View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1259-Insertion-1 (Length: 311)
Name: NF1259-Insertion-1
Description: NF1259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1259-Insertion-1 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 8 - 311
Target Start/End: Original strand, 43114611 - 43114915
Alignment:
| Q |
8 |
aaaattgttgtagaatgtagtagtgtgattttattcaatcttcaaaatgttgattttattaaaattacactgtgttttgattattgtaaactgaaaccca |
107 |
Q |
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| T |
43114611 |
aaaattgttgtagaatgtagtagtgtgattttattcaatcttcaaaatgttgattttattaaaattacactgtgttttgattattgtaaactgtaaccca |
43114710 |
T |
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| Q |
108 |
aacatgcattgtgttgctgtccataaacacatttgagaagttagttattactagtattttgtggttgcaggccatgattgataaataattcatctcttgt |
207 |
Q |
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| T |
43114711 |
aatatgcattgtgttgctgtccataaacacatttgagaagttagttattactagtattttgtggttgcaggccatgattgataaataattcatctcttgt |
43114810 |
T |
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| Q |
208 |
a-cnnnnnnnnnnnnnntcatctctaatgttgtgtttggtttattaaagaaagaaaatactccatcggtctcannnnnnnagagaaattttaccttttaa |
306 |
Q |
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| T |
43114811 |
accaaaaaaaaaaaaaatcatctctaatgttgtgtttggtttattaaagaaagagaatactccatcggtctcatttttttagagaaattttaccttttaa |
43114910 |
T |
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| Q |
307 |
attca |
311 |
Q |
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||||| |
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| T |
43114911 |
attca |
43114915 |
T |
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