View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12591_low_22 (Length: 206)

Name: NF12591_low_22
Description: NF12591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12591_low_22
NF12591_low_22
[»] chr7 (33 HSPs)
chr7 (18-193)||(30226816-30226991)
chr7 (98-193)||(12560530-12560625)
chr7 (99-193)||(48796938-48797030)
chr7 (102-193)||(3285621-3285712)
chr7 (98-189)||(14976184-14976273)
chr7 (98-189)||(15405660-15405749)
chr7 (99-159)||(11629408-11629468)
chr7 (98-189)||(11559819-11559910)
chr7 (105-190)||(7620832-7620917)
chr7 (98-178)||(4793892-4793971)
chr7 (98-194)||(9567660-9567755)
chr7 (99-194)||(19353885-19353979)
chr7 (94-194)||(19295521-19295620)
chr7 (101-194)||(4541961-4542053)
chr7 (102-147)||(42783568-42783613)
chr7 (132-194)||(14688082-14688144)
chr7 (98-148)||(2077305-2077354)
chr7 (152-194)||(12326582-12326624)
chr7 (152-194)||(16207228-16207270)
chr7 (99-148)||(2083724-2083772)
chr7 (132-189)||(26193667-26193724)
chr7 (99-167)||(15711758-15711825)
chr7 (152-194)||(10661632-10661674)
chr7 (152-194)||(14927415-14927457)
chr7 (152-194)||(15350881-15350923)
chr7 (152-186)||(16221920-16221954)
chr7 (152-194)||(20924454-20924496)
chr7 (152-194)||(20992313-20992355)
chr7 (152-194)||(21261200-21261242)
chr7 (152-194)||(23082123-23082165)
chr7 (152-194)||(23960795-23960837)
chr7 (152-194)||(26132302-26132344)
chr7 (152-194)||(29545488-29545530)
[»] chr5 (20 HSPs)
chr5 (98-193)||(17920104-17920199)
chr5 (98-193)||(34404749-34404844)
chr5 (98-193)||(26182550-26182645)
chr5 (99-186)||(7897233-7897320)
chr5 (97-193)||(20497466-20497562)
chr5 (97-193)||(20287309-20287405)
chr5 (99-177)||(17660759-17660836)
chr5 (99-178)||(20127725-20127803)
chr5 (97-194)||(20740276-20740372)
chr5 (97-148)||(11205525-11205575)
chr5 (152-194)||(22082038-22082080)
chr5 (152-194)||(23624611-23624653)
chr5 (152-194)||(26037547-26037589)
chr5 (152-194)||(30605038-30605080)
chr5 (152-193)||(22404108-22404149)
chr5 (98-194)||(22183612-22183707)
chr5 (152-194)||(22251388-22251430)
chr5 (153-194)||(23757605-23757646)
chr5 (153-194)||(23823061-23823102)
chr5 (101-149)||(22130201-22130248)
[»] chr3 (20 HSPs)
chr3 (97-193)||(8749787-8749883)
chr3 (98-193)||(9037453-9037548)
chr3 (99-193)||(9030738-9030832)
chr3 (99-186)||(11560808-11560895)
chr3 (97-180)||(7478478-7478560)
chr3 (97-194)||(7495241-7495337)
chr3 (98-194)||(13920273-13920368)
chr3 (97-194)||(17042053-17042149)
chr3 (98-169)||(3444348-3444418)
chr3 (99-194)||(8225853-8225944)
chr3 (98-194)||(13914548-13914643)
chr3 (99-163)||(14406000-14406063)
chr3 (100-194)||(18477864-18477954)
chr3 (99-194)||(214390-214484)
chr3 (99-194)||(15674133-15674227)
chr3 (152-194)||(286247-286289)
chr3 (152-194)||(6578896-6578938)
chr3 (152-194)||(13514965-13515007)
chr3 (152-194)||(18063554-18063596)
chr3 (152-189)||(28051913-28051950)
[»] chr1 (15 HSPs)
chr1 (99-193)||(11084976-11085070)
chr1 (99-189)||(17038982-17039072)
chr1 (99-193)||(33063133-33063227)
chr1 (95-193)||(40312536-40312634)
chr1 (98-193)||(45598646-45598741)
chr1 (98-193)||(52436132-52436227)
chr1 (98-194)||(12753830-12753925)
chr1 (152-193)||(20200436-20200477)
chr1 (98-158)||(18389409-18389468)
chr1 (132-195)||(8282689-8282752)
chr1 (98-161)||(16950670-16950732)
chr1 (97-194)||(22347919-22348012)
chr1 (152-194)||(25349576-25349618)
chr1 (152-194)||(26971745-26971787)
chr1 (133-169)||(18379421-18379457)
[»] chr2 (16 HSPs)
chr2 (99-191)||(18605913-18606005)
chr2 (99-193)||(29566760-29566854)
chr2 (99-193)||(13314282-13314376)
chr2 (99-193)||(18766426-18766520)
chr2 (99-176)||(20068793-20068870)
chr2 (98-194)||(27108213-27108308)
chr2 (98-177)||(25347929-25348007)
chr2 (104-191)||(27111805-27111891)
chr2 (114-194)||(24311163-24311242)
chr2 (96-194)||(36397785-36397879)
chr2 (132-177)||(20645621-20645666)
chr2 (54-99)||(26983621-26983666)
chr2 (152-190)||(15329094-15329132)
chr2 (108-194)||(19197637-19197722)
chr2 (152-194)||(21249545-21249587)
chr2 (152-194)||(24789506-24789548)
[»] chr6 (25 HSPs)
chr6 (98-193)||(16136896-16136991)
chr6 (95-193)||(9385362-9385460)
chr6 (99-193)||(32452735-32452829)
chr6 (99-189)||(19216706-19216796)
chr6 (99-189)||(12444063-12444153)
chr6 (99-193)||(15002477-15002571)
chr6 (99-189)||(20003835-20003925)
chr6 (97-194)||(16308663-16308760)
chr6 (99-194)||(18152054-18152148)
chr6 (97-194)||(21316888-21316982)
chr6 (98-189)||(24542429-24542519)
chr6 (97-194)||(34639502-34639595)
chr6 (152-194)||(12385205-12385247)
chr6 (152-194)||(13196094-13196136)
chr6 (152-194)||(21722755-21722797)
chr6 (152-194)||(25806178-25806220)
chr6 (152-194)||(15930195-15930237)
chr6 (152-194)||(17235364-17235406)
chr6 (152-194)||(19077913-19077955)
chr6 (152-194)||(19598451-19598493)
chr6 (96-162)||(21727936-21728001)
chr6 (152-194)||(23879655-23879697)
chr6 (152-194)||(23882045-23882087)
chr6 (153-194)||(11961239-11961280)
chr6 (98-194)||(28624581-28624676)
[»] chr4 (28 HSPs)
chr4 (98-193)||(11324584-11324679)
chr4 (99-193)||(24143881-24143975)
chr4 (101-193)||(19894132-19894224)
chr4 (100-193)||(46738580-46738673)
chr4 (98-193)||(22555721-22555817)
chr4 (99-191)||(23541992-23542084)
chr4 (99-190)||(15687016-15687107)
chr4 (98-189)||(25353950-25354041)
chr4 (97-194)||(31971684-31971780)
chr4 (99-185)||(16654590-16654675)
chr4 (151-193)||(11905837-11905879)
chr4 (97-183)||(33746701-33746786)
chr4 (132-177)||(18006082-18006127)
chr4 (99-194)||(10197541-10197637)
chr4 (154-194)||(10718245-10718285)
chr4 (154-194)||(10932014-10932054)
chr4 (152-194)||(9069714-9069756)
chr4 (114-194)||(10683017-10683093)
chr4 (98-194)||(10723057-10723149)
chr4 (114-194)||(10896657-10896733)
chr4 (98-194)||(10936826-10936918)
chr4 (152-194)||(18601007-18601049)
chr4 (152-189)||(15623211-15623248)
chr4 (132-193)||(33744242-33744303)
chr4 (152-193)||(41786204-41786245)
chr4 (152-184)||(10724977-10725009)
chr4 (152-184)||(10938746-10938778)
chr4 (154-194)||(49975018-49975058)
[»] chr8 (12 HSPs)
chr8 (96-193)||(8730678-8730775)
chr8 (99-193)||(17880055-17880149)
chr8 (99-193)||(33465478-33465571)
chr8 (101-193)||(17280635-17280727)
chr8 (99-193)||(18676537-18676631)
chr8 (98-193)||(37154841-37154935)
chr8 (97-189)||(39081658-39081750)
chr8 (99-193)||(22876765-22876859)
chr8 (98-194)||(23250487-23250582)
chr8 (101-176)||(12376190-12376264)
chr8 (152-194)||(18622431-18622473)
chr8 (98-194)||(1684725-1684820)
[»] scaffold0328 (1 HSPs)
scaffold0328 (101-191)||(16290-16380)
[»] scaffold0022 (1 HSPs)
scaffold0022 (98-189)||(3872-3963)
[»] scaffold0143 (1 HSPs)
scaffold0143 (99-193)||(37045-37139)
[»] scaffold0645 (1 HSPs)
scaffold0645 (99-186)||(1800-1887)
[»] scaffold0034 (1 HSPs)
scaffold0034 (97-194)||(50203-50299)
[»] scaffold0520 (2 HSPs)
scaffold0520 (101-194)||(5737-5829)
scaffold0520 (132-194)||(11992-12054)
[»] scaffold0064 (2 HSPs)
scaffold0064 (99-194)||(45263-45357)
scaffold0064 (98-194)||(52236-52331)
[»] scaffold0032 (1 HSPs)
scaffold0032 (99-193)||(103654-103749)
[»] scaffold0480 (1 HSPs)
scaffold0480 (98-194)||(11950-12045)
[»] scaffold0423 (1 HSPs)
scaffold0423 (98-177)||(14348-14426)
[»] scaffold0129 (1 HSPs)
scaffold0129 (152-194)||(16275-16317)
[»] scaffold1001 (1 HSPs)
scaffold1001 (152-194)||(732-774)
[»] scaffold0190 (1 HSPs)
scaffold0190 (152-190)||(15968-16006)
[»] scaffold0185 (1 HSPs)
scaffold0185 (152-194)||(1715-1757)
[»] scaffold0103 (1 HSPs)
scaffold0103 (152-194)||(25025-25067)
[»] scaffold0006 (1 HSPs)
scaffold0006 (152-194)||(88516-88558)
[»] scaffold0035 (1 HSPs)
scaffold0035 (152-184)||(38085-38117)


Alignment Details
Target: chr7 (Bit Score: 156; Significance: 4e-83; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 18 - 193
Target Start/End: Complemental strand, 30226991 - 30226816
Alignment:
Q  18 gagaaggcttaagtttgtttagaaagatatttaagtaatctatcatgtcagcctacttaagtaaatataactaatattatttgttggatatttgtatatt 117  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30226991 gagaaggcttaagtttgtttagaaggatatttaagtaatctatcaggtcagcctacttaagtaaatataactaatattatttgttggatatttgtatatt 30226892  T
Q  118 ggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  30226891 ggcttcacttttgcctaaaacaaatattcatgggagatgttggacacgatgtgccaacatcctggcatgattcagt 30226816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 12560530 - 12560625
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||    
T  12560530 ttgttggatatttgtatattgacttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagt 12560625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 48796938 - 48797030
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||| | |||||||||||||||||||||||||||||||    
T  48796938 tgttggatatttgtatattggcttcacttttgcctaaaataaatattcat--gagatgttgaacacgatgtgccaacatcctggcatggttcagt 48797030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 102 - 193
Target Start/End: Original strand, 3285621 - 3285712
Alignment:
Q  102 tggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| | ||||| |||||||||||||||||||||||||    
T  3285621 tggatatttgtatattgacttcacttttgcctaaaacaaatatttatgtgagatgttgaacacgatatgccaacatcctggcatggttcagt 3285712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 14976273 - 14976184
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggtt 189  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||| | |||||||||||| ||||||||||||||    
T  14976273 ttgttggatatttgtatattggcttcactttttcctaaaacaaatattc--gagagatgttgaacacgatgtgccaatatcctggcatggtt 14976184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 15405749 - 15405660
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggtt 189  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||  | ||||||||| | |||||||||||| ||||||||||||||    
T  15405749 ttgttggatatttgtatattggcttcactttttcctaaaacaaatattc--gagagatgttgaacacgatgtgccaatatcctggcatggtt 15405660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 11629468 - 11629408
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttg 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11629468 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttg 11629408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 189
Target Start/End: Original strand, 11559819 - 11559910
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggtt 189  Q
    |||||||||||||| || ||||| ||| |||||||||||||||||||||| | ||||||||||| ||||||| |||| ||||||||||||||    
T  11559819 ttgttggatatttgaatgttggcctcatttttgcctaaaacaaatattcaagtgagatgttggacacgatgttccaatatcctggcatggtt 11559910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 105 - 190
Target Start/End: Complemental strand, 7620917 - 7620832
Alignment:
Q  105 atatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttc 190  Q
    |||||||||||||||||||| |||||||||||| ||||||||||| ||||||||  | |||||||| ||||||||||||| |||||    
T  7620917 atatttgtatattggcttcatttttgcctaaaataaatattcatgtgagatgttaaacacgatgtgtcaacatcctggcaaggttc 7620832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 4793892 - 4793971
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatc 178  Q
    ||||||||||||||| | |||||||||||||||| ||||||||||||||||| | ||||||||||||||||| ||||||||    
T  4793892 ttgttggatatttgtgtgttggcttcacttttgc-taaaacaaatattcatgtgtgatgttggatacgatgttccaacatc 4793971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 9567755 - 9567660
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||||||||||| | ||||| |||||||||| ||||||||||||||||| | ||||||||||||||||| |||||||||| |||  ||||||||    
T  9567755 ttgttggatatttgtgtgttggcctcacttttgc-taaaacaaatattcatgtgtgatgttggatacgatgttccaacatcctagcacagttcagtg 9567660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 99 - 194
Target Start/End: Complemental strand, 19353979 - 19353885
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||||||||||| |  ||| ||||||||||||||||||  ||| ||||||||||||| |||||||  ||||| |||||||||    
T  19353979 tgttggatatttgtatattggcttcattactgc-taaaacaaatattcatgcatgatattggatacgatgttccaacatgttggcacggttcagtg 19353885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 94 - 194
Target Start/End: Complemental strand, 19295620 - 19295521
Alignment:
Q  94 ttatttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||| |||||||||||||| | ||||||||| | |||| ||||||||||| |||||   ||||||||||||||||| |||||||| ||||| ||||||||    
T  19295620 ttatatgttggatatttgtgtgttggcttcattattgc-taaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagt 19295522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 194
Target Start/End: Original strand, 4541961 - 4542053
Alignment:
Q  101 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||| ||||||||  |||| | ||||||||| ||||||||||||||| | | ||||||||| || |||| ||||||||||||||||||||||||    
T  4541961 ttggctatttgtaagttggttgcacttttgc-taaaacaaatattcaagtgtgatgttggacaccatgttccaacatcctggcatggttcagtg 4542053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 42783613 - 42783568
Alignment:
Q  102 tggatatttgtatattggcttcacttttgcctaaaacaaatattca 147  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||    
T  42783613 tggatatttgtatgttggcttcacttttgcctaaaacaaatattca 42783568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 14688144 - 14688082
Alignment:
Q  132 ctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||||  ||||||||||||||||| |||||||  ||||| |||||||||    
T  14688144 ctaaaacaaatattcatgcatgatgttggatacgatgttccaacatgttggcacggttcagtg 14688082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 2077354 - 2077305
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcat 148  Q
    ||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  2077354 ttgttggatatttgtatgttggcttct-ttttgcctaaaacaaatattcat 2077305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 12326624 - 12326582
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||||||||| |||||||||    
T  12326624 agatgttggatacgatgttccaacatcctggcacggttcagtg 12326582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 16207228 - 16207270
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  16207228 agatgttggatatgatgttccaacatcctggcatggttcagtg 16207270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 2083772 - 2083724
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcat 148  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  2083772 tgttggatatttgtatgttggcttct-ttttgcctaaaacaaatattcat 2083724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 26193667 - 26193724
Alignment:
Q  132 ctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggtt 189  Q
    |||||||||||| |||||   ||||||||||||||||| |||||||| ||||||||||    
T  26193667 ctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcatggtt 26193724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 15711825 - 15711758
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgat 167  Q
    |||||| ||||||| ||||||||||| | |||| |||||||||||||||||   |||||||||||||||    
T  15711825 tgttgggtatttgtgtattggcttcattattgc-taaaacaaatattcatgtttgatgttggatacgat 15711758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 10661674 - 10661632
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||||| ||| |||||||||    
T  10661674 agatgttggatacgatgttccaacatcctagcacggttcagtg 10661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 14927457 - 14927415
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||||||||| |||| ||||    
T  14927457 agatgttggatacgatgttccaacatcctggcacggtttagtg 14927415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 15350923 - 15350881
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||||||||| |||| ||||    
T  15350923 agatgttggatacgatgttccaacatcctggcacggtttagtg 15350881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 186
Target Start/End: Original strand, 16221920 - 16221954
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatg 186  Q
    |||||||||||||||||| ||||||||||||||||    
T  16221920 agatgttggatacgatgttccaacatcctggcatg 16221954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 20924454 - 20924496
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||||||||| | |||||||    
T  20924454 agatgttggatacgatgttccaacatcctggcaagattcagtg 20924496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 20992355 - 20992313
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||| ||||| |||||||||||||| |||||||||    
T  20992355 agatgttggatatgatgttccaacatcctggcacggttcagtg 20992313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 21261242 - 21261200
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||| ||||| |||||||||||||| |||||||||    
T  21261242 agatgttggatatgatgttccaacatcctggcacggttcagtg 21261200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 23082123 - 23082165
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||| ||||| |||||||||||||| |||||||||    
T  23082123 agatgttggatatgatgttccaacatcctggcacggttcagtg 23082165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 23960837 - 23960795
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||||||||| | |||||||    
T  23960837 agatgttggatacgatgttccaacatcctggcacgattcagtg 23960795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 26132302 - 26132344
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||| ||||| |||||||||||||| |||||||||    
T  26132302 agatgttggatatgatgttccaacatcctggcacggttcagtg 26132344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 29545488 - 29545530
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||||||||| |||| |||||||||| |||||||||||||    
T  29545488 agatgttggatacaatgttccaacatcctagcatggttcagtg 29545530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 4e-40; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 17920104 - 17920199
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||    
T  17920104 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagt 17920199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 34404749 - 34404844
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||    
T  34404749 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagt 34404844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 26182550 - 26182645
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||| | |||||||||||||||||||||||||||||||    
T  26182550 ttgttggatatttgtatattgacttcacttttgcctaaaacaaatattcataggagatgttgaacacgatgtgccaacatcctggcatggttcagt 26182645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 99 - 186
Target Start/End: Original strand, 7897233 - 7897320
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatg 186  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| | |||||||| |||||||||||||||    
T  7897233 tgttggatatttgtatattggcgtcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgtcaacatcctggcatg 7897320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 97 - 193
Target Start/End: Original strand, 20497466 - 20497562
Alignment:
Q  97 tttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||| | | |||||||||||||| ||| ||||||||||    
T  20497466 tttgttggatatttttatattggcttcacttttgcctaaaataaatattcatgtgagatgttgtacaagatgtgccaacatcttggtatggttcagt 20497562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 97 - 193
Target Start/End: Complemental strand, 20287405 - 20287309
Alignment:
Q  97 tttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||||||||| |||||||||||||||  ||||| |||||||||   ||||||||| | |  ||||||||||||||||||||||||||||    
T  20287405 tttgttggatatttgtatgttggcttcacttttgtataaaataaatattcaaatgagatgttgaacataatgtgccaacatcctggcatggttcagt 20287309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 17660759 - 17660836
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacat 177  Q
    |||||||||||||||||||||||||| | |||| ||||||||||||||||||  ||||||||||||||||| |||||||    
T  17660759 tgttggatatttgtatattggcttcattattgc-taaaacaaatattcatgcatgatgttggatacgatgttccaacat 17660836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 20127803 - 20127725
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatc 178  Q
    |||||||||||||| | ||||| |||||||||| ||||||||||||||||   |||||||||||||||||| ||||||||    
T  20127803 tgttggatatttgtttgttggcctcacttttgc-taaaacaaatattcatttaagatgttggatacgatgttccaacatc 20127725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 20740276 - 20740372
Alignment:
Q  97 tttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||| | | ||| ||||| |||||| ||||||||||||||||| | |||||||||||| |||| |||||||||| |||  ||||||||    
T  20740276 tttgttggatatttatgtgttgacttcatttttgc-taaaacaaatattcatgtgtgatgttggatacaatgttccaacatcctagcacagttcagtg 20740372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 11205575 - 11205525
Alignment:
Q  97 tttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcat 148  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  11205575 tttgttggatatttgtatgttggcttct-ttttgcctaaaacaaatattcat 11205525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 22082038 - 22082080
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||||||||| |||||||||    
T  22082038 agatgttggatacgatgttccaacatcctggcacggttcagtg 22082080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 23624653 - 23624611
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||||||||| |||||||||    
T  23624653 agatgttggatacgatgttccaacatcctggcacggttcagtg 23624611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 26037589 - 26037547
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  26037589 agatgtcggatacgatgttccaacatcctggcatggttcagtg 26037547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 30605038 - 30605080
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||||||||| |||||||||    
T  30605038 agatgttggatacgatgttccaacatcctggcacggttcagtg 30605080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 22404108 - 22404149
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    ||||||||||||| |||| |||||||||||||||||||||||    
T  22404108 agatgttggatacaatgttccaacatcctggcatggttcagt 22404149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 194
Target Start/End: Original strand, 22183612 - 22183707
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||| ||||||  ||||||||||| || |  |||||||||||| |||||   ||||||||||||||||| |||| ||| ||||| |||||||||    
T  22183612 ttgttgggtatttgagtattggcttca-ttgtcactaaaacaaatactcatgtatgatgttggatacgatgttccaatatcttggcacggttcagtg 22183707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 22251388 - 22251430
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||  |||||||||||||| |||||||||    
T  22251388 agatgttggatacgatgctccaacatcctggcacggttcagtg 22251430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 23757605 - 23757646
Alignment:
Q  153 gatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||||||||||||| |||||||||||||| | |||||||    
T  23757605 gatgttggatacgatgttccaacatcctggcacgattcagtg 23757646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 23823061 - 23823102
Alignment:
Q  153 gatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||||||||||||| |||||||||||||| | |||||||    
T  23823061 gatgttggatacgatgttccaacatcctggcacgattcagtg 23823102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 22130201 - 22130248
Alignment:
Q  101 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatg 149  Q
    |||||||||||| | ||||||||||||||  ||||||||||||||||||    
T  22130201 ttggatatttgtgtgttggcttcactttt-tctaaaacaaatattcatg 22130248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 97 - 193
Target Start/End: Complemental strand, 8749883 - 8749787
Alignment:
Q  97 tttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | | |||||||||||||||||||||||||||||    
T  8749883 tttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacatgatgtgccaacatcctggcatggttcagt 8749787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 9037548 - 9037453
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||    
T  9037548 ttgttggatatttgtacattggtttcacttttgcctcaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagt 9037453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 9030738 - 9030832
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| | |||||||| ||||||||||||||||||||||    
T  9030738 tgttggatatttatatattggcttcacttttgcctaaaacaaatattcatgtgagatattgaacacgatgtgtcaacatcctggcatggttcagt 9030832  T

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Target: chr3; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 99 - 186
Target Start/End: Original strand, 11560808 - 11560895
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatg 186  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||||||| ||||||||| | ||||||||||||||||| ||||||    
T  11560808 tgttggatgtttgtatattggcttcacttttgcttaaaacgaatattcatgtgagatgttgaacacgatgtgccaacatccaggcatg 11560895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 97 - 180
Target Start/End: Original strand, 7478478 - 7478560
Alignment:
Q  97 tttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcct 180  Q
    |||||||||||||||| | ||||||| |||||||| ||||||||||||||||| | ||||||||||||||||| ||||||||||    
T  7478478 tttgttggatatttgtgtgttggctttacttttgc-taaaacaaatattcatgtgtgatgttggatacgatgttccaacatcct 7478560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 7495241 - 7495337
Alignment:
Q  97 tttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||| | |||||||||||||||| ||||||||||||||||| | ||||||||||||| |||  ||||||||| |||  ||||||||    
T  7495241 tttgttggatatttgtgtgttggcttcacttttgc-taaaacaaatattcatgtgtgatgttggatacgttgttacaacatcctagcacagttcagtg 7495337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 13920368 - 13920273
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||| ||||||||| | |||||||||||||||| ||||||||||||||||| | ||||||||||||||||| | |||||||| |||  ||||||||    
T  13920368 ttgttagatatttgtgtgttggcttcacttttgc-taaaacaaatattcatgtgtgatgttggatacgatgttctaacatcctagcacagttcagtg 13920273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 17042053 - 17042149
Alignment:
Q  97 tttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||| ||||||  ||||||||||| | |||| ||||||||||| |||||   ||||||||||||||||| || ||||||||||| |||||||||    
T  17042053 tttgttgggtatttgagtattggcttcattgttgc-taaaacaaatactcatgtatgatgttggatacgatgttccgacatcctggcacggttcagtg 17042149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 3444348 - 3444418
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgt 169  Q
    |||||||||||||||||||| || ||| | |||| ||||| |||||||||||| ||||||||||||||||||    
T  3444348 ttgttggatatttgtatattagcgtcattattgc-taaaataaatattcatgcaagatgttggatacgatgt 3444418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 194
Target Start/End: Complemental strand, 8225944 - 8225853
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||| ||||||  ||||||||||| |||||| ||||||||||| |||||    |||||||||||||||| |||||||| ||||| |||||||||    
T  8225944 tgttgggtatttgggtattggcttcatttttgc-taaaacaaatactcatgt---atgttggatacgatgttccaacatcttggcacggttcagtg 8225853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 13914643 - 13914548
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||| |||||||||   |||| ||||||||||| ||||| ||||||||||| | ||||||||||||||||| ||| |||||| |||  ||||||||    
T  13914643 ttgttagatatttgtgctttggtttcacttttgc-taaaataaatattcatgtgtgatgttggatacgatgttccatcatcctagcacagttcagtg 13914548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 14406000 - 14406063
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggata 163  Q
    ||||||||||||||||||||| || | | |||| |||||||||||||||||| ||||||||||||    
T  14406000 tgttggatatttgtatattggttttattattgc-taaaacaaatattcatgcaagatgttggata 14406063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 18477954 - 18477864
Alignment:
Q  100 gttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||| |||||| |||||||||||| | |||| ||||||||||| |||||    |||||||||||||||| |||||||| ||||| |||||||||    
T  18477954 gttgggtatttggatattggcttcattgttgc-taaaacaaatactcatgt---atgttggatacgatgttccaacatcttggcacggttcagtg 18477864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 214390 - 214484
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||| ||||||  ||||| ||||| | |||| ||||||||||| |||||   ||||||||||||||||| |||||||| ||||| |||||||||    
T  214390 tgttgggtatttgagtattgacttcattgttgc-taaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttcagtg 214484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 15674133 - 15674227
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||| ||||||  ||||| ||||| | |||| ||||||||||| |||||  |||||||||||||||||| |||||||| |||||  ||||||||    
T  15674133 tgttgggtatttgagtattgacttcattgttgc-taaaacaaatactcatgtaagatgttggatacgatgtcccaacatcttggcacagttcagtg 15674227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 286247 - 286289
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||||| ||| |||||||||    
T  286247 agatgttggatacgatgttccaacatcctagcacggttcagtg 286289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 6578896 - 6578938
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| ||||||||||| || |||||||||    
T  6578896 agatgttggatacgatgttccaacatcctgacacggttcagtg 6578938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 13514965 - 13515007
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||||| ||| |||||||||    
T  13514965 agatgttggatacgatgttccaacatcctagcacggttcagtg 13515007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 18063554 - 18063596
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||||||||||| || |||||||||||||| |||||||||    
T  18063554 agatgttggatacgacgttccaacatcctggcacggttcagtg 18063596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 28051950 - 28051913
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggtt 189  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  28051950 agatgttggatacgatgttccaacatcctggcacggtt 28051913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 4e-37; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 11084976 - 11085070
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||    
T  11084976 tgttggatatttatatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagt 11085070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 17039072 - 17038982
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggtt 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||| |||||||||    
T  17039072 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatccaggcatggtt 17038982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 33063227 - 33063133
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||    
T  33063227 tgttggatatttgtatattagcttcacttttgtctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagt 33063133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 95 - 193
Target Start/End: Original strand, 40312536 - 40312634
Alignment:
Q  95 tatttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    ||||||||||||||||||| |||||||||||||||||||||||  |||||||||| ||||||||| | | |||||||||||||||||||||||||||||    
T  40312536 tatttgttggatatttgtagattggcttcacttttgcctaaaattaatattcatgtgagatgttgtacaagatgtgccaacatcctggcatggttcagt 40312634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 45598646 - 45598741
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||||| ||||| |||||| ||||| |||||||||||||| ||| ||||||||| | |||||||||||||||||||||||||||||||    
T  45598646 ttgttggatatttgaatattagcttcatttttggctaaaacaaatatttatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagt 45598741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 52436132 - 52436227
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||| | ||||||||| | |||||||||||||||||| ||||||||||||    
T  52436132 ttgttggatatttgtatattggctttgtttttgcctaaaacaaatattcaagtgagatgttgaacacgatgtgccaacatccttgcatggttcagt 52436227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 12753925 - 12753830
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||| ||||||  | ||||||||| | |||| ||||||||||| ||||    ||||||||||||||||| |||||||||||||| |||||||||    
T  12753925 ttgttgggtatttgagtgttggcttcattgttgc-taaaacaaatactcatatatgatgttggatacgatgttccaacatcctggcacggttcagtg 12753830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 20200436 - 20200477
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||||||||| |||||||||||||| ||||||||    
T  20200436 agatgttggatacgatgttccaacatcctggcacggttcagt 20200477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Original strand, 18389409 - 18389468
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgtt 158  Q
    ||||||||||||||| ||||||| ||| | |||| |||||||||||||||||| |||||||    
T  18389409 ttgttggatatttgtgtattggcctcattattgc-taaaacaaatattcatgcaagatgtt 18389468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 8282752 - 8282689
Alignment:
Q  132 ctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtga 195  Q
    |||||||||||| |||||   ||||||||||||||||| ||||||||||| ||  |||||||||    
T  8282752 ctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcctgacacagttcagtga 8282689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 16950732 - 16950670
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttgga 161  Q
    ||||||||||||||||||||||| ||| | |||  ||||||||||||||| || ||||||||||    
T  16950732 ttgttggatatttgtatattggcctcattattg-ttaaaacaaatattcaagcaagatgttgga 16950670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 22347919 - 22348012
Alignment:
Q  97 tttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||| ||||||  ||||||||||| | |||| ||||||||||| |||||    |||||||||||||||| | |||||| ||||| |||||||||    
T  22347919 tttgttgggtatttgggtattggcttcattgttgc-taaaacaaatactcatgt---atgttggatacgatgttctaacatcttggcacggttcagtg 22348012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 25349576 - 25349618
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||| ||| | ||||||||||||||||||||||||    
T  25349576 agatgttggatatgatattccaacatcctggcatggttcagtg 25349618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 26971745 - 26971787
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||  |||||||||||||| |||||||||    
T  26971745 agatgttggatacgatgctccaacatcctggcacggttcagtg 26971787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 18379421 - 18379457
Alignment:
Q  133 taaaacaaatattcatgcgagatgttggatacgatgt 169  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  18379421 taaaaaaaatattcatgcaagatgttggatacgatgt 18379457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 6e-36; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 18605913 - 18606005
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttca 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||| |||||    
T  18605913 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatagttca 18606005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 29566854 - 29566760
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||| | ||||||||||| || ||||||||||||||||||||||||||||    
T  29566854 tgttggatatttatatgttggcttcacttttgcctaaaacaaatattcaagtgagatgttggacacaatgtgccaacatcctggcatggttcagt 29566760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 13314282 - 13314376
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||| | |||||||||||||| ||| ||||||||||    
T  13314282 tgttggatatttgtatgttggcttcacttttgcctaaaacaaatattcaagtgagatgttggacatgatgtgccaacatcttggaatggttcagt 13314376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 18766520 - 18766426
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||| | | ||||||||||||||||| |||||||||||    
T  18766520 tgttggatatttgtatattgacttcacttttgtctaaaacaaatattcatgtgagatgttgaacatgatgtgccaacatcctgccatggttcagt 18766426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 20068793 - 20068870
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaaca 176  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||| | ||||||||||||||    
T  20068793 tgttggatatttgtatattggcttcacttttgtctaaaacaaatatttatgtgagatgttgaaaacgatgtgccaaca 20068870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 27108308 - 27108213
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||||||||||||||||| ||||| | || | ||||| |||||||||| |  ||||||||||||||||| |||||||||||||| |||||||||    
T  27108308 ttgttggatatttgtatattgacttcattatttc-taaaataaatattcatacatgatgttggatacgatgttccaacatcctggcacggttcagtg 27108213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 25348007 - 25347929
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacat 177  Q
    ||||| ||||||| ||||||||| |||||||||| |||||||||||||||||| |||||||||||| ||| | |||||||    
T  25348007 ttgttagatatttatatattggcctcacttttgc-taaaacaaatattcatgcaagatgttggataagattttccaacat 25347929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 191
Target Start/End: Complemental strand, 27111891 - 27111805
Alignment:
Q  104 gatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttca 191  Q
    |||||||||||||||| |||| | |||| ||||||||||||||||    ||||||||||||||||| |||||||||||||| ||||||    
T  27111891 gatatttgtatattggtttcattattgc-taaaacaaatattcataaatgatgttggatacgatgttccaacatcctggcacggttca 27111805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 24311163 - 24311242
Alignment:
Q  114 tattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||||||| | |||| ||||||||||| |||||   |||||||||||| |||| |||||||||||||| |||||||||    
T  24311163 tattggcttcattgttgc-taaaacaaatactcatgtatgatgttggatacaatgttccaacatcctggcacggttcagtg 24311242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 194
Target Start/End: Original strand, 36397785 - 36397879
Alignment:
Q  96 atttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||||| ||||||  ||||||||||| | |||| ||||||||||| |||||    |||||||||||||||| |||||||| ||||| |||||||||    
T  36397785 atttgttgggtatttgggtattggcttcattgttgc-taaaacaaatactcatgt---atgttggatacgatgttccaacatcttggcacggttcagtg 36397879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 20645621 - 20645666
Alignment:
Q  132 ctaaaacaaatattcatgcgagatgttggatacgatgtgccaacat 177  Q
    |||||||||||||||||||  ||||||||||||||||| |||||||    
T  20645621 ctaaaacaaatattcatgcatgatgttggatacgatgttccaacat 20645666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 99
Target Start/End: Complemental strand, 26983666 - 26983621
Alignment:
Q  54 aatctatcatgtcagcctacttaagtaaatataactaatattattt 99  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||    
T  26983666 aatctatcaagtcagcctacctaagtaaatataacaaatattattt 26983621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Complemental strand, 15329132 - 15329094
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttc 190  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  15329132 agatgttggatacgatgttccaacatcctggcacggttc 15329094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 19197637 - 19197722
Alignment:
Q  108 tttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||||||||||||| | |||| ||||| |||||||||| |  ||||||||||| ||||| |||||||  | ||| |||||||||    
T  19197637 tttgtatattggcttcattattgc-taaaaaaaatattcatacttgatgttggatatgatgttccaacatgttagcacggttcagtg 19197722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 21249545 - 21249587
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||||||||| |||| ||||    
T  21249545 agatgttggatacgatgttccaacatcctggcacggtttagtg 21249587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 24789506 - 24789548
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||  |||||||||||||| |||||||||    
T  24789506 agatgttggatacgatgctccaacatcctggcacggttcagtg 24789548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 2e-35; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 16136896 - 16136991
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||||||    
T  16136896 ttgttggatatttgtatattggcttcacttttgccaaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctgtcatggttcagt 16136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 95 - 193
Target Start/End: Complemental strand, 9385460 - 9385362
Alignment:
Q  95 tatttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||  ||||||||||||    
T  9385460 tatttgttggatatttgtatattggattcacttttgcttaaaacaaatattcaagtgagatgttggacacgatgtgccaacatccctgcatggttcagt 9385362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 32452829 - 32452735
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||||||| ||| |||||||||||||||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  32452829 tgttggatatttgtatgttgccttcacttttgcctaaaataaatattcaagtgagatgttggacacgatgtgccaacatcctggcatggttcagt 32452735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 19216796 - 19216706
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggtt 189  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||| | |||||||||||| ||||||||||||||    
T  19216796 tgttggatatttgtctattggcttcacttttgcctaaaataaatattcatgtgagatgttgaacacgatgtgccaatatcctggcatggtt 19216706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 99 - 189
Target Start/End: Original strand, 12444063 - 12444153
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggtt 189  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| | | ||||||||||||| | |||||||||    
T  12444063 tgttggatatttgtatattggcttcacttttgcctaaaacgaatattcatgtgagatgttgaacatgatgtgccaacattcaggcatggtt 12444153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 15002477 - 15002571
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||||||| |||| |||  |||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||||||||||    
T  15002477 tgttggatatttgtatgttggtttcttttttgcctaaaacaaatattcaagtgagatgttggacacgatgtgccaacatcgtggcatggttcagt 15002571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 99 - 189
Target Start/End: Complemental strand, 20003925 - 20003835
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggtt 189  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||| | |||||||| ||||||||| ||||||||    
T  20003925 tgttggatatttgtatattggcttcacttttgcctaaaagaaatattcatgtgggatgttgaacacgatgtgtcaacatcctagcatggtt 20003835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 16308663 - 16308760
Alignment:
Q  97 tttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgcc-aacatcctggcatggttcagtg 194  Q
    |||||||||||||||| | |||||||||||||||| ||||||||||||||||| | ||||||||||||||||| || |||||||| |||  ||||||||    
T  16308663 tttgttggatatttgtgtgttggcttcacttttgc-taaaacaaatattcatgtgtgatgttggatacgatgttccaaacatcctagcacagttcagtg 16308760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 18152054 - 18152148
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||| |||||||||||||||||||| ||| |  |||||| ||||||||||||  ||||||||||||||||| | |||||  ||||| |||||||||    
T  18152054 tgttagatatttgtatattggcttc-cttatttctaaaataaatattcatgcatgatgttggatacgatgttctaacatgttggcacggttcagtg 18152148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 21316888 - 21316982
Alignment:
Q  97 tttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||| |||||||||  |||||||| | |||| |||||||||||||| ||   ||||||||||| ||||| ||||||||||||||| ||||||||    
T  21316888 tttgttgggtatttgtat--tggcttcattattgc-taaaacaaatattcttgtatgatgttggatatgatgttccaacatcctggcatagttcagtg 21316982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 24542519 - 24542429
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggtt 189  Q
    ||||||||||||||  ||||| ||||| | |||| ||||||||||| |||||   ||||||||||||||||| ||||||| |||||| ||||    
T  24542519 ttgttggatatttgagtattgacttcattgttgc-taaaacaaatactcatgtatgatgttggatacgatgttccaacattctggcacggtt 24542429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 34639502 - 34639595
Alignment:
Q  97 tttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||| |||||| |||||||||| | | |||| ||||||||||| |||||    |||||||||||||||| |||||||| ||||| |||||||||    
T  34639502 tttgttgggtatttggatattggctttattgttgc-taaaacaaatactcatgt---atgttggatacgatgttccaacatcttggcacggttcagtg 34639595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 12385205 - 12385247
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||||||||| |||||||||    
T  12385205 agatgttggatacgatgttccaacatcctggcacggttcagtg 12385247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 13196136 - 13196094
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||||||||| |||||||||    
T  13196136 agatgttggatacgatgttccaacatcctggcacggttcagtg 13196094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 21722755 - 21722797
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  21722755 agatgttggatacaatgttccaacatcctggcatggttcagtg 21722797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 25806220 - 25806178
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||||||||| |||||||||    
T  25806220 agatgttggatacgatgttccaacatcctggcacggttcagtg 25806178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 15930195 - 15930237
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||| ||||||||||||| |||||||||||||| |||||||||    
T  15930195 agatattggatacgatgttccaacatcctggcacggttcagtg 15930237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 17235406 - 17235364
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||  |||||||||||||| |||||||||    
T  17235406 agatgttggatacgatgctccaacatcctggcacggttcagtg 17235364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 19077955 - 19077913
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||| ||||| |||||||||    
T  19077955 agatgttggatacgatgttccaacatcttggcacggttcagtg 19077913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 19598493 - 19598451
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| ||||||||||| || |||||||||    
T  19598493 agatgttggatacgatgttccaacatcctgacacggttcagtg 19598451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 21728001 - 21727936
Alignment:
Q  96 atttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggat 162  Q
    |||||||| |||||||| | ||||||||||||| | |||||| ||||||||||| | ||||||||||    
T  21728001 atttgttgtatatttgtgtgttggcttcactttcg-ctaaaaaaaatattcatgtgtgatgttggat 21727936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 23879697 - 23879655
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||  |||||||||||||| |||||||||    
T  23879697 agatgttggatacgatgctccaacatcctggcacggttcagtg 23879655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 23882045 - 23882087
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| ||||||||||| || |||||||||    
T  23882045 agatgttggatacgatgttccaacatcctgacacggttcagtg 23882087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 11961280 - 11961239
Alignment:
Q  153 gatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||||||||||||| |||||||||||||| |||| ||||    
T  11961280 gatgttggatacgatgttccaacatcctggcacggtttagtg 11961239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 28624676 - 28624581
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||||||||||  || || ||||| | |||| ||||||||||| |||||   |||||||||||||| ||  ||||||| ||||| |||||||||    
T  28624676 ttgttggatatttgagtaatgacttcattgttgc-taaaacaaatactcatgtatgatgttggatacgacgtttcaacatcttggcacggttcagtg 28624581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 2e-35; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 11324584 - 11324679
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | | |||||||||||||| ||||||||||||||    
T  11324584 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgtacaagatgtgccaacatcttggcatggttcagt 11324679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 24143975 - 24143881
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||| | |||||||||||||||||||||||||||||||    
T  24143975 tgttggatatttgtatattgacttcacttttgcctaaaacaaatattcatatgagatgttgaacacgatgtgccaacatcctggcatggttcagt 24143881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 19894132 - 19894224
Alignment:
Q  101 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||| ||||||    
T  19894132 ttggatttttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatgattcagt 19894224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 100 - 193
Target Start/End: Original strand, 46738580 - 46738673
Alignment:
Q  100 gttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||||||    
T  46738580 gttggatatttgtatattgtcttcacttttacctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctgacatggttcagt 46738673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 98 - 193
Target Start/End: Complemental strand, 22555817 - 22555721
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggca-tggttcagt 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | | |||||||||||||| ||||| |||||||||    
T  22555817 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgtacaagatgtgccaacatcttggcattggttcagt 22555721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 99 - 191
Target Start/End: Complemental strand, 23542084 - 23541992
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttca 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | | |||||| ||||||| ||||||||||||    
T  23542084 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacaagatgtgtcaacatcatggcatggttca 23541992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 99 - 190
Target Start/End: Original strand, 15687016 - 15687107
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttc 190  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| | | ||||||| | ||||||| ||||||||||||||||||||    
T  15687016 tgttggatatttgtatgttggcttcacttttgcctaaaacaaatattcaagtgtgatgttgtacacgatgttccaacatcctggcatggttc 15687107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 189
Target Start/End: Original strand, 25353950 - 25354041
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggtt 189  Q
    ||||||||||||||||||||| ||||||||||||||||||  |||||||||| ||||||||| | ||||||||||||||||| |||||||||    
T  25353950 ttgttggatatttgtatattgccttcacttttgcctaaaatgaatattcatgtgagatgttgaacacgatgtgccaacatccaggcatggtt 25354041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 194
Target Start/End: Complemental strand, 31971780 - 31971684
Alignment:
Q  97 tttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||| | ||| |||||||||||| ||||| ||||||||||| | ||||||| ||||||||| |||||||||| |||  ||||||||    
T  31971780 tttgttggatatttgtgtgttgacttcacttttgc-taaaataaatattcatgtgtgatgttgtatacgatgttccaacatcctagcacagttcagtg 31971684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 16654590 - 16654675
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcat 185  Q
    |||||||||||||| ||||||||||| | |||| |||||||||||||||||   ||||||||||| | ||| |||||||| ||||||    
T  16654590 tgttggatatttgtgtattggcttcattattgc-taaaacaaatattcatgtacgatgttggatatgttgttccaacatcttggcat 16654675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 151 - 193
Target Start/End: Complemental strand, 11905879 - 11905837
Alignment:
Q  151 gagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    ||||||||||| ||||||| |||||||||||||||||||||||    
T  11905879 gagatgttggacacgatgttccaacatcctggcatggttcagt 11905837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 97 - 183
Target Start/End: Complemental strand, 33746786 - 33746701
Alignment:
Q  97 tttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggc 183  Q
    |||||||| ||||||  ||||||||||| | |||| ||||||||||| |||||   ||||||||||||||||| | |||||||||||    
T  33746786 tttgttgggtatttgagtattggcttcattgttgc-taaaacaaatactcatgtatgatgttggatacgatgttctaacatcctggc 33746701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 18006082 - 18006127
Alignment:
Q  132 ctaaaacaaatattcatgcgagatgttggatacgatgtgccaacat 177  Q
    |||||||||||||||||||  ||||||||||||||||| |||||||    
T  18006082 ctaaaacaaatattcatgcatgatgttggatacgatgttccaacat 18006127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 10197541 - 10197637
Alignment:
Q  99 tgttggatatttgtatattggcttcacttt-tgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||| ||||| |||| | || |  |||||||||||||||||    ||||||||||| ||||| |||||||| ||||| |||||||||    
T  10197541 tgttggatatttgtgtattgacttctcattattgctaaaacaaatattcatttatgatgttggatatgatgttccaacatcttggcacggttcagtg 10197637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 10718285 - 10718245
Alignment:
Q  154 atgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  10718285 atgttggatacgatgttccaacatcctggcacggttcagtg 10718245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 10932054 - 10932014
Alignment:
Q  154 atgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  10932054 atgttggatacgatgttccaacatcctggcacggttcagtg 10932014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 9069756 - 9069714
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||||||| | |||||||||    
T  9069756 agatgttggatacgatgttccaacatcctggaacggttcagtg 9069714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 194
Target Start/End: Complemental strand, 10683093 - 10683017
Alignment:
Q  114 tattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||||||| | |||| ||||||||||| |||||    |||||||||||||||| |||||||| ||||| |||||||||    
T  10683093 tattggcttcattgttgc-taaaacaaatactcatgt---atgttggatacgatgttccaacatcttggcacggttcagtg 10683017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 10723149 - 10723057
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||   ||||||||||| | |||| || |||||||| |||||    |||||||||||||||| |||||||| ||||| |||||||||    
T  10723149 ttgttggatatttcagtattggcttcattgttgc-tagaacaaatagtcatgt---atgttggatacgatgttccaacatcttggcacggttcagtg 10723057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 194
Target Start/End: Complemental strand, 10896733 - 10896657
Alignment:
Q  114 tattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||||||| | |||| ||||||||||| |||||    |||||||||||||||| |||||||| ||||| |||||||||    
T  10896733 tattggcttcattgttgc-taaaacaaatactcatgt---atgttggatacgatgttccaacatcttggcacggttcagtg 10896657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 10936918 - 10936826
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||   ||||||||||| | |||| || |||||||| |||||    |||||||||||||||| |||||||| ||||| |||||||||    
T  10936918 ttgttggatatttcagtattggcttcattgttgc-tagaacaaatagtcatgt---atgttggatacgatgttccaacatcttggcacggttcagtg 10936826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 18601007 - 18601049
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||  |||||||||||||| |||||||||    
T  18601007 agatgttggatacgatgctccaacatcctggcacggttcagtg 18601049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 15623248 - 15623211
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggtt 189  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  15623248 agatgttggatacgatgttccaacatcctggcacggtt 15623211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 33744303 - 33744242
Alignment:
Q  132 ctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||| |||||   ||||||||||| ||||| |||||||||| ||| ||||||||    
T  33744303 ctaaaacaaatactcatgtatgatgttggataagatgttccaacatcctagcacggttcagt 33744242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 41786245 - 41786204
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||| ||||| |||||||||||||| ||||||||    
T  41786245 agatgttggatatgatgttccaacatcctggcacggttcagt 41786204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 10725009 - 10724977
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggca 184  Q
    |||||||||||||||||| ||||||||||||||    
T  10725009 agatgttggatacgatgttccaacatcctggca 10724977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 10938778 - 10938746
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggca 184  Q
    |||||||||||||||||| ||||||||||||||    
T  10938778 agatgttggatacgatgttccaacatcctggca 10938746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 49975058 - 49975018
Alignment:
Q  154 atgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||| |||||||||||||| | |||||||    
T  49975058 atgttggatacgatgttccaacatcctggcacgattcagtg 49975018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 4e-34; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 96 - 193
Target Start/End: Complemental strand, 8730775 - 8730678
Alignment:
Q  96 atttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| | |||||||| ||||||||||||||||||||||    
T  8730775 atttcttggatatttgtatattgacttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgacaacatcctggcatggttcagt 8730678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 17880055 - 17880149
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||| | |||||||||||||||| ||||||||||||||    
T  17880055 tgttggatctttgtatattggcttcacttttgcctaaaacaaatatgcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcagt 17880149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 99 - 193
Target Start/End: Original strand, 33465478 - 33465571
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  33465478 tgttggatatttgtatgttggcttcacttttgcctaaaa-aaatattcaagtgagatgttggacacgatgtgccaacatcctggcatggttcagt 33465571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 17280727 - 17280635
Alignment:
Q  101 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | | |||||| ||||||| ||||||||||||||    
T  17280727 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacaagatgtgtcaacatcatggcatggttcagt 17280635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 18676631 - 18676537
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||| |||||||||||||||  ||||||||||||||||||||||||||||| |||||||||   |||||||||||||||||||||||||||||||    
T  18676631 tgttagatatttgtatattgatttcacttttgcctaaaacaaatattcatgtgagatgttgagcacgatgtgccaacatcctggcatggttcagt 18676537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 37154841 - 37154935
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    ||||||||||| ||||||||||||||| |||| ||||||||||||||| |||| |||||||| | |||||||||||||||||||||||||||||||    
T  37154841 ttgttggatatatgtatattggcttcatttttacctaaaacaaatattaatgc-agatgttgaacacgatgtgccaacatcctggcatggttcagt 37154935  T

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Target: chr8; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 97 - 189
Target Start/End: Complemental strand, 39081750 - 39081658
Alignment:
Q  97 tttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggtt 189  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| | |||  ||| |||||||||| |||||||    
T  39081750 tttgttggatatttgtatattggcttcacttttgcctaaaataaatattcatgtgagatgttgaacacggcgtgtcaacatcctgacatggtt 39081658  T

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Target: chr8; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 22876859 - 22876765
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    ||||| |||||| ||| |||||||||||||||||||||||||||||| | | ||||||||||| | ||||| |||||||||||||||||||||||    
T  22876859 tgttgaatatttatatgttggcttcacttttgcctaaaacaaatatttaagtgagatgttggacaagatgtcccaacatcctggcatggttcagt 22876765  T

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Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 23250582 - 23250487
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||| |||||||||| | |||||| ||||||| | || |||||||||||| | | ||| ||||| ||||||| ||||||||||||||||||||||||    
T  23250582 ttgtgggatatttgtgtgttggctgcactttttc-tacaacaaatattcaagtgtgatattggacacgatgttccaacatcctggcatggttcagtg 23250487  T

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Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 12376190 - 12376264
Alignment:
Q  101 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaaca 176  Q
    |||||||||||||| ||||| ||| | |||| |||||||||||||||||| |||||||||||| ||||| ||||||    
T  12376190 ttggatatttgtatgttggcctcattattgc-taaaacaaatattcatgcaagatgttggataagatgttccaaca 12376264  T

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Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 18622473 - 18622431
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||| ||||| |||||||||    
T  18622473 agatgttggatacgatgttccaacatcttggcacggttcagtg 18622431  T

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Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 1684820 - 1684725
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||||||||| | | |||||||||  ||| | ||||||||||||||||| |  ||||| |||||||||  |||||||||| |||  ||||||||    
T  1684820 ttgttggatatttttgtgttggcttcatattttc-taaaacaaatattcatgtgtcatgtttgatacgatgctccaacatcctagcacagttcagtg 1684725  T

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Target: scaffold0328 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 101 - 191
Target Start/End: Original strand, 16290 - 16380
Alignment:
Q  101 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttca 191  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| | |||||||||||||||||| ||||||||||    
T  16290 ttggatatttgtatattggcttcacttttgcctaaaataaatattcatgtgagatgttgaacacgatgtgccaacatcctagcatggttca 16380  T

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Target: scaffold0022 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 3963 - 3872
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggtt 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||| ||||||| | |||||||||    
T  3963 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaagacgatgtaccaacatacaggcatggtt 3872  T

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Target: scaffold0143 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 37139 - 37045
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||||||||||||||| |||||||||||||||||||||| ||  ||||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  37139 tgttggatatttgtatgttggcttcacttttgcctaaaaaaataattcaagtgagatgttggacacgatgtgccaacatcctggcatggttcagt 37045  T

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Target: scaffold0645 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0645
Description:

Target: scaffold0645; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 99 - 186
Target Start/End: Complemental strand, 1887 - 1800
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatg 186  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||||||| ||||||||| | ||||||||||||||||| ||||||    
T  1887 tgttggatgtttgtatattggcttcacttttgcttaaaacgaatattcatgtgagatgttgaacacgatgtgccaacatccaggcatg 1800  T

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Target: scaffold0034 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 50203 - 50299
Alignment:
Q  97 tttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||| | |||||||||||||||| ||||||||||||||||| | ||||||||||||||||| |||||||||| |||  ||||||||    
T  50203 tttgttggatatttgtgtgttggcttcacttttgc-taaaacaaatattcatgtgtgatgttggatacgatgttccaacatcctagcacagttcagtg 50299  T

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Target: scaffold0520 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 101 - 194
Target Start/End: Complemental strand, 5829 - 5737
Alignment:
Q  101 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||||||    ||||||||||| ||||| ||||||||||||||||||||||||    
T  5829 ttggatatttgaatattagcttcactttt-cctaaaacaaatattcatatatgatgttggatatgatgttccaacatcctggcatggttcagtg 5737  T

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Target: scaffold0520; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 12054 - 11992
Alignment:
Q  132 ctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||    ||||||||||| ||||| ||||||||||||||||||||||||    
T  12054 ctaaaacaaatattcatatatgatgttggatatgatgttccaacatcctggcatggttcagtg 11992  T

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Target: scaffold0064 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 99 - 194
Target Start/End: Original strand, 45263 - 45357
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||| | ||| |||||||||| | |||||||||||||||||   ||||||||||||||||| |||||||| |||||||||||||||    
T  45263 tgttggatatttgtgtgttgacttcactttttc-taaaacaaatattcatgtatgatgttggatacgatgttccaacatcttggcatggttcagtg 45357  T

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Target: scaffold0064; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 98 - 194
Target Start/End: Original strand, 52236 - 52331
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||||||||||| | ||||||||||||||||  ||||||||||||||||   ||||||||||||||||| |||||||| ||| | |||||||||    
T  52236 ttgttggatatttgtgtgttggcttcacttttgca-aaaacaaatattcatgtatgatgttggatacgatgttccaacatcttggtacggttcagtg 52331  T

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Target: scaffold0032 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 103749 - 103654
Alignment:
Q  99 tgttggatatttgtatattggcttcacttttgcctaaaacaaatattc-atgcgagatgttggatacgatgtgccaacatcctggcatggttcagt 193  Q
    |||| |||||||| || ||||||||||||||||||||||||||||||| | | ||||||||||||| || || || ||||||||||||||||||||    
T  103749 tgttcgatatttgaatgttggcttcacttttgcctaaaacaaatattcaaagtgagatgttggatatgacgttcctacatcctggcatggttcagt 103654  T

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Target: scaffold0480 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 12045 - 11950
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||||||||||||| ||| || ||||||||| ||||||||||| ||| | | ||||||||| |||||||  ||||||||||||| |||||||||    
T  12045 ttgttggatatttgtatgttgactgcacttttgc-taaaacaaataatcaagtgtgatgttggacacgatgtttcaacatcctggcacggttcagtg 11950  T

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Target: scaffold0423 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 98 - 177
Target Start/End: Complemental strand, 14426 - 14348
Alignment:
Q  98 ttgttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgcgagatgttggatacgatgtgccaacat 177  Q
    ||||||||||||||||| ||||| ||| | ||   |||||||||||||||||| |||||||||||||||||| |||||||    
T  14426 ttgttggatatttgtatgttggcctcattatttt-taaaacaaatattcatgcaagatgttggatacgatgttccaacat 14348  T

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Target: scaffold0129 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 16317 - 16275
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||||||||| |||||||||    
T  16317 agatgttggatacgatgttccaacatcctggcacggttcagtg 16275  T

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Target: scaffold1001 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 774 - 732
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| |||||||| ||||| |||||||||    
T  774 agatgttggatacgatgttccaacatcttggcacggttcagtg 732  T

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Target: scaffold0190 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 15968 - 16006
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttc 190  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  15968 agatgttggatacgatgttccaacatcctggcacggttc 16006  T

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Target: scaffold0185 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 1715 - 1757
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||| ||||||| |||||| |||||||||    
T  1715 agatgttggatacgatgttccaacattctggcacggttcagtg 1757  T

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Target: scaffold0103 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 25025 - 25067
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    |||||||||||||||||  |||||||||||||| |||||||||    
T  25025 agatgttggatacgatgctccaacatcctggcacggttcagtg 25067  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 88558 - 88516
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggcatggttcagtg 194  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||    
T  88558 agatgttggatacaatgttccaacatcctgacatggttcagtg 88516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 38117 - 38085
Alignment:
Q  152 agatgttggatacgatgtgccaacatcctggca 184  Q
    |||||||||||||||||| ||||||||||||||    
T  38117 agatgttggatacgatgttccaacatcctggca 38085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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