View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12596_low_12 (Length: 320)
Name: NF12596_low_12
Description: NF12596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12596_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 41 - 306
Target Start/End: Original strand, 31993267 - 31993532
Alignment:
| Q |
41 |
gcacagatgttgaacaaatccgacaaatttttcaccaatttagcatatattcaagcccttttcagtgatgagacaattgatactaaaggaaaagggacaa |
140 |
Q |
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| T |
31993267 |
gcacagatattgaacaaatccgacaaatttgtcaccaatttagcatatattcaagcccttttcagtgatgagacaattgatactaaaggaaaagggacaa |
31993366 |
T |
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| Q |
141 |
acttatagtttataacagttaaaattaatatcctagtaagaaatttacgatgaaagagtaagatattaagaccgattaaagttatataaaaaattgaaga |
240 |
Q |
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| T |
31993367 |
acttatagtttataacagttaaaattaatatcctagtaagaaatttacgatgaaagagtaagatattaagaccgattaaagttatataaaaaattgaagt |
31993466 |
T |
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| Q |
241 |
aacccgtgtagccacgcatcaagagacatacttttatatccaagcagcttttatggaatgttgatg |
306 |
Q |
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| T |
31993467 |
aacccctgtagccacgcatcaagagacatacttttatatctaagcagcttttatggaatgttgatg |
31993532 |
T |
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