View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12594_low_10 (Length: 352)
Name: NF12594_low_10
Description: NF12594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12594_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 20 - 340
Target Start/End: Original strand, 22769111 - 22769443
Alignment:
| Q |
20 |
cataatctgtaattttctgcgaaagtgcaattcgattttctgttccagtaacaaaacaccatagaaaagtgtatgtgaatgaggttgtccttgatgaagg |
119 |
Q |
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| T |
22769111 |
cataatctgtaattttctgcgaaagtgcaattcgattttctgttccagtaacaaaacaccatagaaaagtgtatgtgaatgaggttgtccttgatgaagg |
22769210 |
T |
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| Q |
120 |
agcattccaatacaaatagaagcaaaatgcattctagattattgtagtgtacaagaaccttcttcaacactttcttgataacctcttcagccttctcatt |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
22769211 |
agcattccaatacaaatagaagcaaaatgcattctagattattgtagtgtacaagaaccttcttcaacactttcttgataacctcttcagcattctcatt |
22769310 |
T |
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| Q |
220 |
ttctttggcagggagaaaaatagttggttcacttgtaggctttataataagttggagtcaa------------taagcatgactctcaatttctcttatt |
307 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |
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| T |
22769311 |
ttctttggcagggagaaaaatagttggttcacttgtaggctttataataagttggagtcaatcaatgttgcattaagaatgactctcaatttctcttatt |
22769410 |
T |
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| Q |
308 |
taatagcaaatgattcagaaaggaggcagtgaa |
340 |
Q |
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||||||||||||||||| ||||||||||||||| |
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| T |
22769411 |
taatagcaaatgattcaaaaaggaggcagtgaa |
22769443 |
T |
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