View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12596_low_15 (Length: 302)
Name: NF12596_low_15
Description: NF12596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12596_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 13 - 283
Target Start/End: Complemental strand, 37029650 - 37029380
Alignment:
| Q |
13 |
cagaattgcatcacaggcaaccatgtagtacacggataaacgacaaggtcggcgaagatcatcgcatactaatgataaggtcaaagtgttgcaccagagt |
112 |
Q |
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| T |
37029650 |
cagaattgcatcacaggcaaccatgtagtacacggataaacgacaaggtcggcgaagatcatcgcatactaatgataaggtcaaagtgttgcaccagagt |
37029551 |
T |
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| Q |
113 |
cttattacttgattcattaataactataatacagaccttcaattcaactggaaacagtatatgtcatcattgttacagctgggggaatctcatcaaaata |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37029550 |
cttattacttgattcattaataactataatacagaccttcaaatcaactggaaacagtatatgtcatcattgttacagctgggggaatctcatcaaaata |
37029451 |
T |
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| Q |
213 |
tctcccctttcaactatataactgaaagaaagacgaactaaacacccatttgactactcttgtgtccccca |
283 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |
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| T |
37029450 |
tctcccctttcaactatataactgaaagaaagacgatctaaacacccatttgactagtcttgtgtccccca |
37029380 |
T |
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