View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12594_low_15 (Length: 292)
Name: NF12594_low_15
Description: NF12594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12594_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 16 - 277
Target Start/End: Complemental strand, 25821742 - 25821481
Alignment:
| Q |
16 |
cactgattctctttgtataatggataagtttcattatcaaaaacccacttaccagaaaataagtcacattttgatgaagacaatgagtcaatagagacat |
115 |
Q |
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| T |
25821742 |
cactgattctctttgtataatggataagtttcattatcaaaaacccacttaccagaaaataagtcacattttgatgaagacaatgagtcaatagagacat |
25821643 |
T |
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| Q |
116 |
ttactttttgagatagtttttctcctctatcttgtgttaaataaattgttgtgataactaaaagagtggttaagatggctacaagagaatgaaagatgtt |
215 |
Q |
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| T |
25821642 |
ttactttttgagatagtttttctcctctatcttgtgttaaataaattgttgtgataactaaaagagtggttaagatggctacaagagaatgaaagatgtt |
25821543 |
T |
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| Q |
216 |
tttgattccccaaatacttcctattactactatttggtgtgcctttgctattgtcatttttg |
277 |
Q |
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| T |
25821542 |
tttgattccccaaatgcttcctattactactatttggtgtgcctttgctattgtcatttttg |
25821481 |
T |
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