View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12595_low_54 (Length: 253)
Name: NF12595_low_54
Description: NF12595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12595_low_54 |
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Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 37864132 - 37864362
Alignment:
| Q |
8 |
cagcacagaacagaataggattaacaaacacagaactaatgctgacagttgatgacagaataaccaactgctaacaaactttgagttgttacagatgatg |
107 |
Q |
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| T |
37864132 |
cagcacaaaacagaataggattaacaaacacagaactaatgctgacagttgatgacagaataaccaactgctaacaaactttgagttgttacagatgatg |
37864231 |
T |
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| Q |
108 |
attatcctatactctaatacaccccctccaaactcaagttgattaattgaaattcaacactgagtttgctaagaatttctggaaaacaagtgtagaaaac |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37864232 |
attatcctatactctaatacaccccctccaaactcaagttgattaattgaaattcaacactgagtttgctaagaatttctggaaaacaagtgtagaaaac |
37864331 |
T |
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| Q |
208 |
aggtttggtgaaagaatctgctagttgatca |
238 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
37864332 |
aggtttggtgaaagaatctgctagttgatca |
37864362 |
T |
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