View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1259-Insertion-3 (Length: 831)
Name: NF1259-Insertion-3
Description: NF1259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1259-Insertion-3 |
 | |
|
| [»] chr1 (22 HSPs) |
| |
|
| [»] scaffold0329 (1 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
| [»] scaffold0005 (1 HSPs) |
| | |
|
| [»] scaffold0687 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 711; Significance: 0; HSPs: 22)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 711; E-Value: 0
Query Start/End: Original strand, 12 - 831
Target Start/End: Complemental strand, 10018866 - 10018052
Alignment:
| Q |
12 |
tgtaggtatattgagggactaacatgacaatattaacgaaacattttaacataaaagaccattttgacagatgtagtacacaatgttgactattttaaaa |
111 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10018866 |
tgtaggtatattgaggaactaacatgacaatattaacgaaacattttaacataaaagaccattttgacagatgtagtacacaatgttgactattttaaaa |
10018767 |
T |
|
| Q |
112 |
ttttgatacattgatagactattgtgactactggttacatattcaggaacaaaatgactattaccccgaaatcatttatcccataagagtgggaattcat |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10018766 |
ttttgatacattgatagactattgtgactactggttacatattcaggaacaaaatgac------cccgaaatcatttaccccataagagtgggaattcat |
10018673 |
T |
|
| Q |
212 |
cgccaccacttatatccataaccataaaatatgttaggaaggctaacttgtcaatctgtaaaagcaatgtacttatgatgagtacaacagtgcggaaccc |
311 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10018672 |
caccaccacttatatccataaccataaaatatgttaggaaggttaacttatcaatctgtaaaagcaatgtacttatgatgagtacaacagtgcggaaccc |
10018573 |
T |
|
| Q |
312 |
gtcagcaatgtagcaagaaaaggttggaaacatggtaatttggtgaatcacttttaatttggtgaatcccttgcatcgaccacaatatctatcttcagaa |
411 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
10018572 |
gtcagcaatgtagcaagaaaaggttggaaacatggtaatttggtgaatcacttttaatttggtgaatcccttgcatcgactacaatatctatcttcagaa |
10018473 |
T |
|
| Q |
412 |
caaatacattgtccttccaaagcacagccatcaaattttaccaattccttccaatacaaaatctcatctgaccaatcaccagagaatacattttgtggat |
511 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10018472 |
taaatacattgtccttccaaagcacagccatcaaattttaccaattccttccaatacaaaatctcatctgaccaatcaccagagaatacattttgtggat |
10018373 |
T |
|
| Q |
512 |
cca-nnnnnnnnnnnnngcttcaataaagattaaactttggagatttatgttgcacatttaaaaatgctaagttcctattcttagcccaatgtggcttag |
610 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10018372 |
ccattttttttttttttgcttcaataaagattaaactttggagatttatgttgcacatttaaaaatgctaagttcctattcttagcccaatgtggcttag |
10018273 |
T |
|
| Q |
611 |
cactatacttaaaaagacaatctgttacaatttctcccacacatcttggtttaatctagcaggaaattgatcatttgcaagataatagttgatatcaatc |
710 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10018272 |
cactataattaaaaagacaatctgttacaatttctcccacacatcttggtttaatctagcaggaaattgatcatttgcaagataatagttgaaatcaatc |
10018173 |
T |
|
| Q |
711 |
actacagactcttctggttgtcctatacttttgaggctttaatgtaacgtatcaaaattccattatagatatcgatgccacgaaaattttgtggatttat |
810 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
10018172 |
actacagactcttctggttgtcctatacttttgaggctttaatgtaacgtatcaaaattccattatagatatcgatgccacaaaaattttgtggatttat |
10018073 |
T |
|
| Q |
811 |
atctcttaatttcttcacatc |
831 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
10018072 |
atctcttaatttcttcacatc |
10018052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 389 - 830
Target Start/End: Complemental strand, 20432099 - 20431654
Alignment:
| Q |
389 |
gaccacaatatctatcttcagaacaaatacattgtccttccaaagcacagccatcaaattttaccaattccttccaatacaaaatctcatctgaccaatc |
488 |
Q |
| |
|
||||| ||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| |||| |
|
|
| T |
20432099 |
gaccataatgtctatcttcaaaacaaatacattgtccttccaaagcacaaccatcaaattttaccaattccttcccatacaaaatctcatgtgactaatc |
20432000 |
T |
|
| Q |
489 |
accagagaatacattttgtggatccannnnnnnnnnnnngcttcaataaa--gattaaactttggagatttatgttgcacatttaaaaatgctaagttcc |
586 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
20431999 |
accagagaatacatcttgtggatccatttgttttttt--gcttcaataaaaagattaaacttcggatatttatgttgcacatttaaaaatgctaagttcc |
20431902 |
T |
|
| Q |
587 |
tattcttagcccaatgtggcttagcactatacttaaaaagacaatctgttacaatttctcccacacatcttggtttaatctagcaggaaattgatcattt |
686 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20431901 |
tattcttatcccaatgtggcttagcactatacttgaaaaggcaatctgttccaatttctcccacacatcttggtttaatctagcaggaaattgatcattt |
20431802 |
T |
|
| Q |
687 |
gcaagataatagttgatatcaatcactacagactcttctggttgtcc----tatacttttgaggctttaatgtaacgtatcaaaattccattatagatat |
782 |
Q |
| |
|
||| |||||||||||| ||||||||||||||| ||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
20431801 |
gcacgataatagttgaaatcaatcactacagagtcttctgattgtcctagatatacttccgaggctttaatgtaacgtatcaaaattccattataaatat |
20431702 |
T |
|
| Q |
783 |
cgatgccacgaaaattttgtggatttatatctcttaatttcttcacat |
830 |
Q |
| |
|
| ||||||| |||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
20431701 |
ctatgccacaaaaattttgtggatttatgtttcttaatttcttcacat |
20431654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 393 - 831
Target Start/End: Original strand, 8732890 - 8733333
Alignment:
| Q |
393 |
acaatatctatcttcagaacaaatacattgtccttccaaagcacagccatcaaattttaccaattccttccaatacaaaatctcatctgaccaatcacca |
492 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
8732890 |
acaatgtctatcttcagaacaaatacattgtccttccaaagcacagccatcaaattttactaattccttcccatacaaaatctcatctgaccaatcacca |
8732989 |
T |
|
| Q |
493 |
gagaatacattttgtggatccannnnnnnnnnnnngcttcaataaa--gattaaactttggagatttatgttgcacatttaaaaatgctaagttcctatt |
590 |
Q |
| |
|
||||| |||||||| | ||||| ||||||||||| |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
8732990 |
gagaacacattttgcgtatccatttggttttta--gcttcaataaaaagattaaactttggatatttatgttgcacatttgaaattgctaagttcctatt |
8733087 |
T |
|
| Q |
591 |
cttagcccaatgtggcttagcactatactt-aaaaagacaatctgttacaatttctcccacacatcttggtttaatctagcaggaaattgatcatttgca |
689 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||| |||| |||| ||||| ||||||||| |||||||||||||||| || |||||| |||||||| |
|
|
| T |
8733088 |
cttagcccaatgtggcttagcaccatacttgaaaaatgcaatttgttccaattcctcccacacgtcttggtttaatctaggagtaaattggtcatttgct |
8733187 |
T |
|
| Q |
690 |
agataatagttgatatcaatcactacagactcttctggttgtcc----tatacttttgaggctttaatgtaacgtatcaaaattccattatagatatcga |
785 |
Q |
| |
|
|||||||||||| |||||| |||||||| ||||||| |||||| ||| ||| ||||||||||||||||||||||||||||||||||||| | || | |
|
|
| T |
8733188 |
cgataatagttgaaatcaataactacagagtcttctgattgtcctagatatgcttctgaggctttaatgtaacgtatcaaaattccattatagttgtcta |
8733287 |
T |
|
| Q |
786 |
tgccacgaaaattttgtggatttatatctcttaatttcttcacatc |
831 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
8733288 |
tgccacaaaaattttgtggatttatgtctcttagtttcttcacatc |
8733333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 572 - 831
Target Start/End: Original strand, 8714249 - 8714513
Alignment:
| Q |
572 |
aaaatgctaagttcctattcttagcccaatgtggcttagcactatactt-aaaaagacaatctgttacaatttctcccacacatcttggtttaatctagc |
670 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||||||| |||||| ||||| ||||| |||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
8714249 |
aaaatgctaggttcctatttttagcccaatgtggcttagcaccatacttgaaaaatacaatttgttccaattcctcccacacatcttggtttaatctagg |
8714348 |
T |
|
| Q |
671 |
aggaaattgatcatttgcaagataatagttgatatcaatcactacagactcttctggttgtcc----tatacttttgaggctttaatgtaacgtatcaaa |
766 |
Q |
| |
|
|| |||||||||||||||| |||||||||||| ||||||||||||||| ||||||| |||||| ||| ||| |||||||||||||| |||||||| |
|
|
| T |
8714349 |
agtaaattgatcatttgcacgataatagttgaaatcaatcactacagagtcttctgattgtcctagatatgcttccaaggctttaatgtaatgtatcaaa |
8714448 |
T |
|
| Q |
767 |
attccattatagatatcgatgccacgaaaattttgtggatttatatctcttaatttcttcacatc |
831 |
Q |
| |
|
|||||||||||||| || ||||||| |||| ||| ||||||||| ||||||| |||||||||||| |
|
|
| T |
8714449 |
attccattatagatgtctatgccacaaaaaatttctggatttatgtctcttagtttcttcacatc |
8714513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 12238489 - 12238418
Alignment:
| Q |
8 |
aatatgtaggtatattgagggactaacatgacaatattaacgaaacattttaacataaaagaccattttgac |
79 |
Q |
| |
|
|||||| | |||||||||| |||||| ||||||||||||||||||||||||||| ||| ||| |||||||| |
|
|
| T |
12238489 |
aatatgaatgtatattgagagactaatatgacaatattaacgaaacattttaacgcaaatgactattttgac |
12238418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 34827009 - 34827068
Alignment:
| Q |
17 |
gtatattgagggactaacatgacaatattaacgaaacattttaacataaaagaccatttt |
76 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
34827009 |
gtatattgaatgactaatatgacaatattaacgaaacattttaacatcaaagactatttt |
34827068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 2998954 - 2998897
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgactactggttacatattcag |
157 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||||| |||| |||||| |||||| |
|
|
| T |
2998954 |
actattttaaaattttgatacatttacagactattgtgattacttgttacacattcag |
2998897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 34177353 - 34177278
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaac-aaaatgactatt |
173 |
Q |
| |
|
||||||||| ||||||||||| ||||| |||| |||||| || || |||||||||||||| || |||||||||||| |
|
|
| T |
34177353 |
gactattttgaaattttgatatattgaaagacgattgtggctcctcgttacatattcagggactaaaatgactatt |
34177278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 45392351 - 45392284
Alignment:
| Q |
112 |
ttttgatacattgatagactattgtgactactggttacatattcaggaa-caaaatgactattacccc |
178 |
Q |
| |
|
|||||||||||||| ||||||| |||||||| ||||| ||||||||| |||||||||||||||||| |
|
|
| T |
45392351 |
ttttgatacattgagggactattttgactactcattacacattcaggaatcaaaatgactattacccc |
45392284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 50804342 - 50804263
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattc-aggaacaaaatgactattaccc |
177 |
Q |
| |
|
||||||||||||||||||| ||||| | ||||||||||||| ||| |||||| |||| |||| ||||| |||||||||| |
|
|
| T |
50804342 |
gactattttaaaattttgacacattcaaagactattgtgaccactcgttacacattcaaggactaaaataactattaccc |
50804263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 16192275 - 16192353
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaac-aaaatgactattaccc |
177 |
Q |
| |
|
|||||||||||||||||||||||||| || |||| |||||||| |||||| ||||| | || ||||||||||| |||| |
|
|
| T |
16192275 |
actattttaaaattttgatacattgaaggaatattatgactacttgttacacattcaagtactaaaatgactatcaccc |
16192353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 45679579 - 45679522
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgactactggttacatattcag |
157 |
Q |
| |
|
|||||||||||||||| |||| ||||| || ||||||||||||| |||||| |||||| |
|
|
| T |
45679579 |
actattttaaaattttaatacgttgatggattattgtgactactcgttacacattcag |
45679522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 6541172 - 6541120
Alignment:
| Q |
8 |
aatatgtaggtatattgagggactaacatgacaatattaacgaaacattttaa |
60 |
Q |
| |
|
|||| ||| ||||||||| ||||||| |||||||||||||||||| ||||||| |
|
|
| T |
6541172 |
aataagtaagtatattgaaggactaatatgacaatattaacgaaatattttaa |
6541120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 6728026 - 6728106
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaac-aaaatgactattacccc |
178 |
Q |
| |
|
||||||||| ||||||||| |||||| |||||||||||||| | |||||| ||||||| || ||||||||||| ||||| |
|
|
| T |
6728026 |
gactattttggaattttgattcattgaaggactattgtgactattcgttacacattcagggacgaaaatgactatcacccc |
6728106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 743 - 827
Target Start/End: Original strand, 8711618 - 8711701
Alignment:
| Q |
743 |
gaggctttaatgtaacgtatcaaaattccattatagatatcgatgccacgaaaattttgtggatttatatctcttaatttcttca |
827 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| | || |||| || ||||| |||||||||||| ||| | | |||||||| |
|
|
| T |
8711618 |
gaggctttaatgtaacatatcaaaattccattataattttctatgctac-aaaatattgtggatttatgtctataagtttcttca |
8711701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 734 - 774
Target Start/End: Original strand, 8724983 - 8725023
Alignment:
| Q |
734 |
tatacttttgaggctttaatgtaacgtatcaaaattccatt |
774 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
8724983 |
tatacttatgaggctttaatgtaacatatcaaaattccatt |
8725023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 9890730 - 9890801
Alignment:
| Q |
101 |
ctattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaa-caaaatgacta |
171 |
Q |
| |
|
|||||||| |||||| ||||||||| |||||||||||| || | ||| || ||||||||| ||||||||||| |
|
|
| T |
9890730 |
ctattttagaattttaatacattgagagactattgtgattaatcgttccacattcaggaaccaaaatgacta |
9890801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 19464287 - 19464240
Alignment:
| Q |
103 |
attttaaaattttgatacattgatagactattgtgactactggttaca |
150 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
19464287 |
atttttaaattttgatacattgaaggactattgtgactacttgttaca |
19464240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 27900695 - 27900620
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattc-aggaacaaaatgactatt |
173 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||||| |||| | ||| |||||| |||| |||| |||||||| |
|
|
| T |
27900695 |
gactattttaaaattttgatacattaagagactattgtaactattctttatatattcaaggaccaaagtgactatt |
27900620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 32669833 - 32669783
Alignment:
| Q |
127 |
agactattgtgactactggttacatattca-ggaacaaaatgactattacc |
176 |
Q |
| |
|
||||||||||||||||| |||||| ||||| ||| |||||||||||||||| |
|
|
| T |
32669833 |
agactattgtgactactcgttacacattcatggaccaaaatgactattacc |
32669783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 36144850 - 36144785
Alignment:
| Q |
110 |
aattttgatacattgatagactattgtgactactggttacatattc-aggaacaaaatgactatta |
174 |
Q |
| |
|
||||||||||||||| ||| |||||||| |||| |||||||||| |||| |||||||||||||| |
|
|
| T |
36144850 |
aattttgatacattgggagagtattgtgattactcattacatattcaaggaccaaaatgactatta |
36144785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 50155585 - 50155529
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgactactggttacatattcag |
157 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||| |||||||| ||||| |||||| |
|
|
| T |
50155585 |
actattttaaaattttgatacattga-aaactattatgactactcattacacattcag |
50155529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 56; Significance: 9e-23; HSPs: 20)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 8 - 177
Target Start/End: Original strand, 17488131 - 17488302
Alignment:
| Q |
8 |
aatatgtaggtatattgagggactaacatgacaatattaacgaaacattttaacataaaagaccattttgacagatgtagtacacaat-gttgactattt |
106 |
Q |
| |
|
|||| ||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| | | |||||||| | || | |||||| |||||||| |
|
|
| T |
17488131 |
aataagtaagtatattgagggactaatatgacgatattaacgaaacattttaacataaatggctattttgaccaacataattcacaatcaaggactattt |
17488230 |
T |
|
| Q |
107 |
taaaattttgatacattgatagactattgtgactactggttacatattca-ggaacaaaatgactattaccc |
177 |
Q |
| |
|
| |||||| | |||||||| |||||||||||||||| |||||| ||||| ||| |||||||||| |||||| |
|
|
| T |
17488231 |
tgaaatttcgctacattgagggactattgtgactacttgttacacattcagggagcaaaatgactgttaccc |
17488302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 21601983 - 21601904
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaacaaaatgactattacccc |
178 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||||||||| | ||||||||||||||| ||||||||| |||||||| |
|
|
| T |
21601983 |
gactattttggaattttgatacattgatggactattgtgactatttgttacatattcaggaccaaaatgaccattacccc |
21601904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 174
Target Start/End: Complemental strand, 28802360 - 28802283
Alignment:
| Q |
98 |
tgactattttaaaattttgatacattgatagactattgtgactactggttacatattcag-gaacaaaatgactatta |
174 |
Q |
| |
|
||||||||||||||||||||||||| ||| |||||||||||||| | |||||| |||||| || ||||||||||||| |
|
|
| T |
28802360 |
tgactattttaaaattttgatacatcgatggactattgtgactatttgttacacattcagcgactaaaatgactatta |
28802283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 4586826 - 4586747
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattc-aggaacaaaatgactattaccc |
177 |
Q |
| |
|
||||||||||||||||| ||||||| | |||||||||| |||||| |||||| |||| |||| |||||| |||||||||| |
|
|
| T |
4586826 |
gactattttaaaattttaatacattaagagactattgtaactactcgttacacattcaaggatcaaaataactattaccc |
4586747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 21145528 - 21145466
Alignment:
| Q |
17 |
gtatattgagggactaacatgacaatattaacgaaacattttaacataaaagaccattttgac |
79 |
Q |
| |
|
|||||||||| |||||| |||| |||||||||||||||||||||| ||| |||| |||||||| |
|
|
| T |
21145528 |
gtatattgagagactaatatgataatattaacgaaacattttaacgtaagagactattttgac |
21145466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 2987175 - 2987251
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaa-caaaatgactattac |
175 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||||| | ||| || ||| ||||| ||||||||||||||| |
|
|
| T |
2987175 |
gactattttaaaattttgatacattgaga-actattgtgactaatcgtttcacatttaggaaccaaaatgactattac |
2987251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 10029007 - 10029081
Alignment:
| Q |
103 |
attttaaaattttgatacattgatagactattgtgactactggtt--acatattcaggaacaaaatgactattac |
175 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||| ||| ||||||| | || ||||||||||||||| |
|
|
| T |
10029007 |
attttaaaattttgatacattgaatgactattgtaactactcgttgcacatatttaagatcaaaatgactattac |
10029081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 177
Target Start/End: Complemental strand, 33590167 - 33590089
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaac-aaaatgactattaccc |
177 |
Q |
| |
|
||||||||| |||||| ||||||||| |||||||||||| || | ||| ||||||||| || |||||||||||||||| |
|
|
| T |
33590167 |
actattttacaattttaatacattgagagactattgtgattatttgttgcatattcagatactaaaatgactattaccc |
33590089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 41302707 - 41302650
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattca |
156 |
Q |
| |
|
||||||||||||||||| |||| |||| |||||||||||| |||| |||||| ||||| |
|
|
| T |
41302707 |
gactattttaaaattttaatactttgaaagactattgtgattactcgttacacattca |
41302650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 12511544 - 12511591
Alignment:
| Q |
17 |
gtatattgagggactaacatgacaatattaacgaaacattttaacataa |
65 |
Q |
| |
|
||||||||||||||||| || ||||||||||| |||||||||||||||| |
|
|
| T |
12511544 |
gtatattgagggactaatattacaatattaac-aaacattttaacataa |
12511591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 36348911 - 36348859
Alignment:
| Q |
8 |
aatatgtaggtatattgagggactaacatgacaatattaacgaaacattttaa |
60 |
Q |
| |
|
|||||||| | ||||| ||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
36348911 |
aatatgtatgaatattaagggactaatatgacaatattaacgaaacactttaa |
36348859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 3093981 - 3094020
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtga |
138 |
Q |
| |
|
||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
3093981 |
gactattttaaaattttgatatattgaaagactattgtga |
3094020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 8982301 - 8982376
Alignment:
| Q |
102 |
tattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaac-aaaatgactattacc |
176 |
Q |
| |
|
||||||||||||||||||||| || | ||||||||||||| | ||| | |||||| ||| ||||||||||||||| |
|
|
| T |
8982301 |
tattttaaaattttgatacatcgagaaactattgtgactaatcattatacattcagaaacaaaaatgactattacc |
8982376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 21145665 - 21145743
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagac--tattgtgactactggttacatattcaggaa-caaaatgactatta |
174 |
Q |
| |
|
||||||||| ||||| ||||| ||||||||| ||||||| ||||| |||||| ||||||||| |||||||||||||| |
|
|
| T |
21145665 |
gactattttggaatttcgatacgttgatagactatattgtggctactcgttacacattcaggaaccaaaatgactatta |
21145743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 21600479 - 21600412
Alignment:
| Q |
98 |
tgactattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaacaaaa |
165 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||||||||| ||| || || |||||| ||||||| |
|
|
| T |
21600479 |
tgactattttaaaattttgatacattaagggactattgtgacaactcattgcacattcagaaacaaaa |
21600412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 10708428 - 10708350
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaacaaaatgactattacccc |
178 |
Q |
| |
|
||||||||| |||||| ||||||||| ||||||||||| |||| |||||| ||| || || |||||| ||||||||| |
|
|
| T |
10708428 |
actattttagaattttcatacattgaaagactattgtggttacttgttacacatttagagaccaaatgattattacccc |
10708350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 7603966 - 7603925
Alignment:
| Q |
102 |
tattttaaaattttgatacattgatagactattgtgactact |
143 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
7603966 |
tattttaaaattttgatacattgaaagactattccgactact |
7603925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 143
Target Start/End: Original strand, 14532452 - 14532493
Alignment:
| Q |
102 |
tattttaaaattttgatacattgatagactattgtgactact |
143 |
Q |
| |
|
|||||||||||||||||| ||| | ||||||||||||||||| |
|
|
| T |
14532452 |
tattttaaaattttgatatattaagagactattgtgactact |
14532493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 24018058 - 24018009
Alignment:
| Q |
17 |
gtatattgagggactaacatgacaatattaacgaaacattttaacataaa |
66 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||| ||||||| ||||| |
|
|
| T |
24018058 |
gtatattgaatgactaatatgacaatattaacgaaatattttaatataaa |
24018009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 42442744 - 42442785
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgacta |
141 |
Q |
| |
|
|||||||| | ||||||||||||||| ||||||||||||||| |
|
|
| T |
42442744 |
actattttgagattttgatacattgaaagactattgtgacta |
42442785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 54; Significance: 1e-21; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 9436687 - 9436828
Alignment:
| Q |
17 |
gtatattgagggactaacatgacaatattaacgaaacattttaacataaaagaccattttgacagatgtagtacacaatgt-tgactattttaaaatttt |
115 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| ||| ||||||||||||| ||| ||| ||| | |||| |||||| ||||||||||||||||| |
|
|
| T |
9436687 |
gtatattgcgggactaatatgacaatattaacaaaatattttaacataaatgactattctgaataacatagtgcacaatcagtgactattttaaaatttc |
9436786 |
T |
|
| Q |
116 |
gatacattgatagactattgtgactactggttacatattcag |
157 |
Q |
| |
|
||| |||||| ||||||||||||||||| ||||| ||||||| |
|
|
| T |
9436787 |
gatccattgagagactattgtgactactcgttacctattcag |
9436828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 178
Target Start/End: Complemental strand, 21020928 - 21020847
Alignment:
| Q |
98 |
tgactattttaaaattttgatacattgatagactattgtgactactggttacatattca-ggaacaaaatgactattacccc |
178 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||| | | |||| |||| ||||||| ||| |||||||||||||||||| |
|
|
| T |
21020928 |
tgactattttaaaattttgatacatcgaaagactattataattactcgttatatattcagggaccaaaatgactattacccc |
21020847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 3711351 - 3711293
Alignment:
| Q |
18 |
tatattgagggactaacatgacaatattaacgaaacattttaacataaaagaccatttt |
76 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||||||||| | || ||||||||| |
|
|
| T |
3711351 |
tatattgaggaactaatatgacaatattaacgaaacattttaacgtcaaggaccatttt |
3711293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 19134476 - 19134537
Alignment:
| Q |
18 |
tatattgagggactaacatgacaatattaacgaaacattttaacataaaagaccattttgac |
79 |
Q |
| |
|
|||||||| ||||||| || ||||||||||||||| |||||||| |||||||| |||||||| |
|
|
| T |
19134476 |
tatattgatggactaatataacaatattaacgaaatattttaacgtaaaagacgattttgac |
19134537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 142
Target Start/End: Complemental strand, 515803 - 515760
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactac |
142 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
515803 |
gactattttaaaattttgatacattgagatactattgtgactac |
515760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 10067751 - 10067830
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattc-aggaacaaaatgactattaccc |
177 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||||| |||| |||||| |||| | || |||||||||||||||| |
|
|
| T |
10067751 |
gactattttaaaatttcgatacattgagagactattgtggttacttgttacacattcaaagactaaaatgactattaccc |
10067830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 19264752 - 19264830
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattc-aggaacaaaatgactattaccc |
177 |
Q |
| |
|
|||||||||||||||| |||||||| | ||||||||||||||||| |||||| |||| |||| ||||||||||||||| |
|
|
| T |
19264752 |
gactattttaaaatttcgatacatt-agagactattgtgactactcgttacacattcaaggacgtaaatgactattaccc |
19264830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 7955187 - 7955236
Alignment:
| Q |
105 |
tttaaaattttgatacattgatagactattgtgactactggttacatatt |
154 |
Q |
| |
|
||||||||||||||||||||| | | |||||||||||||| ||||||||| |
|
|
| T |
7955187 |
tttaaaattttgatacattgaaatattattgtgactactgattacatatt |
7955236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 12278225 - 12278269
Alignment:
| Q |
35 |
atgacaatattaacgaaacattttaacataaaagaccattttgac |
79 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||| |||||||| |
|
|
| T |
12278225 |
atgacaatattaacgaaacattttaacgtaagagacaattttgac |
12278269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 20565802 - 20565877
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattc-aggaacaaaatgactatta |
174 |
Q |
| |
|
||||||||||||| || ||||||||||| ||||||| |||||||| ||| | |||| ||||||||||||||||||| |
|
|
| T |
20565802 |
gactattttaaaaattcgatacattgatggactattatgactactcgttgc-cattcaaggaacaaaatgactatta |
20565877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 27100724 - 27100803
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattca-ggaacaaaatgactattaccc |
177 |
Q |
| |
|
||||||||| ||||||||||| | |||| |||||| ||||||||| ||||| ||| | ||| ||||||||||||||||| |
|
|
| T |
27100724 |
gactattttgaaattttgatatactgatgaactattatgactactgattacaaatttagggaccaaaatgactattaccc |
27100803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 5071336 - 5071369
Alignment:
| Q |
110 |
aattttgatacattgatagactattgtgactact |
143 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| |
|
|
| T |
5071336 |
aattttgatacattgataaactattgtgactact |
5071369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 31951854 - 31951911
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattca |
156 |
Q |
| |
|
|||||||||| ||||||| |||| | |||||||||||| |||| | |||||||||||| |
|
|
| T |
31951854 |
gactattttagaattttgttacaatcatagactattgtaactaattgttacatattca |
31951911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 32)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 35255494 - 35255572
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgactactggttacatattca-ggaacaaaatgactattaccc |
177 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||||||||||||| |||||||||| | ||| |||||| |||||||||| |
|
|
| T |
35255494 |
actattttaaaattttaatacattgagagactattgtgactactcgttacatatttagggaccaaaataactattaccc |
35255572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 17381360 - 17381280
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaa-caaaatgactattacccc |
178 |
Q |
| |
|
|||| |||| ||||||||||||||||| |||||||||||||||| | |||| ||||||||| |||||||||||||||||| |
|
|
| T |
17381360 |
gacttttttgaaattttgatacattgaaggactattgtgactacttgctacacattcaggaaccaaaatgactattacccc |
17381280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 17753335 - 17753258
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgata-gactattgtgactactggttacatattcag-gaacaaaatgactatta |
174 |
Q |
| |
|
||||||||| ||||||||||||||||| | |||||||||||||||| |||||||||||| || |||||||||||||| |
|
|
| T |
17753335 |
gactattttgaaattttgatacattgaaatgactattgtgactactcattacatattcagagatcaaaatgactatta |
17753258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 12034458 - 12034378
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattca-ggaacaaaatgactattacccc |
178 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||||||||||| |||| | ||||| ||| |||||||||||||||||| |
|
|
| T |
12034458 |
gactattttgcaattttgatacattgagggactattgtgactactcgttatacattcagggaccaaaatgactattacccc |
12034378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 158
Target Start/End: Original strand, 17381488 - 17381639
Alignment:
| Q |
8 |
aatatgtaggtatattgagggactaacatgacaatattaacgaaacattttaacataaaagaccattttgacagatgtagtacacaat-gttgactattt |
106 |
Q |
| |
|
|||| ||| ||||||||| ||||||| |||||||||||||||||| ||||||| || || ||| ||||||| | ||| |||||| |||||||| |
|
|
| T |
17381488 |
aataagtaagtatattgaaggactaatatgacaatattaacgaaatattttaatatcaaggactattttgattaacaaagtgcacaatcagggactattt |
17381587 |
T |
|
| Q |
107 |
taaaattttgatacattgatagactattgtgactactggttacatattcagg |
158 |
Q |
| |
|
| |||||||||||||||| |||||||||||||||| ||||| ||||||| |
|
|
| T |
17381588 |
tggaattttgatacattgagggactattgtgactacttgttactcattcagg |
17381639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 51150915 - 51150834
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactat--tgtgactactggttacatattcaggaa-caaaatgactattacccc |
178 |
Q |
| |
|
||||||||||||||||||||||||||| | |||| | |||||||| ||||||||||||||| |||||||| ||||||||| |
|
|
| T |
51150915 |
actattttaaaattttgatacattgatggtctattatatgactactccttacatattcaggaaccaaaatgattattacccc |
51150834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 971921 - 971844
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaacaaaatgactattacc |
176 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||||||| ||| |||||| |||||| || || ||||||||||| |
|
|
| T |
971921 |
gactattttgaaattttgatacattgaatgactattgtgacaactcgttacaaattcagtgaccaagtgactattacc |
971844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 46804831 - 46804774
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattca |
156 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| ||| || |||||||||||| |
|
|
| T |
46804831 |
gactattttaaaattttgatacattgagggactattgtcactgctcgttacatattca |
46804774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 4215197 - 4215277
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattcagg-aacaaaatgactattacccc |
178 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||| || | | |||||||||||||||| |
|
|
| T |
4215197 |
gactattttaaaattttgattcattgagggactattgcgactactcgttacacattcgggtatcgaaatgactattacccc |
4215277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 13834539 - 13834614
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaacaaaatgactatta |
174 |
Q |
| |
|
||||||||||||||||| ||||||| | ||||| ||||||||||| ||||| |||||||| | |||| ||||||| |
|
|
| T |
13834539 |
gactattttaaaattttaatacattaaaagactgttgtgactactcattacacattcaggacctaaataactatta |
13834614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 26499352 - 26499277
Alignment:
| Q |
102 |
tattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaa-caaaatgactattacc |
176 |
Q |
| |
|
||||||| |||||| ||||||| | ||| ||||||||||||| ||||| ||||||||| |||||||||||||||| |
|
|
| T |
26499352 |
tattttagaattttaatacattaagagattattgtgactactttttacacattcaggaaccaaaatgactattacc |
26499277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 174
Target Start/End: Original strand, 51226141 - 51226212
Alignment:
| Q |
103 |
attttaaaattttgatacattgatagactattgtgactactggttacatattcaggaacaaaatgactatta |
174 |
Q |
| |
|
|||||| ||||| |||||||||| ||||||||||||| ||| |||||||||| || || |||||||||||| |
|
|
| T |
51226141 |
attttagaatttcgatacattgaaagactattgtgacaacttgttacatattgagagaccaaatgactatta |
51226212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 174
Target Start/End: Original strand, 924844 - 924918
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaacaaaatgactatta |
174 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||| | |||||| ||||||| ||| | | ||||||||||||| |
|
|
| T |
924844 |
actattttaaaattttgctacattgaaagactattattactactcgttacatgttcggcattaaaatgactatta |
924918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 20217486 - 20217532
Alignment:
| Q |
102 |
tattttaaaattttgatacattgatagactattgtgactactggtta |
148 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| ||||| |||| |
|
|
| T |
20217486 |
tattttaaaattttgatacattgagagactattgtggctactcgtta |
20217532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 183
Target Start/End: Complemental strand, 35075698 - 35075612
Alignment:
| Q |
98 |
tgactattttaaaattttgatacattgatagactattgtgactactggttacatattcag-gaacaaaatgactattaccccgaaat |
183 |
Q |
| |
|
|||||||||||||||||||| ||||| | | | ||||||||||||| ||||||||| || || |||||| |||||||||| ||||| |
|
|
| T |
35075698 |
tgactattttaaaattttgacacattcaaatattattgtgactactcattacatatttagcgaccaaaataactattaccctgaaat |
35075612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 141
Target Start/End: Complemental strand, 46217016 - 46216975
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgacta |
141 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
46217016 |
actattttaaaattttgatacattgagagactattgttacta |
46216975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 51151050 - 51151127
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgataga-ctattgtgactactggttacatattc-aggaacaaaatgactatta |
174 |
Q |
| |
|
||||||||||||||||| ||||||||| ||| ||||||||||||| |||||| |||| |||| |||||| ||||||| |
|
|
| T |
51151050 |
gactattttaaaattttaatacattgagagatttattgtgactactcgttacacattcaaggaccaaaataactatta |
51151127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 4161698 - 4161654
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactact |
143 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
4161698 |
gactattttgaaattttgatacattgaaggactattgtgactact |
4161654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 11840064 - 11840144
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattca-ggaacaaaatgactattacccc |
178 |
Q |
| |
|
||||||||| ||||||||||||||||| | |||||| ||||||| |||| ||||| ||| |||||||||||||||||| |
|
|
| T |
11840064 |
gactattttgaaattttgatacattgagggcctattgcgactactccttacgcattcagggaccaaaatgactattacccc |
11840144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 45615678 - 45615618
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattcagga |
159 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||| ||||||||| | ||||| |||||||| |
|
|
| T |
45615678 |
gactattttaaaattttaatacattgaaagactgttgtgactattaattacacattcagga |
45615618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 174
Target Start/End: Original strand, 55132571 - 55132643
Alignment:
| Q |
103 |
attttaaaattttgatacattgatagactattgtgactactggttacatattcag-gaacaaaatgactatta |
174 |
Q |
| |
|
||||||||||||||||||||||| | |||||| ||||| || ||||| |||||| || |||||||||||||| |
|
|
| T |
55132571 |
attttaaaattttgatacattgaaaaactattttgactgctccttacacattcagagatcaaaatgactatta |
55132643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 14810332 - 14810273
Alignment:
| Q |
20 |
tattgagggactaacatgacaatattaacgaaacattttaacataaaagaccattttgac |
79 |
Q |
| |
|
|||||| | |||||||||||||||||||||||| || |||| || |||||| |||||||| |
|
|
| T |
14810332 |
tattgaagaactaacatgacaatattaacgaaatatattaatatcaaagactattttgac |
14810273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 30316033 - 30316112
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgactactggttacatattca-ggaacaaaatgactattacccc |
178 |
Q |
| |
|
||||||| |||||||||||||||||| |||| ||||||||||| ||| | ||||| ||| ||| |||||||||||||| |
|
|
| T |
30316033 |
actatttcaaaattttgatacattgaaggacttttgtgactacttattatacattcagggaccaatatgactattacccc |
30316112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 38080966 - 38081001
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactatt |
134 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| |
|
|
| T |
38080966 |
gactattttaaaattttgatacattgatggactatt |
38081001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 38932711 - 38932632
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaa-caaaatgactattaccc |
177 |
Q |
| |
|
||||||||||||||||| ||||||||| | |||||| |||||| | ||||| ||||| ||| | ||||||||||||||| |
|
|
| T |
38932711 |
gactattttaaaattttaatacattgaaacactattatgactatttattacacattcacgaaccgaaatgactattaccc |
38932632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 48973341 - 48973396
Alignment:
| Q |
8 |
aatatgtaggtatattgagggactaacatgacaatattaacgaaacattttaacat |
63 |
Q |
| |
|
|||| ||| ||||||||| ||||||| ||||||||||||| ||| ||||||||||| |
|
|
| T |
48973341 |
aataagtaagtatattgaaggactaatatgacaatattaatgaagcattttaacat |
48973396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 1758497 - 1758575
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaacaaaatgactattacccc |
178 |
Q |
| |
|
||||| |||||||||| ||||||||| |||||||||||| |||| ||| | ||||| | || |||| ||||||||||| |
|
|
| T |
1758497 |
actatcttaaaattttaatacattgagagactattgtgattacttattaaacattcaaggaccaaataactattacccc |
1758575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 4161830 - 4161892
Alignment:
| Q |
17 |
gtatattgagggactaacatgacaatattaacgaaacattttaacataaaagaccattttgac |
79 |
Q |
| |
|
||||||||| | ||||| ||||||||||||| |||||||||||| || | |||| |||||||| |
|
|
| T |
4161830 |
gtatattgaagaactaatatgacaatattaatgaaacattttaatatcatagactattttgac |
4161892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 12922241 - 12922183
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgactactggttacatattcagg |
158 |
Q |
| |
|
|||||||| |||||| |||||||||| | ||||||||||||||| ||||| ||||||| |
|
|
| T |
12922241 |
actattttgaaatttcgatacattgaaatactattgtgactacttattacacattcagg |
12922183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 41679203 - 41679256
Alignment:
| Q |
102 |
tattttaaaattttgatacattgatagactattgtgactactggttacatattca |
156 |
Q |
| |
|
|||||||||||||||||| ||||| | | ||||||||||||| |||||||||||| |
|
|
| T |
41679203 |
tattttaaaattttgatatattgaaa-attattgtgactactagttacatattca |
41679256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 26404514 - 26404465
Alignment:
| Q |
30 |
ctaacatgacaatattaacgaaacattttaacataaaagaccattttgac |
79 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||| || |||||||| |
|
|
| T |
26404514 |
ctaatatgacaatgttaacgaaacattttaacataaatgattattttgac |
26404465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 52700938 - 52700999
Alignment:
| Q |
17 |
gtatattgagggactaacatgacaatattaacgaaacattttaacataaaagaccattttga |
78 |
Q |
| |
|
||||||||| ||||| ||||||||||||| |||||||||||||| |||||| ||||||| |
|
|
| T |
52700938 |
gtatattgaaggactgttatgacaatattaataaaacattttaacatgaaagactattttga |
52700999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 46; Significance: 8e-17; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 8062901 - 8062978
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgactactggttacatattc-aggaacaaaatgactattacc |
176 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||||||||||||| |||||| |||| |||| |||||| ||||||||| |
|
|
| T |
8062901 |
actattttaaaattttaatacattgacagactattgtgactactcgttacacattcaaggaccaaaataactattacc |
8062978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 38838676 - 38838735
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattcagg |
158 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||||||| |||||| ||||||| |
|
|
| T |
38838676 |
gactattttaaaattttaatacattgatagaatattgtgactactcgttacacattcagg |
38838735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 1247574 - 1247494
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaac--aaaatgactattaccc |
177 |
Q |
| |
|
||||||||||||||||| ||||||| | | ||||||||||||||| |||||||||||||| || ||||| |||||||||| |
|
|
| T |
1247574 |
gactattttaaaattttaatacattaagaaactattgtgactactcgttacatattcagggaccaaaaataactattaccc |
1247494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 29778751 - 29778680
Alignment:
| Q |
22 |
ttgagggactaacatgacaatattaacgaaacattttaacataaaagaccattttgacagatgtagtacaca |
93 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||||||||||| || ||||||||| | ||||||||| |
|
|
| T |
29778751 |
ttgacggactaatatgacaatattaacgaaacattttaacataaatgattattttgacaaacatagtacaca |
29778680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 5362466 - 5362523
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattca |
156 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||||||||||| ||||||||||| |
|
|
| T |
5362466 |
gactattttaaaattttgatacattgaatgattattgtgactactccttacatattca |
5362523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 18942810 - 18942733
Alignment:
| Q |
102 |
tattttaaaattttgatacattgatagactattgtgactactggttacatattca-ggaacaaaatgactattacccc |
178 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||| | ||||| ||||| ||| |||||||||||||||||| |
|
|
| T |
18942810 |
tattttaaaattttgatacattgagtgactattatgactattccttacacattcagggaccaaaatgactattacccc |
18942733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 34703704 - 34703628
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattca-ggaacaaaatgactattac |
175 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||||||||||| |||| | ||| | ||| ||||||||||||||| |
|
|
| T |
34703704 |
gactattttaaaattt-gatacattgatggactattgtgactactcgttatacatttatggatcaaaatgactattac |
34703628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 29196826 - 29196773
Alignment:
| Q |
102 |
tattttaaaattttgatacattgatagactattgtgactactggttacatattc |
155 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||||| | |||||| |||| |
|
|
| T |
29196826 |
tattttaaaattttgatacattgaaaaactattgtgactattcgttacacattc |
29196773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 156
Target Start/End: Original strand, 39608612 - 39608668
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgactactggttacatattca |
156 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||||| |||||| ||||| ||||| |
|
|
| T |
39608612 |
actattttaaaattttgatacattgaaaaactattgtaactactccttacacattca |
39608668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 46720051 - 46720126
Alignment:
| Q |
103 |
attttaaaattttgatacattgatagactattgtgactactggttacatattcaggaa-caaaatgactattaccc |
177 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||||||| |||| ||||||||| || |||||||||||||| |
|
|
| T |
46720051 |
attttaaaatttcaatacattgagggactattgtgactacttgttattcattcaggaaccataatgactattaccc |
46720126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 143
Target Start/End: Original strand, 1344648 - 1344682
Alignment:
| Q |
109 |
aaattttgatacattgatagactattgtgactact |
143 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |
|
|
| T |
1344648 |
aaattttgatacattgatggactattgtgactact |
1344682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 5358283 - 5358241
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgacta |
141 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
5358283 |
gactattttaaaattttgatacattgaaggactattgtaacta |
5358241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 14669528 - 14669565
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtg |
137 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
14669528 |
actattttagaattttgatacattgagagactattgtg |
14669565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 20889451 - 20889512
Alignment:
| Q |
102 |
tattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaacaa |
163 |
Q |
| |
|
|||||| |||| |||||||||||| |||||||||| ||||| |||||| ||||||| |||| |
|
|
| T |
20889451 |
tattttgaaatgttgatacattgagggactattgtggctacttgttacacattcagggacaa |
20889512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 20)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 6645738 - 6645694
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactact |
143 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
6645738 |
gactattttaaaattttgatacattgatagactattgtaactact |
6645694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 917188 - 917265
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaa-caaaatgactattac |
175 |
Q |
| |
|
|||||||||||||||| |||||||||| ||| |||||||||| | ||||| ||||||||| ||||||||||||||| |
|
|
| T |
917188 |
gactattttaaaatttcgatacattgagggacgattgtgactaatatttacacattcaggaaccaaaatgactattac |
917265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 16127126 - 16127049
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattca-ggaacaaaatgactattac |
175 |
Q |
| |
|
||||||||| |||||||||||| |||| ||||||||||||||||| ||||| ||| | ||| ||||||||||||||| |
|
|
| T |
16127126 |
gactattttgaaattttgatactttgagagactattgtgactactccttacacatttagggaccaaaatgactattac |
16127049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 27001416 - 27001485
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaacaaaatga |
168 |
Q |
| |
|
||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| |||| |||||| |
|
|
| T |
27001416 |
gactattttaaaattttgatatatcgagagactattgtgactactcattacacattcaagaaccaaatga |
27001485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 155
Target Start/End: Complemental strand, 13200715 - 13200576
Alignment:
| Q |
17 |
gtatattgagggactaacatgacaatattaacgaaacattttaacataaaagaccattttgacagatgtagtacacaatgttg-actattttaaaatttt |
115 |
Q |
| |
|
|||||| |||||||||| |||| |||||||||||||||||||||| |||| |||||||| | ||||||| |||| | | ||||||||||||| |
|
|
| T |
13200715 |
gtatatcgagggactaatatgataatattaacgaaacattttaacgtaaagagttattttgactaacatagtacataatgaggaattattttaaaattta |
13200616 |
T |
|
| Q |
116 |
gatacattgatagactattgtgactactggttacatattc |
155 |
Q |
| |
|
|||| ||| | |||||||| |||||||| |||| |||||| |
|
|
| T |
13200615 |
gatatattaagagactattatgactactcgttaaatattc |
13200576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 23159104 - 23159025
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaac-aaaatgactattacccc |
178 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| | |||| | ||||| ||||||| || ||| ||||||||||||| |
|
|
| T |
23159104 |
actattttaaaattttgatacattgatggactattataactaatcattacacattcagggactaaagtgactattacccc |
23159025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 42420559 - 42420638
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgactactggttacatattcag-gaacaaaatgactattacccc |
178 |
Q |
| |
|
|||||||||||||||||||||||| | |||| |||||||||| |||||| |||||| || |||||| ||||||||||| |
|
|
| T |
42420559 |
actattttaaaattttgatacatttaaagacaattgtgactatacgttacacattcagagaccaaaataactattacccc |
42420638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 173
Target Start/End: Complemental strand, 4400711 - 4400641
Alignment:
| Q |
103 |
attttaaaattttgatacattgatagactattgtgactactggttacatattcaggaacaaaatgactatt |
173 |
Q |
| |
|
|||||||||||| |||||||| | || ||||||| ||||| ||||||||| ||||| ||||||||||||| |
|
|
| T |
4400711 |
attttaaaatttagatacattcaaggaatattgtggctactcgttacatatccaggatcaaaatgactatt |
4400641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 22579537 - 22579575
Alignment:
| Q |
102 |
tattttaaaattttgatacattgatagactattgtgact |
140 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
22579537 |
tattttaaaattttgatacattgatggactattgtgact |
22579575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 178
Target Start/End: Complemental strand, 6217453 - 6217376
Alignment:
| Q |
102 |
tattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaa-caaaatgactattacccc |
178 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||| |||||| ||||||||||| || |||| ||||||||||||| |
|
|
| T |
6217453 |
tattttaaaattttgatacattaagtgactattgtaactactttttacatattcaaaaatcaaattgactattacccc |
6217376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 6217673 - 6217749
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattca-ggaacaaaatgactatta |
174 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||||| ||| | | |||| ||||| ||| |||||||||||||| |
|
|
| T |
6217673 |
gactattttgaaattttgatacattgagggactattgtggctattcgctacacattcatggaccaaaatgactatta |
6217749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 29714717 - 29714789
Alignment:
| Q |
103 |
attttaaaattttgatacattgata-gactattgtgactactggttacatattcaggaa-caaaatgactatt |
173 |
Q |
| |
|
||||| |||||| |||||||||||| ||||||||| ||||||||||||| ||||| || ||||||||||||| |
|
|
| T |
29714717 |
attttgaaatttcgatacattgataagactattgtaactactggttacacattcaaaaaccaaaatgactatt |
29714789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 16750320 - 16750363
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgactact |
143 |
Q |
| |
|
|||||||||||||||||||||||| | ||| ||||||||||||| |
|
|
| T |
16750320 |
actattttaaaattttgatacattaaaagattattgtgactact |
16750363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 141
Target Start/End: Complemental strand, 26675077 - 26675038
Alignment:
| Q |
102 |
tattttaaaattttgatacattgatagactattgtgacta |
141 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
26675077 |
tattttaaaattttgatacattaatagactattgttacta |
26675038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 141
Target Start/End: Complemental strand, 26946685 - 26946646
Alignment:
| Q |
102 |
tattttaaaattttgatacattgatagactattgtgacta |
141 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
26946685 |
tattttaaaattttgatacattaatagactattgttacta |
26946646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 1276770 - 1276828
Alignment:
| Q |
98 |
tgactattttaaaattttgatacattgatagactattgtgactactggttacatattca |
156 |
Q |
| |
|
|||||| |||||||||||||| ||||||| || ||||||| ||||| |||||| ||||| |
|
|
| T |
1276770 |
tgactactttaaaattttgatgcattgatcgattattgtggctactcgttacacattca |
1276828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 3709349 - 3709303
Alignment:
| Q |
17 |
gtatattgagggactaacatgacaatattaacgaaacattttaacat |
63 |
Q |
| |
|
|||| |||||||||||| || |||||||||| ||||||||||||||| |
|
|
| T |
3709349 |
gtatgttgagggactaatattacaatattaatgaaacattttaacat |
3709303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 3709607 - 3709652
Alignment:
| Q |
98 |
tgactattttaaaattttgatacattgatagactattgtgactact |
143 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
3709607 |
tgactattttaaaattttgatatattgaattactattgtgactact |
3709652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 17676603 - 17676566
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtg |
137 |
Q |
| |
|
||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
17676603 |
actattttagaattttgatacattgagagactattgtg |
17676566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 29686640 - 29686685
Alignment:
| Q |
18 |
tatattgagggactaacatgacaatattaacgaaacattttaacat |
63 |
Q |
| |
|
|||||||| || ||||||||||||||||| ||||||||||||||| |
|
|
| T |
29686640 |
tatattgaaagattaacatgacaatattaatgaaacattttaacat |
29686685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 14)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 14984479 - 14984407
Alignment:
| Q |
102 |
tattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaacaaaatgactatta |
174 |
Q |
| |
|
|||||| |||||| |||| ||||| |||||||||||||||| |||||| |||||||| |||||||||||||| |
|
|
| T |
14984479 |
tattttgaaatttcgatatattgagggactattgtgactactcgttacacattcaggaccaaaatgactatta |
14984407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 51889822 - 51889754
Alignment:
| Q |
110 |
aattttgatacattgatagactattgtgactactggttacatattcag-gaacaaaatgactattaccc |
177 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||| |||||| || ||||||||||||||||| |
|
|
| T |
51889822 |
aattttgatacattgaaagactattgtgactactccttacacattcagagatcaaaatgactattaccc |
51889754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 38989805 - 38989763
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgacta |
141 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
38989805 |
gactattttaaaattttgatacattgatggactattgtgacta |
38989763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 134
Target Start/End: Complemental strand, 45681277 - 45681163
Alignment:
| Q |
21 |
attgagggactaacatgacaatattaacgaaacattttaacataaaagaccattttgacagatgtagtacacaat-gttgactattttaaaattttgata |
119 |
Q |
| |
|
|||| |||||||| |||| |||||||| ||||||||||||||||| |||| ||||||| || ||| |||||| ||||||||| ||||||||||| |
|
|
| T |
45681277 |
attgggggactaatatgataatattaaagaaacattttaacataagagactattttgattaatatagcgcacaatcaaggactattttgaaattttgata |
45681178 |
T |
|
| Q |
120 |
cattgatagactatt |
134 |
Q |
| |
|
|||||| |||||||| |
|
|
| T |
45681177 |
cattgagagactatt |
45681163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 30843834 - 30843911
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaa-caaaatgactattac |
175 |
Q |
| |
|
||||||||| |||||||||||||| | ||||||||||||||||| ||||| ||||||||| |||| |||||||||| |
|
|
| T |
30843834 |
gactattttggaattttgatacattaagagactattgtgactactcattacacattcaggaaccaaagtgactattac |
30843911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 14194953 - 14195033
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaacaaaatgactattaccccg |
179 |
Q |
| |
|
||||||||| ||||||||||||||| | |||||||||| ||||| | ||| |||| ||| ||||||||||||||||||| |
|
|
| T |
14194953 |
gactattttgaaattttgatacattaaaggactattgtggctactaggcacacattcgggatcaaaatgactattaccccg |
14195033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 17573228 - 17573297
Alignment:
| Q |
109 |
aaattttgatacattgatagactattgtgactactggttacatattcaggaa-caaaatgactattaccccg |
179 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||| ||| |||||||||||| |||||| |||||||||||| |
|
|
| T |
17573228 |
aaatttcgatacattgatagactattatgactac--gttgcatattcaggaaccaaaataactattaccccg |
17573297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 31186504 - 31186453
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttaca |
150 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||||| |||||| |||||| |
|
|
| T |
31186504 |
gactattttgaaattttgatacattgaaagactattgtaactacttgttaca |
31186453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 23152216 - 23152164
Alignment:
| Q |
18 |
tatattgagggactaacatgacaatattaacgaaacattttaacataaaagac |
70 |
Q |
| |
|
|||||| ||||||||| ||| |||| |||||||||||||||||| |||||||| |
|
|
| T |
23152216 |
tatattaagggactaatatgtcaattttaacgaaacattttaacgtaaaagac |
23152164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 46848400 - 46848480
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattca-ggaacaaaatgactattacccc |
178 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||| |||||||| ||||| ||||| ||| |||| ||||||||||||| |
|
|
| T |
46848400 |
gactattttgaaattttgatacattgaggaactattttgactactcattacacattcagggaccaaagtgactattacccc |
46848480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 23195755 - 23195805
Alignment:
| Q |
102 |
tattttaaaattttgatacattgatagactattgtgactactggttacata |
152 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||||| ||||| |||||||| |
|
|
| T |
23195755 |
tattttaaaattttaatacattgaaagactattgtagctactcgttacata |
23195805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 50239830 - 50239756
Alignment:
| Q |
102 |
tattttaaaattttgatacattgatagactattgtgactactggttacatattcaggaacaaaatgactattacc |
176 |
Q |
| |
|
||||||| |||||| ||||| ||| ||| |||| |||||| | |||||||||||||| |||||| ||||||||| |
|
|
| T |
50239830 |
tattttagaattttaatacactgagagattattatgactatttattacatattcaggaccaaaataactattacc |
50239756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 621889 - 621963
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattcag-gaacaaaatgactatta |
174 |
Q |
| |
|
||||||||| |||||||||||||||| |||||||| |||||||| ||||| |||||| || |||| ||||||||| |
|
|
| T |
621889 |
gactattttgaaattttgatacattg--agactattatgactactcattacacattcagagaccaaagtgactatta |
621963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 12832220 - 12832281
Alignment:
| Q |
17 |
gtatattgagggactaacatgacaatattaacgaaacattttaacataaaagaccattttga |
78 |
Q |
| |
|
||||||||| ||||| | ||||||||||||| ||| |||||||| |||| |||| ||||||| |
|
|
| T |
12832220 |
gtatattgaaggacttatatgacaatattaatgaagcattttaatataagagactattttga |
12832281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 7165776 - 7165827
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttaca |
150 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||||||||||||||| |||||| |
|
|
| T |
7165776 |
gactattttaaaattttaatacattgaaagactattgtgactactcgttaca |
7165827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 40124336 - 40124261
Alignment:
| Q |
103 |
attttaaaattttgatacattgatagactattgtgactactggttacatattc-aggaacaaaatgactattaccc |
177 |
Q |
| |
|
|||||||||||| |||||||| || |||||||||||||||| |||||| |||| |||| |||| |||||||||||| |
|
|
| T |
40124336 |
attttaaaatttcgatacattaatggactattgtgactactcgttacacattcaaggaccaaagtgactattaccc |
40124261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 43503032 - 43503107
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactactggttacatattca-ggaacaaaatgactatt |
173 |
Q |
| |
|
||||||||||||||||| ||||||||| | |||||||| |||||| |||||||||| | |||| |||||||||||| |
|
|
| T |
43503032 |
gactattttaaaattttaatacattgaaaaactattgtaactactcgttacatattaagggaaaaaaatgactatt |
43503107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 21603567 - 21603508
Alignment:
| Q |
20 |
tattgagggactaacatgacaatattaacgaaacattttaacataaaagaccattttgac |
79 |
Q |
| |
|
|||||| | |||||||||||||||||||||||| ||||||| || |||||| |||||||| |
|
|
| T |
21603567 |
tattgaagaactaacatgacaatattaacgaaatattttaatatcaaagactattttgac |
21603508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 6788517 - 6788594
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgactactggttacata-ttcaggaacaaaatgactattacc |
176 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |||||| | |||||| | || |||| ||||||||||||||| |
|
|
| T |
6788517 |
actattttaaaattttgatacattgaatgactattatgactatttgttacacatttaaggatgaaaatgactattacc |
6788594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 12676540 - 12676496
Alignment:
| Q |
17 |
gtatattgagggactaacatgacaatattaacgaaacattttaac |
61 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
12676540 |
gtatattgagggactaatatgacaatattaataaaacattttaac |
12676496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 34883974 - 34883934
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgac |
139 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
34883974 |
gactattttaaaattttgatacattgagggactattgtgac |
34883934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 18903200 - 18903250
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgactactggttaca |
150 |
Q |
| |
|
||||||||| ||||| |||||||||| |||||||||||||||| |||||| |
|
|
| T |
18903200 |
actattttagaatttcgatacattgaatgactattgtgactactcgttaca |
18903250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 23359502 - 23359368
Alignment:
| Q |
18 |
tatattgagggactaacatgacaatattaacgaaacattttaacataaaagaccattttgacagatgtagtacacaat-gttgactattttaaaattttg |
116 |
Q |
| |
|
|||||| ||||||| | ||||||||| |||| |||||||||||| | | |||| |||||||| | |||||||||||| | |||||| ||| ||||| |
|
|
| T |
23359502 |
tatattaagggactgatatgacaatagtaacaaaacattttaacgttagagactattttgactaacgtagtacacaatcatagactatattataatttca |
23359403 |
T |
|
| Q |
117 |
atac-attgatagactattgtgactactggttaca |
150 |
Q |
| |
|
|||| ||||| |||||||||||||| | |||||| |
|
|
| T |
23359402 |
atacaattgaaggactattgtgactattcgttaca |
23359368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 35150423 - 35150373
Alignment:
| Q |
100 |
actattttaaaattttgatacattgatagactattgtgactactggttaca |
150 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||||| ||||| |||||| |
|
|
| T |
35150423 |
actattttaaaattttgatgcattgagagactattgtagctacttgttaca |
35150373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0329 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0329
Description:
Target: scaffold0329; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 6272 - 6228
Alignment:
| Q |
99 |
gactattttaaaattttgatacattgatagactattgtgactact |
143 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
6272 |
gactattttaaaattttgatacattgatggactattgggactact |
6228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 349146 - 349205
Alignment:
| Q |
20 |
tattgagggactaacatgacaatattaacgaaacattttaacataaaagaccattttgac |
79 |
Q |
| |
|
|||||| | |||||||||||||||||||||||| ||||||| || |||||| |||||||| |
|
|
| T |
349146 |
tattgaagaactaacatgacaatattaacgaaatattttaatatcaaagactattttgac |
349205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 29396 - 29455
Alignment:
| Q |
20 |
tattgagggactaacatgacaatattaacgaaacattttaacataaaagaccattttgac |
79 |
Q |
| |
|
|||||| | |||||||||||||||||||||||| || |||| || |||||| |||||||| |
|
|
| T |
29396 |
tattgaagaactaacatgacaatattaacgaaatatattaatatcaaagactattttgac |
29455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0687 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0687
Description:
Target: scaffold0687; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 1650 - 1609
Alignment:
| Q |
102 |
tattttaaaattttgatacattgatagactattgtgactact |
143 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
1650 |
tattttaaaattttgatacattgaaagactattccgactact |
1609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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