View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12596_high_11 (Length: 250)
Name: NF12596_high_11
Description: NF12596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12596_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 15 - 239
Target Start/End: Complemental strand, 30239625 - 30239401
Alignment:
| Q |
15 |
atcttttcatgacaccgactgaatcaatccaaccctaccatccaattacttgggttgagtttttataccacctatgaccaaactcaccgcatgatatata |
114 |
Q |
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| T |
30239625 |
atcttttcatgacaccgactgaatcaatccaaccctaccatccaattacttgggttgagtttttataccacctatgaccaaactcaccgcatgatatata |
30239526 |
T |
|
| Q |
115 |
atatagtatatagtgctatgtcagtgtccaattcctttgtcattaacaattagcactaaagtaggaaagaccaattttgtctatggtcccaactccaagc |
214 |
Q |
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| T |
30239525 |
atatagtatatagtgctatgtcagtgtccaattcctttgtcattaacaattagcactaaagtaggaaagaccatttttgtctatggtcccaactccaagc |
30239426 |
T |
|
| Q |
215 |
accatccatcactcctatgatctgt |
239 |
Q |
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||||||||||||||||||||||||| |
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| T |
30239425 |
accatccatcactcctatgatctgt |
30239401 |
T |
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