View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12595_low_40 (Length: 317)

Name: NF12595_low_40
Description: NF12595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12595_low_40
NF12595_low_40
[»] chr1 (16 HSPs)
chr1 (18-212)||(30043501-30043695)
chr1 (207-301)||(30043898-30043992)
chr1 (117-171)||(37047003-37047057)
chr1 (122-191)||(20999300-20999368)
chr1 (80-159)||(47360481-47360559)
chr1 (120-186)||(15581148-15581214)
chr1 (117-167)||(39964527-39964577)
chr1 (117-186)||(24857834-24857903)
chr1 (117-161)||(44417465-44417509)
chr1 (124-170)||(41470621-41470667)
chr1 (120-169)||(18928352-18928401)
chr1 (124-169)||(45232081-45232126)
chr1 (117-168)||(4824992-4825044)
chr1 (219-247)||(27820504-27820532)
chr1 (117-161)||(38939230-38939274)
chr1 (117-169)||(39012311-39012363)
[»] chr4 (12 HSPs)
chr4 (96-181)||(25434643-25434725)
chr4 (117-186)||(38206129-38206198)
chr4 (117-168)||(4686131-4686182)
chr4 (117-168)||(25414218-25414269)
chr4 (120-190)||(37980154-37980224)
chr4 (117-170)||(42281237-42281290)
chr4 (127-186)||(29195098-29195157)
chr4 (120-171)||(56409969-56410020)
chr4 (120-178)||(47183333-47183391)
chr4 (219-249)||(49803098-49803128)
chr4 (226-255)||(47399403-47399432)
chr4 (120-168)||(31141350-31141398)
[»] chr7 (9 HSPs)
chr7 (117-186)||(5579237-5579307)
chr7 (97-171)||(13585657-13585731)
chr7 (124-166)||(21050151-21050193)
chr7 (116-172)||(33128540-33128596)
chr7 (120-171)||(8677578-8677629)
chr7 (124-186)||(21035179-21035241)
chr7 (219-249)||(28210321-28210351)
chr7 (219-249)||(45593414-45593444)
chr7 (117-186)||(35328878-35328947)
[»] chr5 (8 HSPs)
chr5 (120-186)||(16172990-16173056)
chr5 (120-180)||(14656650-14656710)
chr5 (116-171)||(18351776-18351831)
chr5 (120-169)||(16247136-16247185)
chr5 (128-171)||(19373257-19373300)
chr5 (95-162)||(32340319-32340385)
chr5 (120-161)||(15485426-15485467)
chr5 (226-254)||(29845069-29845097)
[»] chr3 (12 HSPs)
chr3 (120-186)||(34844374-34844440)
chr3 (120-186)||(42799754-42799820)
chr3 (120-186)||(10682950-10683016)
chr3 (117-167)||(53167795-53167845)
chr3 (117-181)||(43303766-43303830)
chr3 (119-166)||(26158834-26158881)
chr3 (117-171)||(44069776-44069831)
chr3 (219-249)||(3845736-3845766)
chr3 (120-186)||(53863874-53863940)
chr3 (120-189)||(15034345-15034414)
chr3 (124-169)||(35623277-35623322)
chr3 (117-161)||(4252528-4252572)
[»] chr8 (7 HSPs)
chr8 (117-171)||(34778753-34778807)
chr8 (117-186)||(22268937-22269006)
chr8 (117-166)||(40136966-40137015)
chr8 (120-186)||(26688868-26688935)
chr8 (219-252)||(34236035-34236068)
chr8 (138-171)||(43533744-43533777)
chr8 (116-180)||(38463891-38463955)
[»] chr6 (4 HSPs)
chr6 (120-190)||(6691557-6691627)
chr6 (124-181)||(3869704-3869761)
chr6 (120-167)||(6384009-6384056)
chr6 (97-184)||(27869695-27869781)
[»] chr2 (11 HSPs)
chr2 (117-186)||(18825344-18825413)
chr2 (116-180)||(13747636-13747700)
chr2 (219-254)||(9174685-9174720)
chr2 (139-186)||(30359657-30359704)
chr2 (120-161)||(6099525-6099566)
chr2 (61-154)||(7250264-7250356)
chr2 (138-178)||(11852396-11852436)
chr2 (219-247)||(26143804-26143832)
chr2 (120-168)||(26482114-26482162)
chr2 (120-167)||(31681071-31681119)
chr2 (117-161)||(40591204-40591248)


Alignment Details
Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 30043501 - 30043695
Alignment:
Q  18 agaccaactaatatgagggaaccaatcctactgtctactagcaggggcccatttaaaaccaatatggactagcccttagaaattggcattgggaggattt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30043501 agaccaactaatatgagggaaccaatcctactgtctactagcaggggctcatttaaaaccaatatggactagcccttagaaattggcattgggaggattt 30043600  T
Q  118 caaacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtggattatataagtgattatgtataagct 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30043601 caaacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtgggttatataagtgattatgtataagct 30043695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 207 - 301
Target Start/End: Original strand, 30043898 - 30043992
Alignment:
Q  207 taagcttaaagtctgcaaataagttgtttatccaaacagggccataataaagtatgcacctttatatttgaaggggacaacttgattgaatcatt 301  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30043898 taagcttaaagtctgaaaataagttgtttatccaaacagggccataataaagtatgcacctttatatttgaaggggacaacttgattgaatcatt 30043992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 37047057 - 37047003
Alignment:
Q  117 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacaccacca 171  Q
    |||||||||||||||||| || |||||||||||||||| |||||| |||||||||    
T  37047057 tcaaacctgagaccttgagaggagcacactccaaggtcccaagccaacaccacca 37047003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 20999300 - 20999368
Alignment:
Q  122 cctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtggattat 191  Q
    ||||||| ||||| | |||||||||||||| || |||||||||||||||| ||||||||| |||||||||    
T  20999300 cctgagatcttgagaaaagcacactccaagatc-caagcctacaccaccaggtcaacccaagtggattat 20999368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 47360481 - 47360559
Alignment:
Q  80 tatggactagcccttagaaattggcattgggaggatttcaaacctgagaccttgatagaagcacactccaaggtctcaag 159  Q
    |||||||||||||  |||||||| || |||||||||| | ||||||||| ||||| || |||||||||||||||| ||||    
T  47360481 tatggactagcccgcagaaattgacactgggaggatt-cgaacctgagatcttgagaggagcacactccaaggtcccaag 47360559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 15581148 - 15581214
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtgg 186  Q
    ||||||||||||| | || |||||||||||||||| |||||| ||||||||| | ||||||| ||||    
T  15581148 aacctgagacctttagaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgg 15581214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 39964577 - 39964527
Alignment:
Q  117 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacacc 167  Q
    |||||||||||||||||| || |||||||||||||||| |||||| |||||    
T  39964577 tcaaacctgagaccttgagaggagcacactccaaggtcgcaagccaacacc 39964527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 186
Target Start/End: Original strand, 24857834 - 24857903
Alignment:
Q  117 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtgg 186  Q
    |||||||||||| ||||| |||||| |||||||||||| | |||| ||||||||| | ||||||| ||||    
T  24857834 tcaaacctgagagcttgagagaagcccactccaaggtccctagccaacaccaccaggccaacccaagtgg 24857903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 44417465 - 44417509
Alignment:
Q  117 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcc 161  Q
    |||||||||||||||||| || |||||||||||||||| ||||||    
T  44417465 tcaaacctgagaccttgagagcagcacactccaaggtcccaagcc 44417509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 41470621 - 41470667
Alignment:
Q  124 tgagaccttgatagaagcacactccaaggtctcaagcctacaccacc 170  Q
    ||||||||||| || |||| |||||||||||||||||| ||||||||    
T  41470621 tgagaccttgagaggagcatactccaaggtctcaagccaacaccacc 41470667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 18928401 - 18928352
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcctacaccac 169  Q
    ||||||||||||||| || ||||||||  ||||||||||||| |||||||    
T  18928401 aacctgagaccttgagaggagcacactttaaggtctcaagccaacaccac 18928352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 45232126 - 45232081
Alignment:
Q  124 tgagaccttgatagaagcacactccaaggtctcaagcctacaccac 169  Q
    ||||||||||| || ||| ||||||||||||| |||||||||||||    
T  45232126 tgagaccttgagaggagcgcactccaaggtcttaagcctacaccac 45232081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 4825044 - 4824992
Alignment:
Q  117 tcaaacctgagaccttgat-agaagcacactccaaggtctcaagcctacacca 168  Q
    ||||||||||||||||||  || |||||||||||||||| |||||| ||||||    
T  4825044 tcaaacctgagaccttgaagaggagcacactccaaggtcccaagccaacacca 4824992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 247
Target Start/End: Original strand, 27820504 - 27820532
Alignment:
Q  219 ctgcaaataagttgtttatccaaacaggg 247  Q
    |||||||||||||||||||||||||||||    
T  27820504 ctgcaaataagttgtttatccaaacaggg 27820532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 38939274 - 38939230
Alignment:
Q  117 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcc 161  Q
    ||||||| |||||||||| || |||||||||||||||| ||||||    
T  38939274 tcaaaccagagaccttgagaggagcacactccaaggtcccaagcc 38939230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 39012363 - 39012311
Alignment:
Q  117 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacaccac 169  Q
    |||||||| ||||||||| |  |||||||||||||||| |||||| |||||||    
T  39012363 tcaaacctaagaccttgagaagagcacactccaaggtcccaagccaacaccac 39012311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 25434643 - 25434725
Alignment:
Q  96 gaaattggcattgggaggatttcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaaccca 181  Q
    |||||||||| |||||| ||  ||||||||||||||||| ||||||||||||||||||| |||||| ||||||||| | |||||||    
T  25434643 gaaattggcaatgggagaat--caaacctgagaccttgagagaagcacactccaaggtcccaagcc-acaccaccaggccaaccca 25434725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 117 - 186
Target Start/End: Original strand, 38206129 - 38206198
Alignment:
Q  117 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtgg 186  Q
    |||||||||||||||||| || |||||||||||||||| ||||||  |||||||| ||||||||| ||||    
T  38206129 tcaaacctgagaccttgagaggagcacactccaaggtcccaagccagcaccaccaggtcaacccaagtgg 38206198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 4686131 - 4686182
Alignment:
Q  117 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacacca 168  Q
    ||||||||||||| |||| || ||||||||||||||||||||||| ||||||    
T  4686131 tcaaacctgagacattgagaggagcacactccaaggtctcaagccaacacca 4686182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 25414218 - 25414269
Alignment:
Q  117 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacacca 168  Q
    ||||||||||||| |||| || ||||||||||||||||||||||| ||||||    
T  25414218 tcaaacctgagactttgagaggagcacactccaaggtctcaagccaacacca 25414269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 190
Target Start/End: Original strand, 37980154 - 37980224
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtggatta 190  Q
    ||||||||||||||| || |||||||||||||||| |||||| ||| ||||| | ||||||| ||| ||||    
T  37980154 aacctgagaccttgagaggagcacactccaaggtcccaagccaacatcaccaggccaacccaagtgaatta 37980224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 170
Target Start/End: Original strand, 42281237 - 42281290
Alignment:
Q  117 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacaccacc 170  Q
    |||||||||||||||||| || |||||||| ||||||| |||||| ||||||||    
T  42281237 tcaaacctgagaccttgagaggagcacactacaaggtcccaagccaacaccacc 42281290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 29195157 - 29195098
Alignment:
Q  127 gaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtgg 186  Q
    |||||||| || |||||||||||||||| |||||| ||||||||| | ||||||| ||||    
T  29195157 gaccttgagaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgg 29195098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 171
Target Start/End: Complemental strand, 56410020 - 56409969
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcctacaccacca 171  Q
    ||||||||||||||| || |||||||||||||||| |||||| ||| |||||    
T  56410020 aacctgagaccttgagaggagcacactccaaggtcccaagccaacagcacca 56409969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 47183391 - 47183333
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaac 178  Q
    ||||||||| ||||| || | ||||||||||||||||||||| |||||| || ||||||    
T  47183391 aacctgagatcttgagaggatcacactccaaggtctcaagccaacaccatcaggtcaac 47183333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 249
Target Start/End: Complemental strand, 49803128 - 49803098
Alignment:
Q  219 ctgcaaataagttgtttatccaaacagggcc 249  Q
    |||||||||||||||||||||||||||||||    
T  49803128 ctgcaaataagttgtttatccaaacagggcc 49803098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 255
Target Start/End: Complemental strand, 47399432 - 47399403
Alignment:
Q  226 taagttgtttatccaaacagggccataata 255  Q
    ||||||||||||||||||||||||||||||    
T  47399432 taagttgtttatccaaacagggccataata 47399403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 31141350 - 31141398
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcctacacca 168  Q
    ||||| ||||||||| || |||||||||||||||| ||||| |||||||    
T  31141350 aacctcagaccttgagaggagcacactccaaggtcccaagcttacacca 31141398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 186
Target Start/End: Original strand, 5579237 - 5579307
Alignment:
Q  117 tcaaacctgagaccttgat-agaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtgg 186  Q
    ||||||||||||||||||  || |||||||||||||||| |||||| ||||||||| ||||||||| ||||    
T  5579237 tcaaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggtcaacccaagtgg 5579307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 13585731 - 13585657
Alignment:
Q  97 aaattggcattgggaggatttcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacaccacca 171  Q
    |||||||||  || ||||||| ||||||| |||||||| || |||| ||||||||||||||| |||||| |||||    
T  13585731 aaattggcaccggaaggatttgaaacctgcgaccttgagaggagcaaactccaaggtctcaaacctacatcacca 13585657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 21050151 - 21050193
Alignment:
Q  124 tgagaccttgatagaagcacactccaaggtctcaagcctacac 166  Q
    ||||||||||| || ||||||||||||||||||||||||||||    
T  21050151 tgagaccttgagaggagcacactccaaggtctcaagcctacac 21050193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 33128540 - 33128596
Alignment:
Q  116 ttcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaa 172  Q
    ||||||||||||||| ||| || | ||||||||||||||||||| ||||||| ||||    
T  33128540 ttcaaacctgagaccatgagaggatcacactccaaggtctcaaggctacaccgccaa 33128596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 8677578 - 8677629
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcctacaccacca 171  Q
    |||||||||||| || || ||||| |||| ||||||||||||||||||||||    
T  8677578 aacctgagacctagagaggagcaccctcctaggtctcaagcctacaccacca 8677629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 21035179 - 21035241
Alignment:
Q  124 tgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtgg 186  Q
    |||| |||||| || |||||||||||||||||||||| ||||| || | | ||||||||||||    
T  21035179 tgagtccttgagaggagcacactccaaggtctcaagcttacacaacgaggccaacccatgtgg 21035241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 249
Target Start/End: Complemental strand, 28210351 - 28210321
Alignment:
Q  219 ctgcaaataagttgtttatccaaacagggcc 249  Q
    |||||||||||||||||||||||||||||||    
T  28210351 ctgcaaataagttgtttatccaaacagggcc 28210321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 249
Target Start/End: Complemental strand, 45593444 - 45593414
Alignment:
Q  219 ctgcaaataagttgtttatccaaacagggcc 249  Q
    |||||||||||||||||||||||||||||||    
T  45593444 ctgcaaataagttgtttatccaaacagggcc 45593414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 186
Target Start/End: Original strand, 35328878 - 35328947
Alignment:
Q  117 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtgg 186  Q
    |||||||| | ||||||| |||||||||||| |||||  |||||| ||||||||| | ||||||| ||||    
T  35328878 tcaaacctaaaaccttgagagaagcacactcgaaggttccaagccaacaccaccaggccaacccaagtgg 35328947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 16172990 - 16173056
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtgg 186  Q
    ||||||||||||||| || ||||||||||||||||||||||| |||| |||| | ||||||| ||||    
T  16172990 aacctgagaccttgagaggagcacactccaaggtctcaagccaacactaccaggccaacccaagtgg 16173056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 14656650 - 14656710
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaaccc 180  Q
    ||||||||||||||| || |||| |||||||||||||||||| |||| |||| ||||||||    
T  14656650 aacctgagaccttgagaggagcaaactccaaggtctcaagccaacacaaccaggtcaaccc 14656710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 18351776 - 18351831
Alignment:
Q  116 ttcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacaccacca 171  Q
    ||||||| ||||||||||| | ||||||||| |||||||||||| |||||||||||    
T  18351776 ttcaaacttgagaccttgagacaagcacacttcaaggtctcaagtctacaccacca 18351831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 16247136 - 16247185
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcctacaccac 169  Q
    |||||||||||||||||| |||||||| ||||||| |||||| |||||||    
T  16247136 aacctgagaccttgataggagcacactgcaaggtcccaagccaacaccac 16247185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 19373300 - 19373257
Alignment:
Q  128 accttgatagaagcacactccaaggtctcaagcctacaccacca 171  Q
    ||||||| || ||||||||||||||||||||||| |||||||||    
T  19373300 accttgagagtagcacactccaaggtctcaagccaacaccacca 19373257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 162
Target Start/End: Original strand, 32340319 - 32340385
Alignment:
Q  95 agaaattggcattgggaggatttcaaacctgagaccttgatagaagcacactccaaggtctcaagcct 162  Q
    |||||||||||| || |||||| | ||||| ||||||||| || |||||||||||||||| |||||||    
T  32340319 agaaattggcatcggtaggatt-cgaacctaagaccttgagaggagcacactccaaggtcccaagcct 32340385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 15485426 - 15485467
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcc 161  Q
    ||||||||||||||| || |||||||||||||||| ||||||    
T  15485426 aacctgagaccttgagaggagcacactccaaggtcccaagcc 15485467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 254
Target Start/End: Original strand, 29845069 - 29845097
Alignment:
Q  226 taagttgtttatccaaacagggccataat 254  Q
    |||||||||||||||||||||||||||||    
T  29845069 taagttgtttatccaaacagggccataat 29845097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 34844440 - 34844374
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtgg 186  Q
    ||||||||||||||| || ||||||||||||||||||||||| ||| ||||| | ||||||| ||||    
T  34844440 aacctgagaccttgagaggagcacactccaaggtctcaagccaacaacaccagggcaacccaagtgg 34844374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 42799754 - 42799820
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtgg 186  Q
    ||||||||||||||| || |||||||||||||||| |||||| ||||||||| | ||||||| ||||    
T  42799754 aacctgagaccttgagaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgg 42799820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 10682950 - 10683016
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtgg 186  Q
    |||||||||| |||| |||||||||||||||||||||||||| | ||||| |  |||||||| ||||    
T  10682950 aacctgagactttgagagaagcacactccaaggtctcaagccaataccactagatcaacccaagtgg 10683016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 53167795 - 53167845
Alignment:
Q  117 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacacc 167  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||| |||||    
T  53167795 tcaaacttgagaccttgagagaagcacactccatggtctcaagccaacacc 53167845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 43303830 - 43303766
Alignment:
Q  117 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaaccca 181  Q
    ||||||||||||||| || || ||||| |||||||||||||||||  |||||||| | |||||||    
T  43303830 tcaaacctgagacctggagaggagcacgctccaaggtctcaagccatcaccaccaggccaaccca 43303766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 26158881 - 26158834
Alignment:
Q  119 aaacctgagaccttgatagaagcacactccaaggtctcaagcctacac 166  Q
    |||||||||||||||| || ||||||||||||| ||||||||| ||||    
T  26158881 aaacctgagaccttgagaggagcacactccaagatctcaagccaacac 26158834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 44069831 - 44069776
Alignment:
Q  117 tcaaacctgagaccttgat-agaagcacactccaaggtctcaagcctacaccacca 171  Q
    ||||||||||||||||||  || ||||||||||||| ||||||||| |||||||||    
T  44069831 tcaaacctgagaccttgaggaggagcacactccaagatctcaagccaacaccacca 44069776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 249
Target Start/End: Original strand, 3845736 - 3845766
Alignment:
Q  219 ctgcaaataagttgtttatccaaacagggcc 249  Q
    |||||||||||||||||||||||||||||||    
T  3845736 ctgcaaataagttgtttatccaaacagggcc 3845766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 53863874 - 53863940
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtgg 186  Q
    ||||| ||||||||| || |||||||||||||||| |||||| ||| ||||| | ||||||| ||||    
T  53863874 aacctaagaccttgagaggagcacactccaaggtcccaagccaacatcaccaggacaacccaagtgg 53863940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 15034414 - 15034345
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtggatt 189  Q
    ||||||||||||||| || | ||| |||||||||| |||| | ||||||||| | ||||||| |||||||    
T  15034414 aacctgagaccttgagaggatcaccctccaaggtcccaaggcaacaccaccaggccaacccaagtggatt 15034345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 35623277 - 35623322
Alignment:
Q  124 tgagaccttgatagaagcacactccaaggtctcaagcctacaccac 169  Q
    ||||||||||| || |||||||||||||||| |||||| |||||||    
T  35623277 tgagaccttgagaggagcacactccaaggtcccaagccaacaccac 35623322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 4252528 - 4252572
Alignment:
Q  117 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcc 161  Q
    |||||| ||||||||||| || ||||||||||||| |||||||||    
T  4252528 tcaaacttgagaccttgagaggagcacactccaagatctcaagcc 4252572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 34778807 - 34778753
Alignment:
Q  117 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacaccacca 171  Q
    |||||| ||||||||||| || |||||||| |||||||||||||| |||||||||    
T  34778807 tcaaacttgagaccttgaaaggagcacactgcaaggtctcaagccaacaccacca 34778753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 186
Target Start/End: Original strand, 22268937 - 22269006
Alignment:
Q  117 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtgg 186  Q
    |||||| ||||||||||| |  |||||||||||||||| |||||| ||||||||| | ||||||| ||||    
T  22268937 tcaaacttgagaccttgagaagagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgg 22269006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 40136966 - 40137015
Alignment:
Q  117 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacac 166  Q
    |||||||||||||||||| || |||||||||||||||| |||||| ||||    
T  40136966 tcaaacctgagaccttgagaggagcacactccaaggtcccaagccaacac 40137015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 26688935 - 26688868
Alignment:
Q  120 aacctgagaccttgat-agaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtgg 186  Q
    |||||||||||||||  || |||||||||||||||| |||||| ||||||||| | ||||||| ||||    
T  26688935 aacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgg 26688868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 34236068 - 34236035
Alignment:
Q  219 ctgcaaataagttgtttatccaaacagggccata 252  Q
    |||||||||||||||||||||||||||| |||||    
T  34236068 ctgcaaataagttgtttatccaaacaggaccata 34236035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 43533744 - 43533777
Alignment:
Q  138 aagcacactccaaggtctcaagcctacaccacca 171  Q
    |||||||||||||||||||||||| |||||||||    
T  43533744 aagcacactccaaggtctcaagccaacaccacca 43533777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 38463955 - 38463891
Alignment:
Q  116 ttcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaaccc 180  Q
    |||||||||||||||| || || |||||||||| ||||| ||||||| | |||||| | ||||||    
T  38463955 ttcaaacctgagacctagagaggagcacactcctaggtcccaagccttcgccaccaggccaaccc 38463891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 190
Target Start/End: Original strand, 6691557 - 6691627
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtggatta 190  Q
    ||||||||||||||| || ||||||||||||||||| ||| | ||||||||| | ||||||| || |||||    
T  6691557 aacctgagaccttgagaggagcacactccaaggtctaaagtcaacaccaccaggccaacccaagttgatta 6691627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 3869761 - 3869704
Alignment:
Q  124 tgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaaccca 181  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||| || | |||||||    
T  3869761 tgagaccttgatagaagcacactcgaagatctcaagccaacaccatcaggccaaccca 3869704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 6384009 - 6384056
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcctacacc 167  Q
    ||||||||||||||| || |||||||||||||||| |||||| |||||    
T  6384009 aacctgagaccttgagaggagcacactccaaggtcccaagccaacacc 6384056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 184
Target Start/End: Original strand, 27869695 - 27869781
Alignment:
Q  97 aaattggcattgggaggatttcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgt 184  Q
    ||||||||||| |||||| | ||| ||||||| ||||| || ||||||||| || ||| |||||| | ||||||| ||||||||||||    
T  27869695 aaattggcattaggaggactccaa-cctgagatcttgagaggagcacactctaaagtcccaagcccataccaccaggtcaacccatgt 27869781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000004; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 18825413 - 18825344
Alignment:
Q  117 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaacccatgtgg 186  Q
    |||||| ||||||||||| || |||||||||| ||||| |||||| ||||||||| || |||||| ||||    
T  18825413 tcaaacttgagaccttgagaggagcacactcctaggtcccaagccaacaccaccaggtaaacccaagtgg 18825344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 13747636 - 13747700
Alignment:
Q  116 ttcaaacctgagaccttgatagaagcacactccaaggtctcaagcctacaccaccaagtcaaccc 180  Q
    ||||||||||||||||||  || |||| ||||||||||| |||||| ||||||| ||| ||||||    
T  13747636 ttcaaacctgagaccttgggaggagcatactccaaggtcccaagccaacaccactaagccaaccc 13747700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 9174720 - 9174685
Alignment:
Q  219 ctgcaaataagttgtttatccaaacagggccataat 254  Q
    ||||||||||||||||||||||||||| ||||||||    
T  9174720 ctgcaaataagttgtttatccaaacagagccataat 9174685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 186
Target Start/End: Complemental strand, 30359704 - 30359657
Alignment:
Q  139 agcacactccaaggtctcaagcctacaccaccaagtcaacccatgtgg 186  Q
    |||||||||||||||| |||||| ||||||||||| ||||||| ||||    
T  30359704 agcacactccaaggtcccaagccaacaccaccaagccaacccaagtgg 30359657  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 6099525 - 6099566
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcc 161  Q
    ||||||||||||||| || |||||||||||||||| ||||||    
T  6099525 aacctgagaccttgagaggagcacactccaaggtcccaagcc 6099566  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 7250356 - 7250264
Alignment:
Q  61 ggggcccatttaaaaccaatatggactagcccttagaaattggcattgggaggatttcaaacctgagaccttgatagaagcacactccaaggtc 154  Q
    |||||||||||||| ||| |||| ||||||||   |||||||||   ||||||| | ||||| ||||| ||||| || ||||||||||||||||    
T  7250356 ggggcccatttaaagccattatgaactagcccaccgaaattggctccgggaggaat-caaacttgagatcttgagaggagcacactccaaggtc 7250264  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 11852396 - 11852436
Alignment:
Q  138 aagcacactccaaggtctcaagcctacaccaccaagtcaac 178  Q
    |||||||||||||||||||||| |||||||| ||| |||||    
T  11852396 aagcacactccaaggtctcaagtctacaccatcaaatcaac 11852436  T

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Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 247
Target Start/End: Original strand, 26143804 - 26143832
Alignment:
Q  219 ctgcaaataagttgtttatccaaacaggg 247  Q
    |||||||||||||||||||||||||||||    
T  26143804 ctgcaaataagttgtttatccaaacaggg 26143832  T

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Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 26482162 - 26482114
Alignment:
Q  120 aacctgagaccttgatagaagcacactccaaggtctcaagcctacacca 168  Q
    ||||||||||||||| || |||||||||| ||||| |||||| ||||||    
T  26482162 aacctgagaccttgagaggagcacactcctaggtcccaagccaacacca 26482114  T

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Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 31681119 - 31681071
Alignment:
Q  120 aacctgagaccttgat-agaagcacactccaaggtctcaagcctacacc 167  Q
    |||||||||| ||||  |||||||||||||||||||||||||| |||||    
T  31681119 aacctgagactttgaggagaagcacactccaaggtctcaagccaacacc 31681071  T

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Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 40591248 - 40591204
Alignment:
Q  117 tcaaacctgagaccttgatagaagcacactccaaggtctcaagcc 161  Q
    ||||||||||||| |||| || ||||||||||||| |||||||||    
T  40591248 tcaaacctgagactttgagaggagcacactccaagatctcaagcc 40591204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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