View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12591_low_10 (Length: 323)
Name: NF12591_low_10
Description: NF12591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12591_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 16374522 - 16374712
Alignment:
| Q |
19 |
tttaaaacttagaagccgtataaaaatatatagtgtttgtgcacatatttgtgtgagaaaatcatttctcaataagtaaaagtatatgctgaaattttaa |
118 |
Q |
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| T |
16374522 |
tttaaaacttagaatccgtataaa--tatacagtgtttgtgcacatatttgtgtgagaaaatcatttctcaataagtaaaagtatatgctgaaattttaa |
16374619 |
T |
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| Q |
119 |
catgagatattcatatatacttcctactgaatcatattatttgtcattgtttttggtttcaactgggagagcagtggtataattctttgcgaa |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
16374620 |
catgagatattcatatatacttcctactgaatcatattatttgtcattgtttttggtttcaactgggagagcagtggtataattcttcgcgaa |
16374712 |
T |
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