View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12591_low_23 (Length: 203)
Name: NF12591_low_23
Description: NF12591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12591_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 17 - 188
Target Start/End: Original strand, 3245091 - 3245260
Alignment:
| Q |
17 |
cagagagaagagttacaaggggaacattctaagtcagatagttgaagcatcagacacataggaggataaccctgaggtgataccagatatctctgtctga |
116 |
Q |
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| T |
3245091 |
cagagagaagagttacaaggggaacattctaagtcagatagttgaagcatcagacacataggaggatagccctgaggtgataccagatatctctgtctga |
3245190 |
T |
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| Q |
117 |
taatgctatacttagacacatattgtccttgacacacaatcaatagcaattgctcccgaaaaacatgatgtc |
188 |
Q |
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||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
3245191 |
taatgctatacttagacac--attgtccttgacacacgatcaatagcaattgctcccgaaaaacatgatgtc |
3245260 |
T |
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