View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12585_low_16 (Length: 245)
Name: NF12585_low_16
Description: NF12585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12585_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 37396958 - 37397190
Alignment:
| Q |
1 |
cccttattgttcaaagttgtcgcaaattgacgagataaataattaaaccgttaagaaaatacattgttgctgaaaatccaaataaaatttggtgataatg |
100 |
Q |
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| T |
37396958 |
cccttattgttcaaaattgtcgcaaattgacgagataaataattaaaccattaagaaaatacattgttgctgaaaatccaaataaaatttggtgataatg |
37397057 |
T |
|
| Q |
101 |
agtttgtatgaagacgagtgcttgaagtgtgtgaatgagaaaatggttttaagtttttgtgaaacctttgtggttaagaaatgaaaagtgggattaggtc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37397058 |
agtttgtatgaagacgagtgcttgaagtgtgtgaatgagaaaatggttttaagtttttgtgaaacctttgtggttaagaaatgaaaagtgggattaggtc |
37397157 |
T |
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| Q |
201 |
gacaaaaccatagtaaactgattaatggcagtg |
233 |
Q |
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|||||||||||||||||||||||||||| |||| |
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| T |
37397158 |
gacaaaaccatagtaaactgattaatggtagtg |
37397190 |
T |
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