View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12594_low_23 (Length: 240)
Name: NF12594_low_23
Description: NF12594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12594_low_23 |
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Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 8666688 - 8666922
Alignment:
| Q |
1 |
tgagtctcatgagctttgaattctttcatcaatgaaggctctatgttttcttccatcattgatttgccagaggtcaagggcatcatggtaaacgagtcgt |
100 |
Q |
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| T |
8666688 |
tgagtctcatgagctttgaattctttcatcaatgaaggctctatgttttcttccatcattgatttgccagaggtcaagggcatcatggtaaacgagtcgt |
8666787 |
T |
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| Q |
101 |
ccatcacatcagaaatctccacgtattgactggtggttataatctcatctgcactgaaaccaaaggatgcccggtaagcttctatttcttccacatcttg |
200 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8666788 |
ccattacatcagaaatctccacgtattgactggtggttataatctcatctgcactgaaaccaaaggatgcccggtaagcttctatttcttccacatcttg |
8666887 |
T |
|
| Q |
201 |
cttaggacttctagaaggcctactctgatgtccat |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
8666888 |
cttaggacttctagaaggcctactctgatgtccat |
8666922 |
T |
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