View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12590_high_34 (Length: 236)
Name: NF12590_high_34
Description: NF12590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12590_high_34 |
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Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 42701586 - 42701800
Alignment:
| Q |
6 |
gagaagcaaaggacagaaagactaacgttaaaaaatttgaaacttgtgactcgtgagctgtgagacatagcagcagcacacaacactgatattgtcacat |
105 |
Q |
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| T |
42701586 |
gagaaccaaaagacagaaagactaacgttaaaaaatttgaaacttgtgactcgtgagctgtgagacatagcagcagcacacaacactgatattggcacat |
42701685 |
T |
|
| Q |
106 |
aaacattagtagtgattttaaaaggaaaaaagtgataggttataaccagcaagtgtttgtgttgtatgtatatcaggcagcgtagagtgtcgaacatgtc |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |
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| T |
42701686 |
aaacattagtagtgattttaaaaggaaaaaagtgataggttataaccagcaagtgtttgtgtcgtgtgtatatcaggcagcgtagagtgtcgaacatgtc |
42701785 |
T |
|
| Q |
206 |
ttttacctaaattct |
220 |
Q |
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||||||||||||||| |
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| T |
42701786 |
ttttacctaaattct |
42701800 |
T |
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