View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12595_low_57 (Length: 243)
Name: NF12595_low_57
Description: NF12595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12595_low_57 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 53308942 - 53308706
Alignment:
| Q |
1 |
ctagttgaagatgatgcacctatgatatttttctgtcttctatgatcttgttgccatctttgggggtcaaaactgttcatcatgagtatagttgtgcaaa |
100 |
Q |
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| T |
53308942 |
ctagttgaagatgatgcacctatgatatttttctgtcttctatgatcttgttgccatctttgggggtcaaaactgttcatcatgagtatagttgtgcaaa |
53308843 |
T |
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| Q |
101 |
tttaccaaagaagaggaaatatatgtgcatgtgcagttgtgcactcaagagtcctagtgcaaatggtaattggatgtaactagttaattttgaaactaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
53308842 |
tttaccaaagaagaggaaatatatgtgcatgtgcagttgtgcactcaagagtcctagtgcaaatggtaattggatgtaactagttaattttgaatctaat |
53308743 |
T |
|
| Q |
201 |
tgtaggtagaaatggatcaaaacagaaaagggtttgt |
237 |
Q |
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| T |
53308742 |
tgtaggtagaaatggatcaaaacagaaaagggtttgt |
53308706 |
T |
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