaaa 405  Q
    ||||||||||||||||||||||||||| ||||||| ||||  || |||||||||| ||||    
T  1795959 agtaatagagagataaagtaaaaatataatgtgagtatgagagataaagttatcacaaaa 1796018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 430
Target Start/End: Complemental strand, 3475906 - 3475867
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctcat 430  Q
    |||||| |||||||||||||||| ||||||||||||||||    
T  3475906 aaagttgtcataaaatggttgtacaaatatcatttctcat 3475867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 429
Target Start/End: Complemental strand, 17683314 - 17683235
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctca 429  Q
    |||||||||||||||||||||   ||||||| || |  ||||||||| ||||||||||  |||  |||||||||||||||    
T  17683314 aatagagagataaagtaaaaagtaatgtgagtataagagagaaagttgtcataaaatgaatgttcaaatatcatttctca 17683235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 429
Target Start/End: Complemental strand, 17683437 - 17683358
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctca 429  Q
    |||||||||||||||||||||   || |||| ||||  || |||||| ||||||||||| |||  |||||||||||||||    
T  17683437 aatagagagataaagtaaaaagtaatatgagtatgagagataaagttgtcataaaatggatgttcaaatatcatttctca 17683358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 427
Target Start/End: Original strand, 32464611 - 32464674
Alignment:
Q  365 taaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttct 427  Q
    |||||||||| ||| || ||||| |||||| |||||||||||| |||||| |||||||||||||    
T  32464611 taaaaatataatgtaagtatgaaagagaaaattatcataaaatagttgtacaaatatcatttct 32464674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 405
Target Start/End: Original strand, 37514113 - 37514168
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaa 405  Q
    ||||||||||||||||||||| ||||||||| ||||  ||||||||| ||| ||||    
T  37514113 aatagagagataaagtaaaaacatatgtgagtatgagagagaaagttgtcacaaaa 37514168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 405
Target Start/End: Complemental strand, 42815494 - 42815439
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaa 405  Q
    ||||||||||||||||||||| ||||||||| ||||  ||||||||| ||| ||||    
T  42815494 aatagagagataaagtaaaaacatatgtgagtatgagagagaaagttgtcacaaaa 42815439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 428
Target Start/End: Complemental strand, 4511879 - 4511825
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||| ||||  ||||||||| ||||||||||||| || ||||||||||||||    
T  4511879 atgtgagtatgagagagaaagttgtcataaaatggttatacaaatatcatttctc 4511825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 427
Target Start/End: Complemental strand, 5386463 - 5386385
Alignment:
Q  350 aatagagagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttct 427  Q
    |||||||||| |||||||||  ||| |||||| ||||  ||||||||| ||| |||||||||||  |||||||||||||    
T  5386463 aatagagagagaaagtaaaagaataatgtgagtatgagagagaaagttgtcaaaaaatggttgttcaaatatcatttct 5386385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 429
Target Start/End: Original strand, 18568849 - 18568887
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctca 429  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  18568849 aaagttgtcacaaaatggttgtataaatatcatttctca 18568887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 428
Target Start/End: Complemental strand, 30973651 - 30973597
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||| ||||| || |||||| ||||||| |||||||| ||||||||||||||    
T  30973651 atgtgagtatgaaagaaaaagttgtcataaagtggttgtacaaatatcatttctc 30973597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 430
Target Start/End: Original strand, 32365687 - 32365729
Alignment:
Q  388 gagaaagttatcataaaatggttgtataaatatcatttctcat 430  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||    
T  32365687 gagaaagttgtcacaaaatggttgtacaaatatcatttctcat 32365729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 428
Target Start/End: Complemental strand, 43769801 - 43769723
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||| ||||||||||||||||   ||||||| ||||  ||||||||| ||| ||||||| |||  ||||||||||||||    
T  43769801 aataaagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 43769723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 405
Target Start/End: Original strand, 50721727 - 50721781
Alignment:
Q  352 tagagagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaa 405  Q
    |||||||| |||||||||||||| |||||| ||||| ||||||||||||| ||||    
T  50721727 tagagagagaaagtaaaaatataatgtgagtatgaaagagaaagttatcacaaaa 50721781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 428
Target Start/End: Complemental strand, 50980684 - 50980602
Alignment:
Q  347 agtaatagagagataaagtaaaaatat-atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||| ||||| ||||||||||||| ||||||| ||||  ||||| ||| | | |||||| ||||| ||||||||||||||    
T  50980684 agtaatatagagagaaagtaaaaatataatgtgagtatgagagagaaggttgttagaaaatgattgtacaaatatcatttctc 50980602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 11012178 - 11012141
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  11012178 aaagttgtcataaaatggttgtacaaatatcatttctc 11012141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 24088598 - 24088635
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  24088598 aaagttgtcataaaatggttgtacaaatatcatttctc 24088635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 39449210 - 39449173
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  39449210 aaagttatcacaaaatagttgtataaatatcatttctc 39449173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 428
Target Start/End: Complemental strand, 1840635 - 1840595
Alignment:
Q  388 gagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||||| |||||||||||  ||||||||||||||    
T  1840635 gagaaagttatcacaaaatggttgttcaaatatcatttctc 1840595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 405
Target Start/End: Original strand, 7632442 - 7632498
Alignment:
Q  350 aatagagagataaagtaaaaatat-atgtgagcatgaacgagaaagttatcataaaa 405  Q
    |||||||||| ||||||||||||| ||||||| ||||| |||||| |||||| ||||    
T  7632442 aatagagagagaaagtaaaaatataatgtgagtatgaaagagaaaattatcacaaaa 7632498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 430
Target Start/End: Complemental strand, 15515849 - 15515793
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctcat 430  Q
    ||||||| ||||  ||||||||| ||||||||| ||||||  |||||||||||||||    
T  15515849 atgtgagtatgagagagaaagttgtcataaaatagttgtaccaatatcatttctcat 15515793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 428
Target Start/End: Complemental strand, 27384227 - 27384187
Alignment:
Q  388 gagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||| | |||||||||||||| ||||||||||||||    
T  27384227 gagaaagttgtaataaaatggttgtacaaatatcatttctc 27384187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 395 - 431
Target Start/End: Complemental strand, 35332739 - 35332703
Alignment:
Q  395 ttatcataaaatggttgtataaatatcatttctcata 431  Q
    |||||||||| |||||||| |||||||||||||||||    
T  35332739 ttatcataaagtggttgtacaaatatcatttctcata 35332703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 347 - 428
Target Start/End: Complemental strand, 40700289 - 40700207
Alignment:
Q  347 agtaatagagagataaagtaaaaatat-atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||||||||||||||||||| ||||||| ||||  ||||||||| | ||||||| |||||| ||||| ||||||||    
T  40700289 agtaatagagagataaagtaaaaatataatgtgagtatgagagagaaagttgttataaaatagttgtacaaataccatttctc 40700207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 377 - 428
Target Start/End: Original strand, 9834090 - 9834141
Alignment:
Q  377 tgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||| ||||| |||| |||| |||||||||||||||||||||||||||||||    
T  9834090 tgagtatgaaagagatagttgtcataaaatggttgtataaatatcatttctc 9834141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 405
Target Start/End: Complemental strand, 29361110 - 29361055
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaa 405  Q
    |||||||||||||||||||||| |||||||| ||||| |||||| |||||| ||||    
T  29361110 aatagagagataaagtaaaaatttatgtgagtatgaaagagaaaattatcacaaaa 29361055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 425
Target Start/End: Original strand, 36212038 - 36212115
Alignment:
Q  347 agtaatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcattt 425  Q
    |||||||||||||||||||||||||| ||||||| ||||| || |||||| ||| ||||||| |||  | |||||||||    
T  36212038 agtaatagagagataaagtaaaaata-atgtgagtatgaaagataaagttgtcacaaaatggatgttcagatatcattt 36212115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 428
Target Start/End: Original strand, 40937045 - 40937123
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||||||||||   ||||||| ||||  ||||||||||||| ||||||| |||  |||| |||||||||    
T  40937045 aatagagagataaagtaaaaaataatgtgagtatgagagagaaagttatcacaaaatggatgttcaaatgtcatttctc 40937123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 405
Target Start/End: Complemental strand, 1352479 - 1352423
Alignment:
Q  350 aatagagagataaagtaaaaatat-atgtgagcatgaacgagaaagttatcataaaa 405  Q
    |||||||| ||||||||||||||| ||||||| ||||| ||||||||| ||||||||    
T  1352479 aatagagaaataaagtaaaaatataatgtgagtatgaaagagaaagttttcataaaa 1352423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 428
Target Start/End: Complemental strand, 25086411 - 25086335
Alignment:
Q  350 aatagagagataaagtaaaa-atatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||| ||||||||||||||| ||| ||||||| ||||  ||||||||| ||||||||| |||||| ||||||||||||||    
T  25086411 aataaagagataaagtaaaacata-atgtgagtatga--gagaaagttgtcataaaattgttgtacaaatatcatttctc 25086335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 431
Target Start/End: Original strand, 36816454 - 36816490
Alignment:
Q  395 ttatcataaaatggttgtataaatatcatttctcata 431  Q
    |||||||||||| ||||||||||||||||||||||||    
T  36816454 ttatcataaaatagttgtataaatatcatttctcata 36816490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 431
Target Start/End: Complemental strand, 12191998 - 12191955
Alignment:
Q  388 gagaaagttatcataaaatggttgtataaatatcatttctcata 431  Q
    ||||||||||||||| ||||||| || |||||||||||||||||    
T  12191998 gagaaagttatcatataatggttatacaaatatcatttctcata 12191955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 405
Target Start/End: Complemental strand, 29449305 - 29449246
Alignment:
Q  347 agtaatagagagataaagtaaaaatat-atgtgagcatgaacgagaaagttatcataaaa 405  Q
    ||||||||||||| ||||||||||||| ||||||| ||||  ||||||||| ||||||||    
T  29449305 agtaatagagagagaaagtaaaaatataatgtgagtatgagagagaaagttgtcataaaa 29449246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 2842862 - 2842908
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagtt 396  Q
    |||||||||||||| |||||||||||||||| ||||  |||||||||    
T  2842862 aatagagagataaaataaaaatatatgtgagtatgagagagaaagtt 2842908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 428
Target Start/End: Original strand, 4263850 - 4263923
Alignment:
Q  355 agagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||| ||||||| |||||| |||||| ||||| ||||||||| ||| |||||| ||||| ||||||||||||||    
T  4263850 agagagaaagtaagaatataatgtgagtatgaaagagaaagttgtcaaaaaatg-ttgtacaaatatcatttctc 4263923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 420
Target Start/End: Original strand, 10472125 - 10472199
Alignment:
Q  347 agtaatagagagataaagtaaaaatat-atgtgagcatgaacgagaaagttatcataaaatggttgtataaatat 420  Q
    ||||||||||||| ||||||||||||| ||||||| ||||  ||||||||| | | ||||||||| || ||||||    
T  10472125 agtaatagagagagaaagtaaaaatataatgtgagtatgagagagaaagttgttagaaaatggttatacaaatat 10472199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 429
Target Start/End: Complemental strand, 35334557 - 35334519
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctca 429  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  35334557 aaagttattataaaatggttgtacaaatatcatttctca 35334519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 428
Target Start/End: Complemental strand, 42678839 - 42678761
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||||||||||   ||||||| ||||  ||||||||| |||  |||||| |||  ||||||||||||||    
T  42678839 aatagagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcactaaatggatgttcaaatatcatttctc 42678761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 3299139 - 3299176
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  3299139 aaagttgtcataaaatggttgtacaaatatcatttctc 3299176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 396
Target Start/End: Complemental strand, 5032016 - 5031967
Alignment:
Q  347 agtaatagagagataaagtaaaaatatatgtgagcatgaacgagaaagtt 396  Q
    ||||||||||||||||||| |||| ||||||||| ||||  |||||||||    
T  5032016 agtaatagagagataaagtgaaaacatatgtgagtatgagagagaaagtt 5031967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 428
Target Start/End: Original strand, 8482227 - 8482292
Alignment:
Q  364 gtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||| |||||  ||||  ||||||||| ||||||| |||||||| ||||||||||||||    
T  8482227 gtaaaaatataatgtgaatatgagagagaaagttgtcataaagtggttgtacaaatatcatttctc 8482292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 426
Target Start/End: Original strand, 17264096 - 17264133
Alignment:
Q  389 agaaagttatcataaaatggttgtataaatatcatttc 426  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  17264096 agaaagttgtcataaaatggttatataaatatcatttc 17264133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 18508115 - 18508078
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  18508115 aaagttatcataaaatggatgtacaaatatcatttctc 18508078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 39247497 - 39247534
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  39247497 aaagttatcacaaaatggttgtacaaatatcatttctc 39247534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 424
Target Start/End: Original strand, 41840619 - 41840648
Alignment:
Q  395 ttatcataaaatggttgtataaatatcatt 424  Q
    ||||||||||||||||||||||||||||||    
T  41840619 ttatcataaaatggttgtataaatatcatt 41840648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 395 - 431
Target Start/End: Original strand, 12784437 - 12784473
Alignment:
Q  395 ttatcataaaatggttgtataaatatcatttctcata 431  Q
    |||| |||||||||||||| |||||||||||||||||    
T  12784437 ttattataaaatggttgtacaaatatcatttctcata 12784473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 402 - 430
Target Start/End: Complemental strand, 15678199 - 15678171
Alignment:
Q  402 aaaatggttgtataaatatcatttctcat 430  Q
    |||||||||||||||||||||||||||||    
T  15678199 aaaatggttgtataaatatcatttctcat 15678171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 427
Target Start/End: Original strand, 26321731 - 26321767
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttct 427  Q
    |||||||||| |||||||||||| |||||||||||||    
T  26321731 aaagttatcacaaaatggttgtacaaatatcatttct 26321767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 427
Target Start/End: Original strand, 26321899 - 26321935
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttct 427  Q
    |||||||||| |||||||||||| |||||||||||||    
T  26321899 aaagttatcacaaaatggttgtacaaatatcatttct 26321935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 428
Target Start/End: Complemental strand, 29795487 - 29795447
Alignment:
Q  388 gagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||| ||| |||||||||||| ||||||||||||||    
T  29795487 gagaaagttgtcacaaaatggttgtacaaatatcatttctc 29795447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 431
Target Start/End: Complemental strand, 30580207 - 30580130
Alignment:
Q  355 agagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctcata 431  Q
    ||||| |||||||||| ||| | |||| ||||| || |||||| ||||||||||||||||||||||||||||||||||    
T  30580207 agagaaaaagtaaaaacataatatgagtatgaaagataaagttgtcataaaatggttgtataaatatcatttctcata 30580130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 428
Target Start/End: Original strand, 37035503 - 37035585
Alignment:
Q  347 agtaatagagagataaagtaaaaatat-atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||||||||||||| || ||||||| |||||  | ||| || ||| |||||||||||  ||||||||||||||    
T  37035503 agtaatagagagataaagtaaaaaaataatgtgagtatgaaaaataaaattgtcacaaaatggttgtcaaaatatcatttctc 37035585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 428
Target Start/End: Complemental strand, 46953003 - 46952949
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||| ||||  ||||||||||||| |||||||||||| ||||||||||||||    
T  46953003 atgtgagtatgagagagaaagttatcaaaaaatggttgtacaaatatcatttctc 46952949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 428
Target Start/End: Complemental strand, 49761397 - 49761319
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||||||||||   ||||||| ||||  ||||||||| ||| ||||||| |||  ||||||||||||||    
T  49761397 aatagagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 49761319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 428
Target Start/End: Complemental strand, 54195433 - 54195351
Alignment:
Q  347 agtaatagagagataaagtaaaaatat-atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||||||||||||| || ||||||| || || ||||||||| |||  |||||| |||  ||||||||||||||    
T  54195433 agtaatagagagataaagtaaaaaaataatgtgagtataaaagagaaagttgtcactaaatggatgttcaaatatcatttctc 54195351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 431
Target Start/End: Original strand, 23868984 - 23869041
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctcata 431  Q
    ||||||| ||||| |||||| || | |||||||||||||| |||||||||||||||||    
T  23868984 atgtgagtatgaaagagaaaattgttataaaatggttgtacaaatatcatttctcata 23869041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 428
Target Start/End: Original strand, 52431220 - 52431260
Alignment:
Q  388 gagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||||||||| |||||||||||| |||||||    
T  52431220 gagaaagttatcataaaatgattgtataaatattatttctc 52431260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 430
Target Start/End: Original strand, 19418191 - 19418230
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctcat 430  Q
    |||||| |||||||||||||||| ||||||||||||||||    
T  19418191 aaagttgtcataaaatggttgtacaaatatcatttctcat 19418230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 425
Target Start/End: Complemental strand, 24645446 - 24645371
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcattt 425  Q
    |||||||||||||||||||||   ||||||| ||||  || |||||| ||||||||||| |||  |||||||||||    
T  24645446 aatagagagataaagtaaaaagtaatgtgagtatgagagaaaaagttgtcataaaatggatgttcaaatatcattt 24645371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 428
Target Start/End: Complemental strand, 28700551 - 28700472
Alignment:
Q  350 aatagagagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||| |||||||||| ||| |||||| ||||  || |||||| ||| |||||||||||  ||||||||||||||    
T  28700551 aatagagagagaaagtaaaaacataatgtgagtatgagagataaagttgtcaaaaaatggttgttcaaatatcatttctc 28700472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 405
Target Start/End: Original strand, 29573337 - 29573392
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaa 405  Q
    ||||||||||||||||||||| ||||||||| ||||  ||||||||| ||| ||||    
T  29573337 aatagagagataaagtaaaaacatatgtgagtatgagagagaaagttgtcacaaaa 29573392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 405
Target Start/End: Original strand, 45186529 - 45186588
Alignment:
Q  347 agtaatagagagataaagtaaaaatat-atgtgagcatgaacgagaaagttatcataaaa 405  Q
    ||||||||||||| ||||||||||||| ||||||||||||  ||||||||| ||| ||||    
T  45186529 agtaatagagagagaaagtaaaaatataatgtgagcatgagagagaaagttgtcacaaaa 45186588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 428
Target Start/End: Original strand, 55361214 - 55361293
Alignment:
Q  350 aatagagagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||| |||||||||| ||| |||||| || |  ||||||||| |||  ||||||||||| ||||||||||||||    
T  55361214 aatagagagagaaagtaaaaaaataatgtgagtataagagagaaagttgtcaagaaatggttgtacaaatatcatttctc 55361293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 31376746 - 31376792
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagtt 396  Q
    |||||||||||||||||||||  |||||||| ||||| |||||||||    
T  31376746 aatagagagataaagtaaaaaattatgtgagtatgaaagagaaagtt 31376792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 428
Target Start/End: Complemental strand, 46094501 - 46094423
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||| ||||||   ||||||| |||||  |||||||| ||||||||||  |||  ||||||||||||||    
T  46094501 aatagagagataaaataaaaaataatgtgagtatgaaatagaaagttgtcataaaatgaatgtccaaatatcatttctc 46094423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 428
Target Start/End: Complemental strand, 47683855 - 47683801
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||| ||||  ||||||||| ||| |||||||||||| ||||||||||||||    
T  47683855 atgtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctc 47683801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 428
Target Start/End: Complemental strand, 48117401 - 48117347
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||| ||||| ||||||||| |   |||||||||||||||||||||||||||    
T  48117401 atgtgagtatgaaagagaaagttgtacaaaaatggttgtataaatatcatttctc 48117347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 36907085 - 36907048
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||| | |||||||||||||||||||||||||||||    
T  36907085 aaagttgttataaaatggttgtataaatatcatttctc 36907048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 43499595 - 43499632
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  43499595 aaagttatcataaagtggttgtacaaatatcatttctc 43499632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 45754726 - 45754673
Alignment:
Q  352 tagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaa 405  Q
    |||||||||||||||||| |||||||||| || |  ||||||||| ||||||||    
T  45754726 tagagagataaagtaaaattatatgtgagtattagagagaaagttgtcataaaa 45754673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 50652425 - 50652388
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  50652425 aaagttgtcataaaatggttgtacaaatatcatttctc 50652388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 431
Target Start/End: Complemental strand, 1402687 - 1402647
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctcata 431  Q
    |||||| ||||||||||| |||| |||||||||||||||||    
T  1402687 aaagttgtcataaaatggatgtacaaatatcatttctcata 1402647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 430
Target Start/End: Original strand, 12094430 - 12094462
Alignment:
Q  398 tcataaaatggttgtataaatatcatttctcat 430  Q
    ||||||||| |||||||||||||||||||||||    
T  12094430 tcataaaatagttgtataaatatcatttctcat 12094462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 431
Target Start/End: Original strand, 34057987 - 34058027
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctcata 431  Q
    |||||||||||||||||| |||  |||||||||||||||||    
T  34057987 aaagttatcataaaatggatgttcaaatatcatttctcata 34058027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 395 - 431
Target Start/End: Original strand, 51230646 - 51230682
Alignment:
Q  395 ttatcataaaatggttgtataaatatcatttctcata 431  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  51230646 ttatcataaaatggttgtacaaatatcttttctcata 51230682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 428
Target Start/End: Original strand, 55344331 - 55344367
Alignment:
Q  392 aagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  55344331 aagttatcacaaaatggttgtacaaatatcatttctc 55344367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 431
Target Start/End: Complemental strand, 40139190 - 40139123
Alignment:
Q  365 taaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctcata 431  Q
    |||||||||| |||||| ||||  ||||||||| |||||||||||||||| |||||||||||||||||    
T  40139190 taaaaatataatgtgagtatgagagagaaagttgtcataaaatggttgtacaaatatcatttctcata 40139123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 430
Target Start/End: Original strand, 41507174 - 41507256
Alignment:
Q  349 taatagagagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctcat 430  Q
    ||||||| ||||||||||| || ||| |||||| ||||  ||||||||| ||| |||||||||||| ||||||||||||||||    
T  41507174 taatagatagataaagtaagaacataatgtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctcat 41507256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 428
Target Start/End: Original strand, 50781551 - 50781629
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||||||||||   ||||||| ||||  ||||||||| ||||||||||| |||  ||||||||||||||    
T  50781551 aatagagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcataaaatggatgttcaaatatcatttctc 50781629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 427
Target Start/End: Original strand, 19969543 - 19969620
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttct 427  Q
    |||||||||||||||||||||   ||||||| ||||  ||||||||| ||||||||||| |||  |||||||||||||    
T  19969543 aatagagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcataaaatggatgttcaaatatcatttct 19969620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 428
Target Start/End: Original strand, 48220125 - 48220203
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||||||||||   ||||||| ||||  ||||||||| ||| ||||||| |||  ||||||||||||||    
T  48220125 aatagagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 48220203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 29706737 - 29706774
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  29706737 aaagttatcataaaatggttgtacaaatatcatttctc 29706774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 430
Target Start/End: Complemental strand, 18336236 - 18336156
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctcat 430  Q
    |||||||||||||||||||||   ||||||| ||||  ||||||||| ||| ||||||  |||  ||||||||||||||||    
T  18336236 aatagagagataaagtaaaaactaatgtgagtatgagagagaaagttgtcacaaaatgaatgttcaaatatcatttctcat 18336156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 428
Target Start/End: Original strand, 34974780 - 34974820
Alignment:
Q  388 gagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||| ||| |||||||||||||||||||||||||||    
T  34974780 gagaaagttgtcacaaaatggttgtataaatatcatttctc 34974820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 428
Target Start/End: Original strand, 43612100 - 43612140
Alignment:
Q  388 gagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||| |||||||||||||||| ||||||||||||||    
T  43612100 gagaaagttgtcataaaatggttgtacaaatatcatttctc 43612140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 431
Target Start/End: Original strand, 49699790 - 49699826
Alignment:
Q  395 ttatcataaaatggttgtataaatatcatttctcata 431  Q
    ||||||||||||||||||| |||||||||||||||||    
T  49699790 ttatcataaaatggttgtacaaatatcatttctcata 49699826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 425
Target Start/End: Complemental strand, 17652722 - 17652643
Alignment:
Q  347 agtaatagagagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcattt 425  Q
    ||||||||||| | |||||| ||||||| |||||| |||| |||||||||| | |||||||  ||||| |||||||||||    
T  17652722 agtaatagagaaagaaagtataaatataatgtgagtatgagcgagaaagttgttataaaatacttgtacaaatatcattt 17652643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 429
Target Start/End: Original strand, 31847222 - 31847257
Alignment:
Q  394 gttatcataaaatggttgtataaatatcatttctca 429  Q
    |||||||||||||||||||| |||||||||||||||    
T  31847222 gttatcataaaatggttgtacaaatatcatttctca 31847257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 429
Target Start/End: Original strand, 32319287 - 32319369
Alignment:
Q  347 agtaatagagagataaagt-aaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctca 429  Q
    |||||||||||||| |||| ||||||| ||||||| ||||  ||||||||| |||  |||||| ||| ||||||||||||||||    
T  32319287 agtaatagagagatgaagtgaaaaata-atgtgagtatgagagagaaagttgtcaccaaatggatgtttaaatatcatttctca 32319369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 428
Target Start/End: Original strand, 33358143 - 33358218
Alignment:
Q  354 gagagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||||||||| ||| |||||| ||||  ||||||||| ||| ||||||| |||  ||||||||||||||    
T  33358143 gagagataaagtaaaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 33358218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 405
Target Start/End: Complemental strand, 46281526 - 46281471
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaa 405  Q
    ||||||||||||||||||||| ||||||||| ||||  ||||||||| ||| ||||    
T  46281526 aatagagagataaagtaaaaacatatgtgagtatgagagagaaagttgtcacaaaa 46281471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 431
Target Start/End: Original strand, 48872048 - 48872091
Alignment:
Q  388 gagaaagttatcataaaatggttgtataaatatcatttctcata 431  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||    
T  48872048 gagaaagttgtcaaaaaatggttgtacaaatatcatttctcata 48872091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 428
Target Start/End: Complemental strand, 8200165 - 8200087
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||| |||||||||||||   ||||||| ||||  ||||||||| ||| ||||||| |||  ||||||||||||||    
T  8200165 aatagagggataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 8200087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 37588656 - 37588702
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagtt 396  Q
    |||||||||||||||||||||  |||||||| ||||| |||||||||    
T  37588656 aatagagagataaagtaaaaaattatgtgagtatgaaagagaaagtt 37588702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 425
Target Start/End: Original strand, 39380853 - 39380887
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcattt 425  Q
    |||||| ||||||||||||||||||||||||||||    
T  39380853 aaagttgtcataaaatggttgtataaatatcattt 39380887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 428
Target Start/End: Original strand, 40596060 - 40596114
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||| ||||  ||||||||| ||| |||||||||||| ||||||||||||||    
T  40596060 atgtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctc 40596114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 428
Target Start/End: Complemental strand, 44632618 - 44632540
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||||||||||   ||||||| ||||  ||||||||| |||  |||||| |||  ||||||||||||||    
T  44632618 aatagagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcaccaaatggatgttcaaatatcatttctc 44632540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 427
Target Start/End: Original strand, 51080071 - 51080148
Alignment:
Q  350 aatagagagataaagtaaaaatat-atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttct 427  Q
    |||||||||| ||||||||||||| |||| ||||| |  ||||||||| ||| ||||| |||||| |||||||||||||    
T  51080071 aatagagagagaaagtaaaaatataatgtaagcattagagagaaagttgtca-aaaatagttgtacaaatatcatttct 51080148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 366694 - 366657
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  366694 aaagttatcagaaagtggttgtataaatatcatttctc 366657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 11947832 - 11947795
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  11947832 aaagttgtcataaaatggttgtacaaatatcatttctc 11947795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 27352667 - 27352630
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  27352667 aaagttatcacaaaatggttgtacaaatatcatttctc 27352630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 29489393 - 29489430
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  29489393 aaagttatcacaaaatggttgtacaaatatcatttctc 29489430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 30530608 - 30530645
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  30530608 aaagttgtcacaaaatggttgtataaatatcatttctc 30530645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 31184318 - 31184281
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  31184318 aaagttgtcataaaatggttgtacaaatatcatttctc 31184281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 32873378 - 32873341
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  32873378 aaagttatcataaaatggatgtacaaatatcatttctc 32873341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 428
Target Start/End: Original strand, 43755716 - 43755749
Alignment:
Q  395 ttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||||||||||| ||||||||||||||    
T  43755716 ttatcataaaatggttgtacaaatatcatttctc 43755749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 405
Target Start/End: Complemental strand, 9988042 - 9987986
Alignment:
Q  350 aatagagagataaagtaaaaatat-atgtgagcatgaacgagaaagttatcataaaa 405  Q
    |||||||||| ||||||||||||| ||||||| ||||| ||||||||| ||| ||||    
T  9988042 aatagagagagaaagtaaaaatataatgtgagtatgaaagagaaagttgtcacaaaa 9987986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 429
Target Start/End: Complemental strand, 11597727 - 11597647
Alignment:
Q  350 aatagagagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctca 429  Q
    |||||||||| |||||||||| ||| |||||| |||   ||||||||| ||| ||| |||||||| | |||||||||||||    
T  11597727 aatagagagagaaagtaaaaacataatgtgagtatggcagagaaagttgtcacaaattggttgtacagatatcatttctca 11597647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 430
Target Start/End: Original strand, 16252765 - 16252821
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctcat 430  Q
    ||||||| ||||| ||||||||| |   |||||||||||| ||||||||||||||||    
T  16252765 atgtgagtatgaaagagaaagttgtacaaaaatggttgtacaaatatcatttctcat 16252821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 428
Target Start/End: Original strand, 21446214 - 21446278
Alignment:
Q  365 taaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||| |||||| ||||  ||||||||| |  ||||||| ||||||||||||||||||||    
T  21446214 taaaaatataatgtgagtatgagagagaaagttgtactaaaatgattgtataaatatcatttctc 21446278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 427
Target Start/End: Complemental strand, 26839419 - 26839383
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttct 427  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  26839419 aaagttatcataaaatggttgtacaaataccatttct 26839383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 428
Target Start/End: Original strand, 27687515 - 27687579
Alignment:
Q  365 taaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||| |||||| ||||  || |||||| ||| |||||||||||| ||||||||||||||    
T  27687515 taaaaatataatgtgagtatgagagataaagttgtcacaaaatggttgtacaaatatcatttctc 27687579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 406
Target Start/End: Complemental strand, 51466857 - 51466802
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaat 406  Q
    ||||||||||||||||||||||| ||||||| ||||| || |||||| ||| |||||    
T  51466857 aatagagagataaagtaaaaata-atgtgagtatgaaagaaaaagttgtcaaaaaat 51466802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 430
Target Start/End: Complemental strand, 52261377 - 52261337
Alignment:
Q  390 gaaagttatcataaaatggttgtataaatatcatttctcat 430  Q
    ||||||||||||||||| |||||  ||||||||||||||||    
T  52261377 gaaagttatcataaaatagttgttcaaatatcatttctcat 52261337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 428
Target Start/End: Complemental strand, 9226390 - 9226313
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||||||||||||||| ||||||| ||||  ||||||||| |||| |||||| |||  ||||||||||||||    
T  9226390 aatagagagataaagtaaaaata-atgtgagtatgagagagaaagttgtcattaaatggatgttcaaatatcatttctc 9226313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 425
Target Start/End: Original strand, 41865605 - 41865676
Alignment:
Q  355 agagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcattt 425  Q
    |||||||||||||||||||| |||||| ||||| || ||| || ||| ||||| ||||||||||||||||||    
T  41865605 agagataaagtaaaaatataatgtgagtatgaaagataaaattgtcacaaaatagttgtataaatatcattt 41865676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 7144614 - 7144577
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  7144614 aaagttatcataaaatggttgtacaaatatcatttctc 7144577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 376 - 429
Target Start/End: Complemental strand, 38036764 - 38036711
Alignment:
Q  376 gtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctca 429  Q
    ||||||||||  ||||||||| || |||||||||||| ||||||||||||||||    
T  38036764 gtgagcatgagagagaaagttgtcgtaaaatggttgtttaaatatcatttctca 38036711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 428
Target Start/End: Complemental strand, 12878796 - 12878756
Alignment:
Q  388 gagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  12878796 gagaaagttataataaaatggttgtacaaatatcatttctc 12878756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 405
Target Start/End: Original strand, 6940131 - 6940186
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaa 405  Q
    ||||||||||||||||||||| ||||||||| ||||  ||||||||| ||| ||||    
T  6940131 aatagagagataaagtaaaaacatatgtgagtatgagagagaaagttgtcacaaaa 6940186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 405
Target Start/End: Complemental strand, 18695408 - 18695353
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaa 405  Q
    ||||||||||||||||||||| ||||||||| ||||  ||||||||| ||| ||||    
T  18695408 aatagagagataaagtaaaaacatatgtgagtatgagagagaaagttgtcacaaaa 18695353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 429
Target Start/End: Original strand, 30334772 - 30334827
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctca 429  Q
    ||||||| ||||| |||||| || ||||||| |||||||| |||||||||||||||    
T  30334772 atgtgagtatgaaagagaaaattgtcataaagtggttgtacaaatatcatttctca 30334827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 429
Target Start/End: Complemental strand, 30776666 - 30776635
Alignment:
Q  398 tcataaaatggttgtataaatatcatttctca 429  Q
    ||||||||||||||||||||||||||||||||    
T  30776666 tcataaaatggttgtataaatatcatttctca 30776635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 428
Target Start/End: Original strand, 6865781 - 6865847
Alignment:
Q  363 agtaaaaatat-atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||| ||||||| ||||  ||||||||| ||| ||| |||||||| ||||||||||||||    
T  6865781 agtaaaaatattatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctc 6865847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 428
Target Start/End: Original strand, 13734366 - 13734420
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||| ||||  ||||||||| ||||||| |||||||| ||||||||||||||    
T  13734366 atgtgagtatgagagagaaagttgtcataaagtggttgtacaaatatcatttctc 13734420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 428
Target Start/End: Complemental strand, 14206454 - 14206400
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||| ||||  ||||||||| ||| |||||||||||| ||||||||||||||    
T  14206454 atgtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctc 14206400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 425
Target Start/End: Original strand, 32360521 - 32360555
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcattt 425  Q
    |||||||||||| ||||||||||||||||||||||    
T  32360521 aaagttatcatagaatggttgtataaatatcattt 32360555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 404
Target Start/End: Original strand, 34888790 - 34888843
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaa 404  Q
    ||||||||||||||||||||||| |||||||  |||| ||||||||| |||||||    
T  34888790 aatagagagataaagtaaaaata-atgtgagtgtgaaagagaaagttgtcataaa 34888843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 390 - 424
Target Start/End: Complemental strand, 38890452 - 38890418
Alignment:
Q  390 gaaagttatcataaaatggttgtataaatatcatt 424  Q
    ||||||||||||||||| |||||||||||||||||    
T  38890452 gaaagttatcataaaatagttgtataaatatcatt 38890418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 430
Target Start/End: Complemental strand, 16143429 - 16143388
Alignment:
Q  389 agaaagttatcataaaatggttgtataaatatcatttctcat 430  Q
    |||||||| ||| |||||||||||| ||||||||||||||||    
T  16143429 agaaagttgtcacaaaatggttgtacaaatatcatttctcat 16143388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 35814490 - 35814453
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  35814490 aaagttatcacaaaatggttgtacaaatatcatttctc 35814453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 428
Target Start/End: Original strand, 372716 - 372780
Alignment:
Q  365 taaaaatat-atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||| ||||||| ||||  ||||||||| ||| |||||||||||| ||| ||||||||||    
T  372716 taaaaatatcatgtgagtatgagagagaaagttgtcacaaaatggttgtacaaaaatcatttctc 372780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 405
Target Start/End: Original strand, 7287170 - 7287226
Alignment:
Q  350 aatagagagataaagtaaaaatat-atgtgagcatgaacgagaaagttatcataaaa 405  Q
    |||||||||| ||||||||||||| ||||||| ||||| ||||||||| ||| ||||    
T  7287170 aatagagagagaaagtaaaaatataatgtgagtatgaaagagaaagttgtcacaaaa 7287226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 430
Target Start/End: Complemental strand, 13461802 - 13461762
Alignment:
Q  390 gaaagttatcataaaatggttgtataaatatcatttctcat 430  Q
    ||||||||||| |||||| |||||||||| |||||||||||    
T  13461802 gaaagttatcacaaaatgattgtataaatttcatttctcat 13461762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 405
Target Start/End: Complemental strand, 38493715 - 38493659
Alignment:
Q  350 aatagagagataaagtaaaaatat-atgtgagcatgaacgagaaagttatcataaaa 405  Q
    |||||||||||||||||||| ||| ||||||| ||||  ||||||||||||| ||||    
T  38493715 aatagagagataaagtaaaattataatgtgagtatgagagagaaagttatcacaaaa 38493659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 427
Target Start/End: Complemental strand, 7817726 - 7817650
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttct 427  Q
    ||||||||||||||||||||||| ||||||| ||||  ||||||||| ||| ||||||| |||  |||||||||||||    
T  7817726 aatagagagataaagtaaaaata-atgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 7817650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 405
Target Start/End: Complemental strand, 48145618 - 48145559
Alignment:
Q  347 agtaatagagagataaagtaaaaatat-atgtgagcatgaacgagaaagttatcataaaa 405  Q
    ||||||||||||| ||||||||||||| ||||||| |||| | |||||||||||||||||    
T  48145618 agtaatagagagagaaagtaaaaatataatgtgagtatgagcaagaaagttatcataaaa 48145559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 428
Target Start/End: Complemental strand, 26041375 - 26041321
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||| ||||| ||||||||| ||||||||||||||||  |||||||||||||    
T  26041375 atgtgagtatgaaagagaaagttgtcataaaatggttgtacgaatatcatttctc 26041321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 428
Target Start/End: Original strand, 47078232 - 47078310
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||||||||||   ||||||| ||||  ||||||||| ||||||||| | |||  ||||||||||||||    
T  47078232 aatagagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcataaaatagatgttcaaatatcatttctc 47078310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 5068657 - 5068694
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  5068657 aaagttatcataaaatggttgtacaaatatcatttctc 5068694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 47530325 - 47530362
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||| |||||||||||||||||||||||||||||||    
T  47530325 aaagttgtcataaaatggttgtataaatatcatttctc 47530362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 405
Target Start/End: Original strand, 1471272 - 1471327
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaa 405  Q
    ||||||||||||||||||||| ||||||||| ||||  ||||||||| ||| ||||    
T  1471272 aatagagagataaagtaaaaacatatgtgagtatgagagagaaagttgtcacaaaa 1471327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 405
Target Start/End: Complemental strand, 17002430 - 17002371
Alignment:
Q  347 agtaatagagagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaa 405  Q
    ||||||||| ||| || ||||||||||| |||||| ||||| ||||||||||||||||||    
T  17002430 agtaatagaaagagaaggtaaaaatataatgtgagtatgaaagagaaagttatcataaaa 17002371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 405
Target Start/End: Complemental strand, 46829569 - 46829514
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaa 405  Q
    ||||||||||||||||||||| ||||||||| ||||  ||||||||| ||| ||||    
T  46829569 aatagagagataaagtaaaaacatatgtgagtatgagagagaaagttgtcacaaaa 46829514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 428
Target Start/End: Complemental strand, 2323358 - 2323304
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||| ||||  ||||||||| ||||||||| |||||| ||||||||||||||    
T  2323358 atgtgagtatgagagagaaagttgtcataaaattgttgtacaaatatcatttctc 2323304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 428
Target Start/End: Original strand, 28862095 - 28862141
Alignment:
Q  382 atgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||| ||||||||| ||||||||||| |||| ||||||||||||||    
T  28862095 atgaaagagaaagttgtcataaaatggatgtacaaatatcatttctc 28862141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 429
Target Start/End: Complemental strand, 29763867 - 29763829
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctca 429  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  29763867 aaagttatcacaaaatggttgtacaaatatcatttctca 29763829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 428
Target Start/End: Original strand, 31785477 - 31785531
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||| ||||  ||||||||| ||||||| |||||||| ||||||||||||||    
T  31785477 atgtgagtatgagagagaaagttttcataaagtggttgtacaaatatcatttctc 31785531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 428
Target Start/End: Original strand, 34992349 - 34992395
Alignment:
Q  382 atgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||| |||| |||| |||||||||||||||| ||||||||||||||    
T  34992349 atgaaagagagagttgtcataaaatggttgtacaaatatcatttctc 34992395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 428
Target Start/End: Complemental strand, 43444701 - 43444635
Alignment:
Q  363 agtaaaaatat-atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||| |||| || ||||  ||||||||| ||||||| |||||||| ||||||||||||||    
T  43444701 agtaaaaatatgatgtaagtatgagagagaaagttgtcataaagtggttgtacaaatatcatttctc 43444635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 427
Target Start/End: Complemental strand, 3062420 - 3062343
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttct 427  Q
    |||||||||||||||||||||   ||||||| || |  ||||||||| ||| ||||||| |||  |||||||||||||    
T  3062420 aatagagagataaagtaaaaagtaatgtgagtataagagagaaagttgtcacaaaatggatgttcaaatatcatttct 3062343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 16567353 - 16567316
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  16567353 aaagttataataaaatggttgtacaaatatcatttctc 16567316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 16598309 - 16598346
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  16598309 aaagttataataaaatggttgtacaaatatcatttctc 16598346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 22692121 - 22692084
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  22692121 aaagttgtcataaaatggttgtacaaatatcatttctc 22692084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 44894507 - 44894544
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  44894507 aaagttatcataaaatggatgtacaaatatcatttctc 44894544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 431
Target Start/End: Complemental strand, 17500734 - 17500694
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctcata 431  Q
    |||||||| ||||| |||||||| |||||||||||||||||    
T  17500734 aaagttataataaagtggttgtacaaatatcatttctcata 17500694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 431
Target Start/End: Original strand, 17552480 - 17552520
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctcata 431  Q
    |||||||| ||||| |||||||| |||||||||||||||||    
T  17552480 aaagttataataaagtggttgtacaaatatcatttctcata 17552520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 425
Target Start/End: Original strand, 23680019 - 23680095
Alignment:
Q  350 aatagagagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcattt 425  Q
    |||||||||| |||||||||| ||| |||| | |||||  |||||||| ||| ||||| |||||| |||||||||||    
T  23680019 aatagagagacaaagtaaaaacataatgtgtgtatgaaaaagaaagttgtcacaaaatagttgtacaaatatcattt 23680095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 431
Target Start/End: Complemental strand, 26153683 - 26153643
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctcata 431  Q
    |||||| ||||||||| |||||| |||||||||||||||||    
T  26153683 aaagttgtcataaaatagttgtacaaatatcatttctcata 26153643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 427
Target Start/End: Original strand, 30818031 - 30818067
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttct 427  Q
    |||||| |||||||||||||||| |||||||||||||    
T  30818031 aaagttgtcataaaatggttgtacaaatatcatttct 30818067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 405
Target Start/End: Complemental strand, 42584893 - 42584837
Alignment:
Q  350 aatagagagataaagtaaaaatat-atgtgagcatgaacgagaaagttatcataaaa 405  Q
    |||||||||||||||||||||||| ||||||| ||||  ||||||||| ||| ||||    
T  42584893 aatagagagataaagtaaaaatataatgtgagtatgagagagaaagttgtcacaaaa 42584837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 427
Target Start/End: Original strand, 43171207 - 43171243
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttct 427  Q
    |||||| |||||||||||||||| |||||||||||||    
T  43171207 aaagttgtcataaaatggttgtacaaatatcatttct 43171243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000002; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 428
Target Start/End: Original strand, 30439487 - 30439565
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||||||||||   ||||||| ||||  ||||||||| ||| ||||||| |||  ||||||||||||||    
T  30439487 aatagagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctc 30439565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 427
Target Start/End: Original strand, 32020450 - 32020524
Alignment:
Q  354 gagagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttct 427  Q
    |||||| |||||||||| ||| || ||| ||||  ||||||||||||| |||||||||||| |||||||||||||    
T  32020450 gagagagaaagtaaaaacataatgcgagtatgagagagaaagttatcaaaaaatggttgtacaaatatcatttct 32020524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 425
Target Start/End: Complemental strand, 26000628 - 26000552
Alignment:
Q  350 aatagagagataaagtaaaaatatat-gtgagcatgaacgagaaagttatcataaaatggttgtataaatatcattt 425  Q
    |||||||||||||| |||||| |||  ||||| ||||  || |||||| |||||||||||||||| |||||||||||    
T  26000628 aatagagagataaaataaaaacataacgtgagtatgagagataaagttgtcataaaatggttgtaaaaatatcattt 26000552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 428
Target Start/End: Original strand, 5740766 - 5740845
Alignment:
Q  350 aatagagagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||| |||||||||| ||| |||||| ||||  || |||||| ||| ||| |||||||| ||||||||||||||    
T  5740766 aatagagagagaaagtaaaaacataatgtgagtatgagagaaaaagttgtcaaaaagtggttgtacaaatatcatttctc 5740845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 430
Target Start/End: Complemental strand, 14531658 - 14531619
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctcat 430  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  14531658 aaagttatcataaaatagttgtacaaatatcatttctcat 14531619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 428
Target Start/End: Original strand, 37392134 - 37392188
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||| ||||  ||||||||| ||| |||||||||||| ||||||||||||||    
T  37392134 atgtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctc 37392188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 405
Target Start/End: Complemental strand, 38234100 - 38234042
Alignment:
Q  347 agtaatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaa 405  Q
    ||||||||||||||||||||||||  |||||||| ||||  ||||||||| ||| ||||    
T  38234100 agtaatagagagataaagtaaaaaattatgtgagtatgagagagaaagttgtcacaaaa 38234042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 427
Target Start/End: Complemental strand, 39211132 - 39211054
Alignment:
Q  350 aatagagagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttct 427  Q
    |||||||||| |||||||||| | | |||||| ||||  ||||||||| ||| |||||||||||  |||||||||||||    
T  39211132 aatagagagaaaaagtaaaaacaaaatgtgagtatgagagagaaagttgtcaaaaaatggttgttcaaatatcatttct 39211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 431
Target Start/End: Complemental strand, 40517308 - 40517266
Alignment:
Q  389 agaaagttatcataaaatggttgtataaatatcatttctcata 431  Q
    ||||| ||||||||||||||||||| |||||| ||||||||||    
T  40517308 agaaaattatcataaaatggttgtacaaatataatttctcata 40517266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 425
Target Start/End: Complemental strand, 157139 - 157070
Alignment:
Q  357 agataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcattt 425  Q
    |||||||||||||||||| ||| || ||||  ||||||||| ||  |||||||||||| |||||||||||    
T  157139 agataaagtaaaaatataatgtaagtatgagagagaaagttgtcgcaaaatggttgtacaaatatcattt 157070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 2768184 - 2768147
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  2768184 aaagttatcataaaacggttgtacaaatatcatttctc 2768147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 6105051 - 6105014
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  6105051 aaagttaccataaaatggttgcataaatatcatttctc 6105014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 6849295 - 6849332
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  6849295 aaagttgtcacaaaatggttgtataaatatcatttctc 6849332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 7375813 - 7375850
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  7375813 aaagttatcataaaatggatgtttaaatatcatttctc 7375850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 12655959 - 12655922
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  12655959 aaagttattataaaatggttgtacaaatatcatttctc 12655922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 428
Target Start/End: Complemental strand, 20852952 - 20852919
Alignment:
Q  395 ttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||||||||||| ||||||||||||||    
T  20852952 ttatcataaaatggttgtacaaatatcatttctc 20852919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 431
Target Start/End: Original strand, 30112825 - 30112874
Alignment:
Q  382 atgaacgagaaagttatcataaaatggttgtataaatatcatttctcata 431  Q
    ||||| ||||||||||||| |||||| ||||| |||||| ||||||||||    
T  30112825 atgaaagagaaagttatcacaaaatgattgtacaaatataatttctcata 30112874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 33605112 - 33605149
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  33605112 aaagttatcataaaatggttgttcaaatatcatttctc 33605149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 37873139 - 37873176
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||||||||| || ||||||||||||||    
T  37873139 aaagttatcataaaatggttttacaaatatcatttctc 37873176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 39021477 - 39021514
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  39021477 aaagttatcacaaaatggttgtacaaatatcatttctc 39021514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 42012624 - 42012661
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||| | |||||||||||||||||||||    
T  42012624 aaagttatcataaagtagttgtataaatatcatttctc 42012661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 398
Target Start/End: Original strand, 8671533 - 8671585
Alignment:
Q  347 agtaatagagagataaagtaaaaatat-atgtgagcatgaacgagaaagttat 398  Q
    ||||||||||||||||||||||||||| ||| ||| ||||  |||||||||||    
T  8671533 agtaatagagagataaagtaaaaatataatgcgagtatgagagagaaagttat 8671585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 427
Target Start/End: Original strand, 10553833 - 10553869
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttct 427  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  10553833 aaagttatcacaaaatggttgtataaatatgatttct 10553869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 428
Target Start/End: Complemental strand, 16487650 - 16487610
Alignment:
Q  388 gagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||| |||||||||||||||  ||||||||||||||    
T  16487650 gagaaagttgtcataaaatggttgttcaaatatcatttctc 16487610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 431
Target Start/End: Original strand, 28623145 - 28623185
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctcata 431  Q
    |||||||||| | |||||||||| |||||||||||||||||    
T  28623145 aaagttatcacataatggttgtacaaatatcatttctcata 28623185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 431
Target Start/End: Original strand, 31731457 - 31731497
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctcata 431  Q
    |||||| ||||||| | ||||||||||||||||||||||||    
T  31731457 aaagttgtcataaattagttgtataaatatcatttctcata 31731497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 431
Target Start/End: Original strand, 38844824 - 38844864
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctcata 431  Q
    |||||| ||| |||||||||||| |||||||||||||||||    
T  38844824 aaagttgtcacaaaatggttgtacaaatatcatttctcata 38844864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 427
Target Start/End: Original strand, 16352141 - 16352219
Alignment:
Q  350 aatagagagataaagtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttct 427  Q
    ||||| |||| |||||||||||||| |||||  ||||  |||||| || | ||||||||||||||||||||||||||||    
T  16352141 aatagtgagagaaagtaaaaatataatgtgattatgagagagaaaattgttataaaatggttgtataaatatcatttct 16352219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 431
Target Start/End: Complemental strand, 33527489 - 33527432
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctcata 431  Q
    ||||||| ||||  ||||||||||||| ||| | ||||||||||||||||||||||||    
T  33527489 atgtgaggatgagagagaaagttatcacaaagtagttgtataaatatcatttctcata 33527432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 425
Target Start/End: Original strand, 14693236 - 14693308
Alignment:
Q  353 agagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcattt 425  Q
    ||||||||||||||||||   ||||||| || || ||||||||||||| ||||||| |||  |||||||||||    
T  14693236 agagagataaagtaaaaaataatgtgagtatcaaagagaaagttatcacaaaatggatgttcaaatatcattt 14693308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 427
Target Start/End: Complemental strand, 32621838 - 32621802
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttct 427  Q
    |||||| ||||||||||||||||||||||||||||||    
T  32621838 aaagttgtcataaaatggttgtataaatatcatttct 32621802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 430
Target Start/End: Complemental strand, 32644689 - 32644621
Alignment:
Q  363 agtaaaaatata-tgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctcat 430  Q
    |||||||||||| |||||| ||||  ||||||||| ||| ||||| |||||| ||||||||||||||||    
T  32644689 agtaaaaatataatgtgagtatgagagagaaagttgtcaaaaaatagttgtacaaatatcatttctcat 32644621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 428
Target Start/End: Original strand, 5028247 - 5028325
Alignment:
Q  350 aatagagagataaagtaaaaatatatgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||| ||||||||||||||||   ||||||| || |  ||||||||| ||| ||||||| ||| |||||||||||||||    
T  5028247 aataaagagataaagtaaaaagtaatgtgagtataagagagaaagttgtcacaaaatggatgtttaaatatcatttctc 5028325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 425
Target Start/End: Complemental strand, 29173027 - 29172993
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcattt 425  Q
    ||||||||||||||||||||||| |||||||||||    
T  29173027 aaagttatcataaaatggttgtacaaatatcattt 29172993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 431
Target Start/End: Original strand, 21857608 - 21857641
Alignment:
Q  398 tcataaaatggttgtataaatatcatttctcata 431  Q
    |||||||||||||||| |||||||||||||||||    
T  21857608 tcataaaatggttgtacaaatatcatttctcata 21857641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 31204844 - 31204881
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  31204844 aaagttatcaaaaaatggttgtagaaatatcatttctc 31204881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 31417330 - 31417367
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  31417330 aaagttgtcataaaatgattgtataaatatcatttctc 31417367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 428
Target Start/End: Complemental strand, 1897737 - 1897697
Alignment:
Q  388 gagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||| ||||||| |||||||| ||||||||||||||    
T  1897737 gagaaagttgtcataaagtggttgtacaaatatcatttctc 1897697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 428
Target Start/End: Complemental strand, 28670558 - 28670526
Alignment:
Q  396 tatcataaaatggttgtataaatatcatttctc 428  Q
    |||||||||||||||||| ||||||||||||||    
T  28670558 tatcataaaatggttgtacaaatatcatttctc 28670526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 428
Target Start/End: Complemental strand, 30945863 - 30945823
Alignment:
Q  388 gagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||| ||| |||||| ||||||||||||||||||||    
T  30945863 gagaaagttgtcacaaaatgattgtataaatatcatttctc 30945823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 4352 - 4315
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  4352 aaagttatcataaaatggttgtacaaatatcatttctc 4315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 431
Target Start/End: Complemental strand, 26458 - 26418
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctcata 431  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  26458 aaagttatcataaaacggttgtttaaatatcatttctcata 26418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 433
Target Start/End: Original strand, 29778 - 29837
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctcatagt 433  Q
    ||||||||||||   |||||||| ||| ||| ||||||||||||||||||||||| ||||    
T  29778 atgtgagcatgagaaagaaagttgtcaaaaagtggttgtataaatatcatttctcttagt 29837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0252 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 391 - 425
Target Start/End: Original strand, 8009 - 8043
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcattt 425  Q
    |||||| ||||||||||||||||||||||||||||    
T  8009 aaagttgtcataaaatggttgtataaatatcattt 8043  T

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Target: scaffold0178 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 436
Target Start/End: Complemental strand, 9802 - 9768
Alignment:
Q  402 aaaatggttgtataaatatcatttctcatagttaa 436  Q
    |||||||||||| ||||||||||||||||||||||    
T  9802 aaaatggttgtacaaatatcatttctcatagttaa 9768  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 428
Target Start/End: Original strand, 31606 - 31660
Alignment:
Q  374 atgtgagcatgaacgagaaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||| ||||  ||||||||| ||| |||||||||||| ||||||||||||||    
T  31606 atgtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctc 31660  T

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Target: scaffold0257 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 24018 - 23981
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctc 428  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  24018 aaagttatcataaaatggttgttcaaatatcatttctc 23981  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 431
Target Start/End: Complemental strand, 6464 - 6424
Alignment:
Q  391 aaagttatcataaaatggttgtataaatatcatttctcata 431  Q
    |||||| ||||||||||| |||| |||||||||||||||||    
T  6464 aaagttgtcataaaatggatgtacaaatatcatttctcata 6424  T

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