View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12597_high_36 (Length: 234)
Name: NF12597_high_36
Description: NF12597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12597_high_36 |
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Alignment Details
Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 36800462 - 36800534
Alignment:
| Q |
127 |
ggtggtgggagtggttctagttgagtagtggtttggtttggtttttcaacactggaagccatatatatataac |
199 |
Q |
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| T |
36800462 |
ggtggtgggagtggttctagttgagtagtggtttggtttggtttttcaacactggaagccatatatatataac |
36800534 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 36800350 - 36800394
Alignment:
| Q |
15 |
aaggacagagggtgatgaagaagattgcatcattccaaaagaaat |
59 |
Q |
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| T |
36800350 |
aaggacagagggtgatgaagaagattgcatcattccaaaagaaat |
36800394 |
T |
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