View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1258_low_60 (Length: 251)

Name: NF1258_low_60
Description: NF1258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1258_low_60
NF1258_low_60
[»] chr2 (33 HSPs)
chr2 (67-251)||(10393220-10393404)
chr2 (12-67)||(5067663-5067718)
chr2 (13-66)||(36435681-36435734)
chr2 (12-67)||(11229338-11229393)
chr2 (12-71)||(23880090-23880149)
chr2 (12-66)||(5455470-5455524)
chr2 (12-66)||(9449432-9449486)
chr2 (28-70)||(13553143-13553185)
chr2 (12-69)||(546402-546459)
chr2 (27-67)||(4738604-4738644)
chr2 (27-67)||(33296103-33296143)
chr2 (27-67)||(34139070-34139110)
chr2 (12-67)||(13711060-13711115)
chr2 (12-67)||(14954616-14954671)
chr2 (28-67)||(18508077-18508116)
chr2 (28-67)||(22966785-22966824)
chr2 (27-66)||(39247495-39247534)
chr2 (28-70)||(6884906-6884948)
chr2 (12-70)||(10288146-10288204)
chr2 (12-66)||(12600048-12600102)
chr2 (27-65)||(26321729-26321767)
chr2 (27-65)||(26321897-26321935)
chr2 (28-66)||(30856807-30856845)
chr2 (28-70)||(35589420-35589462)
chr2 (28-70)||(39449150-39449192)
chr2 (27-68)||(6365184-6365225)
chr2 (28-69)||(36909876-36909917)
chr2 (27-68)||(37966365-37966406)
chr2 (12-72)||(1889141-1889201)
chr2 (27-67)||(5167774-5167814)
chr2 (27-67)||(34442112-34442152)
chr2 (31-67)||(42283275-42283311)
chr2 (27-67)||(44189826-44189866)
[»] chr7 (36 HSPs)
chr7 (82-244)||(3788261-3788420)
chr7 (29-69)||(25887591-25887631)
chr7 (18-66)||(40717259-40717307)
chr7 (12-67)||(12141898-12141953)
chr7 (30-72)||(156017-156059)
chr7 (12-66)||(7807055-7807109)
chr7 (12-70)||(13437194-13437252)
chr7 (12-70)||(19426576-19426634)
chr7 (28-70)||(43079665-43079707)
chr7 (27-68)||(44894505-44894546)
chr7 (13-66)||(48866948-48867001)
chr7 (28-72)||(25614854-25614898)
chr7 (12-64)||(28596908-28596960)
chr7 (12-67)||(28824502-28824557)
chr7 (28-67)||(38023457-38023496)
chr7 (27-66)||(42663084-42663123)
chr7 (29-67)||(2469702-2469740)
chr7 (12-66)||(17500697-17500751)
chr7 (12-66)||(17552463-17552517)
chr7 (29-67)||(22330654-22330692)
chr7 (28-66)||(29763830-29763868)
chr7 (12-66)||(31982057-31982111)
chr7 (12-70)||(33881722-33881780)
chr7 (28-70)||(37173007-37173049)
chr7 (29-67)||(37352013-37352051)
chr7 (36-66)||(40842405-40842435)
chr7 (12-66)||(45607024-45607078)
chr7 (28-69)||(10700219-10700260)
chr7 (13-66)||(28109957-28110010)
chr7 (12-69)||(30941175-30941232)
chr7 (13-66)||(39369302-39369355)
chr7 (18-67)||(41966331-41966380)
chr7 (12-68)||(23761057-23761113)
chr7 (12-68)||(27164854-27164910)
chr7 (27-67)||(31274561-31274601)
chr7 (28-68)||(37899321-37899361)
[»] chr4 (52 HSPs)
chr4 (82-244)||(882644-882809)
chr4 (12-67)||(6953405-6953460)
chr4 (12-66)||(23347775-23347829)
chr4 (12-66)||(31240648-31240702)
chr4 (12-66)||(52392242-52392296)
chr4 (27-67)||(51318702-51318742)
chr4 (12-67)||(36444412-36444467)
chr4 (12-67)||(36792331-36792386)
chr4 (28-67)||(46566928-46566967)
chr4 (28-67)||(54800997-54801036)
chr4 (12-66)||(1031755-1031809)
chr4 (13-67)||(4896518-4896572)
chr4 (12-66)||(19720658-19720712)
chr4 (12-70)||(31804346-31804404)
chr4 (12-66)||(35332706-35332760)
chr4 (27-68)||(34116572-34116613)
chr4 (12-67)||(14010134-14010190)
chr4 (12-68)||(47998592-47998648)
chr4 (18-66)||(50158995-50159043)
chr4 (12-67)||(11012140-11012195)
chr4 (27-66)||(11064121-11064160)
chr4 (12-63)||(12694445-12694496)
chr4 (19-66)||(26885291-26885338)
chr4 (29-68)||(41119504-41119543)
chr4 (14-65)||(45548803-45548854)
chr4 (29-67)||(5234494-5234532)
chr4 (12-66)||(23220335-23220389)
chr4 (29-67)||(46173549-46173587)
chr4 (12-66)||(46794518-46794572)
chr4 (12-66)||(51039133-51039187)
chr4 (29-66)||(11997685-11997722)
chr4 (27-68)||(30973595-30973636)
chr4 (12-69)||(34259812-34259869)
chr4 (12-69)||(35017150-35017207)
chr4 (29-66)||(37547065-37547102)
chr4 (12-69)||(45277098-45277155)
chr4 (28-69)||(51359823-51359864)
chr4 (18-67)||(51717305-51717354)
chr4 (29-62)||(52487165-52487198)
chr4 (28-69)||(52669642-52669683)
chr4 (28-68)||(1796364-1796404)
chr4 (30-66)||(6370980-6371016)
chr4 (28-72)||(14527638-14527682)
chr4 (30-66)||(15596396-15596432)
chr4 (36-68)||(26440674-26440706)
chr4 (36-68)||(40409207-40409239)
chr4 (12-68)||(42915236-42915292)
chr4 (28-68)||(45521612-45521652)
chr4 (12-68)||(47014937-47014993)
chr4 (27-63)||(48326555-48326591)
chr4 (28-68)||(51377326-51377366)
chr4 (28-68)||(55268034-55268074)
[»] chr3 (49 HSPs)
chr3 (12-66)||(9027873-9027927)
chr3 (12-66)||(14957836-14957890)
chr3 (27-68)||(24537217-24537258)
chr3 (13-70)||(34271508-34271565)
chr3 (12-68)||(28300665-28300721)
chr3 (18-66)||(51672863-51672911)
chr3 (12-67)||(47773992-47774047)
chr3 (12-66)||(2482691-2482745)
chr3 (30-68)||(7294135-7294173)
chr3 (28-70)||(43409395-43409437)
chr3 (12-66)||(51464289-51464343)
chr3 (12-69)||(30796631-30796688)
chr3 (27-67)||(18169156-18169196)
chr3 (12-68)||(41877628-41877684)
chr3 (12-76)||(44334818-44334882)
chr3 (12-72)||(49031559-49031619)
chr3 (12-67)||(108430-108485)
chr3 (28-67)||(1901959-1901998)
chr3 (28-67)||(1911405-1911444)
chr3 (12-63)||(14207378-14207429)
chr3 (12-63)||(14215126-14215177)
chr3 (12-67)||(26279883-26279938)
chr3 (12-67)||(29800566-29800621)
chr3 (28-71)||(31176473-31176516)
chr3 (18-69)||(34733314-34733365)
chr3 (18-65)||(42104466-42104513)
chr3 (28-67)||(43499594-43499633)
chr3 (12-67)||(46473127-46473182)
chr3 (12-67)||(48945846-48945901)
chr3 (12-67)||(53473609-53473664)
chr3 (12-66)||(1295332-1295386)
chr3 (28-66)||(3347155-3347193)
chr3 (13-67)||(5398917-5398971)
chr3 (18-68)||(11173456-11173506)
chr3 (12-66)||(20380906-20380960)
chr3 (13-67)||(22813071-22813125)
chr3 (22-68)||(46315982-46316028)
chr3 (18-67)||(35272026-35272075)
chr3 (18-67)||(47849671-47849720)
chr3 (30-67)||(55344331-55344368)
chr3 (11-67)||(18181442-18181498)
chr3 (36-68)||(34607961-34607993)
chr3 (28-72)||(38944174-38944218)
chr3 (27-67)||(43169774-43169814)
chr3 (28-68)||(44910695-44910735)
chr3 (40-68)||(46003703-46003731)
chr3 (12-67)||(48405409-48405465)
chr3 (28-68)||(50207003-50207043)
chr3 (28-72)||(50294145-50294189)
[»] chr8 (34 HSPs)
chr8 (16-69)||(7279976-7280029)
chr8 (12-67)||(13267103-13267158)
chr8 (12-67)||(28927680-28927735)
chr8 (12-66)||(43290882-43290936)
chr8 (18-67)||(40842013-40842062)
chr8 (12-67)||(22852856-22852911)
chr8 (12-67)||(45101395-45101450)
chr8 (12-70)||(3650109-3650167)
chr8 (11-65)||(39719264-39719318)
chr8 (12-67)||(12655921-12655977)
chr8 (12-64)||(21648948-21649000)
chr8 (27-67)||(39021475-39021515)
chr8 (29-68)||(5502369-5502408)
chr8 (12-67)||(11223876-11223931)
chr8 (12-67)||(11879507-11879562)
chr8 (12-67)||(11896923-11896978)
chr8 (28-67)||(32725813-32725852)
chr8 (12-66)||(11114686-11114740)
chr8 (12-66)||(32174954-32175008)
chr8 (12-70)||(35633986-35634044)
chr8 (12-69)||(1158352-1158409)
chr8 (29-66)||(1796496-1796533)
chr8 (29-66)||(12732842-12732879)
chr8 (27-68)||(27836178-27836219)
chr8 (22-67)||(38128803-38128848)
chr8 (13-66)||(38844808-38844861)
chr8 (28-68)||(3946238-3946278)
chr8 (27-67)||(5740806-5740846)
chr8 (27-67)||(8841029-8841069)
chr8 (18-66)||(28623134-28623182)
chr8 (12-68)||(40102021-40102077)
chr8 (18-66)||(42543502-42543549)
chr8 (44-72)||(42620026-42620054)
chr8 (12-72)||(44380631-44380691)
[»] chr1 (38 HSPs)
chr1 (18-67)||(35846342-35846391)
chr1 (12-66)||(45740561-45740615)
chr1 (18-67)||(25302666-25302715)
chr1 (12-67)||(11097901-11097956)
chr1 (12-67)||(50226896-50226951)
chr1 (29-67)||(31480142-31480180)
chr1 (28-70)||(34040533-34040575)
chr1 (28-69)||(32873338-32873379)
chr1 (12-65)||(32966268-32966321)
chr1 (29-74)||(49241527-49241572)
chr1 (26-66)||(20288371-20288411)
chr1 (28-72)||(26501289-26501333)
chr1 (28-68)||(49425736-49425776)
chr1 (27-67)||(50062006-50062046)
chr1 (12-67)||(366656-366711)
chr1 (12-67)||(586898-586953)
chr1 (12-67)||(7078517-7078572)
chr1 (12-67)||(26585190-26585245)
chr1 (28-67)||(27352629-27352668)
chr1 (11-66)||(34002336-34002391)
chr1 (28-71)||(45333351-45333394)
chr1 (29-67)||(15466757-15466795)
chr1 (29-67)||(29489393-29489431)
chr1 (12-66)||(30530416-30530470)
chr1 (12-66)||(31184281-31184335)
chr1 (28-66)||(32821635-32821673)
chr1 (12-70)||(33675896-33675954)
chr1 (29-67)||(49453490-49453528)
chr1 (12-70)||(51168785-51168843)
chr1 (28-65)||(1523327-1523364)
chr1 (18-67)||(1615035-1615084)
chr1 (36-69)||(31427998-31428031)
chr1 (30-66)||(5309075-5309111)
chr1 (28-68)||(17167847-17167887)
chr1 (18-65)||(22389548-22389596)
chr1 (28-68)||(43457852-43457892)
chr1 (18-66)||(49699775-49699823)
chr1 (13-73)||(51172323-51172383)
[»] chr5 (36 HSPs)
chr5 (12-72)||(18449255-18449315)
chr5 (12-67)||(10232498-10232553)
chr5 (12-67)||(19376149-19376204)
chr5 (18-72)||(125086-125140)
chr5 (12-66)||(12661964-12662018)
chr5 (12-66)||(34381012-34381066)
chr5 (12-66)||(39595272-39595326)
chr5 (12-66)||(42699057-42699111)
chr5 (30-67)||(11768025-11768062)
chr5 (12-64)||(12910786-12910838)
chr5 (28-64)||(36624320-36624356)
chr5 (12-68)||(36713195-36713251)
chr5 (12-67)||(1774300-1774355)
chr5 (29-68)||(6865810-6865849)
chr5 (12-67)||(7144576-7144631)
chr5 (28-67)||(8675466-8675505)
chr5 (12-67)||(26660428-26660483)
chr5 (12-67)||(26932020-26932075)
chr5 (28-67)||(28811428-28811467)
chr5 (29-68)||(35814451-35814490)
chr5 (12-66)||(12718397-12718451)
chr5 (12-66)||(12779623-12779677)
chr5 (28-70)||(30640786-30640828)
chr5 (29-75)||(31683518-31683564)
chr5 (28-66)||(36581498-36581536)
chr5 (12-66)||(40223802-40223856)
chr5 (28-69)||(8920075-8920116)
chr5 (12-73)||(22402643-22402704)
chr5 (30-67)||(23991169-23991206)
chr5 (27-68)||(41383386-41383427)
chr5 (28-68)||(189736-189776)
chr5 (18-66)||(7077365-7077413)
chr5 (28-68)||(9594476-9594516)
chr5 (12-68)||(14323985-14324041)
chr5 (30-66)||(19127124-19127160)
chr5 (28-68)||(43057433-43057473)
[»] scaffold0026 (1 HSPs)
scaffold0026 (13-66)||(113625-113678)
[»] scaffold0003 (2 HSPs)
scaffold0003 (12-72)||(337112-337172)
scaffold0003 (28-67)||(88807-88846)
[»] scaffold0011 (2 HSPs)
scaffold0011 (18-67)||(219687-219736)
scaffold0011 (28-66)||(18595-18633)
[»] chr6 (16 HSPs)
chr6 (18-63)||(29172993-29173038)
chr6 (28-68)||(8173345-8173385)
chr6 (12-68)||(9954546-9954602)
chr6 (12-68)||(10521124-10521180)
chr6 (12-70)||(3610977-3611036)
chr6 (12-67)||(29383556-29383611)
chr6 (27-66)||(32457284-32457323)
chr6 (12-66)||(18792449-18792503)
chr6 (28-65)||(6435037-6435074)
chr6 (18-67)||(11635616-11635665)
chr6 (18-67)||(15666796-15666845)
chr6 (18-67)||(30796098-30796147)
chr6 (28-68)||(4820249-4820289)
chr6 (18-66)||(29376738-29376786)
chr6 (27-67)||(31517201-31517241)
chr6 (12-67)||(31883320-31883376)
[»] scaffold0018 (1 HSPs)
scaffold0018 (12-67)||(36001-36056)
[»] scaffold0511 (1 HSPs)
scaffold0511 (12-66)||(11638-11692)
[»] scaffold0154 (1 HSPs)
scaffold0154 (18-68)||(4313-4363)
[»] scaffold0131 (1 HSPs)
scaffold0131 (27-65)||(15566-15604)
[»] scaffold0504 (1 HSPs)
scaffold0504 (12-69)||(10752-10809)
[»] scaffold0662 (1 HSPs)
scaffold0662 (12-68)||(1076-1132)
[»] scaffold0508 (1 HSPs)
scaffold0508 (30-66)||(11571-11607)
[»] scaffold0009 (1 HSPs)
scaffold0009 (12-68)||(263712-263768)


Alignment Details
Target: chr2 (Bit Score: 121; Significance: 4e-62; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 67 - 251
Target Start/End: Original strand, 10393220 - 10393404
Alignment:
Q  67 tattatgttttggcatg---aggtagagaatatcatcaccaacatcactacaccctatgcacacatgattattaaaacataaagaaacnnnnnnntcaat 163  Q
    |||||||||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||       |||||    
T  10393220 tattatgttttggcatgttgaggtagagaatatcatcaccgacatcactacaccctatgcacacatgattattaaaacataaagaaac-aaaaaatcaat 10393318  T
Q  164 ccattggcgcaaagattgaagtatccagcaaattttcattggaaatcaactcaatagtgaaagaaaagaagcgattgattattgagat 251  Q
    ||||||  ||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10393319 ccattg--gcaaatattgaagtatccagcaaattttgattggaaatcaactaaatagtgaaagaaaagaagcgattgattattgagat 10393404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 5067663 - 5067718
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  5067663 agagagaaagttatcaaaaagttgtcacaaagtagatgtacaaatatcatttctct 5067718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 36435734 - 36435681
Alignment:
Q  13 gagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||| |||||| |||||||||| ||||||||||| |||||||||||||||||||    
T  36435734 gagagaaagttgttaaaaagttgtcacaaagtggttgtacaaatatcatttctc 36435681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 11229338 - 11229393
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| | || ||||| ||||||||||||||||||||||||||||||||    
T  11229338 agagagaaagttgtcaagaagttgtcacaaagtggatgtacaaatatcatttctct 11229393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 23880149 - 23880090
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctatta 71  Q
    ||||| |||||||| |||||||| | | ||||||| ||||||||||||||||||||||||    
T  23880149 agagagaaagttatcaaaaagttgtgagaaagtggttgtacaaatatcatttctctatta 23880090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 5455470 - 5455524
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | |||| ||| |||||||||||||||||||||||||||||||    
T  5455470 agagagaaagttgtcaaaaggttgtcacaaagtggatgtacaaatatcatttctc 5455524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 9449432 - 9449486
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| |||||||||||||| |||||| ||||||| ||||||||||||    
T  9449432 agagagaaagttgttaaaaagttatcaaaaagtgaatgtacatatatcatttctc 9449486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 13553185 - 13553143
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  13553185 aaaaattatcacaaagtggttgtacaaatatcatttctctatt 13553143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 546402 - 546459
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctat 69  Q
    ||||| |||||| |||||||||| | | ||||||| ||||||||||||||||||||||    
T  546402 agagagaaagttgttaaaaagttgtaataaagtggttgtacaaatatcatttctctat 546459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 4738604 - 4738644
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  4738604 aaaaagttgtcacaaagtggttgtacaaatatcatttctct 4738644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 33296103 - 33296143
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  33296103 aaaaagttgtcacaaagtggttgtacaaatatcatttctct 33296143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 34139070 - 34139110
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  34139070 aaaaaattatcacaaagtagatgtacaaatatcatttctct 34139110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 13711115 - 13711060
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| | | |||||||||| ||||||| ||||||||||||||||||||    
T  13711115 agagagaaagttgtcacaaagttatcaaaaagtggttgtacaaatatcatttctct 13711060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 14954616 - 14954671
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| || ||||||| ||||||| || |||||||||||||||||||||    
T  14954616 agagagaaagttgttcaaaagttgtcacaaaatgtatgtacaaatatcatttctct 14954671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 18508116 - 18508077
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||||||||| ||| ||||||||||||||||||||||||    
T  18508116 aaaagttatcataaaatggatgtacaaatatcatttctct 18508077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 22966824 - 22966785
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  22966824 aaaagttatcaaaaagtggttgtacaaatatcatttctct 22966785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 39247495 - 39247534
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  39247495 aaaaagttatcacaaaatggttgtacaaatatcatttctc 39247534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 6884948 - 6884906
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    ||||||||||||||| | | |||||||||||||||||||||||    
T  6884948 aaaagttatcacaaattagttgtacaaatatcatttctctatt 6884906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 10288204 - 10288146
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    |||||||||||| |  |||| |||||||||| | | |||||||||||||||||||||||    
T  10288204 agagaaaaagttgtctaaaaattatcacaaaatagttgtacaaatatcatttctctatt 10288146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 12600102 - 12600048
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | | ||| |||||||||||||| |||||||||||||||||||    
T  12600102 agagagaaagttgtcacaaaattatcacaaagtggttgtacaaatatcatttctc 12600048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 26321729 - 26321767
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttct 65  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  26321729 aaaaagttatcacaaaatggttgtacaaatatcatttct 26321767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 26321897 - 26321935
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttct 65  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  26321897 aaaaagttatcacaaaatggttgtacaaatatcatttct 26321935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 30856845 - 30856807
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  30856845 aaaagttgtcacaaagtggttgtacaaatatcatttctc 30856807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 35589420 - 35589462
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||    
T  35589420 aaaagttgtcacaaaatggatgttcaaatatcatttctctatt 35589462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 39449150 - 39449192
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||    
T  39449150 aaaagttgtcacaaaatggatgttcaaatatcatttctctatt 39449192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 6365225 - 6365184
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||| || ||||||||||| |||||||||||||||||||||    
T  6365225 aaaaaattgtcacaaagtggttgtacaaatatcatttctcta 6365184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 36909876 - 36909917
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctat 69  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||    
T  36909876 aaaagttgtcacaaaatggttgtacaaatatcatttctctat 36909917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 37966406 - 37966365
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    |||||||| ||||||| ||| |||||||||||||||||||||    
T  37966406 aaaaagttgtcacaaattggttgtacaaatatcatttctcta 37966365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 1889201 - 1889141
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctattat 72  Q
    ||||| |||||| | ||||| || ||| ||||||| |||||||||||||||||||| ||||    
T  1889201 agagagaaagttgtcaaaaaattgtcagaaagtggttgtacaaatatcatttctcttttat 1889141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 5167774 - 5167814
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| || ||||||||||| ||||||||||||||||||||    
T  5167774 aaaaaattgtcacaaagtggttgtacaaatatcatttctct 5167814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 34442152 - 34442112
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| ||||||| ||||||||||||||||||||    
T  34442152 aaaaaattatcataaagtggttgtacaaatatcatttctct 34442112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 67
Target Start/End: Original strand, 42283275 - 42283311
Alignment:
Q  31 agttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  42283275 agttgtcacaaagtggttgtacaaatatcatttctct 42283311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 44189866 - 44189826
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||| ||| ||||||| ||||||||||||||||||||    
T  44189866 aaaaagttgtcataaagtggttgtacaaatatcatttctct 44189826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 7e-27; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 82 - 244
Target Start/End: Complemental strand, 3788420 - 3788261
Alignment:
Q  82 tgaggtagagaatatcatcaccaacatcactacaccctatgcacacatgattattaaaacataaagaaacnnnnnnntcaatccattggcgcaaagattg 181  Q
    |||||||||||||||||||||||| | ||| | ||||| | |||||||||||||||||| ||||| ||||       |||||||||||||  |||||| |    
T  3788420 tgaggtagagaatatcatcaccaagaccaccataccctgttcacacatgattattaaaatataaacaaacaaaaaa-tcaatccattggc--aaagatag 3788324  T
Q  182 aagtatccagcaaattttcattggaaatcaactcaatagtgaaagaaaagaagcgattgatta 244  Q
    ||||||||| | |||| | |||| ||||||||| |||||||||||||||||||| ||||||||    
T  3788323 aagtatccaaccaattctgattgcaaatcaactaaatagtgaaagaaaagaagcaattgatta 3788261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 25887631 - 25887591
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctctat 69  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  25887631 aaagttgtcacaaagtggatgtacaaatatcatttctctat 25887591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 40717259 - 40717307
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||||||||||||||| ||| ||||||||||||||| |||||||||||    
T  40717259 aaagttattaaaaagttgtcataaagtggatgtacaagtatcatttctc 40717307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 12141953 - 12141898
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||||||| || ||||||||||||||| ||| ||||||||||| ||||||||    
T  12141953 agagaaaaagttgttcaaaagttatcacaaaatggttgtacaaatatgatttctct 12141898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 156017 - 156059
Alignment:
Q  30 aagttatcacaaagtggatgtacaaatatcatttctctattat 72  Q
    ||||| |||||||||||||||||||||||||||||||| ||||    
T  156017 aagttgtcacaaagtggatgtacaaatatcatttctcttttat 156059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 7807109 - 7807055
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||||||||| | ||||| |||||||||| ||| |||||||||||||||||||    
T  7807109 agagaaaaagttgtaaaaaatttatcacaaaatgggtgtacaaatatcatttctc 7807055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 13437252 - 13437194
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    |||||||||||| || ||||||| ||||||| ||| ||| |||||||||||||||||||    
T  13437252 agagaaaaagttgttcaaaagttgtcacaaaatggttgtgcaaatatcatttctctatt 13437194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 19426634 - 19426576
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    ||||| |||||| | |||||||| ||||||| ||| |||||||||||||||||||||||    
T  19426634 agagagaaagttgtcaaaaagttgtcacaaaatggttgtacaaatatcatttctctatt 19426576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 43079665 - 43079707
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  43079665 aaaaattatcacaaagtggttgtacaaatatcatttctctatt 43079707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 44894505 - 44894546
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    |||||||||||| ||| |||||||||||||||||||||||||    
T  44894505 aaaaagttatcataaaatggatgtacaaatatcatttctcta 44894546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 48866948 - 48867001
Alignment:
Q  13 gagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||| |||||| | |||||||| ||||||||||| |||||||||||||||||||    
T  48866948 gagagaaagttgtcaaaaagttgtcacaaagtggctgtacaaatatcatttctc 48867001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 25614854 - 25614898
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctattat 72  Q
    ||||||||||| ||| ||||||||||||||||||||||| |||||    
T  25614854 aaaagttatcaaaaaatggatgtacaaatatcatttctcaattat 25614898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 28596960 - 28596908
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttc 64  Q
    ||||| |||||| | |||||||| ||||||||||| |||||||||||||||||    
T  28596960 agagagaaagttgtaaaaaagttgtcacaaagtggttgtacaaatatcatttc 28596908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 28824557 - 28824502
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| | |||||||| ||| ||||||| ||||||||||||||||||||    
T  28824557 agagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctct 28824502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 38023457 - 38023496
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  38023457 aaaaattatcacaaagtggttgtacaaatatcatttctct 38023496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 42663123 - 42663084
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  42663123 aaaaagttgtcacaaaatggatgtacaaatatcatttctc 42663084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 2469740 - 2469702
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  2469740 aaagttgtcacaaagtggttgtacaaatatcatttctct 2469702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 17500751 - 17500697
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | |||||||||| | ||||||| |||||||||||||||||||    
T  17500751 agagataaagttgtcaaaaagttataataaagtggttgtacaaatatcatttctc 17500697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 17552463 - 17552517
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | |||||||||| | ||||||| |||||||||||||||||||    
T  17552463 agagataaagttgtcaaaaagttataataaagtggttgtacaaatatcatttctc 17552517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 22330654 - 22330692
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  22330654 aaagttgtcacaaagtggttgtacaaatatcatttctct 22330692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 29763868 - 29763830
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  29763868 aaaagttatcacaaaatggttgtacaaatatcatttctc 29763830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 31982111 - 31982057
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||| ||||||||| ||||  || ||||||||||| |||||||||||||||||||    
T  31982111 agagcaaaagttatcaaaagattgtcacaaagtggttgtacaaatatcatttctc 31982057  T

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Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 33881722 - 33881780
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    ||||| |||||||| ||||||||||  |||| ||| |||| ||||||||||||||||||    
T  33881722 agagagaaagttatcaaaaagttataccaaaatggttgtataaatatcatttctctatt 33881780  T

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Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 37173007 - 37173049
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    ||||||||||||||| ||| |||||||||||||||||| ||||    
T  37173007 aaaagttatcacaaattggttgtacaaatatcatttctttatt 37173049  T

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Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 37352013 - 37352051
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  37352013 aaagttgtcacaaagtggttgtacaaatatcatttctct 37352051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Complemental strand, 40842435 - 40842405
Alignment:
Q  36 tcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||||||||||||||||||||||||||||    
T  40842435 tcacaaagtggatgtacaaatatcatttctc 40842405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 45607078 - 45607024
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | || ||||| ||||||||| |||||||||||||||||||||    
T  45607078 agagagaaagttgtcaagaagttgtcacaaagtagatgtacaaatatcatttctc 45607024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 10700219 - 10700260
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctat 69  Q
    ||||||||||| ||||||| ||| ||||||||||||||||||    
T  10700219 aaaagttatcaaaaagtggttgtgcaaatatcatttctctat 10700260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 28110010 - 28109957
Alignment:
Q  13 gagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||| |||||| || ||||||| ||| ||||||| |||||||||||||||||||    
T  28110010 gagataaagttgtttaaaagttgtcaaaaagtggttgtacaaatatcatttctc 28109957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 30941232 - 30941175
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctat 69  Q
    ||||| ||||||||  |||| || | ||||||||| ||||||||||||||||||||||    
T  30941232 agagagaaagttatctaaaaattgttacaaagtggttgtacaaatatcatttctctat 30941175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 39369355 - 39369302
Alignment:
Q  13 gagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||||||||||| |||||||| | |||||  || |||||||||||||||||||    
T  39369355 gagaaaaagttatcaaaaagttgttacaaaagggttgtacaaatatcatttctc 39369302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 41966380 - 41966331
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||| | ||||| || ||||||||||| ||||||||||||||||||||    
T  41966380 aaagttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttctct 41966331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 23761113 - 23761057
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||| |||||| | |||||||||||| ||| | |||||||| ||||||||||||||    
T  23761113 agagagaaagttgtcaaaaagttatcaaaaaatcgatgtacatatatcatttctcta 23761057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 27164854 - 27164910
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||| ||||||||  ||||||| ||||||| ||  |||||||||||||||||||||    
T  27164854 agagagaaagttatacaaaagttgtcacaaattgattgtacaaatatcatttctcta 27164910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 31274561 - 31274601
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||| ||||||| ||| ||||||||||||||||||||    
T  31274561 aaaaagttgtcacaaattggttgtacaaatatcatttctct 31274601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 37899361 - 37899321
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||||| ||||||| ||||||| |||||||||||||||||    
T  37899361 aaaagttgtcacaaaatggatgttcaaatatcatttctcta 37899321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 82 - 244
Target Start/End: Original strand, 882644 - 882809
Alignment:
Q  82 tgaggtagagaatatcatcaccaacatcactac------accctatgcacacatgattattaaaacataaagaaacnnnnnnntcaatccattggcgcaa 175  Q
    |||||||||||||||||||||||||| ||| ||      ||||| | |||||||||||||||||||||||| ||||       | |||||||||||  ||    
T  882644 tgaggtagagaatatcatcaccaacaccaccaccaccataccctgttcacacatgattattaaaacataaacaaacaaaaaatt-aatccattggc--aa 882740  T
Q  176 agattgaagtatccagcaaattttcattggaaatcaactcaatagtgaaagaaaagaagcgattgatta 244  Q
    || | |||||||||| | |||| | |||| ||||||||| |||||||||||||||||||| ||||||||    
T  882741 aggtagaagtatccaaccaattatgattgcaaatcaactaaatagtgaaagaaaagaagcaattgatta 882809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 6953405 - 6953460
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  6953405 agagataaagttgttaaaaagttgtcacaaagtggatgtacaaatatcatttctct 6953460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 23347829 - 23347775
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| ||| || |||||||||| |||||||||||||||||||||||||||||||    
T  23347829 agagagaaaattgttaaaaagttgtcacaaagtggatgtacaaatatcatttctc 23347775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 31240702 - 31240648
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | |||||||||||||||||||| |||||||||||||||||||    
T  31240702 agagagaaagttgtaaaaaagttatcacaaagtggttgtacaaatatcatttctc 31240648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 52392242 - 52392296
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | |||||||| |||||||||||||||||||||||||||||||    
T  52392242 agagataaagttgtcaaaaagttgtcacaaagtggatgtacaaatatcatttctc 52392296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 51318742 - 51318702
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  51318742 aaaaagttatcacaaagtggttgtacaaatatcatttctct 51318702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 36444412 - 36444467
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| |||||||||||||| ||| ||| ||||||||||||||||||||    
T  36444412 agagagaaagttgttaaaaagttatcataaaatggttgtacaaatatcatttctct 36444467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 36792386 - 36792331
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||||||| | |||||||| | | ||||||||||||||||||||||||||||    
T  36792386 agagaaaaagttgtaaaaaagttgttataaagtggatgtacaaatatcatttctct 36792331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 46566967 - 46566928
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  46566967 aaaagttgtcacaaagtggatgtacaaatatcatttctct 46566928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 54801036 - 54800997
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  54801036 aaaagttatcacaaagtggttgtacaaatatcatttctct 54800997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 1031809 - 1031755
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | || ||||||||||||||||| |||||||||||||||||||    
T  1031809 agagagaaagttgtcaagaagttatcacaaagtggttgtacaaatatcatttctc 1031755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 4896518 - 4896572
Alignment:
Q  13 gagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||| |||||| | |||||||| ||||||||||| ||||||||||||||||||||    
T  4896518 gagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctct 4896572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 19720658 - 19720712
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| ||||||||| ||||||| ||||||| ||||||| |||||||||||||||    
T  19720658 agagagaaagttattcaaaagttgtcacaaaatggatgtgcaaatatcatttctc 19720712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 31804346 - 31804404
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    ||||| ||| |||| ||||| |||||||||||||  |||||||||||||||||||||||    
T  31804346 agagagaaaattatcaaaaaattatcacaaagtgattgtacaaatatcatttctctatt 31804404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 35332760 - 35332706
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||||| ||||| |||||| ||||||| |||||||||||||||||||    
T  35332760 agagagaaagttatcaaaaaattatcataaagtggttgtacaaatatcatttctc 35332706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 34116572 - 34116613
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  34116572 aaaaagttgtcacaaagtggttgtacaaatatcatttctcta 34116613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 14010134 - 14010190
Alignment:
Q  12 agagaaaaagttatta-aaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||||||||||  ||||||| ||||||| ||||||| ||||||||||||||||    
T  14010134 agagaaaaagttattgtaaaagttgtcacaaaatggatgttcaaatatcatttctct 14010190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 47998648 - 47998592
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    |||||||||||| | |||||||| | ||||| ||| |||||||||||||||||||||    
T  47998648 agagaaaaagttgtcaaaaagttgttacaaaatggttgtacaaatatcatttctcta 47998592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 50159043 - 50158995
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||| |||||||||| ||| |||||||||||||| ||||||||||||    
T  50159043 aaagttgttaaaaagttgtcaaaaagtggatgtacatatatcatttctc 50158995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 11012195 - 11012140
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| |||||||||| ||| ||| ||| ||||||||||||||||||||    
T  11012195 agagataaagttgttaaaaagttgtcataaaatggttgtacaaatatcatttctct 11012140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 11064121 - 11064160
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  11064121 aaaaagttgtcacaaagtggttgtacaaatatcatttctc 11064160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 12694445 - 12694496
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcattt 63  Q
    ||||| |||||||| |||||||| ||||||| ||| ||||||||||||||||    
T  12694445 agagagaaagttatcaaaaagttgtcacaaaatggttgtacaaatatcattt 12694496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 26885338 - 26885291
Alignment:
Q  19 aagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||||  ||||||| ||||||||||| |||||||||||||||||||    
T  26885338 aagttatctaaaagttgtcacaaagtggttgtacaaatatcatttctc 26885291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 41119504 - 41119543
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  41119504 aaagttgtcacaaagtggttgtacaaatatcatttctcta 41119543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 45548803 - 45548854
Alignment:
Q  14 agaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttct 65  Q
    |||||||||| | ||||| |||||||||| ||| ||||||||||||||||||    
T  45548803 agaaaaagttgtcaaaaaattatcacaaaatggttgtacaaatatcatttct 45548854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 5234494 - 5234532
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  5234494 aaagttatcacaaagtgattgtacaaatatcatttctct 5234532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 23220389 - 23220335
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| ||||||||| ||||||| ||| ||| ||| |||||||||||||||||||    
T  23220389 agagataaagttatttaaaagttgtcaaaaaatggttgtacaaatatcatttctc 23220335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 46173587 - 46173549
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  46173587 aaagttgtcacaaagtggttgtacaaatatcatttctct 46173549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 46794518 - 46794572
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | |||||||| ||| ||||||| |||||||||||||||||||    
T  46794518 agagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctc 46794572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 51039133 - 51039187
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | |||||||| ||||||||| | |||||||||||||||||||    
T  51039133 agagataaagttgtcaaaaagttgtcacaaagtagttgtacaaatatcatttctc 51039187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 11997722 - 11997685
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  11997722 aaagttgtcacaaagtggttgtacaaatatcatttctc 11997685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 30973636 - 30973595
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    |||||||| ||| ||||||| |||||||||||||||||||||    
T  30973636 aaaaagttgtcataaagtggttgtacaaatatcatttctcta 30973595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 34259869 - 34259812
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctat 69  Q
    ||||| |||||| || || |||| ||||||| ||| ||||||||||||||||||||||    
T  34259869 agagagaaagttgttcaacagttgtcacaaaatggttgtacaaatatcatttctctat 34259812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 35017207 - 35017150
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctat 69  Q
    ||||| |||||| | |||||||| ||||||| | | ||||||||||||||||||||||    
T  35017207 agagataaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcatttctctat 35017150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 37547102 - 37547065
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  37547102 aaagttgtcacaaagtggttgtacaaatatcatttctc 37547065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 45277098 - 45277155
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctat 69  Q
    ||||| |||||| | |||||||| | | ||||||| ||||||||||||||||||||||    
T  45277098 agagagaaagttgtaaaaaagttgtgagaaagtggttgtacaaatatcatttctctat 45277155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 51359823 - 51359864
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctat 69  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||    
T  51359823 aaaagttgtcacaaaatggttgtacaaatatcatttctctat 51359864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 51717305 - 51717354
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||| || ||||| ||||||| ||| ||||||||||||||||||||    
T  51717305 aaagttatcaagaagttgtcacaaattggttgtacaaatatcatttctct 51717354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 52487198 - 52487165
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatt 62  Q
    |||||||||| |||||||||||||||||||||||    
T  52487198 aaagttatcataaagtggatgtacaaatatcatt 52487165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 52669642 - 52669683
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctat 69  Q
    ||||||||||||||| ||  ||||||||||||||||||||||    
T  52669642 aaaagttatcacaaattgtttgtacaaatatcatttctctat 52669683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 1796404 - 1796364
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||||| ||||||| ||| |||||||||||||||||||||    
T  1796404 aaaagttgtcacaaattggttgtacaaatatcatttctcta 1796364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 6371016 - 6370980
Alignment:
Q  30 aagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  6371016 aagttgtcacaaagtggttgtacaaatatcatttctc 6370980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 14527682 - 14527638
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctattat 72  Q
    ||||||| ||||||| ||||||| |||||||||||| ||||||||    
T  14527682 aaaagttgtcacaaaatggatgttcaaatatcatttttctattat 14527638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 15596432 - 15596396
Alignment:
Q  30 aagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  15596432 aagttgtcacaaagtggttgtacaaatatcatttctc 15596396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 26440706 - 26440674
Alignment:
Q  36 tcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||||||||| |||||||||||||||||||||    
T  26440706 tcacaaagtggttgtacaaatatcatttctcta 26440674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 40409207 - 40409239
Alignment:
Q  36 tcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||||||| |||||||||||||||||||||||    
T  40409207 tcacaaagtagatgtacaaatatcatttctcta 40409239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 42915236 - 42915292
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||| ||| |||||| |||||| ||| ||||||  |||||||||||||||||||||    
T  42915236 agagagaaatttattacaaagttgtcaaaaagtgattgtacaaatatcatttctcta 42915292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 45521612 - 45521652
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||||| ||| ||| |||||||||||||||||||||||||    
T  45521612 aaaagttgtcataaaatggatgtacaaatatcatttctcta 45521652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 47014993 - 47014937
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||| |||||| || ||||||| ||||||| | | |||||||||||||||||||||    
T  47014993 agagagaaagttgtttaaaagttgtcacaaaatagttgtacaaatatcatttctcta 47014937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 48326591 - 48326555
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcattt 63  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  48326591 aaaaagttgtcacaaagtggttgtacaaatatcattt 48326555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 51377326 - 51377366
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||||| ||||||| ||| |||||||||||||||||||||    
T  51377326 aaaagttgtcacaaattggttgtacaaatatcatttctcta 51377366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 55268034 - 55268074
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||||| ||||||| ||| |||||||||||||||||||||    
T  55268034 aaaagttgtcacaaattggttgtacaaatatcatttctcta 55268074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 9027927 - 9027873
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||    
T  9027927 agagagaaagttatcaaaaagttatcacaaagtggttgtacaaatatcatttctc 9027873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 14957890 - 14957836
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||||||| || |||||||||| ||||||||||| |||||||||||||||||||    
T  14957890 agagaaaaaattgttaaaaagttgtcacaaagtggttgtacaaatatcatttctc 14957836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 24537258 - 24537217
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  24537258 aaaaagttgtcacaaagtggatgtacaaatatcatttctcta 24537217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 34271508 - 34271565
Alignment:
Q  13 gagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    |||| |||||||| |||||||| | ||||||||| |||||||||||||||||||||||    
T  34271508 gagagaaagttatcaaaaagttgttacaaagtggttgtacaaatatcatttctctatt 34271565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 28300665 - 28300721
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||| |||||| |||||||||| ||| ||||||| |||||||||||||||||||||    
T  28300665 agagagaaagttgttaaaaagttgtcataaagtggttgtacaaatatcatttctcta 28300721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 51672911 - 51672863
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||| | |||||||||||||||||| |||||||||||||||||||||    
T  51672911 aaagttgtcaaaaagttatcacaaagtagatgtacaaatatcatttctc 51672863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 47773992 - 47774047
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| ||||||||  ||||||||||||||| || |||||||||||||||||||||    
T  47773992 agagataaagttatctaaaagttatcacaaaatgaatgtacaaatatcatttctct 47774047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 2482691 - 2482745
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| || ||||||| ||||||| |||||||||||||||||||||||    
T  2482691 agagagaaagttgttcaaaagttgtcacaaaatggatgtacaaatatcatttctc 2482745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 68
Target Start/End: Original strand, 7294135 - 7294173
Alignment:
Q  30 aagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  7294135 aagttgtcacaaagtggatgtacaaatatcatttctcta 7294173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 43409395 - 43409437
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  43409395 aaaaattatcacaaagtggttgtacaaatatcatttctctatt 43409437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 51464289 - 51464343
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | |||||||| ||||||||||| |||||||||||||||||||    
T  51464289 agagataaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 51464343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 30796631 - 30796688
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctat 69  Q
    |||||||||||| | || ||||| ||||||||||| ||| ||||||||||||||||||    
T  30796631 agagaaaaagttgtcaagaagttgtcacaaagtggttgtgcaaatatcatttctctat 30796688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 18169196 - 18169156
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  18169196 aaaaagttgtcacaaagtggttgtacaaatatcatttctct 18169156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 41877628 - 41877684
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    |||||||||||| | |||| | | ||||||||||| |||||||||||||||||||||    
T  41877628 agagaaaaagttgtcaaaagggtgtcacaaagtggttgtacaaatatcatttctcta 41877684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 44334818 - 44334882
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctattatgttt 76  Q
    ||||| |||||| | |||||||| | | ||||||| ||||||||||||||||||||||| |||||    
T  44334818 agagagaaagttgtcaaaaagttgtaataaagtggttgtacaaatatcatttctctattttgttt 44334882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 49031559 - 49031619
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctattat 72  Q
    |||||||||||| || |||||||||||| || ||  |||||||||||||||| ||||||||    
T  49031559 agagaaaaagttgtttaaaagttatcacgaaatgattgtacaaatatcatttttctattat 49031619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 108485 - 108430
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| | ||||| || ||||||||||| ||||||||||||||||||||    
T  108485 agagagaaagttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttctct 108430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 1901959 - 1901998
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  1901959 aaaagttgtcacaaagtggttgtacaaatatcatttctct 1901998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 1911405 - 1911444
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  1911405 aaaagttgtcacaaagtggttgtacaaatatcatttctct 1911444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 14207429 - 14207378
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcattt 63  Q
    ||||| |||||| | |||| ||||||||||||||| ||||||||||||||||    
T  14207429 agagagaaagttgtcaaaaggttatcacaaagtggttgtacaaatatcattt 14207378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 14215177 - 14215126
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcattt 63  Q
    ||||| |||||| | |||| ||||||||||||||| ||||||||||||||||    
T  14215177 agagagaaagttgtcaaaaggttatcacaaagtggttgtacaaatatcattt 14215126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 26279938 - 26279883
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| | |||||||| ||| ||||||| ||||||||||||||||||||    
T  26279938 agagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctct 26279883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 29800566 - 29800621
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||||||| |  |||| |||||||||||| | ||||||||||||||||||||    
T  29800566 agagaaaaagttgtctaaaaattatcacaaagtagttgtacaaatatcatttctct 29800621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 31176473 - 31176516
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctatta 71  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||    
T  31176473 aaaaattatcacaaagtggttgtacaaatatcatttctcaatta 31176516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 34733314 - 34733365
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctat 69  Q
    |||||| | |||||||| ||||||||||| |||||||||||||||| |||||    
T  34733314 aaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttatctat 34733365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 42104513 - 42104466
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttct 65  Q
    |||||| |||||||||| ||| |||||||||||||| |||||||||||    
T  42104513 aaagttgttaaaaagttgtcaaaaagtggatgtacatatatcatttct 42104466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 43499594 - 43499633
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  43499594 aaaagttatcataaagtggttgtacaaatatcatttctct 43499633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 46473182 - 46473127
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| ||| || |||||||||| || |||||||| ||||||||||||||||||||    
T  46473182 agagagaaaattgttaaaaagttgtcgcaaagtggttgtacaaatatcatttctct 46473127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 48945901 - 48945846
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||||||| || | || ||||| ||||||||||| ||||||||||||||||||||    
T  48945901 agagaaaaaattgtcaagaagttgtcacaaagtggttgtacaaatatcatttctct 48945846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 53473664 - 53473609
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||||||| |  ||||||||||||||| ||  ||||||||||||||||||||    
T  53473664 agagaaaaagttgtacaaaagttatcacaaattgattgtacaaatatcatttctct 53473609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 1295386 - 1295332
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||||||||| |  ||||||||||||||| | | |||||||||||||||||||    
T  1295386 agagaaaaagttgtccaaaagttatcacaaaatagttgtacaaatatcatttctc 1295332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 3347155 - 3347193
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  3347155 aaaagttatcacaaaatggatgttcaaatatcatttctc 3347193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 5398971 - 5398917
Alignment:
Q  13 gagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||| |||||| | ||||| || ||||||||||| ||||||||||||||||||||    
T  5398971 gagagaaagttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttctct 5398917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 11173506 - 11173456
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    |||||| | |||||||| ||||||||||| ||||||||||||| |||||||    
T  11173506 aaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcaattctcta 11173456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 20380906 - 20380960
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | || ||||| ||||||||||| |||||||||||||||||||    
T  20380906 agagagaaagttgtcaagaagttgtcacaaagtggttgtacaaatatcatttctc 20380960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 22813125 - 22813071
Alignment:
Q  13 gagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||| |||||| | |||||||| ||| ||||||| ||||||||||||||||||||    
T  22813125 gagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctct 22813071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 46315982 - 46316028
Alignment:
Q  22 ttattaaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    |||| |||||||| ||| ||||||| |||||||||||||||||||||    
T  46315982 ttatcaaaaagttgtcataaagtggttgtacaaatatcatttctcta 46316028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 35272075 - 35272026
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||| | |||| ||| ||||||||||| ||||||||||||||||||||    
T  35272075 aaagttgtcaaaaggttgtcacaaagtggttgtacaaatatcatttctct 35272026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 47849720 - 47849671
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||| | ||||| |||||||||| ||| ||||||||||||||||||||    
T  47849720 aaagttgtcaaaaaattatcacaaaatggttgtacaaatatcatttctct 47849671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 55344331 - 55344368
Alignment:
Q  30 aagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  55344331 aagttatcacaaaatggttgtacaaatatcatttctct 55344368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 18181498 - 18181442
Alignment:
Q  11 cagagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||| ||||||||||  ||||||||||  ||||||| |||| |||||||||||||||    
T  18181498 cagataaaaagttatctaaaagttatcgtaaagtggttgtagaaatatcatttctct 18181442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 34607961 - 34607993
Alignment:
Q  36 tcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||||||||| |||||||||||||||||||||    
T  34607961 tcacaaagtggttgtacaaatatcatttctcta 34607993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 38944174 - 38944218
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctattat 72  Q
    ||||||| ||||||| | | |||||||||||||||||||||||||    
T  38944174 aaaagttgtcacaaattagttgtacaaatatcatttctctattat 38944218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 43169774 - 43169814
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||| ||||||| ||| ||||||||||||||||||||    
T  43169774 aaaaagttgtcacaaaatggttgtacaaatatcatttctct 43169814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 44910735 - 44910695
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||||||||| ||| || ||||||||||||||||||||||    
T  44910735 aaaagttatcataaaatgaatgtacaaatatcatttctcta 44910695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 68
Target Start/End: Complemental strand, 46003731 - 46003703
Alignment:
Q  40 aaagtggatgtacaaatatcatttctcta 68  Q
    |||||||||||||||||||||||||||||    
T  46003731 aaagtggatgtacaaatatcatttctcta 46003703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 48405465 - 48405409
Alignment:
Q  12 agagaaaaagttatta-aaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| ||| ||||||| ||||||| ||| ||||||||||||||||||||    
T  48405465 agagagaaagttgttacaaaagttgtcacaaaatggttgtacaaatatcatttctct 48405409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 50207003 - 50207043
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||||| ||||||| ||||||| |||||||||||||||||    
T  50207003 aaaagttgtcacaaaatggatgttcaaatatcatttctcta 50207043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 50294145 - 50294189
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctattat 72  Q
    ||||||| || |||||||| ||||||||||||||||||| |||||    
T  50294145 aaaagttgtcgcaaagtggttgtacaaatatcatttctcaattat 50294189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 7279976 - 7280029
Alignment:
Q  16 aaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctat 69  Q
    |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||    
T  7279976 aaaaagttgttaaaatgttgtcacaaagtggatgtacaaatatcatttctctat 7280029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 13267103 - 13267158
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||||||| |||||||||| ||||||||||| || |||||||||||||||||    
T  13267103 agagaaaaagttgttaaaaagttgtcacaaagtggttgaacaaatatcatttctct 13267158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 28927735 - 28927680
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||||||| || |||||||||| ||||||||||| ||||||||||||||||||||    
T  28927735 agagaaaaaattgttaaaaagttgtcacaaagtggttgtacaaatatcatttctct 28927680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 43290882 - 43290936
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| ||| ||||||||||||| ||| |||||||||||||||||||||||||||    
T  43290882 agagagaaaattattaaaaagttgtcataaagtggatgtacaaatatcatttctc 43290936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 40842062 - 40842013
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||| | |||||||||||||||||||| ||||||||||||||||||||    
T  40842062 aaagttgtcaaaaagttatcacaaagtggttgtacaaatatcatttctct 40842013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 22852856 - 22852911
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||||||| | || ||||| ||||||||||| ||||||||||||||||||||    
T  22852856 agagaaaaagttgtcaagaagttgtcacaaagtggttgtacaaatatcatttctct 22852911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 45101450 - 45101395
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| | |||||||| ||||||||||| ||||||||||||||||||||    
T  45101450 agagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctct 45101395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 3650167 - 3650109
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    ||||| |||||| ||||||| |||| ||||| ||| |||||||||||||||||||||||    
T  3650167 agagagaaagttgttaaaaaattattacaaattggttgtacaaatatcatttctctatt 3650109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 39719264 - 39719318
Alignment:
Q  11 cagagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttct 65  Q
    ||||||||||||||| |||||||| ||||||| ||  ||||||||||||||||||    
T  39719264 cagagaaaaagttatcaaaaagttgtcacaaattgattgtacaaatatcatttct 39719318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 12655977 - 12655921
Alignment:
Q  12 agagaaaaagttatta-aaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||||||||||| ||||||||| | ||| ||| ||||||||||||||||||||    
T  12655977 agagaaaaagttattacaaaagttattataaaatggttgtacaaatatcatttctct 12655921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 21648948 - 21649000
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttc 64  Q
    ||||| |||||| |||||||||| ||||||| ||| |||||||||||||||||    
T  21648948 agagagaaagttgttaaaaagttgtcacaaattggttgtacaaatatcatttc 21649000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 39021475 - 39021515
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  39021475 aaaaagttatcacaaaatggttgtacaaatatcatttctct 39021515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 5502408 - 5502369
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  5502408 aaagttgtcacaaagtggttgtacaaatatcatttctcta 5502369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 11223876 - 11223931
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| | || ||||| ||||||| ||||||||||||||||||||||||    
T  11223876 agagagaaagttgtcaagaagttgtcacaaaatggatgtacaaatatcatttctct 11223931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 11879507 - 11879562
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| | |||||||| |||||||||||| ||||| |||||||||||||    
T  11879507 agagagaaagttgtcaaaaagttgtcacaaagtggacgtacatatatcatttctct 11879562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 11896923 - 11896978
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| | |||||||| |||||||||||| ||||| |||||||||||||    
T  11896923 agagagaaagttgtcaaaaagttgtcacaaagtggacgtacatatatcatttctct 11896978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 32725813 - 32725852
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  32725813 aaaaattatcacaaagtggttgtacaaatatcatttctct 32725852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 11114686 - 11114740
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | ||||||||||  |||| |||||||||||||||||||||||    
T  11114686 agagagaaagttgtcaaaaagttattgcaaaatggatgtacaaatatcatttctc 11114740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 32175008 - 32174954
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | ||||| || ||||||||||||||||| |||||||||||||    
T  32175008 agagagaaagttgtcaaaaaattgtcacaaagtggatgtacgaatatcatttctc 32174954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 35633986 - 35634044
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    ||||| |||||| | |||||||| ||| ||||||| |||| ||||||||||||||||||    
T  35633986 agagagaaagttgtcaaaaagttgtcagaaagtggttgtagaaatatcatttctctatt 35634044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 1158352 - 1158409
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctat 69  Q
    ||||| |||||| || ||||||||| | ||| ||| ||||||||||||||||||||||    
T  1158352 agagagaaagttgttcaaaagttattagaaattggttgtacaaatatcatttctctat 1158409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 1796533 - 1796496
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  1796533 aaagttgtcacaaagtggttgtacaaatatcatttctc 1796496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 12732879 - 12732842
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  12732879 aaagttgtcacaaagtggttgtacaaatatcatttctc 12732842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 27836219 - 27836178
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    |||||||| ||||||||||| |||||||||||||||| ||||    
T  27836219 aaaaagttgtcacaaagtggttgtacaaatatcatttatcta 27836178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 38128803 - 38128848
Alignment:
Q  22 ttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||||||||||| ||||||| ||| ||||||||| ||||||||||    
T  38128803 ttattaaaaagttgtcacaaaatggttgtacaaatgtcatttctct 38128848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 38844808 - 38844861
Alignment:
Q  13 gagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||| ||||||||  ||||||| ||||||| ||| |||||||||||||||||||    
T  38844808 gagagaaagttatctaaaagttgtcacaaaatggttgtacaaatatcatttctc 38844861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 3946278 - 3946238
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||||| ||||||| ||||||| |||||||||||||||||    
T  3946278 aaaagttgtcacaaaatggatgttcaaatatcatttctcta 3946238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 5740806 - 5740846
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||| ||| ||||||| ||||||||||||||||||||    
T  5740806 aaaaagttgtcaaaaagtggttgtacaaatatcatttctct 5740846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 8841069 - 8841029
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| || ||||||||||| ||||||||||||||||||||    
T  8841069 aaaaaattctcacaaagtggttgtacaaatatcatttctct 8841029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 28623134 - 28623182
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||| | |||||||||||||| | ||| |||||||||||||||||||    
T  28623134 aaagttgtcaaaaagttatcacataatggttgtacaaatatcatttctc 28623182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 40102077 - 40102021
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||| |||||| | |||||||| | | ||||||| |||||||||||||||||||||    
T  40102077 agagagaaagttgtcaaaaagttgtgaaaaagtggttgtacaaatatcatttctcta 40102021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 42543502 - 42543549
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||| | ||||||||||||||| |||| |||||||||||||||||||    
T  42543502 aaagttgtaaaaaagttatcacaa-gtggttgtacaaatatcatttctc 42543549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 72
Target Start/End: Original strand, 42620026 - 42620054
Alignment:
Q  44 tggatgtacaaatatcatttctctattat 72  Q
    |||||||||||||||||||||||||||||    
T  42620026 tggatgtacaaatatcatttctctattat 42620054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 44380631 - 44380691
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctattat 72  Q
    ||||| |||||| || ||| ||| ||||||| ||| |||||||||||||||||||| ||||    
T  44380631 agagagaaagttgtttaaaggttgtcacaaaatggttgtacaaatatcatttctcttttat 44380691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 35846342 - 35846391
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  35846342 aaagttattaaaaagttgtcacaaagtggatatacaaatatcatttctct 35846391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 45740561 - 45740615
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||||||| ||| |||||||| ||||||||||| |||||||||||||||||||    
T  45740561 agagaaaaagctatcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 45740615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 25302666 - 25302715
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  25302666 aaagttattaaaaggttgtcacaaagtggttgtacaaatatcatttctct 25302715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 11097901 - 11097956
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| || ||||||| ||||||| ||||||||||||||||||||||||    
T  11097901 agagagaaagttgttcaaaagttgtcacaaaatggatgtacaaatatcatttctct 11097956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 50226896 - 50226951
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| | |||||||| ||||||||||| ||||||||||||||||||||    
T  50226896 agagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctct 50226951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 31480142 - 31480180
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  31480142 aaagttatcacaaagtggatgtacatatatcatttctct 31480180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 34040533 - 34040575
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  34040533 aaaagttatcacaaaatggatgttcaaatatcatttctctatt 34040575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 32873379 - 32873338
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctat 69  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  32873379 aaaagttatcataaaatggatgtacaaatatcatttctctat 32873338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 32966321 - 32966268
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttct 65  Q
    ||||||||| ||||| |||| || ||||||||||| ||||||||||||||||||    
T  32966321 agagaaaaaattatttaaaaattgtcacaaagtggttgtacaaatatcatttct 32966268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 49241527 - 49241572
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctctattatgt 74  Q
    |||||| ||||||||||||||| ||||||||||||||||| |||||    
T  49241527 aaagttgtcacaaagtggatgttcaaatatcatttctctaatatgt 49241572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 20288371 - 20288411
Alignment:
Q  26 taaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  20288371 taaaaagttgtcacaaattggatgtacaaatatcatttctc 20288411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 26501333 - 26501289
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctattat 72  Q
    ||||||||| ||||| ||| |||||||||||||||||||||||||    
T  26501333 aaaagttattacaaaatggttgtacaaatatcatttctctattat 26501289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 49425776 - 49425736
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||||| ||||||||||| |||||||||||||||||||||    
T  49425776 aaaagttgtcacaaagtggttgtacaaatatcatttctcta 49425736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 50062006 - 50062046
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| ||||||||||||||||||||||||||||    
T  50062006 aaaaaattatcataaagtggatgtacaaatatcatttctct 50062046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 366711 - 366656
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| | |||||||||||| ||||||| |||| |||||||||||||||    
T  366711 agagagaaagttgtcaaaaagttatcagaaagtggttgtataaatatcatttctct 366656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 586953 - 586898
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||||||| |  |||| |||||||||||||  ||||||||||||||||||||    
T  586953 agagaaaaagttgtctaaaaattatcacaaagtgattgtacaaatatcatttctct 586898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 7078517 - 7078572
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| || ||||||| ||||||| | ||||||||||||||||||||||    
T  7078517 agagagaaagttgttcaaaagttgtcacaaaatagatgtacaaatatcatttctct 7078572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 26585190 - 26585245
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||||||| |  ||||||||||||||| | | ||||||||||||||||||||    
T  26585190 agagaaaaagttgtacaaaagttatcacaaaatagttgtacaaatatcatttctct 26585245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 27352668 - 27352629
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||||||||||||| ||| ||||||||||||||||||||    
T  27352668 aaaagttatcacaaaatggttgtacaaatatcatttctct 27352629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 34002336 - 34002391
Alignment:
Q  11 cagagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||| |||||| |||||||||| | | ||||||| |||||||||||||||||||    
T  34002336 cagagagaaagttgttaaaaagttgtaataaagtggttgtacaaatatcatttctc 34002391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 45333394 - 45333351
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctatta 71  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||    
T  45333394 aaaagttatcaaaaagtggttgtacaaatatcatttctcaatta 45333351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 15466795 - 15466757
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  15466795 aaagttgttacaaagtggatgtacaaatatcatttctct 15466757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 29489393 - 29489431
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||||||||| ||| ||||||||||||||||||||    
T  29489393 aaagttatcacaaaatggttgtacaaatatcatttctct 29489431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 30530416 - 30530470
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| |||||||||| | | ||||||| |||||||||||||||||||    
T  30530416 agagagaaagttgttaaaaagttgtaataaagtggttgtacaaatatcatttctc 30530470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 31184335 - 31184281
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| |||||||||| ||| ||| ||| |||||||||||||||||||    
T  31184335 agagataaagttgttaaaaagttgtcataaaatggttgtacaaatatcatttctc 31184281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 32821673 - 32821635
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  32821673 aaaagttgtcacaaagtggttgtacaaatatcatttctc 32821635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 33675954 - 33675896
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    ||||| |||||| ||| |||||| ||| ||||||| ||||||||| |||||||||||||    
T  33675954 agagagaaagttgttacaaagttgtcaaaaagtggttgtacaaatgtcatttctctatt 33675896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 49453528 - 49453490
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  49453528 aaagttgtcacaaagtggttgtacaaatatcatttctct 49453490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 51168785 - 51168843
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    |||||||||||| |  ||||||||||||||| ||  ||||||| |||||||||||||||    
T  51168785 agagaaaaagttgtctaaaagttatcacaaaatgattgtacaagtatcatttctctatt 51168843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 1523327 - 1523364
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttct 65  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  1523327 aaaagttatcaaaaagtggttgtacaaatatcatttct 1523364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 1615084 - 1615035
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||| |||||||||| | | ||||||| ||||||||||||||||||||    
T  1615084 aaagttgttaaaaagttgtgagaaagtggttgtacaaatatcatttctct 1615035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 69
Target Start/End: Original strand, 31427998 - 31428031
Alignment:
Q  36 tcacaaagtggatgtacaaatatcatttctctat 69  Q
    ||||||||||| ||||||||||||||||||||||    
T  31427998 tcacaaagtggttgtacaaatatcatttctctat 31428031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 5309075 - 5309111
Alignment:
Q  30 aagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  5309075 aagttgtcacaaagtggttgtacaaatatcatttctc 5309111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 17167887 - 17167847
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||||| ||| ||| |||||||||||||||||||||||||    
T  17167887 aaaagttgtcataaaatggatgtacaaatatcatttctcta 17167847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 22389548 - 22389596
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtgga-tgtacaaatatcatttct 65  Q
    |||||| |||||||||| |||||||||||| |||||| |||||||||||    
T  22389548 aaagttgttaaaaagttgtcacaaagtggattgtacatatatcatttct 22389596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 43457852 - 43457892
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    |||||||||| |||| ||| |||||||||||||||||||||    
T  43457852 aaaagttatcgcaaaatggttgtacaaatatcatttctcta 43457892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 49699775 - 49699823
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||| ||||||| |||||| ||| ||| |||||||||||||||||||    
T  49699775 aaagttgttaaaaaattatcataaaatggttgtacaaatatcatttctc 49699823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 51172323 - 51172383
Alignment:
Q  13 gagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctattatg 73  Q
    |||| |||||| || ||||||| |||| |||||| |||||||||||||||| |||| ||||    
T  51172323 gagagaaagttgtttaaaagttgtcacgaagtggttgtacaaatatcatttttctaatatg 51172383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 18449315 - 18449255
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctattat 72  Q
    ||||| |||||| |||||||||| |||||||||||||||||||||||||||| | ||||||    
T  18449315 agagagaaagttgttaaaaagttgtcacaaagtggatgtacaaatatcatttttgtattat 18449255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 10232553 - 10232498
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| | |||| ||||||||||||| ||||||||||||||||||||||    
T  10232553 agagagaaagttgtcaaaaggttatcacaaagttgatgtacaaatatcatttctct 10232498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 19376149 - 19376204
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||||| |||||||| ||| ||||||| ||||||||||||||||||||    
T  19376149 agagagaaagttatcaaaaagttgtcagaaagtggttgtacaaatatcatttctct 19376204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 125140 - 125086
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctattat 72  Q
    |||||||| |||||||| ||||||||| | |||||||||||||||||||| ||||    
T  125140 aaagttatcaaaaagttgtcacaaagtagttgtacaaatatcatttctcttttat 125086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 12661964 - 12662018
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | ||||| || |||||||||||||||||||||||||||||||    
T  12661964 agagagaaagttgtcaaaaaattgtcacaaagtggatgtacaaatatcatttctc 12662018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 34381066 - 34381012
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | |||||||| ||||||||||| |||||||||||||||||||    
T  34381066 agagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 34381012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 39595326 - 39595272
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | |||||||| ||||||||||| |||||||||||||||||||    
T  39595326 agagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctc 39595272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 42699111 - 42699057
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||||| |||||||| ||||||| ||| |||||||||||||||||||    
T  42699111 agagagaaagttatcaaaaagttgtcacaaaatggttgtacaaatatcatttctc 42699057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 11768025 - 11768062
Alignment:
Q  30 aagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  11768025 aagttgtcacaaagtggatgtacaaatatcatttctct 11768062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 12910838 - 12910786
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttc 64  Q
    ||||| ||| |||| |||||||| ||||||||||| |||||||||||||||||    
T  12910838 agagagaaaattatcaaaaagttgtcacaaagtggttgtacaaatatcatttc 12910786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 36624356 - 36624320
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttc 64  Q
    |||||||||||||||||| ||||||||||||||||||    
T  36624356 aaaagttatcacaaagtgaatgtacaaatatcatttc 36624320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 36713195 - 36713251
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||| |||||| | || ||||| ||||||||||| |||||||||||||||||||||    
T  36713195 agagagaaagttgtcaagaagttgtcacaaagtggttgtacaaatatcatttctcta 36713251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 1774300 - 1774355
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| | || ||||| ||||||||| ||||||||||||||||||||||    
T  1774300 agagagaaagttgtcaagaagttgtcacaaagtagatgtacaaatatcatttctct 1774355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 6865810 - 6865849
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  6865810 aaagttgtcacaaagtggttgtacaaatatcatttctcta 6865849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 7144631 - 7144576
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| || ||||||||||| ||| ||| ||||||||||||||||||||    
T  7144631 agagagaaagttgtttaaaagttatcataaaatggttgtacaaatatcatttctct 7144576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 8675466 - 8675505
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  8675466 aaaagttatcacaaaatggatgttcaaatatcatttctct 8675505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 26660428 - 26660483
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| | || ||||| ||||||| ||||||||||||||||||||||||    
T  26660428 agagagaaagttgtcaagaagttgtcacaaaatggatgtacaaatatcatttctct 26660483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 26932020 - 26932075
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| | || ||||| ||||||| ||||||||||||||||||||||||    
T  26932020 agagagaaagttgtcaagaagttgtcacaaaatggatgtacaaatatcatttctct 26932075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 28811467 - 28811428
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  28811467 aaaagttgtcacaaagtggttgtacaaatatcatttctct 28811428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 35814490 - 35814451
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  35814490 aaagttatcacaaaatggttgtacaaatatcatttctcta 35814451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 12718397 - 12718451
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | |||||||| ||||||| ||| |||||||||||||||||||    
T  12718397 agagataaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttctc 12718451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 12779623 - 12779677
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | |||||||| ||||||| ||| |||||||||||||||||||    
T  12779623 agagataaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttctc 12779677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 30640828 - 30640786
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    ||||||| ||||||| ||||||| |||||||||||||||||||    
T  30640828 aaaagttgtcacaaaatggatgttcaaatatcatttctctatt 30640786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 75
Target Start/End: Original strand, 31683518 - 31683564
Alignment:
Q  29 aaagttatcacaaagtggatgtacaaatatcatttctctattatgtt 75  Q
    |||||||||| ||||||| ||| ||||| ||||||||||||||||||    
T  31683518 aaagttatcaaaaagtggttgttcaaatgtcatttctctattatgtt 31683564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 36581498 - 36581536
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  36581498 aaaaattatcacaaagtggttgtacaaatatcatttctc 36581536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 40223802 - 40223856
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| | |||||||| ||||||||||| ||||||||||| |||||||    
T  40223802 agagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatataatttctc 40223856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 8920116 - 8920075
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctctat 69  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||    
T  8920116 aaaagttgtcacaaaatggatgttcaaatatcatttctctat 8920075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 22402643 - 22402704
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctattatg 73  Q
    |||||||| ||| || ||||||| ||||||| |  |||| ||||||||||||||||||||||    
T  22402643 agagaaaatgttgttcaaaagttgtcacaaaataaatgttcaaatatcatttctctattatg 22402704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 23991169 - 23991206
Alignment:
Q  30 aagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  23991169 aagttgtcacaaagtggttgtacaaatatcatttctct 23991206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 41383386 - 41383427
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    |||||||||||||||| ||| ||||||||||||| |||||||    
T  41383386 aaaaagttatcacaaaatggttgtacaaatatcagttctcta 41383427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 189736 - 189776
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||||||||| ||| ||||||| |||||||||||||||||    
T  189736 aaaagttatcataaaatggatgttcaaatatcatttctcta 189776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 7077365 - 7077413
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||||| |||||||| | ||||| ||| |||||||||||||||||||    
T  7077365 aaagttatcaaaaagttgtaacaaaatggttgtacaaatatcatttctc 7077413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 9594516 - 9594476
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||||| ||||||| ||| |||||||||||||||||||||    
T  9594516 aaaagttgtcacaaattggttgtacaaatatcatttctcta 9594476  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 14323985 - 14324041
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||| |||||| | || ||||| ||||||| ||||||| |||||||||||||||||    
T  14323985 agagagaaagttgtcaagaagttgtcacaaaatggatgtgcaaatatcatttctcta 14324041  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 19127160 - 19127124
Alignment:
Q  30 aagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  19127160 aagttgtcacaaagtggttgtacaaatatcatttctc 19127124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 43057473 - 43057433
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||||| ||| ||||||| |||||||||||||||||||||    
T  43057473 aaaagttgtcaaaaagtggttgtacaaatatcatttctcta 43057433  T

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Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 113678 - 113625
Alignment:
Q  13 gagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||| |||||| |||||||||| ||||||||||| |||||||||||||||||||    
T  113678 gagagaaagttgttaaaaagttgtcacaaagtggttgtacaaatatcatttctc 113625  T

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Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 337172 - 337112
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctattat 72  Q
    ||||| ||||||||| ||||||| ||| ||| ||| |||||||||||||||||||||||||    
T  337172 agagagaaagttattcaaaagttgtcagaaaatggttgtacaaatatcatttctctattat 337112  T

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Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 88846 - 88807
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||||||||||||| ||| ||||||||||||||||||||    
T  88846 aaaagttatcacaaattggttgtacaaatatcatttctct 88807  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 219687 - 219736
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||| | |||||||| ||||||||||| ||||||||||||||||||||    
T  219687 aaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttctct 219736  T

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Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 18633 - 18595
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  18633 aaaagttatcacaaattggttgtacaaatatcatttctc 18595  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 29173038 - 29172993
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcattt 63  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||    
T  29173038 aaagttattaaaaagttatcataaaatggttgtacaaatatcattt 29172993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 8173345 - 8173385
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  8173345 aaaagttatcacaaagtggttgcacaaatatcatttctcta 8173385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 9954602 - 9954546
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||| |||||| | |||||||| ||||||| ||| |||||||||||||||||||||    
T  9954602 agagagaaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttctcta 9954546  T

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Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 10521180 - 10521124
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||| ||| |||| ||||||||||||||||||   |||||||||||||||||||||    
T  10521180 agagataaaattatcaaaaagttatcacaaagtaattgtacaaatatcatttctcta 10521124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 3610977 - 3611036
Alignment:
Q  12 agagaaaaagttatta-aaaagttatcacaaagtggatgtacaaatatcatttctctatt 70  Q
    |||||||||||| ||  |||||||||||| || ||||||| |||||||||||||||||||    
T  3610977 agagaaaaagttgttgcaaaagttatcactaaatggatgttcaaatatcatttctctatt 3611036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 29383611 - 29383556
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| | |||||||| ||| ||||||| ||||||||||||||||||||    
T  29383611 agagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttctct 29383556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 32457284 - 32457323
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||||| ||||||||||| |||||||||||||||||||    
T  32457284 aaaaagttgtcacaaagtggttgtacaaatatcatttctc 32457323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 18792449 - 18792503
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| |||||||||| ||| |||||||||||| | ||||||||||||    
T  18792449 agagagaaagttgttaaaaagttgtcaaaaagtggatgtagatatatcatttctc 18792503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 6435074 - 6435037
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttct 65  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  6435074 aaaagttgtcacaaagtggttgtacaaatatcatttct 6435037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 11635665 - 11635616
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||||||||| |||||| ||| | | ||||||||||||||||||||    
T  11635665 aaagttattaaaaaattatcataaaattgttgtacaaatatcatttctct 11635616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 15666796 - 15666845
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||| |||||||||| ||| ||| ||| ||||||||||||||||||||    
T  15666796 aaagttgttaaaaagttgtcagaaaatggttgtacaaatatcatttctct 15666845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 30796098 - 30796147
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||| | ||||| || ||||||||||| ||||||||||||||||||||    
T  30796098 aaagttgtaaaaaaattgtcacaaagtggttgtacaaatatcatttctct 30796147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 4820289 - 4820249
Alignment:
Q  28 aaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    |||||||||||| || ||||||| |||||||||||||||||    
T  4820289 aaaagttatcactaaatggatgttcaaatatcatttctcta 4820249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 29376738 - 29376786
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    |||||| |||||||||| ||||||| ||| |||| ||||||||||||||    
T  29376738 aaagttgttaaaaagttgtcacaaaatggttgtaaaaatatcatttctc 29376786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 31517201 - 31517241
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||||||| ||| ||||||| ||||||||||||||||||||    
T  31517201 aaaaagttgtcaaaaagtggttgtacaaatatcatttctct 31517241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 31883320 - 31883376
Alignment:
Q  12 agagaaaaagttatta-aaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    |||| ||||||| ||| ||||||| ||| ||||||| ||||||||||||||||||||    
T  31883320 agaggaaaagttgttacaaaagttgtcaaaaagtggttgtacaaatatcatttctct 31883376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 36056 - 36001
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctct 67  Q
    ||||| |||||| | ||||| |||||||||||| | ||||||||||||||||||||    
T  36056 agagagaaagttgtcaaaaaattatcacaaagtagttgtacaaatatcatttctct 36001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 11692 - 11638
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| |||||| |||||||||| ||| |||||||||||| | ||||||||||||    
T  11692 agagagaaagttgttaaaaagttgtcaaaaagtggatgtagatatatcatttctc 11638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 4363 - 4313
Alignment:
Q  18 aaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    |||||| | |||||||||||| ||| ||| |||||||||||||||||||||    
T  4363 aaagttgtcaaaaagttatcataaaatggttgtacaaatatcatttctcta 4313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 15566 - 15604
Alignment:
Q  27 aaaaagttatcacaaagtggatgtacaaatatcatttct 65  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  15566 aaaaagttgtcacaaagtggttgtacaaatatcatttct 15604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 10752 - 10809
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctctat 69  Q
    |||||||||||| | ||||| || | | ||||||| ||||||||||||||||||||||    
T  10752 agagaaaaagttgtcaaaaaattgtaataaagtggttgtacaaatatcatttctctat 10809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 1132 - 1076
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||| |||||| || ||||||| ||||||| | | |||||||||||||||||||||    
T  1132 agagagaaagttgtttaaaagttgtcacaaaatagttgtacaaatatcatttctcta 1076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 11571 - 11607
Alignment:
Q  30 aagttatcacaaagtggatgtacaaatatcatttctc 66  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  11571 aagttgtcacaaagtagatgtacaaatatcatttctc 11607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 263712 - 263768
Alignment:
Q  12 agagaaaaagttattaaaaagttatcacaaagtggatgtacaaatatcatttctcta 68  Q
    ||||| |||||| |||||||||| | | ||||||| |||||||||||||||| ||||    
T  263712 agagagaaagttgttaaaaagttgttagaaagtggttgtacaaatatcatttttcta 263768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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